Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29581.t1 | XP_013454243.1 | 100 | 112 | 0 | 0 | 1 | 112 | 26 | 137 | 1.10E-57 | 232.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29581.t1 | Q9LMK0 | 87.5 | 112 | 14 | 0 | 1 | 112 | 1 | 112 | 7.7e-55 | 214.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29581.t1 | A0A072UET3 | 100.0 | 112 | 0 | 0 | 1 | 112 | 26 | 137 | 8.2e-58 | 232.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene29581 | 0.828943 | 6.79E-55 | -1.69E-46 |
| MS.gene050320 | MS.gene29581 | 0.858483 | 7.99E-63 | -1.69E-46 |
| MS.gene050752 | MS.gene29581 | 0.809595 | 1.75E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene29581 | 0.857494 | 1.57E-62 | -1.69E-46 |
| MS.gene050916 | MS.gene29581 | 0.808318 | 3.29E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene29581 | 0.801364 | 9.32E-49 | -1.69E-46 |
| MS.gene051063 | MS.gene29581 | 0.818974 | 1.48E-52 | -1.69E-46 |
| MS.gene051330 | MS.gene29581 | 0.869398 | 3.19E-66 | -1.69E-46 |
| MS.gene051746 | MS.gene29581 | 0.861954 | 7.14E-64 | -1.69E-46 |
| MS.gene051748 | MS.gene29581 | 0.870516 | 1.38E-66 | -1.69E-46 |
| MS.gene051756 | MS.gene29581 | 0.823612 | 1.26E-53 | -1.69E-46 |
| MS.gene051850 | MS.gene29581 | 0.841347 | 5.02E-58 | -1.69E-46 |
| MS.gene051903 | MS.gene29581 | 0.904038 | 1.86E-79 | -1.69E-46 |
| MS.gene052133 | MS.gene29581 | 0.814933 | 1.20E-51 | -1.69E-46 |
| MS.gene052947 | MS.gene29581 | 0.850918 | 1.24E-60 | -1.69E-46 |
| MS.gene053109 | MS.gene29581 | 0.844612 | 6.79E-59 | -1.69E-46 |
| MS.gene053952 | MS.gene29581 | 0.805295 | 1.43E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene29581 | 0.810843 | 9.42E-51 | -1.69E-46 |
| MS.gene054937 | MS.gene29581 | 0.805613 | 1.23E-49 | -1.69E-46 |
| MS.gene055424 | MS.gene29581 | 0.812606 | 3.89E-51 | -1.69E-46 |
| MS.gene056075 | MS.gene29581 | 0.854565 | 1.13E-61 | -1.69E-46 |
| MS.gene056631 | MS.gene29581 | 0.841665 | 4.14E-58 | -1.69E-46 |
| MS.gene056896 | MS.gene29581 | 0.818947 | 1.50E-52 | -1.69E-46 |
| MS.gene057094 | MS.gene29581 | 0.894864 | 1.65E-75 | -1.69E-46 |
| MS.gene057206 | MS.gene29581 | 0.80594 | 1.05E-49 | -1.69E-46 |
| MS.gene057234 | MS.gene29581 | 0.820972 | 5.17E-53 | -1.69E-46 |
| MS.gene057705 | MS.gene29581 | 0.806036 | 1.00E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene29581 | 0.807051 | 6.11E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene29581 | 0.849694 | 2.74E-60 | -1.69E-46 |
| MS.gene058906 | MS.gene29581 | 0.812646 | 3.82E-51 | -1.69E-46 |
| MS.gene059227 | MS.gene29581 | 0.828663 | 7.93E-55 | -1.69E-46 |
| MS.gene059726 | MS.gene29581 | 0.812229 | 4.71E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene29581 | 0.886857 | 2.37E-72 | -1.69E-46 |
| MS.gene06011 | MS.gene29581 | 0.813639 | 2.31E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene29581 | 0.801533 | 8.61E-49 | -1.69E-46 |
| MS.gene061145 | MS.gene29581 | 0.802031 | 6.80E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29581 | MS.gene09845 | PPI |
| MS.gene29581 | MS.gene007067 | PPI |
| MS.gene29581 | MS.gene022752 | PPI |
| MS.gene56696 | MS.gene29581 | PPI |
| MS.gene29581 | MS.gene007066 | PPI |
| MS.gene29581 | MS.gene070073 | PPI |
| MS.gene29581 | MS.gene64512 | PPI |
| MS.gene29581 | MS.gene020215 | PPI |
| MS.gene29581 | MS.gene051904 | PPI |
| MS.gene29581 | MS.gene018553 | PPI |
| MS.gene29581 | MS.gene061905 | PPI |
| MS.gene29581 | MS.gene56696 | PPI |
| MS.gene29581 | MS.gene80639 | PPI |
| MS.gene29581 | MS.gene23058 | PPI |
| MS.gene29581 | MS.gene39294 | PPI |
| MS.gene29581 | MS.gene051903 | PPI |
| MS.gene051904 | MS.gene29581 | PPI |
| MS.gene29581 | MS.gene45646 | PPI |
| MS.gene29581 | MS.gene23059 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29581.t1 | MTR_5g081705 | 100.000 | 112 | 0 | 0 | 1 | 112 | 26 | 137 | 1.99e-79 | 229 |
| MS.gene29581.t1 | MTR_0699s0020 | 94.643 | 112 | 6 | 0 | 1 | 112 | 1 | 112 | 3.79e-77 | 223 |
| MS.gene29581.t1 | MTR_0699s0010 | 93.750 | 112 | 7 | 0 | 1 | 112 | 1 | 112 | 1.49e-76 | 221 |
| MS.gene29581.t1 | MTR_5g081705 | 100.000 | 99 | 0 | 0 | 1 | 99 | 26 | 124 | 3.59e-69 | 203 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29581.t1 | AT1G74270 | 88.393 | 112 | 13 | 0 | 1 | 112 | 1 | 112 | 9.66e-73 | 212 |
| MS.gene29581.t1 | AT1G07070 | 87.500 | 112 | 14 | 0 | 1 | 112 | 1 | 112 | 9.87e-73 | 212 |
| MS.gene29581.t1 | AT3G55750 | 89.189 | 111 | 12 | 0 | 2 | 112 | 1 | 111 | 6.67e-72 | 209 |
| MS.gene29581.t1 | AT1G41880 | 88.288 | 111 | 13 | 0 | 2 | 112 | 1 | 111 | 9.58e-72 | 209 |
| MS.gene29581.t1 | AT1G41880 | 88.288 | 111 | 13 | 0 | 2 | 112 | 1 | 111 | 9.58e-72 | 209 |
Find 45 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGAATTACCATTGATTT+TGG | 0.162742 | 5.2:-69758164 | None:intergenic |
| ACACCAATCAAAATGGTTAA+AGG | 0.309838 | 5.2:+69757104 | None:intergenic |
| TACGTCAGGGGTACAGTTCT+TGG | 0.315019 | 5.2:+69757293 | MS.gene29581:CDS |
| GAAGCCACTATCGCTGCATT+TGG | 0.347853 | 5.2:+69758075 | MS.gene29581:CDS |
| ATTTGTTTGTGCAGGGAGCC+AGG | 0.348132 | 5.2:+69758257 | MS.gene29581:intron |
| AAGCCACTATCGCTGCATTT+GGG | 0.372191 | 5.2:+69758076 | MS.gene29581:CDS |
| TTGTAATCAGGCTTTACGTC+AGG | 0.401581 | 5.2:+69757279 | MS.gene29581:intron |
| ATGTATCCAAGCAATATATA+AGG | 0.407008 | 5.2:+69758292 | MS.gene29581:CDS |
| ATCTGAACAAGAGAGGTGTT+TGG | 0.416693 | 5.2:-69757966 | None:intergenic |
| GACGACAAGGAGAACGTATC+AGG | 0.417479 | 5.2:+69757126 | MS.gene29581:CDS |
| GAGGAGGTTGCATGGTATGC+TGG | 0.417733 | 5.2:+69758008 | MS.gene29581:CDS |
| CTATCGCTGCATTTGGGGTA+AGG | 0.428656 | 5.2:+69758082 | MS.gene29581:CDS |
| ACATTACCTTATATATTGCT+TGG | 0.430770 | 5.2:-69758298 | None:intergenic |
| TCTGAACAAGAGAGGTGTTT+GGG | 0.453404 | 5.2:-69757965 | None:intergenic |
| TACCCCAAATGCAGCGATAG+TGG | 0.457668 | 5.2:-69758079 | None:intergenic |
| GTTTGGGTATTGATTTACCT+TGG | 0.466066 | 5.2:-69757949 | None:intergenic |
| ATGGTATGCTGGGAAGAAAT+TGG | 0.469927 | 5.2:+69758019 | MS.gene29581:CDS |
| GCTTCCATCCTTCTTCACCT+TGG | 0.472167 | 5.2:-69758057 | None:intergenic |
| ACCTCTCTTGTTCAGATCGA+GGG | 0.499812 | 5.2:+69757972 | MS.gene29581:CDS |
| GCATTTGGGGTAAGGTTACC+AGG | 0.512393 | 5.2:+69758090 | MS.gene29581:CDS |
| ATACCATGCAACCTCCTCCT+TGG | 0.519241 | 5.2:-69758003 | None:intergenic |
| GCCACTGTTACCATGAGGCC+TGG | 0.523824 | 5.2:-69758108 | None:intergenic |
| AGGAGGTTGCATGGTATGCT+GGG | 0.527652 | 5.2:+69758009 | MS.gene29581:CDS |
| TTTGTTTGTGCAGGGAGCCA+GGG | 0.534698 | 5.2:+69758258 | MS.gene29581:intron |
| TTACAAGGCCAAGGTGAAGA+AGG | 0.537680 | 5.2:+69758049 | MS.gene29581:CDS |
| TAACCTACCACCAAAATCAA+TGG | 0.539094 | 5.2:+69758154 | MS.gene29581:CDS |
| GGCATACATTTACAAGGCCA+AGG | 0.547418 | 5.2:+69758040 | MS.gene29581:CDS |
| TGTAATCAGGCTTTACGTCA+GGG | 0.561952 | 5.2:+69757280 | MS.gene29581:intron |
| GAAATTGGCATACATTTACA+AGG | 0.562532 | 5.2:+69758034 | MS.gene29581:CDS |
| GTAATGTTGTTATAGGTCCA+AGG | 0.573819 | 5.2:+69757932 | MS.gene29581:intron |
| ATACATAAATACTCTAACCC+TGG | 0.583670 | 5.2:-69758275 | None:intergenic |
| GGTAAGGTTACCAGGCCTCA+TGG | 0.585246 | 5.2:+69758098 | MS.gene29581:CDS |
| AAGGCCAAGGTGAAGAAGGA+TGG | 0.591334 | 5.2:+69758053 | MS.gene29581:CDS |
| CACCTCTCTTGTTCAGATCG+AGG | 0.592183 | 5.2:+69757971 | MS.gene29581:CDS |
| ACACCAAGGAGGAGGTTGCA+TGG | 0.606757 | 5.2:+69758000 | MS.gene29581:CDS |
| GTAATCAGGCTTTACGTCAG+GGG | 0.611028 | 5.2:+69757281 | MS.gene29581:intron |
| GGTTAGACTTGAACTTTGCG+CGG | 0.621246 | 5.2:-69758136 | None:intergenic |
| AGCCACTATCGCTGCATTTG+GGG | 0.627011 | 5.2:+69758077 | MS.gene29581:CDS |
| CCTCTCTTGTTCAGATCGAG+GGG | 0.637714 | 5.2:+69757973 | MS.gene29581:CDS |
| GTACAGTTCTTGGATACAAG+AGG | 0.641528 | 5.2:+69757303 | MS.gene29581:CDS |
| CCCCTCGATCTGAACAAGAG+AGG | 0.655801 | 5.2:-69757973 | None:intergenic |
| ACCAGGCCTCATGGTAACAG+TGG | 0.661908 | 5.2:+69758107 | MS.gene29581:CDS |
| AAAATGGTTAAAGGACGACA+AGG | 0.679088 | 5.2:+69757113 | None:intergenic |
| CTCTCTTGTTCAGATCGAGG+GGG | 0.711001 | 5.2:+69757974 | MS.gene29581:CDS |
| ACAATGCCACTGTTACCATG+AGG | 0.746625 | 5.2:-69758113 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGCTAATTAAATCTAATTT+GGG | + | chr5.2:69757415-69757434 | MS.gene29581:intron | 15.0% |
| !! | TAAGCTAATTAAATCTAATT+TGG | + | chr5.2:69757414-69757433 | MS.gene29581:intron | 15.0% |
| !!! | AATTCTTTAAGACATTTAAA+TGG | + | chr5.2:69758178-69758197 | MS.gene29581:intron | 15.0% |
| !!! | ATTTAATTAGCTTAAGATAT+TGG | - | chr5.2:69757408-69757427 | None:intergenic | 15.0% |
| !! | CGGAAAAAAAACTATATATT+TGG | - | chr5.2:69757828-69757847 | None:intergenic | 20.0% |
| !!! | ATATTTTATCAAGGATACAT+TGG | - | chr5.2:69757665-69757684 | None:intergenic | 20.0% |
| !!! | TAAAGAATTACCATTGATTT+TGG | - | chr5.2:69758167-69758186 | None:intergenic | 20.0% |
| !!! | TATTTTATCAAGGATACATT+GGG | - | chr5.2:69757664-69757683 | None:intergenic | 20.0% |
| !!! | TTGGGTATTATATTTTATCA+AGG | - | chr5.2:69757674-69757693 | None:intergenic | 20.0% |
| !!! | TTTGGGTATTATTTTTTGTA+TGG | + | chr5.2:69757769-69757788 | MS.gene29581:intron | 20.0% |
| ! | ACAAACACAAATTAAAAGCT+GGG | - | chr5.2:69757587-69757606 | None:intergenic | 25.0% |
| ! | ATCAAAATCAAGAACTACTA+GGG | - | chr5.2:69757871-69757890 | None:intergenic | 25.0% |
| ! | GATTATTTGTGCTAAGAAAT+TGG | + | chr5.2:69757910-69757929 | MS.gene29581:intron | 25.0% |
| ! | TTAAAAACCAAGACTCAATT+TGG | + | chr5.2:69757618-69757637 | MS.gene29581:intron | 25.0% |
| !! | TTGATTTTGTGTTTGTAATC+AGG | + | chr5.2:69757267-69757286 | MS.gene29581:intron | 25.0% |
| !!! | GAAATTGGTAATGTTGTTAT+AGG | + | chr5.2:69757925-69757944 | MS.gene29581:intron | 25.0% |
| !!! | GACTAAATGATTACTGATTT+GGG | + | chr5.2:69757752-69757771 | MS.gene29581:intron | 25.0% |
| !!! | TTTATGGTTTCTGAAAGTTT+TGG | + | chr5.2:69758229-69758248 | MS.gene29581:intron | 25.0% |
| ATACATAAATACTCTAACCC+TGG | - | chr5.2:69758278-69758297 | None:intergenic | 30.0% | |
| CACAAACACAAATTAAAAGC+TGG | - | chr5.2:69757588-69757607 | None:intergenic | 30.0% | |
| CATCAAAATCAAGAACTACT+AGG | - | chr5.2:69757872-69757891 | None:intergenic | 30.0% | |
| GAAATTGGCATACATTTACA+AGG | + | chr5.2:69758034-69758053 | MS.gene29581:CDS | 30.0% | |
| GCTGTATTTGATGTATTCTT+GGG | + | chr5.2:69757362-69757381 | MS.gene29581:intron | 30.0% | |
| GTTAAACGAAATAGATCGAA+GGG | - | chr5.2:69757164-69757183 | None:intergenic | 30.0% | |
| TGCTGTATTTGATGTATTCT+TGG | + | chr5.2:69757361-69757380 | MS.gene29581:intron | 30.0% | |
| TGTTAAACGAAATAGATCGA+AGG | - | chr5.2:69757165-69757184 | None:intergenic | 30.0% | |
| TTCAGAAACCATAAAACAGT+TGG | - | chr5.2:69758224-69758243 | None:intergenic | 30.0% | |
| ! | GGACTAAATGATTACTGATT+TGG | + | chr5.2:69757751-69757770 | MS.gene29581:intron | 30.0% |
| !! | CTTGATTTTGATGTTGATCT+GGG | + | chr5.2:69757879-69757898 | MS.gene29581:intron | 30.0% |
| !! | TCTTGATTTTGATGTTGATC+TGG | + | chr5.2:69757878-69757897 | MS.gene29581:intron | 30.0% |
| !!! | AGAATTACCATTGATTTTGG+TGG | - | chr5.2:69758164-69758183 | None:intergenic | 30.0% |
| !!! | ATGTTTAATGCTGTTTTAGC+TGG | + | chr5.2:69757502-69757521 | MS.gene29581:intron | 30.0% |
| GTAATGTTGTTATAGGTCCA+AGG | + | chr5.2:69757932-69757951 | MS.gene29581:intron | 35.0% | |
| TAACCTACCACCAAAATCAA+TGG | + | chr5.2:69758154-69758173 | MS.gene29581:CDS | 35.0% | |
| TGAAGACACATTATGTACGA+CGG | - | chr5.2:69757848-69757867 | None:intergenic | 35.0% | |
| TTGGTCCTTCACAATATTTG+CGG | + | chr5.2:69757637-69757656 | MS.gene29581:intron | 35.0% | |
| ! | CCTTTTCACCAACTGTTTTA+TGG | + | chr5.2:69758213-69758232 | MS.gene29581:intron | 35.0% |
| !! | CCATAAAACAGTTGGTGAAA+AGG | - | chr5.2:69758216-69758235 | None:intergenic | 35.0% |
| !! | GTTTGGGTATTGATTTACCT+TGG | - | chr5.2:69757952-69757971 | None:intergenic | 35.0% |
| !!! | TTACCATTGATTTTGGTGGT+AGG | - | chr5.2:69758160-69758179 | None:intergenic | 35.0% |
| ATGGTATGCTGGGAAGAAAT+TGG | + | chr5.2:69758019-69758038 | MS.gene29581:CDS | 40.0% | |
| CCTAGACTCATTATCACAAG+CGG | - | chr5.2:69757733-69757752 | None:intergenic | 40.0% | |
| GTACAGTTCTTGGATACAAG+AGG | + | chr5.2:69757303-69757322 | MS.gene29581:CDS | 40.0% | |
| TGAAGGACCAAATTGAGTCT+TGG | - | chr5.2:69757628-69757647 | None:intergenic | 40.0% | |
| TGGTCCTTCACAATATTTGC+GGG | + | chr5.2:69757638-69757657 | MS.gene29581:intron | 40.0% | |
| TGTAATCAGGCTTTACGTCA+GGG | + | chr5.2:69757280-69757299 | MS.gene29581:intron | 40.0% | |
| TTGTAATCAGGCTTTACGTC+AGG | + | chr5.2:69757279-69757298 | MS.gene29581:intron | 40.0% | |
| !! | ATCTGAACAAGAGAGGTGTT+TGG | - | chr5.2:69757969-69757988 | None:intergenic | 40.0% |
| !! | GATAATGCTGGGACTAGTTT+GGG | - | chr5.2:69757692-69757711 | None:intergenic | 40.0% |
| !! | GGTGTTGATTTGTTTGTGCA+GGG | + | chr5.2:69758250-69758269 | MS.gene29581:intron | 40.0% |
| !! | TCTGAACAAGAGAGGTGTTT+GGG | - | chr5.2:69757968-69757987 | None:intergenic | 40.0% |
| !! | TGATAATGCTGGGACTAGTT+TGG | - | chr5.2:69757693-69757712 | None:intergenic | 40.0% |
| !! | TGGTGTTGATTTGTTTGTGC+AGG | + | chr5.2:69758249-69758268 | MS.gene29581:intron | 40.0% |
| AAGCCACTATCGCTGCATTT+GGG | + | chr5.2:69758076-69758095 | MS.gene29581:CDS | 45.0% | |
| ACAATGCCACTGTTACCATG+AGG | - | chr5.2:69758116-69758135 | None:intergenic | 45.0% | |
| ACCTCTCTTGTTCAGATCGA+GGG | + | chr5.2:69757972-69757991 | MS.gene29581:CDS | 45.0% | |
| GGCATACATTTACAAGGCCA+AGG | + | chr5.2:69758040-69758059 | MS.gene29581:CDS | 45.0% | |
| GGTTAGACTTGAACTTTGCG+CGG | - | chr5.2:69758139-69758158 | None:intergenic | 45.0% | |
| GTAATCAGGCTTTACGTCAG+GGG | + | chr5.2:69757281-69757300 | MS.gene29581:intron | 45.0% | |
| TCCCAGCATTATCACAGTAC+AGG | + | chr5.2:69757699-69757718 | MS.gene29581:intron | 45.0% | |
| TTACAAGGCCAAGGTGAAGA+AGG | + | chr5.2:69758049-69758068 | MS.gene29581:CDS | 45.0% | |
| TTGATGTTGATCTGGGTTGC+TGG | + | chr5.2:69757886-69757905 | MS.gene29581:intron | 45.0% | |
| ! | CCGCTTGTGATAATGAGTCT+AGG | + | chr5.2:69757730-69757749 | MS.gene29581:intron | 45.0% |
| ! | GCCTGTACTGTGATAATGCT+GGG | - | chr5.2:69757703-69757722 | None:intergenic | 45.0% |
| ! | TGCCTGTACTGTGATAATGC+TGG | - | chr5.2:69757704-69757723 | None:intergenic | 45.0% |
| AAGGCCAAGGTGAAGAAGGA+TGG | + | chr5.2:69758053-69758072 | MS.gene29581:CDS | 50.0% | |
| AGCCACTATCGCTGCATTTG+GGG | + | chr5.2:69758077-69758096 | MS.gene29581:CDS | 50.0% | |
| AGGAGGTTGCATGGTATGCT+GGG | + | chr5.2:69758009-69758028 | MS.gene29581:CDS | 50.0% | |
| ATACCATGCAACCTCCTCCT+TGG | - | chr5.2:69758006-69758025 | None:intergenic | 50.0% | |
| ATTTGTTTGTGCAGGGAGCC+AGG | + | chr5.2:69758257-69758276 | MS.gene29581:intron | 50.0% | |
| CACCTCTCTTGTTCAGATCG+AGG | + | chr5.2:69757971-69757990 | MS.gene29581:CDS | 50.0% | |
| CCTCTCTTGTTCAGATCGAG+GGG | + | chr5.2:69757973-69757992 | MS.gene29581:CDS | 50.0% | |
| CTCTCTTGTTCAGATCGAGG+GGG | + | chr5.2:69757974-69757993 | MS.gene29581:CDS | 50.0% | |
| GAAGCCACTATCGCTGCATT+TGG | + | chr5.2:69758075-69758094 | MS.gene29581:CDS | 50.0% | |
| GACGACAAGGAGAACGTATC+AGG | + | chr5.2:69757126-69757145 | MS.gene29581:CDS | 50.0% | |
| GCTTCCATCCTTCTTCACCT+TGG | - | chr5.2:69758060-69758079 | None:intergenic | 50.0% | |
| TACCCCAAATGCAGCGATAG+TGG | - | chr5.2:69758082-69758101 | None:intergenic | 50.0% | |
| TGGGCCCGCAAATATTGTGA+AGG | - | chr5.2:69757645-69757664 | None:intergenic | 50.0% | |
| TTTGTTTGTGCAGGGAGCCA+GGG | + | chr5.2:69758258-69758277 | MS.gene29581:intron | 50.0% | |
| ! | CTATCGCTGCATTTGGGGTA+AGG | + | chr5.2:69758082-69758101 | MS.gene29581:CDS | 50.0% |
| ! | GCATTTGGGGTAAGGTTACC+AGG | + | chr5.2:69758090-69758109 | MS.gene29581:CDS | 50.0% |
| ! | TACGTCAGGGGTACAGTTCT+TGG | + | chr5.2:69757293-69757312 | MS.gene29581:CDS | 50.0% |
| ACACCAAGGAGGAGGTTGCA+TGG | + | chr5.2:69758000-69758019 | MS.gene29581:CDS | 55.0% | |
| ACCAGGCCTCATGGTAACAG+TGG | + | chr5.2:69758107-69758126 | MS.gene29581:CDS | 55.0% | |
| CCCCTCGATCTGAACAAGAG+AGG | - | chr5.2:69757976-69757995 | None:intergenic | 55.0% | |
| GAGGAGGTTGCATGGTATGC+TGG | + | chr5.2:69758008-69758027 | MS.gene29581:CDS | 55.0% | |
| GATCGAGGGGGTAAACACCA+AGG | + | chr5.2:69757986-69758005 | MS.gene29581:CDS | 55.0% | |
| GGTAAGGTTACCAGGCCTCA+TGG | + | chr5.2:69758098-69758117 | MS.gene29581:CDS | 55.0% | |
| CGAGGGGGTAAACACCAAGG+AGG | + | chr5.2:69757989-69758008 | MS.gene29581:CDS | 60.0% | |
| GCCACTGTTACCATGAGGCC+TGG | - | chr5.2:69758111-69758130 | None:intergenic | 60.0% | |
| GGGGGTAAACACCAAGGAGG+AGG | + | chr5.2:69757992-69758011 | MS.gene29581:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 69757116 | 69758312 | 69757116 | ID=MS.gene29581 |
| chr5.2 | mRNA | 69757116 | 69758312 | 69757116 | ID=MS.gene29581.t1;Parent=MS.gene29581 |
| chr5.2 | exon | 69757116 | 69757147 | 69757116 | ID=MS.gene29581.t1.exon1;Parent=MS.gene29581.t1 |
| chr5.2 | CDS | 69757116 | 69757147 | 69757116 | ID=cds.MS.gene29581.t1;Parent=MS.gene29581.t1 |
| chr5.2 | exon | 69757289 | 69757324 | 69757289 | ID=MS.gene29581.t1.exon2;Parent=MS.gene29581.t1 |
| chr5.2 | CDS | 69757289 | 69757324 | 69757289 | ID=cds.MS.gene29581.t1;Parent=MS.gene29581.t1 |
| chr5.2 | exon | 69757947 | 69758175 | 69757947 | ID=MS.gene29581.t1.exon3;Parent=MS.gene29581.t1 |
| chr5.2 | CDS | 69757947 | 69758175 | 69757947 | ID=cds.MS.gene29581.t1;Parent=MS.gene29581.t1 |
| chr5.2 | exon | 69758271 | 69758312 | 69758271 | ID=MS.gene29581.t1.exon4;Parent=MS.gene29581.t1 |
| chr5.2 | CDS | 69758271 | 69758312 | 69758271 | ID=cds.MS.gene29581.t1;Parent=MS.gene29581.t1 |
| Gene Sequence |
| Protein sequence |
