AlfalfaGEDB | MS.gene66089

M. sativa cultivar XinJiangDaYe / MS.gene66089

KEGG: K02872
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0015934 GO:0019538 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF00572.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66089.t1	XP_013448778.1	99.5	206	1	0	1	206	1	206	4.70E-110	407.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66089.t1	Q9FKC0	85.9	206	29	0	1	206	1	206	2.5e-99	362.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66089.t1	B7FGF9	99.5	206	1	0	1	206	1	206	3.4e-110	407.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049140	MS.gene66089	0.802006	6.88E-49	-1.69E-46
MS.gene049166	MS.gene66089	0.816867	4.43E-52	-1.69E-46
MS.gene049255	MS.gene66089	0.838152	3.41E-57	-1.69E-46
MS.gene049341	MS.gene66089	0.815725	7.98E-52	-1.69E-46
MS.gene049411	MS.gene66089	0.803137	4.02E-49	-1.69E-46
MS.gene049756	MS.gene66089	0.8111	8.29E-51	-1.69E-46
MS.gene049857	MS.gene66089	0.823542	1.31E-53	-1.69E-46
MS.gene049887	MS.gene66089	0.841756	3.92E-58	-1.69E-46
MS.gene050085	MS.gene66089	0.804421	2.18E-49	-1.69E-46
MS.gene050114	MS.gene66089	0.801118	1.05E-48	-1.69E-46
MS.gene050277	MS.gene66089	0.889774	1.79E-73	-1.69E-46
MS.gene050317	MS.gene66089	0.836989	6.77E-57	-1.69E-46
MS.gene050320	MS.gene66089	0.846875	1.65E-59	-1.69E-46
MS.gene050689	MS.gene66089	0.836191	1.08E-56	-1.69E-46
MS.gene050752	MS.gene66089	0.849694	2.74E-60	-1.69E-46
MS.gene050838	MS.gene66089	0.904883	7.70E-80	-1.69E-46
MS.gene050955	MS.gene66089	0.806733	7.13E-50	-1.69E-46
MS.gene051003	MS.gene66089	0.821145	4.72E-53	-1.69E-46
MS.gene051063	MS.gene66089	0.856834	2.46E-62	-1.69E-46
MS.gene051233	MS.gene66089	0.833308	5.74E-56	-1.69E-46
MS.gene051234	MS.gene66089	0.838713	2.44E-57	-1.69E-46
MS.gene051245	MS.gene66089	0.83691	7.09E-57	-1.69E-46
MS.gene051328	MS.gene66089	0.81737	3.42E-52	-1.69E-46
MS.gene051330	MS.gene66089	0.821352	4.23E-53	-1.69E-46
MS.gene051343	MS.gene66089	0.811345	7.34E-51	-1.69E-46
MS.gene05134	MS.gene66089	0.845035	5.22E-59	-1.69E-46
MS.gene051451	MS.gene66089	0.856179	3.83E-62	-1.69E-46
MS.gene051676	MS.gene66089	0.800465	1.42E-48	-1.69E-46
MS.gene051687	MS.gene66089	0.800144	1.65E-48	-1.69E-46
MS.gene051700	MS.gene66089	0.802995	4.31E-49	-1.69E-46
MS.gene051746	MS.gene66089	0.91636	1.96E-85	-1.69E-46
MS.gene051748	MS.gene66089	0.919349	5.03E-87	-1.69E-46
MS.gene051756	MS.gene66089	0.857953	1.15E-62	-1.69E-46
MS.gene051757	MS.gene66089	0.815692	8.12E-52	-1.69E-46
MS.gene051850	MS.gene66089	0.894314	2.77E-75	-1.69E-46
MS.gene05188	MS.gene66089	0.835623	1.51E-56	-1.69E-46
MS.gene051903	MS.gene66089	0.91762	4.25E-86	-1.69E-46
MS.gene051975	MS.gene66089	0.813898	2.03E-51	-1.69E-46
MS.gene052133	MS.gene66089	0.809594	1.75E-50	-1.69E-46
MS.gene052202	MS.gene66089	0.810292	1.24E-50	-1.69E-46
MS.gene052286	MS.gene66089	0.809623	1.73E-50	-1.69E-46
MS.gene052302	MS.gene66089	0.801793	7.61E-49	-1.69E-46
MS.gene052335	MS.gene66089	0.806578	7.69E-50	-1.69E-46
MS.gene052397	MS.gene66089	0.800738	1.25E-48	-1.69E-46
MS.gene052434	MS.gene66089	0.827502	1.51E-54	-1.69E-46
MS.gene052527	MS.gene66089	0.810713	1.01E-50	-1.69E-46
MS.gene052818	MS.gene66089	-0.807489	4.93E-50	-1.69E-46
MS.gene052947	MS.gene66089	0.902738	7.13E-79	-1.69E-46
MS.gene053058	MS.gene66089	0.844388	7.80E-59	-1.69E-46
MS.gene053109	MS.gene66089	0.885708	6.44E-72	-1.69E-46
MS.gene053381	MS.gene66089	0.84591	3.02E-59	-1.69E-46
MS.gene05380	MS.gene66089	0.8022	6.28E-49	-1.69E-46
MS.gene053952	MS.gene66089	0.918243	1.98E-86	-1.69E-46
MS.gene054403	MS.gene66089	0.846288	2.39E-59	-1.69E-46
MS.gene05469	MS.gene66089	0.814305	1.65E-51	-1.69E-46
MS.gene054937	MS.gene66089	0.848147	7.37E-60	-1.69E-46
MS.gene055162	MS.gene66089	0.843278	1.55E-58	-1.69E-46
MS.gene055174	MS.gene66089	0.807281	5.46E-50	-1.69E-46
MS.gene055311	MS.gene66089	0.809961	1.46E-50	-1.69E-46
MS.gene055424	MS.gene66089	0.872498	3.04E-67	-1.69E-46
MS.gene055441	MS.gene66089	0.80577	1.14E-49	-1.69E-46
MS.gene055591	MS.gene66089	-0.810165	1.32E-50	-1.69E-46
MS.gene055780	MS.gene66089	0.818079	2.36E-52	-1.69E-46
MS.gene055979	MS.gene66089	0.814899	1.22E-51	-1.69E-46
MS.gene056043	MS.gene66089	-0.809382	1.94E-50	-1.69E-46
MS.gene056075	MS.gene66089	0.868084	8.49E-66	-1.69E-46
MS.gene056181	MS.gene66089	0.802833	4.65E-49	-1.69E-46
MS.gene056403	MS.gene66089	0.810773	9.76E-51	-1.69E-46
MS.gene056432	MS.gene66089	0.864194	1.45E-64	-1.69E-46
MS.gene056580	MS.gene66089	0.823859	1.10E-53	-1.69E-46
MS.gene056601	MS.gene66089	0.835092	2.05E-56	-1.69E-46
MS.gene056605	MS.gene66089	0.80537	1.38E-49	-1.69E-46
MS.gene056631	MS.gene66089	0.871416	6.95E-67	-1.69E-46
MS.gene056986	MS.gene66089	0.817908	2.58E-52	-1.69E-46
MS.gene056992	MS.gene66089	0.800168	1.64E-48	-1.69E-46
MS.gene057057	MS.gene66089	0.883351	4.83E-71	-1.69E-46
MS.gene057094	MS.gene66089	0.929167	1.02E-92	-1.69E-46
MS.gene057140	MS.gene66089	0.827842	1.25E-54	-1.69E-46
MS.gene057234	MS.gene66089	0.893101	8.60E-75	-1.69E-46
MS.gene057705	MS.gene66089	0.842828	2.04E-58	-1.69E-46
MS.gene05781	MS.gene66089	0.823624	1.25E-53	-1.69E-46
MS.gene057999	MS.gene66089	0.824057	9.92E-54	-1.69E-46
MS.gene058054	MS.gene66089	0.823778	1.15E-53	-1.69E-46
MS.gene058055	MS.gene66089	0.858113	1.03E-62	-1.69E-46
MS.gene058074	MS.gene66089	0.834463	2.95E-56	-1.69E-46
MS.gene05809	MS.gene66089	0.826321	2.89E-54	-1.69E-46
MS.gene058238	MS.gene66089	0.861664	8.75E-64	-1.69E-46
MS.gene058646	MS.gene66089	0.802314	5.95E-49	-1.69E-46
MS.gene058654	MS.gene66089	0.821245	4.47E-53	-1.69E-46
MS.gene058852	MS.gene66089	0.802599	5.20E-49	-1.69E-46
MS.gene058906	MS.gene66089	0.872242	3.70E-67	-1.69E-46
MS.gene059146	MS.gene66089	0.80773	4.38E-50	-1.69E-46
MS.gene059171	MS.gene66089	0.848951	4.42E-60	-1.69E-46
MS.gene059227	MS.gene66089	0.818588	1.81E-52	-1.69E-46
MS.gene059360	MS.gene66089	0.805023	1.63E-49	-1.69E-46
MS.gene059726	MS.gene66089	0.854775	9.83E-62	-1.69E-46
MS.gene05978	MS.gene66089	0.817845	2.67E-52	-1.69E-46
MS.gene059898	MS.gene66089	0.862969	3.48E-64	-1.69E-46
MS.gene06001	MS.gene66089	0.923871	1.50E-89	-1.69E-46
MS.gene06011	MS.gene66089	0.869256	3.55E-66	-1.69E-46
MS.gene060463	MS.gene66089	0.874729	5.38E-68	-1.69E-46
MS.gene060465	MS.gene66089	0.879429	1.26E-69	-1.69E-46
MS.gene060702	MS.gene66089	0.825822	3.80E-54	-1.69E-46
MS.gene060763	MS.gene66089	0.867455	1.35E-65	-1.69E-46
MS.gene060830	MS.gene66089	0.805441	1.33E-49	-1.69E-46
MS.gene060917	MS.gene66089	0.802352	5.84E-49	-1.69E-46
MS.gene061145	MS.gene66089	0.891114	5.34E-74	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene98888	MS.gene66089	PPI
MS.gene66089	MS.gene065402	PPI
MS.gene66089	MS.gene063366	PPI
MS.gene66089	MS.gene63973	PPI
MS.gene66089	MS.gene09188	PPI
MS.gene66089	MS.gene90954	PPI
MS.gene66089	MS.gene000714	PPI
MS.gene66089	MS.gene060216	PPI
MS.gene66089	MS.gene29720	PPI
MS.gene66089	MS.gene08260	PPI
MS.gene66089	MS.gene065401	PPI
MS.gene66089	MS.gene039110	PPI
MS.gene66089	MS.gene09187	PPI
MS.gene66089	MS.gene33879	PPI
MS.gene66089	MS.gene94182	PPI
MS.gene66089	MS.gene63721	PPI
MS.gene66089	MS.gene90957	PPI
MS.gene66089	MS.gene52097	PPI
MS.gene66089	MS.gene51112	PPI
MS.gene66089	MS.gene09046	PPI
MS.gene66089	MS.gene057730	PPI
MS.gene66089	MS.gene051416	PPI
MS.gene66089	MS.gene27028	PPI
MS.gene66089	MS.gene31729	PPI
MS.gene66089	MS.gene023381	PPI
MS.gene66089	MS.gene98888	PPI
MS.gene066163	MS.gene66089	PPI
MS.gene66089	MS.gene65076	PPI
MS.gene66089	MS.gene24199	PPI
MS.gene040581	MS.gene66089	PPI
MS.gene66089	MS.gene066996	PPI
MS.gene66089	MS.gene32419	PPI
MS.gene66089	MS.gene029745	PPI
MS.gene66089	MS.gene47429	PPI
MS.gene66089	MS.gene08259	PPI
MS.gene66089	MS.gene003501	PPI

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66089.t1	MTR_7g057770	99.515	206	1	1	206	1	206	5.69e-152	419
MS.gene66089.t1	MTR_1g023590	94.660	206	11	1	206	1	206	1.22e-143	399
MS.gene66089.t1	MTR_5g083790	90.291	206	20	1	206	1	206	8.25e-138	384

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene66089.t1	AT5G48760	85.922	206	29	0	1	206	1	206	1.34e-133	373
MS.gene66089.t1	AT5G48760	85.922	206	29	0	1	206	1	206	1.34e-133	373
MS.gene66089.t1	AT4G13170	83.981	206	33	0	1	206	1	206	2.84e-131	367
MS.gene66089.t1	AT3G07110	83.981	206	33	0	1	206	1	206	3.10e-131	367
MS.gene66089.t1	AT3G24830	82.524	206	36	0	1	206	1	206	7.54e-130	363
MS.gene66089.t1	AT3G07110	83.575	207	33	1	1	206	1	207	2.31e-129	362

Find 58 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGGCTCCCAGTAAGATCTTT+TGG	0.302766	7.4:+45285028	MS.gene66089:CDS
GTGCTTCTGGTGGTCTTGTT+AGG	0.322378	7.4:+45284932	MS.gene66089:CDS
TGAAGTATATGAGATTTCTT+AGG	0.358557	7.4:+45284962	MS.gene66089:CDS
AACAAAATAACTCACCTTGA+TGG	0.377070	7.4:-45286070	None:intergenic
TGTGAAGAGATTTGTGCTTC+TGG	0.391599	7.4:+45284919	MS.gene66089:CDS
GATGCAAGGCACCACATGTT+AGG	0.408002	7.4:+45284835	MS.gene66089:CDS
CTGGGAGCCCTAAAATGAAT+AGG	0.417019	7.4:-45285015	None:intergenic
TAGGGTGTTGAGGCTTCAAA+AGG	0.434306	7.4:+45285987	MS.gene66089:intron
AAATACTACTCAGTACTTAA+CGG	0.437826	7.4:-45286298	None:intergenic
CTCCATATGACAAAATTAAG+AGG	0.448931	7.4:+45285868	MS.gene66089:CDS
GTGGAGAGGCAGCACTTGCC+AGG	0.449422	7.4:+45285820	MS.gene66089:CDS
AATACTTACTTAAGAGCATC+AGG	0.452121	7.4:-45285900	None:intergenic
TGCCAGGATGAAGGTGTATG+AGG	0.452984	7.4:+45285836	MS.gene66089:CDS
AATACTACTCAGTACTTAAC+GGG	0.453354	7.4:-45286297	None:intergenic
CGGGAGCAAGAATTTCAAGT+TGG	0.456903	7.4:-45286278	None:intergenic
GGGAGCAAGAATTTCAAGTT+GGG	0.464166	7.4:-45286277	None:intergenic
AGTACGCCAAAAGATCTTAC+TGG	0.471106	7.4:-45285034	None:intergenic
ATATGAGATTTCTTAGGAAG+AGG	0.471394	7.4:+45284968	MS.gene66089:CDS
AGAAGCAGATCAATAAATTG+AGG	0.485847	7.4:+45286217	MS.gene66089:CDS
GGACACAAATACTGCACCCT+TGG	0.514031	7.4:+45286009	MS.gene66089:CDS
AATTATCCGCAGAGGTTGGA+TGG	0.517619	7.4:+45286034	MS.gene66089:CDS
TGGAGACAAAGAGGAAGGAA+AGG	0.523797	7.4:+45286172	MS.gene66089:CDS
GAAGCAGATCAATAAATTGA+GGG	0.524740	7.4:+45286218	MS.gene66089:CDS
GGCAGCACTTGCCAGGATGA+AGG	0.530213	7.4:+45285827	MS.gene66089:CDS
TCTCCACGCTTTGTCTTGTG+TGG	0.531934	7.4:-45285804	None:intergenic
GTTGCAAAGGAGCTTCTCAA+TGG	0.552197	7.4:+45284874	MS.gene66089:CDS
GGACAATTATCCGCAGAGGT+TGG	0.557219	7.4:+45286030	MS.gene66089:CDS
ATAACTCACCTTGATGGTGC+CGG	0.561236	7.4:-45286064	None:intergenic
ACCCTCATACACCTTCATCC+TGG	0.561860	7.4:-45285838	None:intergenic
TGGTTGAAATTAGGGTGTTG+AGG	0.577187	7.4:+45285977	MS.gene66089:intron
GAACTACGCCGGCACCATCA+AGG	0.577844	7.4:+45286056	MS.gene66089:CDS
AACAGGAGCTGGAGACAAAG+AGG	0.580730	7.4:+45286163	MS.gene66089:intron
ACTTGCCTCCATCGTTGCAA+AGG	0.580774	7.4:+45284861	MS.gene66089:CDS
GAGAAGCTCCTTTGCAACGA+TGG	0.584142	7.4:-45284869	None:intergenic
ATATGACAAAATTAAGAGGA+TGG	0.585968	7.4:+45285872	MS.gene66089:CDS
GAAGAGATTTGTGCTTCTGG+TGG	0.586152	7.4:+45284922	MS.gene66089:CDS
GCCAGGATGAAGGTGTATGA+GGG	0.597406	7.4:+45285837	MS.gene66089:CDS
GGAGACAAAGAGGAAGGAAA+GGG	0.597942	7.4:+45286173	MS.gene66089:CDS
GTACGCCAAAAGATCTTACT+GGG	0.598293	7.4:-45285033	None:intergenic
GGAGCTTCTCAATGGTCAGA+AGG	0.600116	7.4:+45284882	MS.gene66089:CDS
ATGAACACAAAGCCTTCTCA+TGG	0.602489	7.4:+45284991	MS.gene66089:CDS
AGGTATCTGCGCAAAGAGGG+TGG	0.610561	7.4:+45284807	MS.gene66089:CDS
TTCAGGTATCTGCGCAAAGA+GGG	0.610853	7.4:+45284804	MS.gene66089:CDS
CCTCTGCGGATAATTGTCCA+AGG	0.614344	7.4:-45286026	None:intergenic
AGGGTGTTGAGGCTTCAAAA+GGG	0.617854	7.4:+45285988	MS.gene66089:intron
AGAGGGTGGTGATCGATGCA+AGG	0.618099	7.4:+45284821	MS.gene66089:CDS
GGAGCTGGAGACAAAGAGGA+AGG	0.618380	7.4:+45286167	MS.gene66089:intron
GTTCAGGTATCTGCGCAAAG+AGG	0.631106	7.4:+45284803	MS.gene66089:CDS
ATTCCACACAAGACAAAGCG+TGG	0.632644	7.4:+45285801	MS.gene66089:CDS
AAGCTCCTTTGCAACGATGG+AGG	0.638563	7.4:-45284866	None:intergenic
GGAGCAAGAATTTCAAGTTG+GGG	0.639957	7.4:-45286276	None:intergenic
CTCTGCGGATAATTGTCCAA+GGG	0.646384	7.4:-45286025	None:intergenic
AAATGAATAGGACCATGAGA+AGG	0.655070	7.4:-45285003	None:intergenic
ACACAAGACAAAGCGTGGAG+AGG	0.661685	7.4:+45285806	MS.gene66089:CDS
GAGGTTGGATGGAACTACGC+CGG	0.675697	7.4:+45286045	MS.gene66089:CDS
CCTTGGACAATTATCCGCAG+AGG	0.677671	7.4:+45286026	MS.gene66089:CDS
AGGCAAGTCTACCTAACATG+TGG	0.695141	7.4:-45284846	None:intergenic
GTAGTTCCATCCAACCTCTG+CGG	0.753253	7.4:-45286040	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CTGTTTTTATTGTTATAATT+TGG	+	chr7.4:45285417-45285436	MS.gene66089:intron	15.0%
!!!	TATTGTTAAATGTTTGTTAT+TGG	+	chr7.4:45285293-45285312	MS.gene66089:intron	15.0%
!!	TTGTATTTGATAAATATCTG+CGG	+	chr7.4:45286113-45286132	MS.gene66089:intron	20.0%
!!!	TAGGTTGTTGTTTTTTTAAA+TGG	+	chr7.4:45285212-45285231	MS.gene66089:intron	20.0%
!!!	TATTGTTATAATTTGGTGAA+TGG	+	chr7.4:45285424-45285443	MS.gene66089:intron	20.0%
!!!	TGATTATTGTGTTCTTTTTT+GGG	+	chr7.4:45285506-45285525	MS.gene66089:intron	20.0%
!!!	TTAAATGTTTGTTATTGGTT+TGG	+	chr7.4:45285298-45285317	MS.gene66089:intron	20.0%
!!!	TTAATTTTTCACTTGTTAAC+AGG	+	chr7.4:45286146-45286165	MS.gene66089:intron	20.0%
!!!	TTGATTATTGTGTTCTTTTT+TGG	+	chr7.4:45285505-45285524	MS.gene66089:intron	20.0%
!!!	TTTTTGTTAAATCGCATTTT+TGG	+	chr7.4:45285098-45285117	MS.gene66089:intron	20.0%
!	ATATGACAAAATTAAGAGGA+TGG	+	chr7.4:45285872-45285891	MS.gene66089:CDS	25.0%
!	TGAAGTATATGAGATTTCTT+AGG	+	chr7.4:45284962-45284981	MS.gene66089:CDS	25.0%
!!	ACTGCATTTTTGATATTACT+AGG	+	chr7.4:45285151-45285170	MS.gene66089:intron	25.0%
!!	ATCCTCTTAATTTTGTCATA+TGG	-	chr7.4:45285873-45285892	None:intergenic	25.0%
!!!	ATTATTGTGTTCTTTTTTGG+GGG	+	chr7.4:45285508-45285527	MS.gene66089:intron	25.0%
!!!	GATTATTGTGTTCTTTTTTG+GGG	+	chr7.4:45285507-45285526	MS.gene66089:intron	25.0%
!!!	TATTACTAGGTTGTTGTTTT+CGG	+	chr7.4:45285122-45285141	MS.gene66089:intron	25.0%
!!!	TTCGCATTTTTGATAATACT+AGG	+	chr7.4:45285193-45285212	MS.gene66089:intron	25.0%
!!!	TTTTAACGTGGATTTGTTTA+AGG	+	chr7.4:45285326-45285345	MS.gene66089:intron	25.0%
	AACAAAATAACTCACCTTGA+TGG	-	chr7.4:45286073-45286092	None:intergenic	30.0%
	AGAAGCAGATCAATAAATTG+AGG	+	chr7.4:45286217-45286236	MS.gene66089:CDS	30.0%
	ATATGAGATTTCTTAGGAAG+AGG	+	chr7.4:45284968-45284987	MS.gene66089:CDS	30.0%
	CTCCATATGACAAAATTAAG+AGG	+	chr7.4:45285868-45285887	MS.gene66089:CDS	30.0%
	GAAGCAGATCAATAAATTGA+GGG	+	chr7.4:45286218-45286237	MS.gene66089:CDS	30.0%
	GAATTTGAATACTGAATGAG+TGG	+	chr7.4:45285957-45285976	MS.gene66089:intron	30.0%
	TGAATGAGTGGTTGAAATTA+GGG	+	chr7.4:45285969-45285988	MS.gene66089:intron	30.0%
!	CTCTTAATTTTGTCATATGG+AGG	-	chr7.4:45285870-45285889	None:intergenic	30.0%
!	TCATGGTCCTATTCATTTTA+GGG	+	chr7.4:45285008-45285027	MS.gene66089:CDS	30.0%
!	TTAATTTTGTCATATGGAGG+TGG	-	chr7.4:45285867-45285886	None:intergenic	30.0%
!!	AATACTTACTTAAGAGCATC+AGG	-	chr7.4:45285903-45285922	None:intergenic	30.0%
!!	TCGCATTTTTGGATATTACT+AGG	+	chr7.4:45285109-45285128	MS.gene66089:intron	30.0%
!!	TGAGTGATGTGTTATTGTTT+TGG	+	chr7.4:45285745-45285764	MS.gene66089:intron	30.0%
!!!	TGATGTGTTATTGTTTTGGT+GGG	+	chr7.4:45285749-45285768	MS.gene66089:intron	30.0%
!!!	TTATTGTGTTCTTTTTTGGG+GGG	+	chr7.4:45285509-45285528	MS.gene66089:intron	30.0%
!!!	TTGTTTCTGAGTTTTGTGTT+TGG	+	chr7.4:45285656-45285675	MS.gene66089:intron	30.0%
	AAATGAATAGGACCATGAGA+AGG	-	chr7.4:45285006-45285025	None:intergenic	35.0%
	CTGAATGAGTGGTTGAAATT+AGG	+	chr7.4:45285968-45285987	MS.gene66089:intron	35.0%
!	AACGTGGATTTGTTTAAGGA+TGG	+	chr7.4:45285330-45285349	MS.gene66089:intron	35.0%
!	CTCATGGTCCTATTCATTTT+AGG	+	chr7.4:45285007-45285026	MS.gene66089:CDS	35.0%
!!	TTAAGGATGGTTGTTTTCAG+AGG	+	chr7.4:45285343-45285362	MS.gene66089:intron	35.0%
!!	TTGAGTGTTGTGTTCTTTTG+TGG	+	chr7.4:45285610-45285629	MS.gene66089:intron	35.0%
!!!	AGCGTTGTGTTTTTTATTGG+AGG	+	chr7.4:45285558-45285577	MS.gene66089:intron	35.0%
!!!	GAAGCACTGTGTTTTTTTTG+TGG	+	chr7.4:45285454-45285473	MS.gene66089:intron	35.0%
!!!	GCGTTGTGTTTTTTATTGGA+GGG	+	chr7.4:45285559-45285578	MS.gene66089:intron	35.0%
!!!	GTGAGCGTTGTGTTTTTTAT+TGG	+	chr7.4:45285555-45285574	MS.gene66089:intron	35.0%
!!!	GTGATGTGTTATTGTTTTGG+TGG	+	chr7.4:45285748-45285767	MS.gene66089:intron	35.0%
!!!	TTTTGTGGTTGGTTTTTGAC+AGG	+	chr7.4:45285625-45285644	MS.gene66089:intron	35.0%
	AGTACGCCAAAAGATCTTAC+TGG	-	chr7.4:45285037-45285056	None:intergenic	40.0%
	ATGAACACAAAGCCTTCTCA+TGG	+	chr7.4:45284991-45285010	MS.gene66089:CDS	40.0%
	GTACGCCAAAAGATCTTACT+GGG	-	chr7.4:45285036-45285055	None:intergenic	40.0%
	TGTGAAGAGATTTGTGCTTC+TGG	+	chr7.4:45284919-45284938	MS.gene66089:CDS	40.0%
!	GTGTTGTGTTCTTTTGTGGT+TGG	+	chr7.4:45285614-45285633	MS.gene66089:intron	40.0%
!	TTGAGCGTTGTGTTCTCTAT+TGG	+	chr7.4:45285695-45285714	MS.gene66089:intron	40.0%
!	TTTCACTTGTTAACAGGAGC+TGG	+	chr7.4:45286152-45286171	MS.gene66089:intron	40.0%
!!	GGAGCAAGAATTTCAAGTTG+GGG	-	chr7.4:45286279-45286298	None:intergenic	40.0%
!!	GGGAGCAAGAATTTCAAGTT+GGG	-	chr7.4:45286280-45286299	None:intergenic	40.0%
!!	TGGTTGAAATTAGGGTGTTG+AGG	+	chr7.4:45285977-45285996	MS.gene66089:intron	40.0%
!!!	GGTTTGGTGATCTTTTAACG+TGG	+	chr7.4:45285314-45285333	MS.gene66089:intron	40.0%
	AATTATCCGCAGAGGTTGGA+TGG	+	chr7.4:45286034-45286053	MS.gene66089:CDS	45.0%
	AGGCAAGTCTACCTAACATG+TGG	-	chr7.4:45284849-45284868	None:intergenic	45.0%
	ATTCCACACAAGACAAAGCG+TGG	+	chr7.4:45285801-45285820	MS.gene66089:CDS	45.0%
	CTCTGCGGATAATTGTCCAA+GGG	-	chr7.4:45286028-45286047	None:intergenic	45.0%
	CTGGGAGCCCTAAAATGAAT+AGG	-	chr7.4:45285018-45285037	None:intergenic	45.0%
	GAAGAGATTTGTGCTTCTGG+TGG	+	chr7.4:45284922-45284941	MS.gene66089:CDS	45.0%
	GGAGACAAAGAGGAAGGAAA+GGG	+	chr7.4:45286173-45286192	MS.gene66089:CDS	45.0%
	GTTGCAAAGGAGCTTCTCAA+TGG	+	chr7.4:45284874-45284893	MS.gene66089:CDS	45.0%
	TGGAGACAAAGAGGAAGGAA+AGG	+	chr7.4:45286172-45286191	MS.gene66089:CDS	45.0%
	TTCAGGTATCTGCGCAAAGA+GGG	+	chr7.4:45284804-45284823	MS.gene66089:CDS	45.0%
!	ATCTTTTGGCGTACTGTTCG+TGG	+	chr7.4:45285042-45285061	MS.gene66089:CDS	45.0%
!	CGGGAGCAAGAATTTCAAGT+TGG	-	chr7.4:45286281-45286300	None:intergenic	45.0%
!	TCTTTTGGCGTACTGTTCGT+GGG	+	chr7.4:45285043-45285062	MS.gene66089:CDS	45.0%
!!	AGGGTGTTGAGGCTTCAAAA+GGG	+	chr7.4:45285988-45286007	MS.gene66089:intron	45.0%
!!	ATAACTCACCTTGATGGTGC+CGG	-	chr7.4:45286067-45286086	None:intergenic	45.0%
!!	TAGGGTGTTGAGGCTTCAAA+AGG	+	chr7.4:45285987-45286006	MS.gene66089:intron	45.0%
	AACAGGAGCTGGAGACAAAG+AGG	+	chr7.4:45286163-45286182	MS.gene66089:intron	50.0%
	AAGCTCCTTTGCAACGATGG+AGG	-	chr7.4:45284869-45284888	None:intergenic	50.0%
	ACACAAGACAAAGCGTGGAG+AGG	+	chr7.4:45285806-45285825	MS.gene66089:CDS	50.0%
	ACCCTCATACACCTTCATCC+TGG	-	chr7.4:45285841-45285860	None:intergenic	50.0%
	ACTTGCCTCCATCGTTGCAA+AGG	+	chr7.4:45284861-45284880	MS.gene66089:CDS	50.0%
	CCTCTGCGGATAATTGTCCA+AGG	-	chr7.4:45286029-45286048	None:intergenic	50.0%
	CCTTGGACAATTATCCGCAG+AGG	+	chr7.4:45286026-45286045	MS.gene66089:CDS	50.0%
	GAGAAGCTCCTTTGCAACGA+TGG	-	chr7.4:45284872-45284891	None:intergenic	50.0%
	GGACAATTATCCGCAGAGGT+TGG	+	chr7.4:45286030-45286049	MS.gene66089:CDS	50.0%
	GGACACAAATACTGCACCCT+TGG	+	chr7.4:45286009-45286028	MS.gene66089:CDS	50.0%
	GGAGCTTCTCAATGGTCAGA+AGG	+	chr7.4:45284882-45284901	MS.gene66089:CDS	50.0%
	GTAGTTCCATCCAACCTCTG+CGG	-	chr7.4:45286043-45286062	None:intergenic	50.0%
	GTTCAGGTATCTGCGCAAAG+AGG	+	chr7.4:45284803-45284822	MS.gene66089:CDS	50.0%
	TCTCCACGCTTTGTCTTGTG+TGG	-	chr7.4:45285807-45285826	None:intergenic	50.0%
!	GATGCAAGGCACCACATGTT+AGG	+	chr7.4:45284835-45284854	MS.gene66089:CDS	50.0%
!	GCCAGGATGAAGGTGTATGA+GGG	+	chr7.4:45285837-45285856	MS.gene66089:CDS	50.0%
!	GGGCTCCCAGTAAGATCTTT+TGG	+	chr7.4:45285028-45285047	MS.gene66089:CDS	50.0%
!	TGCCAGGATGAAGGTGTATG+AGG	+	chr7.4:45285836-45285855	MS.gene66089:CDS	50.0%
!!	GTGCTTCTGGTGGTCTTGTT+AGG	+	chr7.4:45284932-45284951	MS.gene66089:CDS	50.0%
	AGAGGGTGGTGATCGATGCA+AGG	+	chr7.4:45284821-45284840	MS.gene66089:CDS	55.0%
	AGGTATCTGCGCAAAGAGGG+TGG	+	chr7.4:45284807-45284826	MS.gene66089:CDS	55.0%
	GAGGTTGGATGGAACTACGC+CGG	+	chr7.4:45286045-45286064	MS.gene66089:CDS	55.0%
	GGAGCTGGAGACAAAGAGGA+AGG	+	chr7.4:45286167-45286186	MS.gene66089:intron	55.0%
	GAACTACGCCGGCACCATCA+AGG	+	chr7.4:45286056-45286075	MS.gene66089:CDS	60.0%
	GGCAGCACTTGCCAGGATGA+AGG	+	chr7.4:45285827-45285846	MS.gene66089:CDS	60.0%
	GTGGAGAGGCAGCACTTGCC+AGG	+	chr7.4:45285820-45285839	MS.gene66089:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	45284793	45286311	45284793	ID=MS.gene66089
chr7.4	mRNA	45284793	45286311	45284793	ID=MS.gene66089.t1;Parent=MS.gene66089
chr7.4	exon	45284793	45285064	45284793	ID=MS.gene66089.t1.exon1;Parent=MS.gene66089.t1
chr7.4	CDS	45284793	45285064	45284793	ID=cds.MS.gene66089.t1;Parent=MS.gene66089.t1
chr7.4	exon	45285797	45285913	45285797	ID=MS.gene66089.t1.exon2;Parent=MS.gene66089.t1
chr7.4	CDS	45285797	45285913	45285797	ID=cds.MS.gene66089.t1;Parent=MS.gene66089.t1
chr7.4	exon	45285990	45286077	45285990	ID=MS.gene66089.t1.exon3;Parent=MS.gene66089.t1
chr7.4	CDS	45285990	45286077	45285990	ID=cds.MS.gene66089.t1;Parent=MS.gene66089.t1
chr7.4	exon	45286168	45286311	45286168	ID=MS.gene66089.t1.exon4;Parent=MS.gene66089.t1
chr7.4	CDS	45286168	45286311	45286168	ID=cds.MS.gene66089.t1;Parent=MS.gene66089.t1

Gene Sequence

>MS.gene66089

ATGGTGTCTGGTTCAGGTATCTGCGCAAAGAGGGTGGTGATCGATGCAAGGCACCACATGTTAGGTAGACTTGCCTCCATCGTTGCAAAGGAGCTTCTCAATGGTCAGAAGGTTGTTCTTGTTAGATGTGAAGAGATTTGTGCTTCTGGTGGTCTTGTTAGGCAGAAGATGAAGTATATGAGATTTCTTAGGAAGAGGATGAACACAAAGCCTTCTCATGGTCCTATTCATTTTAGGGCTCCCAGTAAGATCTTTTGGCGTACTGTTCGTGGGTTAGTCGCTAAATCATTCAATCTTTGTTTTTTTTTTTGTTAAATCGCATTTTTGGATATTACTAGGTTGTTGTTTTCGGTTAAAAACTGCATTTTTGATATTACTAGGTTGTCGTTTTAATTCATAATTCGCATTTTTGATAATACTAGGTTGTTGTTTTTTTAAATGGTTGCAATTATTTTGCTAGATCTTGTGAGTTTTTATGTTGTGTATATGTTATTTATGTTTATTGTTAAATGTTTGTTATTGGTTTGGTGATCTTTTAACGTGGATTTGTTTAAGGATGGTTGTTTTCAGAGGTTGAATGTCTCTGTTTGTTTGATTGATTTGTTAAATTTTTATGAATAAATGCTGTTTTTATTGTTATAATTTGGTGAATGGTTTTTCAGAAGCACTGTGTTTTTTTTGTGGAGTTTTTGAGCAGTAATCAATGTTGTTATTGATTATTGTGTTCTTTTTTGGGGGGTTTGAGAAGTAATCTTGTTGTTTGTGAGCGTTGTGTTTTTTATTGGAGGGTTTTTGAGTATTTATGCTGTTAGCAGTGTTGAGTGTTGTGTTCTTTTGTGGTTGGTTTTTGACAGGTTATGATCTTGTTTCTGAGTTTTGTGTTTGGAGAAGTGTTTTTGTTTTTGAGCGTTGTGTTCTCTATTGGAGAGTTTTTGACAATTGATGTTGTTCTTGAGTGATGTGTTATTGTTTTGGTGGGTTTATGAATAGTTGTGTTTATGTAGAATGATTCCACACAAGACAAAGCGTGGAGAGGCAGCACTTGCCAGGATGAAGGTGTATGAGGGTATTCCACCTCCATATGACAAAATTAAGAGGATGGTTGTTCCTGATGCTCTTAAGTAAGTATTATTTCGACGATGAATTAGAATTTTTATTGAATTTGAATTTGAATACTGAATGAGTGGTTGAAATTAGGGTGTTGAGGCTTCAAAAGGGACACAAATACTGCACCCTTGGACAATTATCCGCAGAGGTTGGATGGAACTACGCCGGCACCATCAAGGTGAGTTATTTTGTTTATGTTTGAAGTTTTCTTCTTTGTATTTGATAAATATCTGCGGTTCTTAAGTTTTAATTTTTCACTTGTTAACAGGAGCTGGAGACAAAGAGGAAGGAAAGGGCTTTTGCTGCTTATGAGAAAAAGAAGCAGATCAATAAATTGAGGGCTAAAGCAGAGAAGATCGTAGACGAGAAGCTTGCTCCCCAACTTGAAATTCTTGCTCCCGTTAAGTACTGA

Protein sequence

>MS.gene66089.t1

MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICASGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGEAALARMKVYEGIPPPYDKIKRMVVPDALKVLRLQKGHKYCTLGQLSAEVGWNYAGTIKELETKRKERAFAAYEKKKQINKLRAKAEKIVDEKLAPQLEILAPVKY