Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51112.t1 | XP_003616742.1 | 100 | 206 | 0 | 0 | 1 | 206 | 1 | 206 | 2.80E-110 | 407.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51112.t1 | Q9FKC0 | 85.0 | 206 | 31 | 0 | 1 | 206 | 1 | 206 | 2.9e-100 | 365.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51112.t1 | G7K7C0 | 100.0 | 206 | 0 | 0 | 1 | 206 | 1 | 206 | 2.0e-110 | 407.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51112.t1 | MTR_5g083790 | 100.000 | 206 | 0 | 0 | 1 | 206 | 1 | 206 | 4.23e-152 | 420 |
| MS.gene51112.t1 | MTR_1g023590 | 91.262 | 206 | 18 | 0 | 1 | 206 | 1 | 206 | 4.04e-138 | 384 |
| MS.gene51112.t1 | MTR_7g057770 | 90.291 | 206 | 20 | 0 | 1 | 206 | 1 | 206 | 1.74e-137 | 383 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51112.t1 | AT4G13170 | 85.922 | 206 | 29 | 0 | 1 | 206 | 1 | 206 | 4.54e-135 | 377 |
| MS.gene51112.t1 | AT5G48760 | 84.951 | 206 | 31 | 0 | 1 | 206 | 1 | 206 | 8.02e-135 | 376 |
| MS.gene51112.t1 | AT5G48760 | 84.951 | 206 | 31 | 0 | 1 | 206 | 1 | 206 | 8.02e-135 | 376 |
| MS.gene51112.t1 | AT3G07110 | 84.951 | 206 | 31 | 0 | 1 | 206 | 1 | 206 | 7.04e-134 | 374 |
| MS.gene51112.t1 | AT3G24830 | 83.981 | 206 | 33 | 0 | 1 | 206 | 1 | 206 | 2.23e-132 | 370 |
| MS.gene51112.t1 | AT3G07110 | 84.541 | 207 | 31 | 1 | 1 | 206 | 1 | 207 | 2.84e-132 | 370 |
Find 48 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGCAGATCAATAAATTA+AGG | 0.231717 | 5.1:-65982795 | MS.gene51112:CDS |
| TGAAGTACATGAGGTTTCTT+AGG | 0.283670 | 5.1:-65984925 | MS.gene51112:CDS |
| AATAGGACCATGACTGGGTT+TGG | 0.418442 | 5.1:+65984889 | None:intergenic |
| ATCCTCTTAATCTTGTCATA+TGG | 0.423761 | 5.1:+65983286 | None:intergenic |
| GAGAAAGGAAAGATCACAAT+TGG | 0.426472 | 5.1:-65982830 | MS.gene51112:CDS |
| CTCCATATGACAAGATTAAG+AGG | 0.429099 | 5.1:-65983288 | MS.gene51112:CDS |
| TAGGGTATTGAGGCTTCAAA+AGG | 0.430477 | 5.1:-65983031 | MS.gene51112:CDS |
| GAGGGAGCCCTAAAATGAAT+AGG | 0.445189 | 5.1:+65984872 | None:intergenic |
| GTATGTCTGGTGGACTGGTT+AGG | 0.450920 | 5.1:-65984955 | MS.gene51112:CDS |
| TGAACTTACTTGAGAGCATC+AGG | 0.458956 | 5.1:+65983256 | None:intergenic |
| GAAGCAGATCAATAAATTAA+GGG | 0.462554 | 5.1:-65982794 | MS.gene51112:CDS |
| TAAATGAATTTAGGGTATTG+AGG | 0.470143 | 5.1:-65983041 | MS.gene51112:intron |
| AGCTGCTCTTGCTAGGTTGA+AGG | 0.470276 | 5.1:-65983329 | MS.gene51112:CDS |
| GGACAATTGTCTGCTGAGGT+TGG | 0.472109 | 5.1:-65982988 | MS.gene51112:CDS |
| AGTTCTCCAGAAAATCTTAG+AGG | 0.472646 | 5.1:+65984853 | None:intergenic |
| GAACTACTACGATATCATAA+AGG | 0.480367 | 5.1:-65982962 | MS.gene51112:intron |
| AAAATTGTGGACGAGAAGCT+TGG | 0.483493 | 5.1:-65982760 | MS.gene51112:CDS |
| AAATTGTGGACGAGAAGCTT+GGG | 0.489613 | 5.1:-65982759 | MS.gene51112:CDS |
| TCTCCACGCTTTGTCTTGTG+TGG | 0.491410 | 5.1:+65983352 | None:intergenic |
| ACATGAGGTTTCTTAGGAAG+AGG | 0.494032 | 5.1:-65984919 | MS.gene51112:CDS |
| AAAATGAATAGGACCATGAC+TGG | 0.503601 | 5.1:+65984883 | None:intergenic |
| GGAATTGGAAAATAAGAGAA+AGG | 0.504497 | 5.1:-65982845 | MS.gene51112:CDS |
| AGGAGCAAGTACTTGTAGTT+CGG | 0.510535 | 5.1:+65982735 | None:intergenic |
| TGCGAAGAGATTTGTATGTC+TGG | 0.513369 | 5.1:-65984968 | MS.gene51112:CDS |
| GGACACAAATTCTGTCTGCT+TGG | 0.514702 | 5.1:-65983009 | MS.gene51112:CDS |
| AATTGTCTGCTGAGGTTGGA+TGG | 0.529213 | 5.1:-65982984 | MS.gene51112:CDS |
| GTGGAGAAGCTGCTCTTGCT+AGG | 0.536980 | 5.1:-65983336 | MS.gene51112:CDS |
| GATTTGTATGTCTGGTGGAC+TGG | 0.539612 | 5.1:-65984960 | MS.gene51112:CDS |
| GACTCTCTTTGCACATGCGC+CGG | 0.550515 | 5.1:+65985081 | None:intergenic |
| AAGCCTATTCAGTACTTGAC+AGG | 0.553701 | 5.1:+65982715 | None:intergenic |
| GCTTGGACAATTGTCTGCTG+AGG | 0.554621 | 5.1:-65982992 | MS.gene51112:CDS |
| TTAATCTTGTCATATGGAGG+TGG | 0.558115 | 5.1:+65983292 | None:intergenic |
| CTCTTAATCTTGTCATATGG+AGG | 0.571934 | 5.1:+65983289 | None:intergenic |
| GCTAGGTTGAAGGTCTATGA+AGG | 0.574592 | 5.1:-65983319 | MS.gene51112:CDS |
| GTTCTCCAGAAAATCTTAGA+GGG | 0.584296 | 5.1:+65984854 | None:intergenic |
| AGGGTATTGAGGCTTCAAAA+GGG | 0.594183 | 5.1:-65983030 | MS.gene51112:CDS |
| GGCAGAAAATGAAGTACATG+AGG | 0.595104 | 5.1:-65984934 | MS.gene51112:CDS |
| ATATGACAAGATTAAGAGGA+TGG | 0.595460 | 5.1:-65983284 | MS.gene51112:CDS |
| ATGAATACCAAACCCAGTCA+TGG | 0.611358 | 5.1:-65984896 | MS.gene51112:CDS |
| GACGCTCGCCACCACATGCT+AGG | 0.613396 | 5.1:-65985052 | MS.gene51112:CDS |
| GGTGAAAGCTGAGAAAATTG+TGG | 0.628360 | 5.1:-65982773 | MS.gene51112:CDS |
| CTCGCCACCACATGCTAGGT+CGG | 0.628652 | 5.1:-65985048 | MS.gene51112:CDS |
| ATTCCACACAAGACAAAGCG+TGG | 0.632644 | 5.1:-65983355 | MS.gene51112:CDS |
| AAATGAATAGGACCATGACT+GGG | 0.669561 | 5.1:+65984884 | None:intergenic |
| GTCGCAAAAGAGTTACTCAA+CGG | 0.686543 | 5.1:-65985013 | MS.gene51112:CDS |
| ACGCTAACCGACCTAGCATG+TGG | 0.688886 | 5.1:+65985041 | None:intergenic |
| CTAACCGACCTAGCATGTGG+TGG | 0.710751 | 5.1:+65985044 | None:intergenic |
| GAAGAGATTTGTATGTCTGG+TGG | 0.717215 | 5.1:-65984965 | MS.gene51112:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTACATAAAATATATGT+AGG | - | chr5.1:65984673-65984692 | MS.gene51112:intron | 10.0% |
| !! | AATTACATAAAATATATGTA+GGG | - | chr5.1:65984674-65984693 | MS.gene51112:intron | 10.0% |
| !!! | ATTTGAATTTTCTAATTTAT+AGG | + | chr5.1:65984639-65984658 | None:intergenic | 10.0% |
| !!! | TTTGAATTTTCTAATTTATA+GGG | + | chr5.1:65984638-65984657 | None:intergenic | 10.0% |
| !!! | ATCTAAGTTTAGTTTTTTTA+TGG | - | chr5.1:65984596-65984615 | MS.gene51112:intron | 15.0% |
| !! | AAAAAATAGAGAATTGTTGA+TGG | - | chr5.1:65983136-65983155 | MS.gene51112:intron | 20.0% |
| !! | AAGCTTCTATTTAGTATAAT+GGG | - | chr5.1:65983789-65983808 | MS.gene51112:intron | 20.0% |
| !! | ATTATGAAACTATGTGTTTA+GGG | - | chr5.1:65983394-65983413 | MS.gene51112:intron | 20.0% |
| !! | CTAATTAAATTTGTAGTGTT+TGG | - | chr5.1:65983171-65983190 | MS.gene51112:intron | 20.0% |
| !! | TAGAATGATACTACATAATA+AGG | - | chr5.1:65984164-65984183 | MS.gene51112:intron | 20.0% |
| !! | TATTATGAAACTATGTGTTT+AGG | - | chr5.1:65983393-65983412 | MS.gene51112:intron | 20.0% |
| !! | TGAATGTGTAAATGAATTTA+GGG | - | chr5.1:65984768-65984787 | MS.gene51112:intron | 20.0% |
| !!! | AAGCTACTATTTAGAATAAT+TGG | - | chr5.1:65984010-65984029 | MS.gene51112:intron | 20.0% |
| !!! | AGTTTAGTTTTTTTATGGTT+AGG | - | chr5.1:65984601-65984620 | MS.gene51112:intron | 20.0% |
| !!! | ATTTTATGTAATTTCATGCA+CGG | + | chr5.1:65984667-65984686 | None:intergenic | 20.0% |
| ! | AATAATTGGTTGTCATAAAG+AGG | - | chr5.1:65984024-65984043 | MS.gene51112:intron | 25.0% |
| ! | ACATAATAAGGTAAAACATG+TGG | - | chr5.1:65984176-65984195 | MS.gene51112:intron | 25.0% |
| ! | ACTCTATAACATAGTTGAAT+TGG | - | chr5.1:65983849-65983868 | MS.gene51112:intron | 25.0% |
| ! | AGAAGCAGATCAATAAATTA+AGG | - | chr5.1:65985022-65985041 | MS.gene51112:CDS | 25.0% |
| ! | ATTTGACTAAAAAAACCGTT+TGG | + | chr5.1:65983294-65983313 | None:intergenic | 25.0% |
| ! | CATAAAAGTGATACACTTAA+TGG | - | chr5.1:65983233-65983252 | MS.gene51112:intron | 25.0% |
| ! | CTGAATGTGTAAATGAATTT+AGG | - | chr5.1:65984767-65984786 | MS.gene51112:intron | 25.0% |
| ! | GAAGCAGATCAATAAATTAA+GGG | - | chr5.1:65985023-65985042 | MS.gene51112:CDS | 25.0% |
| ! | GAAGCTTCTATTTAGTATAA+TGG | - | chr5.1:65983788-65983807 | MS.gene51112:intron | 25.0% |
| ! | GTGTTTATATGATAGTTGTT+TGG | - | chr5.1:65983106-65983125 | MS.gene51112:intron | 25.0% |
| ! | GTTCAAATTAAGATATGCTA+CGG | + | chr5.1:65984069-65984088 | None:intergenic | 25.0% |
| ! | GTTTGTCAATTAAGATTACA+AGG | - | chr5.1:65983265-65983284 | MS.gene51112:CDS | 25.0% |
| ! | TTAAATAAGCCAATTCAAAC+AGG | + | chr5.1:65983449-65983468 | None:intergenic | 25.0% |
| !! | AAGCTGCTATTTAGTATAAA+GGG | - | chr5.1:65984199-65984218 | MS.gene51112:intron | 25.0% |
| !!! | GTAAATCTTTTGTTGATGAT+AGG | - | chr5.1:65984951-65984970 | MS.gene51112:CDS | 25.0% |
| !!! | TAAATGAATTTAGGGTATTG+AGG | - | chr5.1:65984776-65984795 | MS.gene51112:intron | 25.0% |
| !!! | TACTAACATAAGCATTGATA+AGG | - | chr5.1:65983476-65983495 | MS.gene51112:intron | 25.0% |
| !!! | TTGTGTTATAGCTGTTATTT+TGG | - | chr5.1:65984368-65984387 | MS.gene51112:intron | 25.0% |
| !!! | TTTTAAGTGTTGTCAAATAG+AGG | - | chr5.1:65983560-65983579 | MS.gene51112:intron | 25.0% |
| !!! | TTTTTGCTATTGACATTACT+GGG | - | chr5.1:65984100-65984119 | MS.gene51112:intron | 25.0% |
| !!! | TTTTTTGCTATTGACATTAC+TGG | - | chr5.1:65984099-65984118 | MS.gene51112:intron | 25.0% |
| AAAATAGGACCTGTTTGAAT+TGG | - | chr5.1:65983437-65983456 | MS.gene51112:intron | 30.0% | |
| AAGATTACAAGGATACCAAA+CGG | - | chr5.1:65983276-65983295 | MS.gene51112:CDS | 30.0% | |
| ATATGACAAGATTAAGAGGA+TGG | - | chr5.1:65984533-65984552 | MS.gene51112:intron | 30.0% | |
| ATATGATAGTTGTTTGGCTA+TGG | - | chr5.1:65983112-65983131 | MS.gene51112:intron | 30.0% | |
| ATCCTCTTAATCTTGTCATA+TGG | + | chr5.1:65984534-65984553 | None:intergenic | 30.0% | |
| GAACTACTACGATATCATAA+AGG | - | chr5.1:65984855-65984874 | MS.gene51112:CDS | 30.0% | |
| GGAATTGGAAAATAAGAGAA+AGG | - | chr5.1:65984972-65984991 | MS.gene51112:CDS | 30.0% | |
| TATTGTTTGCAATGCACTAT+TGG | - | chr5.1:65983621-65983640 | MS.gene51112:intron | 30.0% | |
| ! | GAAGCTGCTATTTAGTATAA+AGG | - | chr5.1:65984198-65984217 | MS.gene51112:intron | 30.0% |
| ! | TCATGGTCCTATTCATTTTA+GGG | - | chr5.1:65982938-65982957 | MS.gene51112:intron | 30.0% |
| ! | TTTTATGCGATTGACAACAT+TGG | - | chr5.1:65983884-65983903 | MS.gene51112:intron | 30.0% |
| !! | AAGCATTGATAAGGCTATTT+GGG | - | chr5.1:65983485-65983504 | MS.gene51112:intron | 30.0% |
| !! | TAAGCATTGATAAGGCTATT+TGG | - | chr5.1:65983484-65983503 | MS.gene51112:intron | 30.0% |
| !!! | CTTTTGTTGATGATAGGAAT+TGG | - | chr5.1:65984957-65984976 | MS.gene51112:CDS | 30.0% |
| !!! | GCTGTTATTTTGGTTTTTGA+CGG | - | chr5.1:65984378-65984397 | MS.gene51112:intron | 30.0% |
| !!! | TTTTTTGCATTTGACATCAC+TGG | - | chr5.1:65984276-65984295 | MS.gene51112:intron | 30.0% |
| AAAATGAATAGGACCATGAC+TGG | + | chr5.1:65982937-65982956 | None:intergenic | 35.0% | |
| AAATGAATAGGACCATGACT+GGG | + | chr5.1:65982936-65982955 | None:intergenic | 35.0% | |
| ACAACCTAAGATAAAACCTG+TGG | - | chr5.1:65983987-65984006 | MS.gene51112:intron | 35.0% | |
| AGTTCTCCAGAAAATCTTAG+AGG | + | chr5.1:65982967-65982986 | None:intergenic | 35.0% | |
| CGTAGAGGAATTTGAACTAA+TGG | - | chr5.1:65983597-65983616 | MS.gene51112:intron | 35.0% | |
| CTCCATATGACAAGATTAAG+AGG | - | chr5.1:65984529-65984548 | MS.gene51112:intron | 35.0% | |
| CTCTTAATCTTGTCATATGG+AGG | + | chr5.1:65984531-65984550 | None:intergenic | 35.0% | |
| GAGAAAGGAAAGATCACAAT+TGG | - | chr5.1:65984987-65985006 | MS.gene51112:CDS | 35.0% | |
| GTTCTCCAGAAAATCTTAGA+GGG | + | chr5.1:65982966-65982985 | None:intergenic | 35.0% | |
| TATAAAGGGATGTCAGATAG+AGG | - | chr5.1:65984213-65984232 | MS.gene51112:intron | 35.0% | |
| TGAAGTACATGAGGTTTCTT+AGG | - | chr5.1:65982892-65982911 | MS.gene51112:intron | 35.0% | |
| TGTTATAGAGTACAGAACTC+TGG | + | chr5.1:65983840-65983859 | None:intergenic | 35.0% | |
| TTAATCTTGTCATATGGAGG+TGG | + | chr5.1:65984528-65984547 | None:intergenic | 35.0% | |
| TTCTAAATAGTAGCTTCCAC+AGG | + | chr5.1:65984006-65984025 | None:intergenic | 35.0% | |
| ! | GTCATGGTCCTATTCATTTT+AGG | - | chr5.1:65982937-65982956 | MS.gene51112:intron | 35.0% |
| !! | TAGTATAATGGGTTGTCAGA+TGG | - | chr5.1:65983800-65983819 | MS.gene51112:intron | 35.0% |
| AAAATTGTGGACGAGAAGCT+TGG | - | chr5.1:65985057-65985076 | MS.gene51112:CDS | 40.0% | |
| AAATTGTGGACGAGAAGCTT+GGG | - | chr5.1:65985058-65985077 | MS.gene51112:CDS | 40.0% | |
| ACATGAGGTTTCTTAGGAAG+AGG | - | chr5.1:65982898-65982917 | MS.gene51112:intron | 40.0% | |
| AGGAGCAAGTACTTGTAGTT+CGG | + | chr5.1:65985085-65985104 | None:intergenic | 40.0% | |
| ATCTGGTCGGAGTTCAAAAT+AGG | - | chr5.1:65983422-65983441 | MS.gene51112:intron | 40.0% | |
| ATGAATACCAAACCCAGTCA+TGG | - | chr5.1:65982921-65982940 | MS.gene51112:intron | 40.0% | |
| CAAATGCAGCTACACTACTA+TGG | + | chr5.1:65983658-65983677 | None:intergenic | 40.0% | |
| GAAGAGATTTGTATGTCTGG+TGG | - | chr5.1:65982852-65982871 | MS.gene51112:intron | 40.0% | |
| GAGAATGTTTGTGACAACAC+TGG | - | chr5.1:65983911-65983930 | MS.gene51112:intron | 40.0% | |
| GATACAGCACTATATCGTAG+AGG | - | chr5.1:65983582-65983601 | MS.gene51112:intron | 40.0% | |
| GGCAGAAAATGAAGTACATG+AGG | - | chr5.1:65982883-65982902 | MS.gene51112:intron | 40.0% | |
| GGTGAAAGCTGAGAAAATTG+TGG | - | chr5.1:65985044-65985063 | MS.gene51112:CDS | 40.0% | |
| GTCGCAAAAGAGTTACTCAA+CGG | - | chr5.1:65982804-65982823 | MS.gene51112:CDS | 40.0% | |
| TAAGATATGCTACGGAGCTA+TGG | + | chr5.1:65984061-65984080 | None:intergenic | 40.0% | |
| TGCGAAGAGATTTGTATGTC+TGG | - | chr5.1:65982849-65982868 | MS.gene51112:intron | 40.0% | |
| TTGTAGAATGATACCACGTC+AGG | - | chr5.1:65983754-65983773 | MS.gene51112:intron | 40.0% | |
| TTGTCATAAAGAGGCTCTTG+CGG | - | chr5.1:65984033-65984052 | MS.gene51112:intron | 40.0% | |
| ! | ATGTGTTTAGGGTTGTCATC+TGG | - | chr5.1:65983405-65983424 | MS.gene51112:intron | 40.0% |
| !! | AGGGTATTGAGGCTTCAAAA+GGG | - | chr5.1:65984787-65984806 | MS.gene51112:intron | 40.0% |
| !! | ATTTTCTGGAGAACTCTTCG+TGG | - | chr5.1:65982972-65982991 | MS.gene51112:CDS | 40.0% |
| !! | GCTTCCACAGGTTTTATCTT+AGG | + | chr5.1:65983994-65984013 | None:intergenic | 40.0% |
| !! | TAGGGTATTGAGGCTTCAAA+AGG | - | chr5.1:65984786-65984805 | MS.gene51112:intron | 40.0% |
| !! | TATAATGGGTTGTCAGATGG+AGG | - | chr5.1:65983803-65983822 | MS.gene51112:intron | 40.0% |
| !! | TGAACTTACTTGAGAGCATC+AGG | + | chr5.1:65984564-65984583 | None:intergenic | 40.0% |
| !! | TTTTCTGGAGAACTCTTCGT+GGG | - | chr5.1:65982973-65982992 | MS.gene51112:CDS | 40.0% |
| !!! | GACAACACTGGTTTTGAGAA+TGG | - | chr5.1:65983923-65983942 | MS.gene51112:intron | 40.0% |
| !!! | TTTTGGTTTTTGACGGACAC+TGG | - | chr5.1:65984385-65984404 | MS.gene51112:intron | 40.0% |
| AATAGGACCATGACTGGGTT+TGG | + | chr5.1:65982931-65982950 | None:intergenic | 45.0% | |
| AATTGTCTGCTGAGGTTGGA+TGG | - | chr5.1:65984833-65984852 | MS.gene51112:intron | 45.0% | |
| ATTCCACACAAGACAAAGCG+TGG | - | chr5.1:65984462-65984481 | MS.gene51112:intron | 45.0% | |
| GAGGGAGCCCTAAAATGAAT+AGG | + | chr5.1:65982948-65982967 | None:intergenic | 45.0% | |
| GGACACAAATTCTGTCTGCT+TGG | - | chr5.1:65984808-65984827 | MS.gene51112:intron | 45.0% | |
| TCTACATGCTTTACCTGACG+TGG | + | chr5.1:65983770-65983789 | None:intergenic | 45.0% | |
| ! | ATGTCAGATAGAGGCTCTAG+CGG | - | chr5.1:65984222-65984241 | MS.gene51112:intron | 45.0% |
| ! | GATTTGTATGTCTGGTGGAC+TGG | - | chr5.1:65982857-65982876 | MS.gene51112:intron | 45.0% |
| ! | GCTAGGTTGAAGGTCTATGA+AGG | - | chr5.1:65984498-65984517 | MS.gene51112:intron | 45.0% |
| ! | GTTTAGGGTTGTCATCTGGT+CGG | - | chr5.1:65983409-65983428 | MS.gene51112:intron | 45.0% |
| GCTTGGACAATTGTCTGCTG+AGG | - | chr5.1:65984825-65984844 | MS.gene51112:intron | 50.0% | |
| GGACAATTGTCTGCTGAGGT+TGG | - | chr5.1:65984829-65984848 | MS.gene51112:intron | 50.0% | |
| TCTCCACGCTTTGTCTTGTG+TGG | + | chr5.1:65984468-65984487 | None:intergenic | 50.0% | |
| ! | AGCTGCTCTTGCTAGGTTGA+AGG | - | chr5.1:65984488-65984507 | MS.gene51112:intron | 50.0% |
| ! | TTGTCAGATGGAGGCTCTAG+CGG | - | chr5.1:65983812-65983831 | MS.gene51112:intron | 50.0% |
| !! | GTATGTCTGGTGGACTGGTT+AGG | - | chr5.1:65982862-65982881 | MS.gene51112:intron | 50.0% |
| !!! | GGGCTCCCTCTAAGATTTTC+TGG | - | chr5.1:65982958-65982977 | MS.gene51112:intron | 50.0% |
| ACGCTAACCGACCTAGCATG+TGG | + | chr5.1:65982779-65982798 | None:intergenic | 55.0% | |
| CTAACCGACCTAGCATGTGG+TGG | + | chr5.1:65982776-65982795 | None:intergenic | 55.0% | |
| GACTCTCTTTGCACATGCGC+CGG | + | chr5.1:65982739-65982758 | None:intergenic | 55.0% | |
| GTGGAGAAGCTGCTCTTGCT+AGG | - | chr5.1:65984481-65984500 | MS.gene51112:intron | 55.0% | |
| CTCGCCACCACATGCTAGGT+CGG | - | chr5.1:65982769-65982788 | MS.gene51112:CDS | 60.0% | |
| GACGCTCGCCACCACATGCT+AGG | - | chr5.1:65982765-65982784 | MS.gene51112:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 65982723 | 65985116 | 65982723 | ID=MS.gene51112 |
| chr5.1 | mRNA | 65982723 | 65985116 | 65982723 | ID=MS.gene51112.t1;Parent=MS.gene51112 |
| chr5.1 | exon | 65984845 | 65985116 | 65984845 | ID=MS.gene51112.t1.exon1;Parent=MS.gene51112.t1 |
| chr5.1 | CDS | 65984845 | 65985116 | 65984845 | ID=cds.MS.gene51112.t1;Parent=MS.gene51112.t1 |
| chr5.1 | exon | 65983265 | 65983381 | 65983265 | ID=MS.gene51112.t1.exon2;Parent=MS.gene51112.t1 |
| chr5.1 | CDS | 65983265 | 65983381 | 65983265 | ID=cds.MS.gene51112.t1;Parent=MS.gene51112.t1 |
| chr5.1 | exon | 65982963 | 65983050 | 65982963 | ID=MS.gene51112.t1.exon3;Parent=MS.gene51112.t1 |
| chr5.1 | CDS | 65982963 | 65983050 | 65982963 | ID=cds.MS.gene51112.t1;Parent=MS.gene51112.t1 |
| chr5.1 | exon | 65982723 | 65982866 | 65982723 | ID=MS.gene51112.t1.exon4;Parent=MS.gene51112.t1 |
| chr5.1 | CDS | 65982723 | 65982866 | 65982723 | ID=cds.MS.gene51112.t1;Parent=MS.gene51112.t1 |
| Gene Sequence |
| Protein sequence |
