Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29620.t1 | XP_003616603.2 | 92.2 | 422 | 13 | 1 | 1 | 422 | 113 | 514 | 1.30E-215 | 758.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29620.t1 | B8AD72 | 69.4 | 422 | 108 | 2 | 1 | 422 | 143 | 543 | 1.0e-171 | 604.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29620.t1 | G7KGX9 | 92.2 | 422 | 13 | 1 | 1 | 422 | 113 | 514 | 9.5e-216 | 758.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049427 | MS.gene29620 | 0.854058 | 1.58E-61 | -1.69E-46 |
| MS.gene049491 | MS.gene29620 | 0.811586 | 6.50E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene29620 | 0.806152 | 9.45E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene29620 | 0.804794 | 1.82E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene29620 | 0.804821 | 1.80E-49 | -1.69E-46 |
| MS.gene050404 | MS.gene29620 | 0.807248 | 5.54E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene29620 | 0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene29620 | 0.805082 | 1.58E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene29620 | 0.837046 | 6.55E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene29620 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene29620 | 0.817547 | 3.12E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene29620 | 0.836134 | 1.12E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene29620 | 0.802973 | 4.35E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene29620 | 0.814916 | 1.21E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene29620 | 0.837012 | 6.68E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene29620 | 0.803371 | 3.60E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene29620 | 0.832694 | 8.17E-56 | -1.69E-46 |
| MS.gene053322 | MS.gene29620 | 0.810883 | 9.24E-51 | -1.69E-46 |
| MS.gene053330 | MS.gene29620 | 0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene055116 | MS.gene29620 | 0.817389 | 3.38E-52 | -1.69E-46 |
| MS.gene055412 | MS.gene29620 | 0.834701 | 2.57E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene29620 | 0.807836 | 4.16E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene29620 | 0.809621 | 1.73E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene29620 | 0.807615 | 4.64E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene29620 | 0.806417 | 8.31E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene29620 | 0.835786 | 1.37E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene29620 | 0.824637 | 7.25E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene29620 | 0.800083 | 1.70E-48 | -1.69E-46 |
| MS.gene057146 | MS.gene29620 | 0.803728 | 3.04E-49 | -1.69E-46 |
| MS.gene057196 | MS.gene29620 | 0.836581 | 8.61E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene29620 | 0.823609 | 1.26E-53 | -1.69E-46 |
| MS.gene057825 | MS.gene29620 | 0.806635 | 7.47E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene29620 | 0.806577 | 7.69E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene29620 | 0.826027 | 3.40E-54 | -1.69E-46 |
| MS.gene058444 | MS.gene29620 | 0.807995 | 3.85E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene29620 | 0.810586 | 1.07E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene29620 | 0.808408 | 3.14E-50 | -1.69E-46 |
| MS.gene058746 | MS.gene29620 | 0.806423 | 8.29E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene29620 | 0.846841 | 1.69E-59 | -1.69E-46 |
| MS.gene059141 | MS.gene29620 | 0.81388 | 2.05E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene29620 | 0.829553 | 4.83E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene29620 | 0.820714 | 5.93E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene29620 | 0.820741 | 5.84E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene29620 | 0.820287 | 7.43E-53 | -1.69E-46 |
| MS.gene059858 | MS.gene29620 | 0.808361 | 3.22E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene29620 | 0.809448 | 1.88E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene29620 | 0.815333 | 9.76E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene29620 | 0.807865 | 4.10E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene29620 | 0.806767 | 7.01E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene29620 | 0.803355 | 3.63E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene29620 | 0.801211 | 1.00E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29620.t1 | MTR_5g082260 | 92.180 | 422 | 13 | 1 | 1 | 422 | 113 | 514 | 0.0 | 757 |
| MS.gene29620.t1 | MTR_7g086430 | 30.913 | 427 | 259 | 9 | 3 | 409 | 115 | 525 | 3.34e-45 | 164 |
| MS.gene29620.t1 | MTR_7g086430 | 30.645 | 310 | 179 | 9 | 3 | 292 | 115 | 408 | 7.42e-29 | 117 |
| MS.gene29620.t1 | MTR_4g010130 | 26.196 | 439 | 265 | 12 | 4 | 409 | 133 | 545 | 3.04e-24 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29620.t1 | AT5G05740 | 71.602 | 412 | 97 | 1 | 3 | 414 | 123 | 514 | 0.0 | 592 |
| MS.gene29620.t1 | AT5G05740 | 71.602 | 412 | 97 | 1 | 3 | 414 | 126 | 517 | 0.0 | 592 |
| MS.gene29620.t1 | AT5G05740 | 66.893 | 441 | 97 | 2 | 3 | 414 | 126 | 546 | 0.0 | 577 |
| MS.gene29620.t1 | AT5G35220 | 31.218 | 394 | 261 | 4 | 26 | 409 | 138 | 531 | 2.12e-48 | 173 |
| MS.gene29620.t1 | AT1G17870 | 25.740 | 439 | 267 | 12 | 4 | 409 | 140 | 552 | 1.16e-19 | 91.7 |
| MS.gene29620.t1 | AT5G35210 | 39.316 | 117 | 68 | 1 | 218 | 331 | 1545 | 1661 | 1.81e-15 | 79.3 |
Find 103 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGGGTTTCATCTATAAA+TGG | 0.131698 | 5.1:-64446151 | None:intergenic |
| GGTCTTGTTCTTCTGCTTCT+AGG | 0.158404 | 5.1:+64444068 | MS.gene29620:CDS |
| CAATAAATCGGATTGCAAAT+TGG | 0.198787 | 5.1:-64443032 | None:intergenic |
| TTCATACTCTATTATCTCTT+AGG | 0.212331 | 5.1:+64443086 | MS.gene29620:CDS |
| CAAGCTTAACTCCAAGGTTT+TGG | 0.213368 | 5.1:-64443531 | None:intergenic |
| TGACAATCTGAATTTGTTAA+AGG | 0.219792 | 5.1:+64443438 | MS.gene29620:CDS |
| TCATCTGATAGAGGAGAAAT+TGG | 0.248471 | 5.1:-64446043 | None:intergenic |
| ACAAGAGGGTTGATAGAAAT+TGG | 0.269455 | 5.1:-64444373 | None:intergenic |
| CATTTGTTATAGGATAAATT+TGG | 0.280363 | 5.1:+64442751 | MS.gene29620:intron |
| CTATCAACCCTCTTGTGATC+TGG | 0.284156 | 5.1:+64444380 | MS.gene29620:CDS |
| CTTGTTACTGCACTTATTAT+CGG | 0.320323 | 5.1:+64443478 | MS.gene29620:CDS |
| ACCCTCTTGTGATCTGGGCT+TGG | 0.322194 | 5.1:+64444386 | MS.gene29620:CDS |
| AATAAATCGGATTGCAAATT+GGG | 0.335906 | 5.1:-64443031 | None:intergenic |
| CCCTCTTGTGATCTGGGCTT+GGG | 0.337951 | 5.1:+64444387 | MS.gene29620:CDS |
| TGGTGGCAGATAGGCTCTTT+TGG | 0.338317 | 5.1:+64443957 | MS.gene29620:intron |
| CATCCTCAGGATTGACTAGA+AGG | 0.346366 | 5.1:-64442792 | None:intergenic |
| TGGTTTGGTGCTGCGTCTTT+TGG | 0.348500 | 5.1:+64442972 | MS.gene29620:CDS |
| TATCAACCCTCTTGTGATCT+GGG | 0.351252 | 5.1:+64444381 | MS.gene29620:CDS |
| TCATACTCTATTATCTCTTA+GGG | 0.357330 | 5.1:+64443087 | MS.gene29620:CDS |
| TCTGGTTGTAAAGTAGTTCT+TGG | 0.370039 | 5.1:-64442838 | None:intergenic |
| GCAGCTGCTGGACCAATTGC+CGG | 0.374813 | 5.1:+64444035 | MS.gene29620:CDS |
| TTGTTAAAGGATGGCCTACC+TGG | 0.381827 | 5.1:+64443451 | MS.gene29620:CDS |
| TCCCTAACAGCCTCAACAAC+TGG | 0.384146 | 5.1:+64442385 | MS.gene29620:intron |
| TTGTTACTGCACTTATTATC+GGG | 0.385893 | 5.1:+64443479 | MS.gene29620:CDS |
| CGATACCTTTCTTCCCCATA+TGG | 0.388554 | 5.1:-64444479 | None:intergenic |
| CCAATTGCCGGATTTGCATT+GGG | 0.393078 | 5.1:+64444047 | MS.gene29620:CDS |
| ATAAATTTGGAGATGAATAC+AGG | 0.402996 | 5.1:+64442764 | MS.gene29620:CDS |
| CAAGGGTTTCATCTATAAAT+GGG | 0.405206 | 5.1:-64446150 | None:intergenic |
| TTGCTCAAGATTGCAGCTGC+TGG | 0.406860 | 5.1:+64444023 | MS.gene29620:CDS |
| AACAAGACCCAATGCAAATC+CGG | 0.416938 | 5.1:-64444054 | None:intergenic |
| ACCAATTGCCGGATTTGCAT+TGG | 0.418392 | 5.1:+64444046 | MS.gene29620:CDS |
| TTAATGATGTAGCTTTCTAC+TGG | 0.420976 | 5.1:+64445990 | MS.gene29620:CDS |
| CTTGTGATCTGGGCTTGGGC+AGG | 0.421611 | 5.1:+64444391 | MS.gene29620:CDS |
| CACACACCTCGTAAGGATCT+TGG | 0.435624 | 5.1:-64442490 | None:intergenic |
| CAGGCTTCAATTCGCTTCAC+AGG | 0.436252 | 5.1:+64445932 | MS.gene29620:intron |
| CCCAATGCAAATCCGGCAAT+TGG | 0.439644 | 5.1:-64444047 | None:intergenic |
| TCCAGCGGGAATACTGTTGA+TGG | 0.441942 | 5.1:-64444428 | None:intergenic |
| TCCCGTACTTTGTTCCTAGC+TGG | 0.456423 | 5.1:+64443557 | MS.gene29620:CDS |
| GTACTTTGTTCCTAGCTGGC+AGG | 0.463565 | 5.1:+64443561 | MS.gene29620:CDS |
| CTTGGAACGACAACGGCCAC+TGG | 0.467933 | 5.1:-64442820 | None:intergenic |
| TCATTTCTAGCTGGCGGCAT+TGG | 0.472509 | 5.1:+64444152 | MS.gene29620:CDS |
| CAAAACCTTGGAGTTAAGCT+TGG | 0.474152 | 5.1:+64443532 | MS.gene29620:CDS |
| TTAGCTGTACCTGAGTGGTT+TGG | 0.476022 | 5.1:+64442957 | MS.gene29620:intron |
| TCAGTTATTTCATCTGATAG+AGG | 0.476396 | 5.1:-64446052 | None:intergenic |
| TTTCTAGTTGCCCAAAACCT+TGG | 0.479583 | 5.1:+64443520 | MS.gene29620:CDS |
| GAGTATGAAGTGACAAGAAA+AGG | 0.480712 | 5.1:-64443072 | None:intergenic |
| AAGTAAGTACGAGTTGTCTC+TGG | 0.481786 | 5.1:-64442856 | None:intergenic |
| GCCACTGGCTTATCATCCTC+AGG | 0.483050 | 5.1:-64442805 | None:intergenic |
| TCTATAAATGGGAAAGGGTA+TGG | 0.488120 | 5.1:-64446139 | None:intergenic |
| TGCCAGCTAGGAACAAAGTA+CGG | 0.492497 | 5.1:-64443559 | None:intergenic |
| ATTCCCGCTGGAGAAATTGA+TGG | 0.493577 | 5.1:+64444439 | MS.gene29620:CDS |
| GCCAGTGGATCACCTCTGCC+AGG | 0.499435 | 5.1:+64442257 | MS.gene29620:CDS |
| CTGATATTCTTCTTGCAAAG+AGG | 0.500793 | 5.1:+64446019 | MS.gene29620:CDS |
| AGAGCAACATACTTGTCATC+AGG | 0.510930 | 5.1:-64446076 | None:intergenic |
| CGATAATAAGTGCAGTAACA+AGG | 0.511270 | 5.1:-64443477 | None:intergenic |
| ATTATCGGGGTACATGAACT+TGG | 0.511624 | 5.1:+64443493 | MS.gene29620:CDS |
| CCTCCATCAATTTCTCCAGC+GGG | 0.528767 | 5.1:-64444442 | None:intergenic |
| CTTGGTAACGTTCTCAAGGA+AGG | 0.529950 | 5.1:+64444346 | MS.gene29620:CDS |
| AATCTGAATTTGTTAAAGGA+TGG | 0.531461 | 5.1:+64443442 | MS.gene29620:CDS |
| TATCATACAACCTGCCAGCT+AGG | 0.533569 | 5.1:-64443571 | None:intergenic |
| ATACCTCCAAGTGACGGTAT+TGG | 0.534054 | 5.1:+64444098 | MS.gene29620:CDS |
| AGATAGGCACACACCTCGTA+AGG | 0.537678 | 5.1:-64442497 | None:intergenic |
| TGGGACATTGCGAAGCAGTA+AGG | 0.539750 | 5.1:-64443012 | None:intergenic |
| ATTACATCATCCAGTTGTTG+AGG | 0.540848 | 5.1:-64442395 | None:intergenic |
| AGTGCAGTAACAAGGGCTCC+AGG | 0.541596 | 5.1:-64443469 | None:intergenic |
| TTTCACGAGTCATTTCTAGC+TGG | 0.544995 | 5.1:+64444143 | MS.gene29620:CDS |
| TTTCATCTATAAATGGGAAA+GGG | 0.545765 | 5.1:-64446144 | None:intergenic |
| GTTTCATCTATAAATGGGAA+AGG | 0.548267 | 5.1:-64446145 | None:intergenic |
| CACGAGTCATTTCTAGCTGG+CGG | 0.551293 | 5.1:+64444146 | MS.gene29620:CDS |
| CCCTCCATCAATTTCTCCAG+CGG | 0.559231 | 5.1:-64444443 | None:intergenic |
| ATCACCTCTGCCAGGTGTGA+AGG | 0.562627 | 5.1:+64442265 | MS.gene29620:CDS |
| ACCTGGCAGAGGTGATCCAC+TGG | 0.563174 | 5.1:-64442258 | None:intergenic |
| GTTTCTTGGTAACGTTCTCA+AGG | 0.570500 | 5.1:+64444342 | MS.gene29620:CDS |
| GCCATCAACAGTATTCCCGC+TGG | 0.575199 | 5.1:+64444427 | MS.gene29620:CDS |
| GCCAGCTAGGAACAAAGTAC+GGG | 0.582312 | 5.1:-64443558 | None:intergenic |
| ACACCAATACCGTCACTTGG+AGG | 0.583153 | 5.1:-64444101 | None:intergenic |
| AATATAATCACCTTCACACC+TGG | 0.583486 | 5.1:-64442275 | None:intergenic |
| GATGACAAGTATGTTGCTCT+CGG | 0.586737 | 5.1:+64446079 | MS.gene29620:CDS |
| TGTTACTGCACTTATTATCG+GGG | 0.591294 | 5.1:+64443480 | MS.gene29620:CDS |
| ATCACCTTCACACCTGGCAG+AGG | 0.594663 | 5.1:-64442269 | None:intergenic |
| ACAACACCAATACCGTCACT+TGG | 0.597252 | 5.1:-64444104 | None:intergenic |
| GATAATAAGTGCAGTAACAA+GGG | 0.601874 | 5.1:-64443476 | None:intergenic |
| ACTGTTTCTAGAAACTTGCA+AGG | 0.605257 | 5.1:-64446168 | None:intergenic |
| GGACTCCAAGCTTAACTCCA+AGG | 0.609370 | 5.1:-64443537 | None:intergenic |
| GCCCAAGCCCAGATCACAAG+AGG | 0.612324 | 5.1:-64444388 | None:intergenic |
| TAGGGTGGAGTGCTATTCAA+AGG | 0.612392 | 5.1:+64442588 | MS.gene29620:intron |
| CCCGCTGGAGAAATTGATGG+AGG | 0.614785 | 5.1:+64444442 | MS.gene29620:CDS |
| TTTCCTTCTAGTCAATCCTG+AGG | 0.617367 | 5.1:+64442789 | MS.gene29620:CDS |
| CCGCTGGAGAAATTGATGGA+GGG | 0.622971 | 5.1:+64444443 | MS.gene29620:CDS |
| CTGTTTCTAGAAACTTGCAA+GGG | 0.625123 | 5.1:-64446167 | None:intergenic |
| CATACTCTATTATCTCTTAG+GGG | 0.625213 | 5.1:+64443088 | MS.gene29620:CDS |
| TAATGATGTAGCTTTCTACT+GGG | 0.625802 | 5.1:+64445991 | MS.gene29620:CDS |
| CAGTAACAAGGGCTCCAGGT+AGG | 0.628013 | 5.1:-64443465 | None:intergenic |
| TTTGTTATACCTCCAAGTGA+CGG | 0.635773 | 5.1:+64444092 | MS.gene29620:CDS |
| GACGCAGCACCAAACCACTC+AGG | 0.637018 | 5.1:-64442966 | None:intergenic |
| TCCTGAGGATGATAAGCCAG+TGG | 0.661607 | 5.1:+64442804 | MS.gene29620:CDS |
| TACTGTTGATGGCATTGATG+AGG | 0.664732 | 5.1:-64444417 | None:intergenic |
| CTATTCAAAGGAAACCTGCG+AGG | 0.678472 | 5.1:+64442600 | MS.gene29620:CDS |
| AGTAGTTCTTGGAACGACAA+CGG | 0.680756 | 5.1:-64442827 | None:intergenic |
| CCCAAGCCCAGATCACAAGA+GGG | 0.683801 | 5.1:-64444387 | None:intergenic |
| GATAACATAGAAGTTGCCAG+TGG | 0.714256 | 5.1:+64442242 | MS.gene29620:CDS |
| TATTCAAAGGAAACCTGCGA+GGG | 0.723688 | 5.1:+64442601 | MS.gene29620:CDS |
| AACAAGCCAAGATCCTTACG+AGG | 0.757784 | 5.1:+64442484 | MS.gene29620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGTTTATATTTTATTGA+AGG | - | chr5.1:64443733-64443752 | None:intergenic | 10.0% |
| !! | ATAAAATATAAACTATTCAG+AGG | + | chr5.1:64443736-64443755 | MS.gene29620:intron | 15.0% |
| !! | GTTTCTTAAATAATACTATT+AGG | + | chr5.1:64445724-64445743 | MS.gene29620:intron | 15.0% |
| !! | TTCAAATTATCATTAAACTT+TGG | - | chr5.1:64444601-64444620 | None:intergenic | 15.0% |
| !! | TTTACATGATATATATTAGA+TGG | - | chr5.1:64443698-64443717 | None:intergenic | 15.0% |
| !!! | TACAAAAATATTGATCTTTT+AGG | + | chr5.1:64443229-64443248 | MS.gene29620:intron | 15.0% |
| !! | AACATAAGAGATATGAAAAA+AGG | - | chr5.1:64442335-64442354 | None:intergenic | 20.0% |
| !! | AGATTCAAATTGACAAAATT+TGG | + | chr5.1:64443839-64443858 | MS.gene29620:intron | 20.0% |
| !! | CAACATTAATATGTTGAAAA+AGG | + | chr5.1:64444811-64444830 | MS.gene29620:intron | 20.0% |
| !! | CCACATAATTTAATATGTTA+TGG | + | chr5.1:64443806-64443825 | MS.gene29620:intron | 20.0% |
| !! | CCATAACATATTAAATTATG+TGG | - | chr5.1:64443809-64443828 | None:intergenic | 20.0% |
| !! | GATGCATATAATAAACTTTA+GGG | + | chr5.1:64443758-64443777 | MS.gene29620:intron | 20.0% |
| !! | TAAGAAATGAAACAGAAATA+TGG | - | chr5.1:64442674-64442693 | None:intergenic | 20.0% |
| !! | TATTAGGATATTTAATTGAG+TGG | + | chr5.1:64445740-64445759 | MS.gene29620:intron | 20.0% |
| !! | TTACACATAAAAAGAAGTAA+AGG | - | chr5.1:64445889-64445908 | None:intergenic | 20.0% |
| !!! | AAAAAGTTTTTAAATCTTGG+TGG | + | chr5.1:64445602-64445621 | MS.gene29620:intron | 20.0% |
| !!! | AGAAATTTTGATGCTTAATT+TGG | + | chr5.1:64443937-64443956 | MS.gene29620:intron | 20.0% |
| !!! | ATTTAAAAACTTTTTGTGGA+GGG | - | chr5.1:64445597-64445616 | None:intergenic | 20.0% |
| !!! | CAAGATTTAAAAACTTTTTG+TGG | - | chr5.1:64445601-64445620 | None:intergenic | 20.0% |
| !!! | CACAAAAAGTTTTTAAATCT+TGG | + | chr5.1:64445599-64445618 | MS.gene29620:intron | 20.0% |
| !!! | CATTTGTTATAGGATAAATT+TGG | + | chr5.1:64442751-64442770 | MS.gene29620:intron | 20.0% |
| !!! | GAACATCAACAATAATATTT+TGG | - | chr5.1:64443406-64443425 | None:intergenic | 20.0% |
| !!! | TATAGTTTATTGTTATTGCT+TGG | + | chr5.1:64445025-64445044 | MS.gene29620:intron | 20.0% |
| !!! | TTCTTTTTATTTTCTACTCA+TGG | + | chr5.1:64442907-64442926 | MS.gene29620:intron | 20.0% |
| ! | AAACTAAATAGAGGAAAGAT+AGG | - | chr5.1:64442516-64442535 | None:intergenic | 25.0% |
| ! | AAATGTATATTCATACATGC+AGG | - | chr5.1:64445785-64445804 | None:intergenic | 25.0% |
| ! | AATAAATCGGATTGCAAATT+GGG | - | chr5.1:64443034-64443053 | None:intergenic | 25.0% |
| ! | ACATAAAAAGAAGTAAAGGA+AGG | - | chr5.1:64445885-64445904 | None:intergenic | 25.0% |
| ! | ATAAATTTGGAGATGAATAC+AGG | + | chr5.1:64442764-64442783 | MS.gene29620:CDS | 25.0% |
| ! | ATCCTTAAAAATCAAGTGTT+TGG | + | chr5.1:64442443-64442462 | MS.gene29620:CDS | 25.0% |
| ! | ATTATGTGGTTTGAAAAAAC+AGG | - | chr5.1:64443795-64443814 | None:intergenic | 25.0% |
| ! | ATTCCTTCAAGTAAATTTCA+AGG | + | chr5.1:64443179-64443198 | MS.gene29620:intron | 25.0% |
| ! | CAAAATAATAGCTCCAAATT+TGG | + | chr5.1:64444856-64444875 | MS.gene29620:intron | 25.0% |
| ! | GAAAAATGCTCACAATAAAT+CGG | - | chr5.1:64443047-64443066 | None:intergenic | 25.0% |
| ! | GAATAATGTCATCTTTGAAT+CGG | - | chr5.1:64444930-64444949 | None:intergenic | 25.0% |
| ! | GCATATGAAAAACTAAATAG+AGG | - | chr5.1:64442525-64442544 | None:intergenic | 25.0% |
| ! | GGATGCATATAATAAACTTT+AGG | + | chr5.1:64443757-64443776 | MS.gene29620:intron | 25.0% |
| ! | GTATGATTTATTCCTATGAA+AGG | - | chr5.1:64443321-64443340 | None:intergenic | 25.0% |
| ! | TATCCTTGAAATTTACTTGA+AGG | - | chr5.1:64443185-64443204 | None:intergenic | 25.0% |
| ! | TCATACTCTATTATCTCTTA+GGG | + | chr5.1:64443087-64443106 | MS.gene29620:CDS | 25.0% |
| ! | TGAAATAACACTCATTAATC+TGG | - | chr5.1:64445345-64445364 | None:intergenic | 25.0% |
| ! | TGATGTAATAAAAATTCCCA+AGG | + | chr5.1:64442409-64442428 | MS.gene29620:CDS | 25.0% |
| ! | TTCAATATTTCCTATGTTAG+AGG | + | chr5.1:64442303-64442322 | MS.gene29620:intron | 25.0% |
| ! | TTCATACTCTATTATCTCTT+AGG | + | chr5.1:64443086-64443105 | MS.gene29620:CDS | 25.0% |
| ! | TTTCATCTATAAATGGGAAA+GGG | - | chr5.1:64446147-64446166 | None:intergenic | 25.0% |
| !! | AGGCTTTATGTTTATTTAAC+AGG | + | chr5.1:64443249-64443268 | MS.gene29620:intron | 25.0% |
| !! | CATATAATAAACTTTAGGGA+TGG | + | chr5.1:64443762-64443781 | MS.gene29620:intron | 25.0% |
| !! | GATTTAAAAACTTTTTGTGG+AGG | - | chr5.1:64445598-64445617 | None:intergenic | 25.0% |
| !!! | AATATTTTTGTACCCAAACA+TGG | - | chr5.1:64443221-64443240 | None:intergenic | 25.0% |
| !!! | AATCTGAATTTGTTAAAGGA+TGG | + | chr5.1:64443442-64443461 | MS.gene29620:CDS | 25.0% |
| !!! | AATTTTGATGCTTAATTTGG+TGG | + | chr5.1:64443940-64443959 | MS.gene29620:intron | 25.0% |
| !!! | AGTATCGATTTTATCTCAAA+TGG | - | chr5.1:64444558-64444577 | None:intergenic | 25.0% |
| !!! | ATCTGCATAACATTTGTTAT+AGG | + | chr5.1:64442741-64442760 | MS.gene29620:intron | 25.0% |
| !!! | TGACAATCTGAATTTGTTAA+AGG | + | chr5.1:64443438-64443457 | MS.gene29620:CDS | 25.0% |
| !!! | TTAGTTTTTCATATGCTCAA+AGG | + | chr5.1:64442529-64442548 | MS.gene29620:intron | 25.0% |
| !!! | TTATTTTGATCTTGACTCTT+AGG | + | chr5.1:64444515-64444534 | MS.gene29620:intron | 25.0% |
| AAGGAAGGCAATGATATAAA+TGG | - | chr5.1:64445870-64445889 | None:intergenic | 30.0% | |
| ACTTAACTCCTTCAAAATTG+TGG | + | chr5.1:64442875-64442894 | MS.gene29620:intron | 30.0% | |
| AGTTATGAGTGCTTATGAAA+AGG | - | chr5.1:64445649-64445668 | None:intergenic | 30.0% | |
| CAAGGGTTTCATCTATAAAT+GGG | - | chr5.1:64446153-64446172 | None:intergenic | 30.0% | |
| CAAGTGAATGAAACCAAATT+TGG | - | chr5.1:64444872-64444891 | None:intergenic | 30.0% | |
| CAATAAATCGGATTGCAAAT+TGG | - | chr5.1:64443035-64443054 | None:intergenic | 30.0% | |
| CATAACTGTAAATGTCCAAT+TGG | + | chr5.1:64445662-64445681 | MS.gene29620:intron | 30.0% | |
| CATACTCTATTATCTCTTAG+GGG | + | chr5.1:64443088-64443107 | MS.gene29620:CDS | 30.0% | |
| CTAACTTAAGTCTATTTCAC+AGG | + | chr5.1:64445913-64445932 | MS.gene29620:intron | 30.0% | |
| CTTGTTACTGCACTTATTAT+CGG | + | chr5.1:64443478-64443497 | MS.gene29620:CDS | 30.0% | |
| CTTTATGAACATCAAAAGCT+TGG | + | chr5.1:64445002-64445021 | MS.gene29620:intron | 30.0% | |
| GAAAAATGGTGGCTAAAATA+TGG | - | chr5.1:64445445-64445464 | None:intergenic | 30.0% | |
| GATAATAAGTGCAGTAACAA+GGG | - | chr5.1:64443479-64443498 | None:intergenic | 30.0% | |
| GTTTCATCTATAAATGGGAA+AGG | - | chr5.1:64446148-64446167 | None:intergenic | 30.0% | |
| TAATGATGTAGCTTTCTACT+GGG | + | chr5.1:64445991-64446010 | MS.gene29620:CDS | 30.0% | |
| TATTAAATGTGATGACTGAG+TGG | - | chr5.1:64444629-64444648 | None:intergenic | 30.0% | |
| TCCTAACAAATACCATGTTT+GGG | + | chr5.1:64443206-64443225 | MS.gene29620:intron | 30.0% | |
| TGATTTATTCCTATGAAAGG+TGG | - | chr5.1:64443318-64443337 | None:intergenic | 30.0% | |
| TTAATGATGTAGCTTTCTAC+TGG | + | chr5.1:64445990-64446009 | MS.gene29620:CDS | 30.0% | |
| TTAATGTTGTGTGTCTAAAG+AGG | - | chr5.1:64444800-64444819 | None:intergenic | 30.0% | |
| TTGTTACTGCACTTATTATC+GGG | + | chr5.1:64443479-64443498 | MS.gene29620:CDS | 30.0% | |
| TTTAAGCTTGCATTCATTTG+TGG | + | chr5.1:64444217-64444236 | MS.gene29620:intron | 30.0% | |
| ! | AAAAGTGAAACATGATTTGC+CGG | + | chr5.1:64444666-64444685 | MS.gene29620:intron | 30.0% |
| ! | ACAATGATCCACAATTTTGA+AGG | - | chr5.1:64442886-64442905 | None:intergenic | 30.0% |
| ! | AGAATTTCTTTTGCCATATG+GGG | + | chr5.1:64444466-64444485 | MS.gene29620:CDS | 30.0% |
| ! | AGCCAAACACTTGATTTTTA+AGG | - | chr5.1:64442448-64442467 | None:intergenic | 30.0% |
| ! | CAAGCTTTTGATGTTCATAA+AGG | - | chr5.1:64445004-64445023 | None:intergenic | 30.0% |
| ! | CATATCATAGATGCATTTTG+AGG | + | chr5.1:64443375-64443394 | MS.gene29620:intron | 30.0% |
| ! | CTATGGTTCTATATAGTCTA+TGG | - | chr5.1:64445322-64445341 | None:intergenic | 30.0% |
| ! | CTTTGAATCGGATTCTAAAA+TGG | - | chr5.1:64444918-64444937 | None:intergenic | 30.0% |
| ! | GAGAATTTCTTTTGCCATAT+GGG | + | chr5.1:64444465-64444484 | MS.gene29620:CDS | 30.0% |
| ! | GTTCAGAAGTTATTTCAACA+TGG | - | chr5.1:64442716-64442735 | None:intergenic | 30.0% |
| ! | TCAGTTATTTCATCTGATAG+AGG | - | chr5.1:64446055-64446074 | None:intergenic | 30.0% |
| !! | GTTTTAGCAAGATTGTTTCT+TGG | + | chr5.1:64444328-64444347 | MS.gene29620:intron | 30.0% |
| !!! | AAGGATTTCGATTTTTTCCT+TGG | - | chr5.1:64442429-64442448 | None:intergenic | 30.0% |
| !!! | AGGATTTCGATTTTTTCCTT+GGG | - | chr5.1:64442428-64442447 | None:intergenic | 30.0% |
| !!! | TGGTATTGGTCAATTTGTTT+TGG | + | chr5.1:64443877-64443896 | MS.gene29620:intron | 30.0% |
| AAAACAAGAGTGAGAGACAA+AGG | - | chr5.1:64445551-64445570 | None:intergenic | 35.0% | |
| AAACAAGAGTGAGAGACAAA+GGG | - | chr5.1:64445550-64445569 | None:intergenic | 35.0% | |
| AACACTCATTAATCTGGCTA+TGG | - | chr5.1:64445339-64445358 | None:intergenic | 35.0% | |
| AACTGTAAATGTCCAATTGG+AGG | + | chr5.1:64445665-64445684 | MS.gene29620:intron | 35.0% | |
| AATATAATCACCTTCACACC+TGG | - | chr5.1:64442278-64442297 | None:intergenic | 35.0% | |
| AATTCTGTTCCACCTTTCAT+AGG | + | chr5.1:64443306-64443325 | MS.gene29620:intron | 35.0% | |
| ACCCAAACATGGTATTTGTT+AGG | - | chr5.1:64443210-64443229 | None:intergenic | 35.0% | |
| AGTTGCTCATAACCTTGTTA+GGG | - | chr5.1:64444766-64444785 | None:intergenic | 35.0% | |
| ATCTCAAATGGAACAACCAT+TGG | - | chr5.1:64444546-64444565 | None:intergenic | 35.0% | |
| ATTACATCATCCAGTTGTTG+AGG | - | chr5.1:64442398-64442417 | None:intergenic | 35.0% | |
| CATTTAATCCAAACAGCTCT+CGG | + | chr5.1:64445129-64445148 | MS.gene29620:intron | 35.0% | |
| CGATAATAAGTGCAGTAACA+AGG | - | chr5.1:64443480-64443499 | None:intergenic | 35.0% | |
| CTCGAGAGGATAAAAGAATT+TGG | - | chr5.1:64445698-64445717 | None:intergenic | 35.0% | |
| CTGATATTCTTCTTGCAAAG+AGG | + | chr5.1:64446019-64446038 | MS.gene29620:CDS | 35.0% | |
| GAGTATGAAGTGACAAGAAA+AGG | - | chr5.1:64443075-64443094 | None:intergenic | 35.0% | |
| GATCCTATTCGTATGTCTTT+CGG | - | chr5.1:64444705-64444724 | None:intergenic | 35.0% | |
| GCAAGGGTTTCATCTATAAA+TGG | - | chr5.1:64446154-64446173 | None:intergenic | 35.0% | |
| GTCCTAACAAATACCATGTT+TGG | + | chr5.1:64443205-64443224 | MS.gene29620:intron | 35.0% | |
| TAGGACAACTTAAGGAAAAG+AGG | + | chr5.1:64445470-64445489 | MS.gene29620:intron | 35.0% | |
| TCATCTGATAGAGGAGAAAT+TGG | - | chr5.1:64446046-64446065 | None:intergenic | 35.0% | |
| TCTATAAATGGGAAAGGGTA+TGG | - | chr5.1:64446142-64446161 | None:intergenic | 35.0% | |
| TCTGGTTGTAAAGTAGTTCT+TGG | - | chr5.1:64442841-64442860 | None:intergenic | 35.0% | |
| TGGTTTCATTCACTTGAGTA+TGG | + | chr5.1:64444876-64444895 | MS.gene29620:intron | 35.0% | |
| TGTTACTGCACTTATTATCG+GGG | + | chr5.1:64443480-64443499 | MS.gene29620:CDS | 35.0% | |
| TTGATCTTGACTCTTAGGTT+TGG | + | chr5.1:64444520-64444539 | MS.gene29620:intron | 35.0% | |
| TTTCGGTCCAAAAAAGAAAC+CGG | - | chr5.1:64444688-64444707 | None:intergenic | 35.0% | |
| ! | AAGCTTAACTCCAAGGTTTT+GGG | - | chr5.1:64443533-64443552 | None:intergenic | 35.0% |
| ! | ACCACATGACAATGTTTTGT+AGG | - | chr5.1:64443125-64443144 | None:intergenic | 35.0% |
| ! | CCACATGACAATGTTTTGTA+GGG | - | chr5.1:64443124-64443143 | None:intergenic | 35.0% |
| ! | GGAATAACAGTTTTGCTCTT+AGG | + | chr5.1:64446100-64446119 | MS.gene29620:CDS | 35.0% |
| ! | GGAGAATTTCTTTTGCCATA+TGG | + | chr5.1:64444464-64444483 | MS.gene29620:CDS | 35.0% |
| ! | TGGTTCTATATAGTCTATGG+CGG | - | chr5.1:64445319-64445338 | None:intergenic | 35.0% |
| ! | TTTGTTATACCTCCAAGTGA+CGG | + | chr5.1:64444092-64444111 | MS.gene29620:CDS | 35.0% |
| !! | ACAAGAGGGTTGATAGAAAT+TGG | - | chr5.1:64444376-64444395 | None:intergenic | 35.0% |
| !! | GACATGTACGATTTTGGTAT+TGG | + | chr5.1:64443863-64443882 | MS.gene29620:intron | 35.0% |
| !! | TGAATCGGATTCTAAAATGG+TGG | - | chr5.1:64444915-64444934 | None:intergenic | 35.0% |
| !! | TTTGGTGACATGTACGATTT+TGG | + | chr5.1:64443857-64443876 | MS.gene29620:intron | 35.0% |
| !!! | AAAACCTTATTTTTCGCTGC+AGG | - | chr5.1:64445370-64445389 | None:intergenic | 35.0% |
| !!! | GCTCTTTTGGTTCAATTACA+AGG | + | chr5.1:64443970-64443989 | MS.gene29620:CDS | 35.0% |
| !!! | TGATTTGCCGGTTTCTTTTT+TGG | + | chr5.1:64444678-64444697 | MS.gene29620:intron | 35.0% |
| AACAAGACCCAATGCAAATC+CGG | - | chr5.1:64444057-64444076 | None:intergenic | 40.0% | |
| AACAAGAGTGAGAGACAAAG+GGG | - | chr5.1:64445549-64445568 | None:intergenic | 40.0% | |
| AAGGAGAATGCCTCTAACAT+AGG | - | chr5.1:64442316-64442335 | None:intergenic | 40.0% | |
| AAGGTTATGAGCAACTCCAT+TGG | + | chr5.1:64444770-64444789 | MS.gene29620:intron | 40.0% | |
| AAGTAAGTACGAGTTGTCTC+TGG | - | chr5.1:64442859-64442878 | None:intergenic | 40.0% | |
| AATCAAGCAAGGAGAACACT+TGG | - | chr5.1:64445496-64445515 | None:intergenic | 40.0% | |
| AGAGCAACATACTTGTCATC+AGG | - | chr5.1:64446079-64446098 | None:intergenic | 40.0% | |
| AGGCTGTTAGGGACATATAA+AGG | - | chr5.1:64442378-64442397 | None:intergenic | 40.0% | |
| AGGTTATGAGCAACTCCATT+GGG | + | chr5.1:64444771-64444790 | MS.gene29620:intron | 40.0% | |
| AGTAGTTCTTGGAACGACAA+CGG | - | chr5.1:64442830-64442849 | None:intergenic | 40.0% | |
| ATTATCGGGGTACATGAACT+TGG | + | chr5.1:64443493-64443512 | MS.gene29620:CDS | 40.0% | |
| CAAAACCTTGGAGTTAAGCT+TGG | + | chr5.1:64443532-64443551 | MS.gene29620:CDS | 40.0% | |
| CAAACCTGCAGCGAAAAATA+AGG | + | chr5.1:64445363-64445382 | MS.gene29620:intron | 40.0% | |
| CAGATTGTCAACAGTTGATC+TGG | - | chr5.1:64443428-64443447 | None:intergenic | 40.0% | |
| CATACAACCTGTCTTTACTC+TGG | + | chr5.1:64443336-64443355 | MS.gene29620:intron | 40.0% | |
| CATGCAGGTACATAATCAAG+AGG | - | chr5.1:64445770-64445789 | None:intergenic | 40.0% | |
| CCCTACAAAACATTGTCATG+TGG | + | chr5.1:64443121-64443140 | MS.gene29620:intron | 40.0% | |
| GAGTTGCTCATAACCTTGTT+AGG | - | chr5.1:64444767-64444786 | None:intergenic | 40.0% | |
| GATAACATAGAAGTTGCCAG+TGG | + | chr5.1:64442242-64442261 | MS.gene29620:CDS | 40.0% | |
| GATGACAAGTATGTTGCTCT+CGG | + | chr5.1:64446079-64446098 | MS.gene29620:CDS | 40.0% | |
| GTTCATAAAGGTGAAGCCTT+GGG | - | chr5.1:64444992-64445011 | None:intergenic | 40.0% | |
| GTTGTCCTAGAAGCGAAAAA+TGG | - | chr5.1:64445459-64445478 | None:intergenic | 40.0% | |
| TAAGAAACTAGCAACTCGAG+AGG | - | chr5.1:64445712-64445731 | None:intergenic | 40.0% | |
| TAGGTCTTGGTATATGCATC+TGG | - | chr5.1:64445071-64445090 | None:intergenic | 40.0% | |
| TAGTCAACCAGAGTAAAGAC+AGG | - | chr5.1:64443346-64443365 | None:intergenic | 40.0% | |
| TATCAACCCTCTTGTGATCT+GGG | + | chr5.1:64444381-64444400 | MS.gene29620:CDS | 40.0% | |
| TATTCAAAGGAAACCTGCGA+GGG | + | chr5.1:64442601-64442620 | MS.gene29620:CDS | 40.0% | |
| TGAGTGTCCTTATGTCTGTA+CGG | - | chr5.1:64445525-64445544 | None:intergenic | 40.0% | |
| TGTAAATGTCCAATTGGAGG+AGG | + | chr5.1:64445668-64445687 | MS.gene29620:intron | 40.0% | |
| TGTTCATAAAGGTGAAGCCT+TGG | - | chr5.1:64444993-64445012 | None:intergenic | 40.0% | |
| TTTCCTTCTAGTCAATCCTG+AGG | + | chr5.1:64442789-64442808 | MS.gene29620:CDS | 40.0% | |
| ! | AAGGTGCCACCAAGATTTAA+AGG | - | chr5.1:64445611-64445630 | None:intergenic | 40.0% |
| ! | AGCTGTATTGCTGTCAGTTT+TGG | + | chr5.1:64445400-64445419 | MS.gene29620:intron | 40.0% |
| ! | ATATGCATCTGGAATGAGCA+TGG | - | chr5.1:64445060-64445079 | None:intergenic | 40.0% |
| ! | ATATGGCTTGCAGAATACCT+CGG | - | chr5.1:64445428-64445447 | None:intergenic | 40.0% |
| ! | CAAGCTTAACTCCAAGGTTT+TGG | - | chr5.1:64443534-64443553 | None:intergenic | 40.0% |
| ! | TGCTTAATTTGGTGGCAGAT+AGG | + | chr5.1:64443948-64443967 | MS.gene29620:intron | 40.0% |
| ! | TTGGTGGCACCTTTAAATCT+TGG | + | chr5.1:64445618-64445637 | MS.gene29620:intron | 40.0% |
| ! | TTTTGCCATATGGGGAAGAA+AGG | + | chr5.1:64444474-64444493 | MS.gene29620:CDS | 40.0% |
| !! | AGGTCTTGTTGCATGAAGAT+TGG | + | chr5.1:64442549-64442568 | MS.gene29620:intron | 40.0% |
| !! | ATCGGATTCTAAAATGGTGG+TGG | - | chr5.1:64444912-64444931 | None:intergenic | 40.0% |
| !! | GATTCTAAAATGGTGGTGGA+TGG | - | chr5.1:64444908-64444927 | None:intergenic | 40.0% |
| !! | GGATTTTCGATTGTGTTGCT+TGG | + | chr5.1:64445953-64445972 | MS.gene29620:CDS | 40.0% |
| !! | GGTCTTGTTGCATGAAGATT+GGG | + | chr5.1:64442550-64442569 | MS.gene29620:intron | 40.0% |
| !! | GTTTCTTGGTAACGTTCTCA+AGG | + | chr5.1:64444342-64444361 | MS.gene29620:CDS | 40.0% |
| !! | TACTGTTGATGGCATTGATG+AGG | - | chr5.1:64444420-64444439 | None:intergenic | 40.0% |
| !! | TTCGCTTCTAGGACAACTTA+AGG | + | chr5.1:64445462-64445481 | MS.gene29620:intron | 40.0% |
| !! | TTTCACGAGTCATTTCTAGC+TGG | + | chr5.1:64444143-64444162 | MS.gene29620:CDS | 40.0% |
| !! | TTTCTAGTTGCCCAAAACCT+TGG | + | chr5.1:64443520-64443539 | MS.gene29620:CDS | 40.0% |
| !!! | CTTTTTTAGCTGTACCTGAG+TGG | + | chr5.1:64442952-64442971 | MS.gene29620:intron | 40.0% |
| AACAAGCCAAGATCCTTACG+AGG | + | chr5.1:64442484-64442503 | MS.gene29620:CDS | 45.0% | |
| ACAACACCAATACCGTCACT+TGG | - | chr5.1:64444107-64444126 | None:intergenic | 45.0% | |
| ACCAATTGCCGGATTTGCAT+TGG | + | chr5.1:64444046-64444065 | MS.gene29620:CDS | 45.0% | |
| AGCAAACGGCTGCTGTAATT+TGG | - | chr5.1:64445161-64445180 | None:intergenic | 45.0% | |
| ATACCTCCAAGTGACGGTAT+TGG | + | chr5.1:64444098-64444117 | MS.gene29620:CDS | 45.0% | |
| ATCCAGTTGTTGAGGCTGTT+AGG | - | chr5.1:64442390-64442409 | None:intergenic | 45.0% | |
| ATTCCCGCTGGAGAAATTGA+TGG | + | chr5.1:64444439-64444458 | MS.gene29620:CDS | 45.0% | |
| CATCCTCAGGATTGACTAGA+AGG | - | chr5.1:64442795-64442814 | None:intergenic | 45.0% | |
| CCAATTGCCGGATTTGCATT+GGG | + | chr5.1:64444047-64444066 | MS.gene29620:CDS | 45.0% | |
| CGATACCTTTCTTCCCCATA+TGG | - | chr5.1:64444482-64444501 | None:intergenic | 45.0% | |
| CTATCAACCCTCTTGTGATC+TGG | + | chr5.1:64444380-64444399 | MS.gene29620:CDS | 45.0% | |
| CTATTCAAAGGAAACCTGCG+AGG | + | chr5.1:64442600-64442619 | MS.gene29620:CDS | 45.0% | |
| GGACCGAAAGACATACGAAT+AGG | + | chr5.1:64444699-64444718 | MS.gene29620:intron | 45.0% | |
| GGAGTCGAATGCTATGCTTT+GGG | - | chr5.1:64445298-64445317 | None:intergenic | 45.0% | |
| GGTGACAGTAGATTTGACAC+AGG | - | chr5.1:64445189-64445208 | None:intergenic | 45.0% | |
| GTCCTAGAAGCGAAAAATGG+TGG | - | chr5.1:64445456-64445475 | None:intergenic | 45.0% | |
| GTCTTTGGCATGCAATGATC+TGG | - | chr5.1:64444970-64444989 | None:intergenic | 45.0% | |
| GTGGCACCTTTAAATCTTGG+TGG | + | chr5.1:64445621-64445640 | MS.gene29620:intron | 45.0% | |
| TACGGTTTGCGAATCAAGCA+AGG | - | chr5.1:64445507-64445526 | None:intergenic | 45.0% | |
| TATCATACAACCTGCCAGCT+AGG | - | chr5.1:64443574-64443593 | None:intergenic | 45.0% | |
| TCCACCCTAGCAGAAAAATC+AGG | - | chr5.1:64442577-64442596 | None:intergenic | 45.0% | |
| TCCAGTTGTTGAGGCTGTTA+GGG | - | chr5.1:64442389-64442408 | None:intergenic | 45.0% | |
| TCGCAAACCGTACAGACATA+AGG | + | chr5.1:64445515-64445534 | MS.gene29620:intron | 45.0% | |
| TGACTCTTAGGTTTGGCCAA+TGG | + | chr5.1:64444527-64444546 | MS.gene29620:intron | 45.0% | |
| TGCCAGCTAGGAACAAAGTA+CGG | - | chr5.1:64443562-64443581 | None:intergenic | 45.0% | |
| TGCTCATAACCTTGTTAGGG+CGG | - | chr5.1:64444763-64444782 | None:intergenic | 45.0% | |
| TGTCTAAAGAGGCAACCCAA+TGG | - | chr5.1:64444789-64444808 | None:intergenic | 45.0% | |
| TTAGCTGTACCTGAGTGGTT+TGG | + | chr5.1:64442957-64442976 | MS.gene29620:intron | 45.0% | |
| TTGTTAAAGGATGGCCTACC+TGG | + | chr5.1:64443451-64443470 | MS.gene29620:CDS | 45.0% | |
| TTTGGAAAGCCTCCTCCAAT+TGG | - | chr5.1:64445680-64445699 | None:intergenic | 45.0% | |
| ! | GGGTCCTGATTTTTCTGCTA+GGG | + | chr5.1:64442570-64442589 | MS.gene29620:intron | 45.0% |
| ! | GTTGCGTTTTCTCAGTACAC+AGG | - | chr5.1:64445099-64445118 | None:intergenic | 45.0% |
| ! | TAGGGTGGAGTGCTATTCAA+AGG | + | chr5.1:64442588-64442607 | MS.gene29620:intron | 45.0% |
| ! | TCCTGATTTTTCTGCTAGGG+TGG | + | chr5.1:64442573-64442592 | MS.gene29620:intron | 45.0% |
| ! | TGGGTCCTGATTTTTCTGCT+AGG | + | chr5.1:64442569-64442588 | MS.gene29620:intron | 45.0% |
| !! | AGCCACCATTTTTCGCTTCT+AGG | + | chr5.1:64445451-64445470 | MS.gene29620:intron | 45.0% |
| !! | CTTGGTAACGTTCTCAAGGA+AGG | + | chr5.1:64444346-64444365 | MS.gene29620:CDS | 45.0% |
| !! | GGTCTTGTTCTTCTGCTTCT+AGG | + | chr5.1:64444068-64444087 | MS.gene29620:CDS | 45.0% |
| !! | TATGCTTTGGGAGTCCATTC+AGG | - | chr5.1:64445286-64445305 | None:intergenic | 45.0% |
| !! | TTTTAGAAGCTTTCCCTCGC+AGG | - | chr5.1:64442617-64442636 | None:intergenic | 45.0% |
| AAGGTGAAGCCTTGGGTCTT+TGG | - | chr5.1:64444985-64445004 | None:intergenic | 50.0% | |
| ACACCAATACCGTCACTTGG+AGG | - | chr5.1:64444104-64444123 | None:intergenic | 50.0% | |
| ACGGCTAGAACAACTGCACA+CGG | - | chr5.1:64445210-64445229 | None:intergenic | 50.0% | |
| AGACTTGGCAAGCTGGAACA+CGG | - | chr5.1:64445229-64445248 | None:intergenic | 50.0% | |
| AGATAGGCACACACCTCGTA+AGG | - | chr5.1:64442500-64442519 | None:intergenic | 50.0% | |
| CACACACCTCGTAAGGATCT+TGG | - | chr5.1:64442493-64442512 | None:intergenic | 50.0% | |
| CAGGCTTCAATTCGCTTCAC+AGG | + | chr5.1:64445932-64445951 | MS.gene29620:intron | 50.0% | |
| CATTGCATGCCAAAGACCCA+AGG | + | chr5.1:64444973-64444992 | MS.gene29620:intron | 50.0% | |
| CCCAATGCAAATCCGGCAAT+TGG | - | chr5.1:64444050-64444069 | None:intergenic | 50.0% | |
| CCCTCCATCAATTTCTCCAG+CGG | - | chr5.1:64444446-64444465 | None:intergenic | 50.0% | |
| CCGCTGGAGAAATTGATGGA+GGG | + | chr5.1:64444443-64444462 | MS.gene29620:CDS | 50.0% | |
| CCTCCATCAATTTCTCCAGC+GGG | - | chr5.1:64444445-64444464 | None:intergenic | 50.0% | |
| CGGAGTCGAATGCTATGCTT+TGG | - | chr5.1:64445299-64445318 | None:intergenic | 50.0% | |
| GCCAGCTAGGAACAAAGTAC+GGG | - | chr5.1:64443561-64443580 | None:intergenic | 50.0% | |
| GGACTCCAAGCTTAACTCCA+AGG | - | chr5.1:64443540-64443559 | None:intergenic | 50.0% | |
| GTACTTTGTTCCTAGCTGGC+AGG | + | chr5.1:64443561-64443580 | MS.gene29620:CDS | 50.0% | |
| TCCAGCGGGAATACTGTTGA+TGG | - | chr5.1:64444431-64444450 | None:intergenic | 50.0% | |
| TCCCGTACTTTGTTCCTAGC+TGG | + | chr5.1:64443557-64443576 | MS.gene29620:CDS | 50.0% | |
| TCCCTAACAGCCTCAACAAC+TGG | + | chr5.1:64442385-64442404 | MS.gene29620:intron | 50.0% | |
| TCCTGAGGATGATAAGCCAG+TGG | + | chr5.1:64442804-64442823 | MS.gene29620:CDS | 50.0% | |
| TGACACAGGCAGACAGCAAA+CGG | - | chr5.1:64445175-64445194 | None:intergenic | 50.0% | |
| TGGGACATTGCGAAGCAGTA+AGG | - | chr5.1:64443015-64443034 | None:intergenic | 50.0% | |
| TTGCTCAAGATTGCAGCTGC+TGG | + | chr5.1:64444023-64444042 | MS.gene29620:CDS | 50.0% | |
| ! | GCGTTTTCTCAGTACACAGG+AGG | - | chr5.1:64445096-64445115 | None:intergenic | 50.0% |
| ! | GGAGAAGCCAGACCAGATTT+TGG | - | chr5.1:64445265-64445284 | None:intergenic | 50.0% |
| ! | TACACAGGAGGCATAGGTCT+TGG | - | chr5.1:64445084-64445103 | None:intergenic | 50.0% |
| ! | TCTCAGTACACAGGAGGCAT+AGG | - | chr5.1:64445090-64445109 | None:intergenic | 50.0% |
| ! | TGGTGGCAGATAGGCTCTTT+TGG | + | chr5.1:64443957-64443976 | MS.gene29620:intron | 50.0% |
| !! | CACGAGTCATTTCTAGCTGG+CGG | + | chr5.1:64444146-64444165 | MS.gene29620:CDS | 50.0% |
| !! | TCATTTCTAGCTGGCGGCAT+TGG | + | chr5.1:64444152-64444171 | MS.gene29620:CDS | 50.0% |
| !!! | TGCTGTCAGTTTTGGTTCCG+AGG | + | chr5.1:64445408-64445427 | MS.gene29620:intron | 50.0% |
| !!! | TGGTTTGGTGCTGCGTCTTT+TGG | + | chr5.1:64442972-64442991 | MS.gene29620:CDS | 50.0% |
| ACCCTCTTGTGATCTGGGCT+TGG | + | chr5.1:64444386-64444405 | MS.gene29620:CDS | 55.0% | |
| AGTGCAGTAACAAGGGCTCC+AGG | - | chr5.1:64443472-64443491 | None:intergenic | 55.0% | |
| ATCACCTCTGCCAGGTGTGA+AGG | + | chr5.1:64442265-64442284 | MS.gene29620:CDS | 55.0% | |
| ATCACCTTCACACCTGGCAG+AGG | - | chr5.1:64442272-64442291 | None:intergenic | 55.0% | |
| CAGTAACAAGGGCTCCAGGT+AGG | - | chr5.1:64443468-64443487 | None:intergenic | 55.0% | |
| CCAGCTTGCCAAGTCTGCTT+GGG | + | chr5.1:64445233-64445252 | MS.gene29620:intron | 55.0% | |
| CCCAAGCCCAGATCACAAGA+GGG | - | chr5.1:64444390-64444409 | None:intergenic | 55.0% | |
| CCCGCTGGAGAAATTGATGG+AGG | + | chr5.1:64444442-64444461 | MS.gene29620:CDS | 55.0% | |
| CCCTCTTGTGATCTGGGCTT+GGG | + | chr5.1:64444387-64444406 | MS.gene29620:CDS | 55.0% | |
| CTTGGGCTCGTGCCAAAATC+TGG | + | chr5.1:64445250-64445269 | MS.gene29620:intron | 55.0% | |
| GCCATCAACAGTATTCCCGC+TGG | + | chr5.1:64444427-64444446 | MS.gene29620:CDS | 55.0% | |
| GCTCGTGCCAAAATCTGGTC+TGG | + | chr5.1:64445255-64445274 | MS.gene29620:intron | 55.0% | |
| TCCAGCTTGCCAAGTCTGCT+TGG | + | chr5.1:64445232-64445251 | MS.gene29620:intron | 55.0% | |
| ! | CTGGTCTGGCTTCTCCTGAA+TGG | + | chr5.1:64445269-64445288 | MS.gene29620:intron | 55.0% |
| !! | GCCACTGGCTTATCATCCTC+AGG | - | chr5.1:64442808-64442827 | None:intergenic | 55.0% |
| ACCTGGCAGAGGTGATCCAC+TGG | - | chr5.1:64442261-64442280 | None:intergenic | 60.0% | |
| CCCAAGCAGACTTGGCAAGC+TGG | - | chr5.1:64445236-64445255 | None:intergenic | 60.0% | |
| CTTGGAACGACAACGGCCAC+TGG | - | chr5.1:64442823-64442842 | None:intergenic | 60.0% | |
| CTTGTGATCTGGGCTTGGGC+AGG | + | chr5.1:64444391-64444410 | MS.gene29620:CDS | 60.0% | |
| GACGCAGCACCAAACCACTC+AGG | - | chr5.1:64442969-64442988 | None:intergenic | 60.0% | |
| GCAGCTGCTGGACCAATTGC+CGG | + | chr5.1:64444035-64444054 | MS.gene29620:CDS | 60.0% | |
| GCCCAAGCCCAGATCACAAG+AGG | - | chr5.1:64444391-64444410 | None:intergenic | 60.0% | |
| GGCAGAAGCCGAGAGCTGTT+TGG | - | chr5.1:64445140-64445159 | None:intergenic | 60.0% | |
| GTGATGCAGCCGCCCTAACA+AGG | + | chr5.1:64444751-64444770 | MS.gene29620:intron | 60.0% | |
| GCCAGTGGATCACCTCTGCC+AGG | + | chr5.1:64442257-64442276 | MS.gene29620:CDS | 65.0% | |
| GGCACGAGCCCAAGCAGACT+TGG | - | chr5.1:64445244-64445263 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 64442236 | 64446183 | 64442236 | ID=MS.gene29620 |
| chr5.1 | mRNA | 64442236 | 64446183 | 64442236 | ID=MS.gene29620.t1;Parent=MS.gene29620 |
| chr5.1 | exon | 64442236 | 64442286 | 64442236 | ID=MS.gene29620.t1.exon1;Parent=MS.gene29620.t1 |
| chr5.1 | CDS | 64442236 | 64442286 | 64442236 | ID=cds.MS.gene29620.t1;Parent=MS.gene29620.t1 |
| chr5.1 | exon | 64442395 | 64442505 | 64442395 | ID=MS.gene29620.t1.exon2;Parent=MS.gene29620.t1 |
| chr5.1 | CDS | 64442395 | 64442505 | 64442395 | ID=cds.MS.gene29620.t1;Parent=MS.gene29620.t1 |
| chr5.1 | exon | 64442591 | 64442665 | 64442591 | ID=MS.gene29620.t1.exon3;Parent=MS.gene29620.t1 |
| chr5.1 | CDS | 64442591 | 64442665 | 64442591 | ID=cds.MS.gene29620.t1;Parent=MS.gene29620.t1 |
| chr5.1 | exon | 64442763 | 64442868 | 64442763 | ID=MS.gene29620.t1.exon4;Parent=MS.gene29620.t1 |
| chr5.1 | CDS | 64442763 | 64442868 | 64442763 | ID=cds.MS.gene29620.t1;Parent=MS.gene29620.t1 |
| chr5.1 | exon | 64442961 | 64443114 | 64442961 | ID=MS.gene29620.t1.exon5;Parent=MS.gene29620.t1 |
| chr5.1 | CDS | 64442961 | 64443114 | 64442961 | ID=cds.MS.gene29620.t1;Parent=MS.gene29620.t1 |
| chr5.1 | exon | 64443429 | 64443582 | 64443429 | ID=MS.gene29620.t1.exon6;Parent=MS.gene29620.t1 |
| chr5.1 | CDS | 64443429 | 64443582 | 64443429 | ID=cds.MS.gene29620.t1;Parent=MS.gene29620.t1 |
| chr5.1 | exon | 64443966 | 64444173 | 64443966 | ID=MS.gene29620.t1.exon7;Parent=MS.gene29620.t1 |
| chr5.1 | CDS | 64443966 | 64444173 | 64443966 | ID=cds.MS.gene29620.t1;Parent=MS.gene29620.t1 |
| chr5.1 | exon | 64444335 | 64444495 | 64444335 | ID=MS.gene29620.t1.exon8;Parent=MS.gene29620.t1 |
| chr5.1 | CDS | 64444335 | 64444495 | 64444335 | ID=cds.MS.gene29620.t1;Parent=MS.gene29620.t1 |
| chr5.1 | exon | 64445935 | 64446183 | 64445935 | ID=MS.gene29620.t1.exon9;Parent=MS.gene29620.t1 |
| chr5.1 | CDS | 64445935 | 64446183 | 64445935 | ID=cds.MS.gene29620.t1;Parent=MS.gene29620.t1 |
| Gene Sequence |
| Protein sequence |
