Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32182.t1 | XP_003608188.2 | 95.6 | 321 | 4 | 1 | 1 | 321 | 1 | 311 | 5.40E-153 | 550.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32182.t1 | A2YMP7 | 73.0 | 322 | 70 | 4 | 1 | 321 | 1 | 306 | 2.3e-112 | 406.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32182.t1 | G7JQS3 | 95.6 | 321 | 4 | 1 | 1 | 321 | 1 | 311 | 3.9e-153 | 550.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene32182 | 0.821608 | 3.69E-53 | -1.69E-46 |
| MS.gene04920 | MS.gene32182 | 0.808892 | 2.48E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene32182 | 0.815849 | 7.49E-52 | -1.69E-46 |
| MS.gene049283 | MS.gene32182 | 0.807168 | 5.77E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene32182 | 0.829821 | 4.15E-55 | -1.69E-46 |
| MS.gene049807 | MS.gene32182 | 0.818194 | 2.23E-52 | -1.69E-46 |
| MS.gene050238 | MS.gene32182 | 0.807229 | 5.60E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene32182 | 0.801602 | 8.34E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene32182 | 0.832715 | 8.07E-56 | -1.69E-46 |
| MS.gene051201 | MS.gene32182 | 0.800547 | 1.37E-48 | -1.69E-46 |
| MS.gene051538 | MS.gene32182 | 0.810478 | 1.13E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene32182 | 0.833829 | 4.26E-56 | -1.69E-46 |
| MS.gene05191 | MS.gene32182 | 0.831106 | 2.01E-55 | -1.69E-46 |
| MS.gene052016 | MS.gene32182 | 0.813977 | 1.95E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene32182 | 0.810263 | 1.26E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene32182 | 0.817681 | 2.91E-52 | -1.69E-46 |
| MS.gene052533 | MS.gene32182 | 0.840414 | 8.82E-58 | -1.69E-46 |
| MS.gene052570 | MS.gene32182 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene32182 | 0.813644 | 2.31E-51 | -1.69E-46 |
| MS.gene053272 | MS.gene32182 | -0.857458 | 1.61E-62 | -1.69E-46 |
| MS.gene054178 | MS.gene32182 | 0.818628 | 1.77E-52 | -1.69E-46 |
| MS.gene054222 | MS.gene32182 | 0.813471 | 2.52E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene32182 | 0.801673 | 8.06E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene32182 | 0.830606 | 2.67E-55 | -1.69E-46 |
| MS.gene054893 | MS.gene32182 | 0.8343 | 3.25E-56 | -1.69E-46 |
| MS.gene055150 | MS.gene32182 | 0.813764 | 2.17E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene32182 | 0.839682 | 1.37E-57 | -1.69E-46 |
| MS.gene05552 | MS.gene32182 | 0.800592 | 1.34E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene32182 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene05624 | MS.gene32182 | 0.8174 | 3.36E-52 | -1.69E-46 |
| MS.gene056677 | MS.gene32182 | 0.813275 | 2.78E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene32182 | 0.809711 | 1.65E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene32182 | 0.832477 | 9.24E-56 | -1.69E-46 |
| MS.gene057102 | MS.gene32182 | 0.864087 | 1.56E-64 | -1.69E-46 |
| MS.gene057208 | MS.gene32182 | 0.802358 | 5.83E-49 | -1.69E-46 |
| MS.gene058095 | MS.gene32182 | 0.846541 | 2.04E-59 | -1.69E-46 |
| MS.gene058159 | MS.gene32182 | 0.821686 | 3.54E-53 | -1.69E-46 |
| MS.gene058355 | MS.gene32182 | 0.821012 | 5.06E-53 | -1.69E-46 |
| MS.gene058974 | MS.gene32182 | 0.836788 | 7.62E-57 | -1.69E-46 |
| MS.gene05897 | MS.gene32182 | 0.803375 | 3.59E-49 | -1.69E-46 |
| MS.gene059145 | MS.gene32182 | 0.809131 | 2.20E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene32182 | 0.816894 | 4.37E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene32182 | 0.833911 | 4.06E-56 | -1.69E-46 |
| MS.gene059621 | MS.gene32182 | 0.811327 | 7.40E-51 | -1.69E-46 |
| MS.gene059634 | MS.gene32182 | 0.81702 | 4.10E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene32182 | -0.861093 | 1.31E-63 | -1.69E-46 |
| MS.gene059965 | MS.gene32182 | 0.801366 | 9.31E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene32182 | 0.812491 | 4.13E-51 | -1.69E-46 |
| MS.gene060522 | MS.gene32182 | 0.817536 | 3.13E-52 | -1.69E-46 |
| MS.gene060777 | MS.gene32182 | 0.823276 | 1.51E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene32182 | 0.808667 | 2.77E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene32182 | 0.821142 | 4.72E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene32182 | 0.834812 | 2.41E-56 | -1.69E-46 |
| MS.gene061100 | MS.gene32182 | 0.861166 | 1.24E-63 | -1.69E-46 |
| MS.gene061160 | MS.gene32182 | 0.850835 | 1.31E-60 | -1.69E-46 |
| MS.gene061188 | MS.gene32182 | 0.836351 | 9.85E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32182.t1 | MTR_4g090510 | 95.950 | 321 | 3 | 1 | 1 | 321 | 1 | 311 | 0.0 | 628 |
| MS.gene32182.t1 | MTR_2g012560 | 74.920 | 311 | 45 | 3 | 1 | 311 | 1 | 278 | 3.54e-169 | 471 |
| MS.gene32182.t1 | MTR_2g012560 | 72.669 | 311 | 43 | 4 | 1 | 311 | 1 | 269 | 7.01e-160 | 447 |
| MS.gene32182.t1 | MTR_2g090115 | 65.723 | 318 | 94 | 2 | 4 | 321 | 5 | 307 | 1.83e-159 | 447 |
| MS.gene32182.t1 | MTR_4g046110 | 69.782 | 321 | 79 | 4 | 3 | 321 | 2 | 306 | 4.74e-149 | 421 |
| MS.gene32182.t1 | MTR_5g027790 | 55.556 | 306 | 90 | 6 | 1 | 301 | 1 | 265 | 1.98e-116 | 337 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32182.t1 | AT1G61250 | 66.873 | 323 | 69 | 6 | 1 | 320 | 1 | 288 | 5.20e-156 | 438 |
| MS.gene32182.t1 | AT1G11180 | 66.769 | 325 | 68 | 5 | 1 | 320 | 1 | 290 | 6.56e-155 | 435 |
| MS.gene32182.t1 | AT1G11180 | 64.923 | 325 | 67 | 5 | 1 | 320 | 1 | 283 | 1.25e-148 | 419 |
| MS.gene32182.t1 | AT1G11180 | 62.426 | 338 | 67 | 5 | 1 | 320 | 1 | 296 | 2.38e-146 | 414 |
| MS.gene32182.t1 | AT1G61250 | 67.698 | 291 | 66 | 5 | 1 | 288 | 1 | 266 | 2.84e-143 | 405 |
| MS.gene32182.t1 | AT2G20840 | 65.831 | 319 | 71 | 4 | 3 | 321 | 2 | 282 | 2.44e-141 | 400 |
| MS.gene32182.t1 | AT1G03550 | 59.875 | 319 | 91 | 3 | 3 | 321 | 2 | 283 | 1.78e-133 | 381 |
| MS.gene32182.t1 | AT2G20840 | 73.494 | 249 | 56 | 1 | 73 | 321 | 1 | 239 | 5.54e-128 | 365 |
| MS.gene32182.t1 | AT2G20840 | 73.494 | 249 | 56 | 1 | 73 | 321 | 1 | 239 | 5.54e-128 | 365 |
| MS.gene32182.t1 | AT1G03550 | 61.702 | 282 | 81 | 2 | 3 | 284 | 2 | 256 | 1.68e-122 | 352 |
| MS.gene32182.t1 | AT1G32050 | 54.934 | 304 | 94 | 6 | 1 | 302 | 1 | 263 | 2.91e-114 | 331 |
| MS.gene32182.t1 | AT1G03550 | 65.665 | 233 | 70 | 1 | 89 | 321 | 2 | 224 | 3.09e-109 | 317 |
| MS.gene32182.t1 | AT1G03550 | 60.385 | 260 | 76 | 2 | 3 | 262 | 2 | 234 | 2.13e-108 | 316 |
| MS.gene32182.t1 | AT1G03550 | 62.551 | 243 | 64 | 2 | 3 | 245 | 2 | 217 | 9.30e-104 | 303 |
| MS.gene32182.t1 | AT1G03550 | 65.909 | 220 | 65 | 1 | 102 | 321 | 15 | 224 | 4.85e-102 | 299 |
| MS.gene32182.t1 | AT1G03550 | 61.991 | 221 | 57 | 2 | 3 | 223 | 2 | 195 | 7.61e-96 | 282 |
Find 72 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGCATTTACTACATATT+TGG | 0.085998 | 4.4:-22977614 | MS.gene32182:CDS |
| ACAGAAAGTGCTTTGAAATT+TGG | 0.141807 | 4.4:-22976931 | MS.gene32182:CDS |
| GCAATGTCGTGATGGATAAT+TGG | 0.196761 | 4.4:+22977673 | None:intergenic |
| GCCATTATCTACTTCATATC+AGG | 0.219332 | 4.4:-22977145 | MS.gene32182:CDS |
| CCTGCTGATTATAATAATTA+TGG | 0.242414 | 4.4:-22978859 | MS.gene32182:CDS |
| GATAAGCATTTGGGTTATTC+AGG | 0.247223 | 4.4:-22976236 | MS.gene32182:intron |
| TGTTACTGCCGCTTGGATTA+AGG | 0.263486 | 4.4:-22977450 | MS.gene32182:CDS |
| GATTATAATAATTATGGCTT+TGG | 0.323050 | 4.4:-22978853 | MS.gene32182:CDS |
| TGGAAACGTTGATAAGCATT+TGG | 0.329849 | 4.4:-22976246 | MS.gene32182:CDS |
| TTGGCAGGTGGAACACTTCC+AGG | 0.333344 | 4.4:+22978913 | None:intergenic |
| ATAGACAACTCTACTTTGAT+TGG | 0.339286 | 4.4:-22976469 | MS.gene32182:CDS |
| TCTTCTCAAATCAGCTTCCT+TGG | 0.342585 | 4.4:+22978637 | None:intergenic |
| CGACATTGCTAATGAAATTC+CGG | 0.348677 | 4.4:-22977659 | MS.gene32182:CDS |
| CACCACCACTGTAGTTTGAT+TGG | 0.353619 | 4.4:+22979731 | None:intergenic |
| GTTGCATTTACTACATATTT+GGG | 0.367478 | 4.4:-22977613 | MS.gene32182:intron |
| GTTACTGCCGCTTGGATTAA+GGG | 0.381019 | 4.4:-22977449 | MS.gene32182:CDS |
| AAAGAAGAACTTACAGAAAA+GGG | 0.387916 | 4.4:+22980821 | None:intergenic |
| TCAAATCAGCTTCCTTGGAT+TGG | 0.397438 | 4.4:+22978642 | None:intergenic |
| CAGCTATAACATTCCACAAT+AGG | 0.403682 | 4.4:+22977471 | None:intergenic |
| CAATGTCGTGATGGATAATT+GGG | 0.404575 | 4.4:+22977674 | None:intergenic |
| TAGACAACTCTACTTTGATT+GGG | 0.415020 | 4.4:-22976468 | MS.gene32182:CDS |
| GGAAACGTTGATAAGCATTT+GGG | 0.415274 | 4.4:-22976245 | MS.gene32182:CDS |
| AAAAGAAGAACTTACAGAAA+AGG | 0.421381 | 4.4:+22980820 | None:intergenic |
| AAATGCTTATCAACGTTTCC+AGG | 0.442725 | 4.4:+22976248 | None:intergenic |
| TTAACTTCTTCTTCATCAAA+GGG | 0.448107 | 4.4:+22980845 | None:intergenic |
| TACTTCATATCAGGGGTACC+TGG | 0.455209 | 4.4:-22977136 | MS.gene32182:CDS |
| CCCTGATATGAAGTAGATAA+TGG | 0.455504 | 4.4:+22977144 | None:intergenic |
| GTTAACTTCTTCTTCATCAA+AGG | 0.471618 | 4.4:+22980844 | None:intergenic |
| TTATAGCTGTTACTGCCGCT+TGG | 0.474085 | 4.4:-22977457 | MS.gene32182:CDS |
| GTAAGGCTGCTGAGATGAAA+CGG | 0.481306 | 4.4:-22976069 | MS.gene32182:CDS |
| TTGTTCTTGAGGAAAAGAAT+TGG | 0.481456 | 4.4:-22977708 | MS.gene32182:CDS |
| TTATTATAATCAGCAGGCTC+TGG | 0.486525 | 4.4:+22978865 | None:intergenic |
| TGATTTGAGAAGAAGGGAAC+AGG | 0.488053 | 4.4:-22978627 | MS.gene32182:intron |
| AGGAAGCTGATTTGAGAAGA+AGG | 0.491892 | 4.4:-22978634 | MS.gene32182:CDS |
| CTAACAGGAACCAGCTGCAA+GGG | 0.502793 | 4.4:-22979767 | MS.gene32182:intron |
| AGATGAAACGGGACGTTGCA+AGG | 0.512415 | 4.4:-22976057 | MS.gene32182:CDS |
| TACATGTACTTCCGCGGAAG+TGG | 0.512831 | 4.4:-22976091 | MS.gene32182:CDS |
| GACTAGTGGCGTGCCTATTG+TGG | 0.513746 | 4.4:-22977484 | MS.gene32182:CDS |
| GTACTTCCGCGGAAGTGGTA+AGG | 0.515999 | 4.4:-22976086 | MS.gene32182:CDS |
| CCATTATCTACTTCATATCA+GGG | 0.537386 | 4.4:-22977144 | MS.gene32182:CDS |
| AAAGTGCTTTGAAATTTGGA+TGG | 0.542574 | 4.4:-22976927 | MS.gene32182:CDS |
| CCATAATTATTATAATCAGC+AGG | 0.544102 | 4.4:+22978859 | None:intergenic |
| GGAAGCTGATTTGAGAAGAA+GGG | 0.546544 | 4.4:-22978633 | MS.gene32182:CDS |
| TGCAGCTGGAATTGTTCTTG+AGG | 0.551923 | 4.4:-22977719 | MS.gene32182:intron |
| ATCGTCACAGATCTCATGGC+TGG | 0.555595 | 4.4:-22980884 | None:intergenic |
| TAAGGCTGCTGAGATGAAAC+GGG | 0.555749 | 4.4:-22976068 | MS.gene32182:CDS |
| TTTCCTTTGAAAACTATAGG+AGG | 0.556106 | 4.4:+22976731 | None:intergenic |
| TCAGCAGGCTCTGGCTCAAG+AGG | 0.572777 | 4.4:+22978874 | None:intergenic |
| TACCACAGAACATATGCTCC+AGG | 0.578297 | 4.4:+22977118 | None:intergenic |
| TTTCATTAGCAATGTCGTGA+TGG | 0.578986 | 4.4:+22977665 | None:intergenic |
| GATGAAACGGGACGTTGCAA+GGG | 0.579861 | 4.4:-22976056 | MS.gene32182:CDS |
| GCTGTATCATGCAGGACTAG+TGG | 0.591145 | 4.4:-22977498 | MS.gene32182:intron |
| TTCTGCTTACAGGTTCACAT+AGG | 0.596304 | 4.4:-22976779 | MS.gene32182:intron |
| GGAGAAGGAACTCCAATCCA+AGG | 0.597039 | 4.4:-22978654 | MS.gene32182:CDS |
| GCCGCTTGGATTAAGGGTGA+AGG | 0.598277 | 4.4:-22977443 | MS.gene32182:intron |
| TACCTGGAGCATATGTTCTG+TGG | 0.610432 | 4.4:-22977120 | MS.gene32182:CDS |
| AGAGTTGTCTATCACATCGA+TGG | 0.612681 | 4.4:+22976480 | None:intergenic |
| ACTAACAGGAACCAGCTGCA+AGG | 0.617019 | 4.4:-22979768 | MS.gene32182:intron |
| AGACAACTCTACTTTGATTG+GGG | 0.620543 | 4.4:-22976467 | MS.gene32182:intron |
| CATACCGTTGATGTATCAAG+AGG | 0.630477 | 4.4:+22978814 | None:intergenic |
| ACCTTCACCCTTAATCCAAG+CGG | 0.633392 | 4.4:+22977442 | None:intergenic |
| AAGAAGAACTTACAGAAAAG+GGG | 0.636378 | 4.4:+22980822 | None:intergenic |
| AGCCAATCAAACTACAGTGG+TGG | 0.647558 | 4.4:-22979733 | MS.gene32182:CDS |
| AAAGAAGAAGCTGCTGCACG+AGG | 0.652474 | 4.4:-22978072 | MS.gene32182:intron |
| ATGAAACGGGACGTTGCAAG+GGG | 0.655213 | 4.4:-22976055 | MS.gene32182:CDS |
| TAACAGGAACCAGCTGCAAG+GGG | 0.655833 | 4.4:-22979766 | MS.gene32182:intron |
| TAACTTCTTCTTCATCAAAG+GGG | 0.656707 | 4.4:+22980846 | None:intergenic |
| CAGCAGCCTTACCACTTCCG+CGG | 0.662593 | 4.4:+22976080 | None:intergenic |
| CAAGTATACATGTACTTCCG+CGG | 0.676518 | 4.4:-22976097 | MS.gene32182:CDS |
| TATACCTCTTGATACATCAA+CGG | 0.679523 | 4.4:-22978818 | MS.gene32182:intron |
| CATTATCTACTTCATATCAG+GGG | 0.696824 | 4.4:-22977143 | MS.gene32182:CDS |
| TCAAGCCAATCAAACTACAG+TGG | 0.718625 | 4.4:-22979736 | MS.gene32182:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGAAAAATTTGTAAATTT+TGG | - | chr4.4:22980294-22980313 | MS.gene32182:intron | 10.0% |
| !!! | ATTTTTATTATTTTCATATG+GGG | - | chr4.4:22977652-22977671 | MS.gene32182:CDS | 10.0% |
| !!! | GAATTTTTATTATTTTCATA+TGG | - | chr4.4:22977650-22977669 | MS.gene32182:CDS | 10.0% |
| !! | AAAAAGATTTGCAAAATAAT+AGG | + | chr4.4:22977510-22977529 | None:intergenic | 15.0% |
| !! | TAAACAATTGAATTTGAAAA+GGG | + | chr4.4:22978915-22978934 | None:intergenic | 15.0% |
| !! | TATCATATCTTACAAAAAAA+TGG | + | chr4.4:22977879-22977898 | None:intergenic | 15.0% |
| !! | TCATTTATATAATCTAATGT+TGG | - | chr4.4:22980361-22980380 | MS.gene32182:intron | 15.0% |
| !! | TGAACATAAATAATTATAAC+CGG | + | chr4.4:22977231-22977250 | None:intergenic | 15.0% |
| !!! | ATCTTGATTTTATTCTTTAA+AGG | - | chr4.4:22976151-22976170 | MS.gene32182:intron | 15.0% |
| !!! | ATTATTTTGCAAATCTTTTT+AGG | - | chr4.4:22977510-22977529 | MS.gene32182:intron | 15.0% |
| !!! | CAATTTGAAATTAAAATAGA+GGG | + | chr4.4:22976546-22976565 | None:intergenic | 15.0% |
| !!! | TCAATTTGAAATTAAAATAG+AGG | + | chr4.4:22976547-22976566 | None:intergenic | 15.0% |
| !!! | TCTTGATTTTATTCTTTAAA+GGG | - | chr4.4:22976152-22976171 | MS.gene32182:intron | 15.0% |
| !!! | TTATTTTCCATTTCAATATT+AGG | - | chr4.4:22978212-22978231 | MS.gene32182:intron | 15.0% |
| !!! | TTGTTTTAGTTGTTAAATTT+TGG | - | chr4.4:22976202-22976221 | MS.gene32182:intron | 15.0% |
| !!! | TTTATATAATTTCTGAAGTT+TGG | - | chr4.4:22978555-22978574 | MS.gene32182:intron | 15.0% |
| !! | ATAAGATCAAAATGATTTAC+AGG | + | chr4.4:22977933-22977952 | None:intergenic | 20.0% |
| !! | ATAATTCATTACAAAGTAGT+GGG | + | chr4.4:22977813-22977832 | None:intergenic | 20.0% |
| !! | ATATTAGGATTTGAAAAAGA+AGG | - | chr4.4:22978227-22978246 | MS.gene32182:intron | 20.0% |
| !! | GAATGATTTAGTAGTTTATT+TGG | - | chr4.4:22978885-22978904 | MS.gene32182:CDS | 20.0% |
| !! | GATTATAATAATTATGGCTT+TGG | - | chr4.4:22978049-22978068 | MS.gene32182:intron | 20.0% |
| !! | GTAAACAATTGAATTTGAAA+AGG | + | chr4.4:22978916-22978935 | None:intergenic | 20.0% |
| !! | TATAATTCATTACAAAGTAG+TGG | + | chr4.4:22977814-22977833 | None:intergenic | 20.0% |
| !! | TATGGCTTAAGTTATATAAA+AGG | + | chr4.4:22979915-22979934 | None:intergenic | 20.0% |
| !! | TTATTTATTTATCCAAATGC+AGG | - | chr4.4:22978796-22978815 | MS.gene32182:intron | 20.0% |
| !! | TTCAAATCCTAATATTGAAA+TGG | + | chr4.4:22978222-22978241 | None:intergenic | 20.0% |
| !! | TTCTGAACAAATATAAATAC+AGG | + | chr4.4:22978868-22978887 | None:intergenic | 20.0% |
| !!! | AAAGTTTTGATTTTTTGAAC+TGG | - | chr4.4:22976109-22976128 | MS.gene32182:CDS | 20.0% |
| !!! | AAGTATCTATTTTTAGTTGT+TGG | - | chr4.4:22976296-22976315 | MS.gene32182:intron | 20.0% |
| !!! | AAGTTTTGATTTTTTGAACT+GGG | - | chr4.4:22976110-22976129 | MS.gene32182:CDS | 20.0% |
| !!! | ATATAAAAGGAGGTTTTTTT+TGG | - | chr4.4:22979493-22979512 | MS.gene32182:intron | 20.0% |
| !!! | ATATGATCTATTTGAAGTTA+GGG | - | chr4.4:22977008-22977027 | MS.gene32182:intron | 20.0% |
| !!! | GTTTTAATGTTGTTTTGTTT+TGG | - | chr4.4:22976350-22976369 | MS.gene32182:intron | 20.0% |
| !!! | TACTATGTTTTCCTTAATTT+TGG | - | chr4.4:22977106-22977125 | MS.gene32182:CDS | 20.0% |
| !!! | TGATTAAGGATTTTAAAACT+CGG | - | chr4.4:22977043-22977062 | MS.gene32182:intron | 20.0% |
| !!! | TTTGCACTATATTTTGATTT+TGG | - | chr4.4:22976519-22976538 | MS.gene32182:intron | 20.0% |
| ! | AAAAGAAGAACTTACAGAAA+AGG | + | chr4.4:22976085-22976104 | None:intergenic | 25.0% |
| ! | AAAGAAGAACTTACAGAAAA+GGG | + | chr4.4:22976084-22976103 | None:intergenic | 25.0% |
| ! | AACAATTCAGAAGTTTACTT+TGG | + | chr4.4:22980579-22980598 | None:intergenic | 25.0% |
| ! | AATAACCATTGAAACATTTG+TGG | - | chr4.4:22977713-22977732 | MS.gene32182:CDS | 25.0% |
| ! | AATAATGATGCATAAAGAAG+AGG | - | chr4.4:22977441-22977460 | MS.gene32182:intron | 25.0% |
| ! | AATTGTTTCAATCCGAAATT+AGG | - | chr4.4:22978597-22978616 | MS.gene32182:intron | 25.0% |
| ! | ACAAATGTTTCAATGGTTAT+TGG | + | chr4.4:22977714-22977733 | None:intergenic | 25.0% |
| ! | CCATAATTATTATAATCAGC+AGG | + | chr4.4:22978046-22978065 | None:intergenic | 25.0% |
| ! | CTAGATACTAGTAATTAACA+GGG | + | chr4.4:22978755-22978774 | None:intergenic | 25.0% |
| ! | CTTTATTAGAATTTGGATTG+GGG | + | chr4.4:22976929-22976948 | None:intergenic | 25.0% |
| ! | GAGTTTAGATATATAAAAGG+AGG | - | chr4.4:22979483-22979502 | MS.gene32182:intron | 25.0% |
| ! | GGTATAAGAGTTTATGATTA+AGG | - | chr4.4:22977029-22977048 | MS.gene32182:intron | 25.0% |
| ! | GGTGAGTTTAGATATATAAA+AGG | - | chr4.4:22979480-22979499 | MS.gene32182:intron | 25.0% |
| ! | GTTGCATTTACTACATATTT+GGG | - | chr4.4:22979289-22979308 | MS.gene32182:intron | 25.0% |
| ! | TACCTAAAAACACGATATAA+TGG | + | chr4.4:22979814-22979833 | None:intergenic | 25.0% |
| ! | TATTTCAACAGCTATTTGAT+AGG | + | chr4.4:22976748-22976767 | None:intergenic | 25.0% |
| ! | TCTAGATACTAGTAATTAAC+AGG | + | chr4.4:22978756-22978775 | None:intergenic | 25.0% |
| ! | TGAATGAGCTTAAAGATAAA+CGG | + | chr4.4:22980716-22980735 | None:intergenic | 25.0% |
| ! | TGAGTTTATTAATCAAACAC+CGG | - | chr4.4:22977209-22977228 | MS.gene32182:intron | 25.0% |
| ! | TGTTGCATTTACTACATATT+TGG | - | chr4.4:22979288-22979307 | MS.gene32182:intron | 25.0% |
| ! | TTAACTTCTTCTTCATCAAA+GGG | + | chr4.4:22976060-22976079 | None:intergenic | 25.0% |
| ! | TTCTGCTTAATTCTTCTAAT+AGG | - | chr4.4:22979144-22979163 | MS.gene32182:intron | 25.0% |
| ! | TTGACATAGGTGTAAAAATT+TGG | - | chr4.4:22979728-22979747 | MS.gene32182:CDS | 25.0% |
| ! | TTGTGTAACTATAACTGTAT+TGG | - | chr4.4:22976488-22976507 | MS.gene32182:CDS | 25.0% |
| ! | TTTATGCATGTAAACATGAA+TGG | - | chr4.4:22977345-22977364 | MS.gene32182:intron | 25.0% |
| ! | TTTGTGGAGTAAAATTATTG+AGG | - | chr4.4:22977729-22977748 | MS.gene32182:intron | 25.0% |
| !! | AAAAGGTGTATATAAATGGA+AGG | - | chr4.4:22976863-22976882 | MS.gene32182:intron | 25.0% |
| !! | ATTTTCTACTTCATTGGATT+TGG | - | chr4.4:22980622-22980641 | MS.gene32182:intron | 25.0% |
| !! | CATATTTAGAATCAAGAGTA+TGG | + | chr4.4:22979933-22979952 | None:intergenic | 25.0% |
| !! | CCTGCTGATTATAATAATTA+TGG | - | chr4.4:22978043-22978062 | MS.gene32182:intron | 25.0% |
| !! | CTTGAAAAGGTGTATATAAA+TGG | - | chr4.4:22976859-22976878 | MS.gene32182:intron | 25.0% |
| !! | GATATGATCTATTTGAAGTT+AGG | - | chr4.4:22977007-22977026 | MS.gene32182:intron | 25.0% |
| !! | GCTTTATTAGAATTTGGATT+GGG | + | chr4.4:22976930-22976949 | None:intergenic | 25.0% |
| !! | GTTAGTTTAGACCAAAATTA+AGG | + | chr4.4:22977120-22977139 | None:intergenic | 25.0% |
| !! | TTGTAGATTTTCTACTTCAT+TGG | - | chr4.4:22980616-22980635 | MS.gene32182:intron | 25.0% |
| !! | TTTTTACAATCTGAACTCTA+AGG | - | chr4.4:22977836-22977855 | MS.gene32182:intron | 25.0% |
| !!! | AGCTTTATTAGAATTTGGAT+TGG | + | chr4.4:22976931-22976950 | None:intergenic | 25.0% |
| !!! | GATTTTCCTTTGAAAACTAT+AGG | + | chr4.4:22980177-22980196 | None:intergenic | 25.0% |
| !!! | GCATTAGCTTTATTAGAATT+TGG | + | chr4.4:22976936-22976955 | None:intergenic | 25.0% |
| !!! | TAATTTTGGTCTAAACTAAC+AGG | - | chr4.4:22977120-22977139 | MS.gene32182:CDS | 25.0% |
| !!! | TATTTTTTAGAATTCAGCTC+AGG | - | chr4.4:22976455-22976474 | MS.gene32182:intron | 25.0% |
| !!! | TTTTTAAAATGTCAGAATCC+TGG | - | chr4.4:22977971-22977990 | MS.gene32182:intron | 25.0% |
| AACAGAAATATGGATATGGA+AGG | + | chr4.4:22978427-22978446 | None:intergenic | 30.0% | |
| AACATAGTAAATAAGTCAGC+AGG | + | chr4.4:22977095-22977114 | None:intergenic | 30.0% | |
| AAGAAGAACTTACAGAAAAG+GGG | + | chr4.4:22976083-22976102 | None:intergenic | 30.0% | |
| AAGACAGCATGATTTAATGA+GGG | + | chr4.4:22978660-22978679 | None:intergenic | 30.0% | |
| AAGTCACAAGTAACAACAAT+AGG | - | chr4.4:22977274-22977293 | MS.gene32182:intron | 30.0% | |
| AAGTTTATAAACCCTTATGC+AGG | + | chr4.4:22978728-22978747 | None:intergenic | 30.0% | |
| ACAGAAATATGGATATGGAA+GGG | + | chr4.4:22978426-22978445 | None:intergenic | 30.0% | |
| ACATAGTAAATAAGTCAGCA+GGG | + | chr4.4:22977094-22977113 | None:intergenic | 30.0% | |
| ACATGAATGAATGCATGAAT+AGG | + | chr4.4:22978514-22978533 | None:intergenic | 30.0% | |
| ACTAGTATCTAGAAATTCAC+AGG | - | chr4.4:22978763-22978782 | MS.gene32182:intron | 30.0% | |
| AGACCTTAATAAAATTCTGC+AGG | + | chr4.4:22978996-22979015 | None:intergenic | 30.0% | |
| AGACTTCTCAAACAGAAATA+TGG | + | chr4.4:22978437-22978456 | None:intergenic | 30.0% | |
| AGATTTACTCCTGAAATAAG+TGG | - | chr4.4:22978486-22978505 | MS.gene32182:intron | 30.0% | |
| ATAGACAACTCTACTTTGAT+TGG | - | chr4.4:22980433-22980452 | MS.gene32182:intron | 30.0% | |
| ATTATGAAACTGCAACAAGT+TGG | - | chr4.4:22979885-22979904 | MS.gene32182:intron | 30.0% | |
| CAAGTAACAACAATAGGTTA+TGG | - | chr4.4:22977280-22977299 | MS.gene32182:intron | 30.0% | |
| CAGAACTAAATTTGTACAGA+AGG | + | chr4.4:22979129-22979148 | None:intergenic | 30.0% | |
| CATGCCATAACAAACAAAAA+GGG | + | chr4.4:22976599-22976618 | None:intergenic | 30.0% | |
| CATTATAAGTCGGATTTGTA+GGG | - | chr4.4:22976893-22976912 | MS.gene32182:intron | 30.0% | |
| CATTATCTACTTCATATCAG+GGG | - | chr4.4:22979759-22979778 | MS.gene32182:CDS | 30.0% | |
| CCATTATCTACTTCATATCA+GGG | - | chr4.4:22979758-22979777 | MS.gene32182:CDS | 30.0% | |
| CTAAAGTTAAATTGTATCGC+TGG | + | chr4.4:22977775-22977794 | None:intergenic | 30.0% | |
| CTCAAACAGAAATATGGATA+TGG | + | chr4.4:22978431-22978450 | None:intergenic | 30.0% | |
| CTCTAATGCGATCTAAATTT+GGG | + | chr4.4:22976725-22976744 | None:intergenic | 30.0% | |
| GAAATGAGAAATGAAAACAG+AGG | + | chr4.4:22978395-22978414 | None:intergenic | 30.0% | |
| GTTAACTTCTTCTTCATCAA+AGG | + | chr4.4:22976061-22976080 | None:intergenic | 30.0% | |
| TAACTTCTTCTTCATCAAAG+GGG | + | chr4.4:22976059-22976078 | None:intergenic | 30.0% | |
| TAGACAACTCTACTTTGATT+GGG | - | chr4.4:22980434-22980453 | MS.gene32182:intron | 30.0% | |
| TATACCTCTTGATACATCAA+CGG | - | chr4.4:22978084-22978103 | MS.gene32182:CDS | 30.0% | |
| TATGCATTGTAAGAAAACCA+TGG | + | chr4.4:22980754-22980773 | None:intergenic | 30.0% | |
| TCATGCCATAACAAACAAAA+AGG | + | chr4.4:22976600-22976619 | None:intergenic | 30.0% | |
| TCATTATAAGTCGGATTTGT+AGG | - | chr4.4:22976892-22976911 | MS.gene32182:intron | 30.0% | |
| TCTTGTTAAACGTAGTATGA+TGG | + | chr4.4:22978469-22978488 | None:intergenic | 30.0% | |
| TGTTTATTCACACTGATACA+GGG | - | chr4.4:22980387-22980406 | MS.gene32182:intron | 30.0% | |
| TTACTCCACAAATGTTTCAA+TGG | + | chr4.4:22977721-22977740 | None:intergenic | 30.0% | |
| TTATGAAACTGCAACAAGTT+GGG | - | chr4.4:22979886-22979905 | MS.gene32182:intron | 30.0% | |
| TTGGTCACATTTGCAATATT+TGG | + | chr4.4:22980560-22980579 | None:intergenic | 30.0% | |
| TTGTTCTTGAGGAAAAGAAT+TGG | - | chr4.4:22979194-22979213 | MS.gene32182:intron | 30.0% | |
| ! | AGGTGTAAAAATTTGGTTTC+TGG | - | chr4.4:22979735-22979754 | MS.gene32182:CDS | 30.0% |
| ! | ATGATACAGCTTTTAATCAG+TGG | + | chr4.4:22979394-22979413 | None:intergenic | 30.0% |
| ! | ATGGTTTTTCATGCTTTATC+TGG | - | chr4.4:22979994-22980013 | MS.gene32182:intron | 30.0% |
| ! | CATAACTTGTGCACATTAAT+TGG | + | chr4.4:22980063-22980082 | None:intergenic | 30.0% |
| ! | GTAGTGGGATTTATAAAAAC+TGG | + | chr4.4:22977798-22977817 | None:intergenic | 30.0% |
| ! | GTCCATTATATCGTGTTTTT+AGG | - | chr4.4:22979809-22979828 | MS.gene32182:intron | 30.0% |
| ! | GTGTCTTTTTGTTCACTTTA+CGG | - | chr4.4:22978314-22978333 | MS.gene32182:intron | 30.0% |
| ! | TACATTGCTATTACTGTTTG+AGG | - | chr4.4:22978933-22978952 | MS.gene32182:intron | 30.0% |
| ! | TATTTGGAATAAGATCGTGT+AGG | + | chr4.4:22980544-22980563 | None:intergenic | 30.0% |
| ! | TGATGGATAATTGGGAAAAA+TGG | + | chr4.4:22979223-22979242 | None:intergenic | 30.0% |
| ! | TGTTTCTGTTGACATTCAAT+TGG | - | chr4.4:22978969-22978988 | MS.gene32182:intron | 30.0% |
| ! | TTTCCTTTGAAAACTATAGG+AGG | + | chr4.4:22980174-22980193 | None:intergenic | 30.0% |
| !! | AAAGTGCTTTGAAATTTGGA+TGG | - | chr4.4:22979975-22979994 | MS.gene32182:intron | 30.0% |
| !! | AATGCCCTTTTTGTTTGTTA+TGG | - | chr4.4:22976592-22976611 | MS.gene32182:intron | 30.0% |
| !! | ACAGAAAGTGCTTTGAAATT+TGG | - | chr4.4:22979971-22979990 | MS.gene32182:intron | 30.0% |
| !! | TGCAATTTTTGAAGATGAAC+CGG | + | chr4.4:22979265-22979284 | None:intergenic | 30.0% |
| !! | TTTCTGTATTGATGATGATG+TGG | - | chr4.4:22976568-22976587 | MS.gene32182:intron | 30.0% |
| !!! | CTTTTTCGACTTCATTTTTG+TGG | - | chr4.4:22980248-22980267 | MS.gene32182:intron | 30.0% |
| !!! | GTTGTTAAATTTTGGTTGAC+TGG | - | chr4.4:22976210-22976229 | MS.gene32182:intron | 30.0% |
| !!! | TTAAATTTTGGTTGACTGGT+TGG | - | chr4.4:22976214-22976233 | MS.gene32182:intron | 30.0% |
| !!! | TTGACATTTTATTTTGCAGC+TGG | - | chr4.4:22979169-22979188 | MS.gene32182:intron | 30.0% |
| AAATGCTTATCAACGTTTCC+AGG | + | chr4.4:22980657-22980676 | None:intergenic | 35.0% | |
| AAGGTGATAGATGTGACATT+AGG | + | chr4.4:22976667-22976686 | None:intergenic | 35.0% | |
| AATGCGATCTAAATTTGGGT+TGG | + | chr4.4:22976721-22976740 | None:intergenic | 35.0% | |
| ACACAATACTCAAGAACCAA+TGG | + | chr4.4:22979352-22979371 | None:intergenic | 35.0% | |
| ACATCTATCACCTTACTAGT+CGG | - | chr4.4:22976673-22976692 | MS.gene32182:intron | 35.0% | |
| AGAAATATGGATATGGAAGG+GGG | + | chr4.4:22978424-22978443 | None:intergenic | 35.0% | |
| AGACAACTCTACTTTGATTG+GGG | - | chr4.4:22980435-22980454 | MS.gene32182:intron | 35.0% | |
| AGACAGCATGATTTAATGAG+GGG | + | chr4.4:22978659-22978678 | None:intergenic | 35.0% | |
| AGGCATCTCTCATTATAAGT+CGG | - | chr4.4:22976883-22976902 | MS.gene32182:intron | 35.0% | |
| AGTTAAATTGTATCGCTGGA+TGG | + | chr4.4:22977771-22977790 | None:intergenic | 35.0% | |
| AGTTAACTTTGCCTGCATAA+GGG | - | chr4.4:22978714-22978733 | MS.gene32182:intron | 35.0% | |
| AGTTAGTGCTAAAGATTAGG+AGG | - | chr4.4:22977313-22977332 | MS.gene32182:intron | 35.0% | |
| ATCTCAGTAAATATCCACTG+AGG | + | chr4.4:22978350-22978369 | None:intergenic | 35.0% | |
| ATTGAGTGCTTAGAGTAAGT+TGG | + | chr4.4:22980211-22980230 | None:intergenic | 35.0% | |
| CAGAAATATGGATATGGAAG+GGG | + | chr4.4:22978425-22978444 | None:intergenic | 35.0% | |
| CAGCTATAACATTCCACAAT+AGG | + | chr4.4:22979434-22979453 | None:intergenic | 35.0% | |
| CAGTGGATATTTACTGAGAT+TGG | - | chr4.4:22978350-22978369 | MS.gene32182:intron | 35.0% | |
| CAGTTAGCATTTAAAAGCCA+TGG | - | chr4.4:22980734-22980753 | MS.gene32182:intron | 35.0% | |
| CCCTGATATGAAGTAGATAA+TGG | + | chr4.4:22979761-22979780 | None:intergenic | 35.0% | |
| CGACATTGCTAATGAAATTC+CGG | - | chr4.4:22979243-22979262 | MS.gene32182:intron | 35.0% | |
| CTGTTTATTCACACTGATAC+AGG | - | chr4.4:22980386-22980405 | MS.gene32182:intron | 35.0% | |
| GAAGACAGCATGATTTAATG+AGG | + | chr4.4:22978661-22978680 | None:intergenic | 35.0% | |
| GAATAGGATCCACTTATTTC+AGG | + | chr4.4:22978498-22978517 | None:intergenic | 35.0% | |
| GATTAAAAGCTGTATCATGC+AGG | - | chr4.4:22979396-22979415 | MS.gene32182:intron | 35.0% | |
| GCCATTATCTACTTCATATC+AGG | - | chr4.4:22979757-22979776 | MS.gene32182:CDS | 35.0% | |
| GCTCTAATGCGATCTAAATT+TGG | + | chr4.4:22976726-22976745 | None:intergenic | 35.0% | |
| GGATTTGAAAAAGAAGGAGA+AGG | - | chr4.4:22978233-22978252 | MS.gene32182:intron | 35.0% | |
| GTAATCCTCTTCATTGTTCT+TGG | - | chr4.4:22979315-22979334 | MS.gene32182:intron | 35.0% | |
| GTCTCACATTAGATGTGATA+CGG | - | chr4.4:22976836-22976855 | MS.gene32182:intron | 35.0% | |
| GTCTCTTTGATTCTTTGTGT+AGG | - | chr4.4:22976318-22976337 | MS.gene32182:intron | 35.0% | |
| GTTTATTCACACTGATACAG+GGG | - | chr4.4:22980388-22980407 | MS.gene32182:intron | 35.0% | |
| TCAAGAACCAATGGCATAAT+TGG | + | chr4.4:22979343-22979362 | None:intergenic | 35.0% | |
| TCCAGAGATCAACCTAATTT+CGG | + | chr4.4:22978612-22978631 | None:intergenic | 35.0% | |
| TCTCAGTAAATATCCACTGA+GGG | + | chr4.4:22978349-22978368 | None:intergenic | 35.0% | |
| TGACATGAGTGGTTCAATAA+TGG | + | chr4.4:22976772-22976791 | None:intergenic | 35.0% | |
| TGGAGTTAGTGCTAAAGATT+AGG | - | chr4.4:22977310-22977329 | MS.gene32182:intron | 35.0% | |
| TGGATAATTGGGAAAAATGG+TGG | + | chr4.4:22979220-22979239 | None:intergenic | 35.0% | |
| TTATTATAATCAGCAGGCTC+TGG | + | chr4.4:22978040-22978059 | None:intergenic | 35.0% | |
| TTTCATTAGCAATGTCGTGA+TGG | + | chr4.4:22979240-22979259 | None:intergenic | 35.0% | |
| TTTCTGTCCTGCAATGAAAA+AGG | + | chr4.4:22979958-22979977 | None:intergenic | 35.0% | |
| ! | AGGTGAAAGCCTTGAATTTT+TGG | + | chr4.4:22978011-22978030 | None:intergenic | 35.0% |
| ! | ATTGCTATTACTGTTTGAGG+TGG | - | chr4.4:22978936-22978955 | MS.gene32182:intron | 35.0% |
| ! | GATAAGCATTTGGGTTATTC+AGG | - | chr4.4:22980666-22980685 | MS.gene32182:intron | 35.0% |
| ! | GGAAACGTTGATAAGCATTT+GGG | - | chr4.4:22980657-22980676 | MS.gene32182:intron | 35.0% |
| ! | GGTCCTGCAGAATTTTATTA+AGG | - | chr4.4:22978990-22979009 | MS.gene32182:intron | 35.0% |
| ! | TGGAAACGTTGATAAGCATT+TGG | - | chr4.4:22980656-22980675 | MS.gene32182:intron | 35.0% |
| ! | TTGTTTCTTCTTCTGCTTAC+AGG | - | chr4.4:22980113-22980132 | MS.gene32182:intron | 35.0% |
| !! | AACATGGCTTTGTTTGACAT+AGG | - | chr4.4:22979715-22979734 | MS.gene32182:intron | 35.0% |
| !! | ATATGCTCCTTTTTCATTGC+AGG | - | chr4.4:22979948-22979967 | MS.gene32182:intron | 35.0% |
| !! | CAATGTCGTGATGGATAATT+GGG | + | chr4.4:22979231-22979250 | None:intergenic | 35.0% |
| !! | GCTTTTCTGTGATGCTTTTT+AGG | - | chr4.4:22977610-22977629 | MS.gene32182:intron | 35.0% |
| !! | GTGTGAGTCATTTTATATCG+CGG | - | chr4.4:22979368-22979387 | MS.gene32182:intron | 35.0% |
| !!! | ATAGCTGCTCACTTTTTCTT+TGG | - | chr4.4:22980771-22980790 | MS.gene32182:intron | 35.0% |
| AAGAAGGGAACAGGTATACA+TGG | - | chr4.4:22978284-22978303 | MS.gene32182:intron | 40.0% | |
| AAGCCTGAGCTGAATTCTAA+AGG | + | chr4.4:22976381-22976400 | None:intergenic | 40.0% | |
| ACCAATTGAGCTATGCTCAT+GGG | - | chr4.4:22979618-22979637 | MS.gene32182:intron | 40.0% | |
| ACCTCATAAGGCGAATAAGT+GGG | - | chr4.4:22979546-22979565 | MS.gene32182:intron | 40.0% | |
| AGAAACAAAAAGAGCCAAGC+AGG | + | chr4.4:22979050-22979069 | None:intergenic | 40.0% | |
| AGAAGGGAACAGGTATACAT+GGG | - | chr4.4:22978285-22978304 | MS.gene32182:intron | 40.0% | |
| AGAGTTGTCTATCACATCGA+TGG | + | chr4.4:22980425-22980444 | None:intergenic | 40.0% | |
| AGATGTGATACGGCTTGAAA+AGG | - | chr4.4:22976846-22976865 | MS.gene32182:intron | 40.0% | |
| ATGAGCATAGCTCAATTGGT+AGG | + | chr4.4:22979618-22979637 | None:intergenic | 40.0% | |
| ATGCTCATGGGGACTATAAA+AGG | - | chr4.4:22979630-22979649 | MS.gene32182:intron | 40.0% | |
| CAAGTATACATGTACTTCCG+CGG | - | chr4.4:22980805-22980824 | MS.gene32182:intron | 40.0% | |
| CAGTTAACTTTGCCTGCATA+AGG | - | chr4.4:22978713-22978732 | MS.gene32182:intron | 40.0% | |
| CATACCGTTGATGTATCAAG+AGG | + | chr4.4:22978091-22978110 | None:intergenic | 40.0% | |
| CTTGGTTCCAATTATGCCAT+TGG | - | chr4.4:22979333-22979352 | MS.gene32182:intron | 40.0% | |
| GGCTAGAAATTCACCTCATA+AGG | - | chr4.4:22979534-22979553 | MS.gene32182:intron | 40.0% | |
| TACCAATTGAGCTATGCTCA+TGG | - | chr4.4:22979617-22979636 | MS.gene32182:intron | 40.0% | |
| TCAAATCAGCTTCCTTGGAT+TGG | + | chr4.4:22978263-22978282 | None:intergenic | 40.0% | |
| TCAAGCCAATCAAACTACAG+TGG | - | chr4.4:22977166-22977185 | MS.gene32182:CDS | 40.0% | |
| TCTTCTCAAATCAGCTTCCT+TGG | + | chr4.4:22978268-22978287 | None:intergenic | 40.0% | |
| TGAGCATAGCTCAATTGGTA+GGG | + | chr4.4:22979617-22979636 | None:intergenic | 40.0% | |
| TGATTTGAGAAGAAGGGAAC+AGG | - | chr4.4:22978275-22978294 | MS.gene32182:intron | 40.0% | |
| TGCATGTGATATGCAAGAGT+CGG | + | chr4.4:22979590-22979609 | None:intergenic | 40.0% | |
| TGGAACCAAGAACAATGAAG+AGG | + | chr4.4:22979323-22979342 | None:intergenic | 40.0% | |
| TTCCACCTGCCAAAAATTCA+AGG | - | chr4.4:22977999-22978018 | MS.gene32182:intron | 40.0% | |
| TTCTGCTTACAGGTTCACAT+AGG | - | chr4.4:22980123-22980142 | MS.gene32182:intron | 40.0% | |
| TTCTTGCAAGAATCGAACTG+AGG | - | chr4.4:22978179-22978198 | MS.gene32182:intron | 40.0% | |
| ! | AGAATTCAGCTCAGGCTTTT+AGG | - | chr4.4:22976383-22976402 | MS.gene32182:intron | 40.0% |
| ! | ATTTGGATTGGGGCTATCTT+AGG | + | chr4.4:22976919-22976938 | None:intergenic | 40.0% |
| ! | GAATTCAGCTCAGGCTTTTT+AGG | - | chr4.4:22976384-22976403 | MS.gene32182:intron | 40.0% |
| ! | GCTCCTCCTATAGTTTTCAA+AGG | - | chr4.4:22980168-22980187 | MS.gene32182:intron | 40.0% |
| ! | GTACTATGGTTGATGTGGTT+GGG | - | chr4.4:22976236-22976255 | MS.gene32182:intron | 40.0% |
| ! | TACTATGGTTGATGTGGTTG+GGG | - | chr4.4:22976237-22976256 | MS.gene32182:CDS | 40.0% |
| ! | TGAGCTGAATTCTAAAGGCA+AGG | + | chr4.4:22976376-22976395 | None:intergenic | 40.0% |
| ! | TGGATTTGGATTTTTCTGCC+TGG | - | chr4.4:22980636-22980655 | MS.gene32182:intron | 40.0% |
| !! | AGGAAGCTGATTTGAGAAGA+AGG | - | chr4.4:22978268-22978287 | MS.gene32182:intron | 40.0% |
| !! | CAATCTGAACTCTAAGGTCT+AGG | - | chr4.4:22977842-22977861 | MS.gene32182:intron | 40.0% |
| !! | GCAATGTCGTGATGGATAAT+TGG | + | chr4.4:22979232-22979251 | None:intergenic | 40.0% |
| !! | GGAAGCTGATTTGAGAAGAA+GGG | - | chr4.4:22978269-22978288 | MS.gene32182:intron | 40.0% |
| !! | TCCGAAATTAGGTTGATCTC+TGG | - | chr4.4:22978608-22978627 | MS.gene32182:intron | 40.0% |
| !! | TTGCCTTTAGAATTCAGCTC+AGG | - | chr4.4:22976375-22976394 | MS.gene32182:intron | 40.0% |
| !!! | GAAAGCCTTGAATTTTTGGC+AGG | + | chr4.4:22978007-22978026 | None:intergenic | 40.0% |
| AAAGCCATGTTTCATGCGCA+TGG | + | chr4.4:22979706-22979725 | None:intergenic | 45.0% | |
| AATGCCATGCGCATGAAACA+TGG | - | chr4.4:22979699-22979718 | MS.gene32182:intron | 45.0% | |
| ACCTTCACCCTTAATCCAAG+CGG | + | chr4.4:22979463-22979482 | None:intergenic | 45.0% | |
| AGCCAATCAAACTACAGTGG+TGG | - | chr4.4:22977169-22977188 | MS.gene32182:intron | 45.0% | |
| CAATAGGTTATGGTCAGCAG+TGG | - | chr4.4:22977290-22977309 | MS.gene32182:intron | 45.0% | |
| CACCACCACTGTAGTTTGAT+TGG | + | chr4.4:22977174-22977193 | None:intergenic | 45.0% | |
| CACCTCATAAGGCGAATAAG+TGG | - | chr4.4:22979545-22979564 | MS.gene32182:intron | 45.0% | |
| CATGTGATATGCAAGAGTCG+GGG | + | chr4.4:22979588-22979607 | None:intergenic | 45.0% | |
| CCAATTGAGCTATGCTCATG+GGG | - | chr4.4:22979619-22979638 | MS.gene32182:intron | 45.0% | |
| CCTCATAAGGCGAATAAGTG+GGG | - | chr4.4:22979547-22979566 | MS.gene32182:intron | 45.0% | |
| GCATGTGATATGCAAGAGTC+GGG | + | chr4.4:22979589-22979608 | None:intergenic | 45.0% | |
| GTAAGGCTGCTGAGATGAAA+CGG | - | chr4.4:22980833-22980852 | MS.gene32182:intron | 45.0% | |
| TAAGGCTGCTGAGATGAAAC+GGG | - | chr4.4:22980834-22980853 | MS.gene32182:intron | 45.0% | |
| TACCACAGAACATATGCTCC+AGG | + | chr4.4:22979787-22979806 | None:intergenic | 45.0% | |
| TACCTGGAGCATATGTTCTG+TGG | - | chr4.4:22979782-22979801 | MS.gene32182:intron | 45.0% | |
| TGCAGCTGGAATTGTTCTTG+AGG | - | chr4.4:22979183-22979202 | MS.gene32182:intron | 45.0% | |
| TGTTTCATGCGCATGGCATT+AGG | + | chr4.4:22979699-22979718 | None:intergenic | 45.0% | |
| TTATAGCTGTTACTGCCGCT+TGG | - | chr4.4:22979445-22979464 | MS.gene32182:intron | 45.0% | |
| TTCGTCTCACTTCCTGCATT+TGG | + | chr4.4:22978811-22978830 | None:intergenic | 45.0% | |
| ! | ACGCTCTAGATATCCAATCC+TGG | - | chr4.4:22976791-22976810 | MS.gene32182:intron | 45.0% |
| ! | CGCACTAATTTTGTCCTGCT+TGG | - | chr4.4:22979033-22979052 | MS.gene32182:intron | 45.0% |
| ! | CGCTCTAGATATCCAATCCT+GGG | - | chr4.4:22976792-22976811 | MS.gene32182:intron | 45.0% |
| ! | GCATTTGGGTTATTCAGGTC+TGG | - | chr4.4:22980671-22980690 | MS.gene32182:intron | 45.0% |
| ! | GGTACTATGGTTGATGTGGT+TGG | - | chr4.4:22976235-22976254 | MS.gene32182:intron | 45.0% |
| ! | GGTTGGTACTATGGTTGATG+TGG | - | chr4.4:22976231-22976250 | MS.gene32182:intron | 45.0% |
| ! | GTTACTGCCGCTTGGATTAA+GGG | - | chr4.4:22979453-22979472 | MS.gene32182:intron | 45.0% |
| ! | TATCTAGAGCGTGACATGAG+TGG | + | chr4.4:22976783-22976802 | None:intergenic | 45.0% |
| ! | TGGTTGACTGGTTGGTACTA+TGG | - | chr4.4:22976222-22976241 | MS.gene32182:intron | 45.0% |
| ! | TGTTACTGCCGCTTGGATTA+AGG | - | chr4.4:22979452-22979471 | MS.gene32182:intron | 45.0% |
| !! | AAAACAGAGGAGAGCATCAG+AGG | + | chr4.4:22978382-22978401 | None:intergenic | 45.0% |
| !! | TACTTCATATCAGGGGTACC+TGG | - | chr4.4:22979766-22979785 | MS.gene32182:intron | 45.0% |
| !! | TGAATTTCTAGCCACTACGC+AGG | + | chr4.4:22979527-22979546 | None:intergenic | 45.0% |
| !!! | AGCCTTGAATTTTTGGCAGG+TGG | + | chr4.4:22978004-22978023 | None:intergenic | 45.0% |
| !!! | CTGCTCACTTTTTCTTTGGC+TGG | - | chr4.4:22980775-22980794 | MS.gene32182:intron | 45.0% |
| !!! | GTTGGGGAAACTGGTTTTTG+AGG | - | chr4.4:22976253-22976272 | MS.gene32182:CDS | 45.0% |
| !!! | AATTTTTATTATTTTCATAT+GGG | - | chr4.4:22977651-22977670 | MS.gene32182:CDS | 5.0% |
| AAAGAAGAAGCTGCTGCACG+AGG | - | chr4.4:22978830-22978849 | MS.gene32182:CDS | 50.0% | |
| ACTAACAGGAACCAGCTGCA+AGG | - | chr4.4:22977134-22977153 | MS.gene32182:CDS | 50.0% | |
| AGATGAAACGGGACGTTGCA+AGG | - | chr4.4:22980845-22980864 | MS.gene32182:CDS | 50.0% | |
| AGGCGAATAAGTGGGGAGTT+TGG | - | chr4.4:22979554-22979573 | MS.gene32182:intron | 50.0% | |
| ATGAAACGGGACGTTGCAAG+GGG | - | chr4.4:22980847-22980866 | MS.gene32182:CDS | 50.0% | |
| CCCCACTTATTCGCCTTATG+AGG | + | chr4.4:22979550-22979569 | None:intergenic | 50.0% | |
| CCCCATGAGCATAGCTCAAT+TGG | + | chr4.4:22979622-22979641 | None:intergenic | 50.0% | |
| CTAACAGGAACCAGCTGCAA+GGG | - | chr4.4:22977135-22977154 | MS.gene32182:CDS | 50.0% | |
| GATATCCAATCCTGGGTGTG+AGG | - | chr4.4:22976799-22976818 | MS.gene32182:intron | 50.0% | |
| GATGAAACGGGACGTTGCAA+GGG | - | chr4.4:22980846-22980865 | MS.gene32182:CDS | 50.0% | |
| GCGAATAAGTGGGGAGTTTG+GGG | - | chr4.4:22979556-22979575 | MS.gene32182:intron | 50.0% | |
| GCTGTATCATGCAGGACTAG+TGG | - | chr4.4:22979404-22979423 | MS.gene32182:intron | 50.0% | |
| GGAGAAGGAACTCCAATCCA+AGG | - | chr4.4:22978248-22978267 | MS.gene32182:intron | 50.0% | |
| GGCGAATAAGTGGGGAGTTT+GGG | - | chr4.4:22979555-22979574 | MS.gene32182:intron | 50.0% | |
| GTTGATGTGGTTGGGGAAAC+TGG | - | chr4.4:22976244-22976263 | MS.gene32182:CDS | 50.0% | |
| TAACAGGAACCAGCTGCAAG+GGG | - | chr4.4:22977136-22977155 | MS.gene32182:CDS | 50.0% | |
| TACATGTACTTCCGCGGAAG+TGG | - | chr4.4:22980811-22980830 | MS.gene32182:intron | 50.0% | |
| ! | AGAGTAAGTTGGCGTACGTC+AGG | + | chr4.4:22980200-22980219 | None:intergenic | 50.0% |
| ! | CTCCACAACACCGACTAGTA+AGG | + | chr4.4:22976686-22976705 | None:intergenic | 50.0% |
| ! | GAGTAAGTTGGCGTACGTCA+GGG | + | chr4.4:22980199-22980218 | None:intergenic | 50.0% |
| ! | GATGTTTTTCCCCTTGCAGC+TGG | + | chr4.4:22977148-22977167 | None:intergenic | 50.0% |
| !! | CACCTTACTAGTCGGTGTTG+TGG | - | chr4.4:22976681-22976700 | MS.gene32182:intron | 50.0% |
| !! | CTTACTAGTCGGTGTTGTGG+AGG | - | chr4.4:22976684-22976703 | MS.gene32182:intron | 50.0% |
| AACACACACTCCTCACACCC+AGG | + | chr4.4:22976812-22976831 | None:intergenic | 55.0% | |
| ACACTCCTCACACCCAGGAT+TGG | + | chr4.4:22976807-22976826 | None:intergenic | 55.0% | |
| ACGGTTGAGAGTTCCCTCAG+TGG | - | chr4.4:22978333-22978352 | MS.gene32182:intron | 55.0% | |
| GACTAGTGGCGTGCCTATTG+TGG | - | chr4.4:22979418-22979437 | MS.gene32182:intron | 55.0% | |
| GCCGCTTGGATTAAGGGTGA+AGG | - | chr4.4:22979459-22979478 | MS.gene32182:intron | 55.0% | |
| GTACTTCCGCGGAAGTGGTA+AGG | - | chr4.4:22980816-22980835 | MS.gene32182:intron | 55.0% | |
| TTGGCAGGTGGAACACTTCC+AGG | + | chr4.4:22977992-22978011 | None:intergenic | 55.0% | |
| !! | TGGACTAGTAGCCTGCGTAG+TGG | - | chr4.4:22979513-22979532 | MS.gene32182:intron | 55.0% |
| CAGCAGCCTTACCACTTCCG+CGG | + | chr4.4:22980825-22980844 | None:intergenic | 60.0% | |
| ! | TCAGCAGGCTCTGGCTCAAG+AGG | + | chr4.4:22978031-22978050 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 22976033 | 22980891 | 22976033 | ID=MS.gene32182 |
| chr4.4 | mRNA | 22976033 | 22980891 | 22976033 | ID=MS.gene32182.t1;Parent=MS.gene32182 |
| chr4.4 | exon | 22980835 | 22980891 | 22980835 | ID=MS.gene32182.t1.exon1;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22980835 | 22980891 | 22980835 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22979717 | 22979782 | 22979717 | ID=MS.gene32182.t1.exon2;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22979717 | 22979782 | 22979717 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22978819 | 22978938 | 22978819 | ID=MS.gene32182.t1.exon3;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22978819 | 22978938 | 22978819 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22978628 | 22978690 | 22978628 | ID=MS.gene32182.t1.exon4;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22978628 | 22978690 | 22978628 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22978073 | 22978106 | 22978073 | ID=MS.gene32182.t1.exon5;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22978073 | 22978106 | 22978073 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22977614 | 22977736 | 22977614 | ID=MS.gene32182.t1.exon6;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22977614 | 22977736 | 22977614 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22977444 | 22977506 | 22977444 | ID=MS.gene32182.t1.exon7;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22977444 | 22977506 | 22977444 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22977094 | 22977187 | 22977094 | ID=MS.gene32182.t1.exon8;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22977094 | 22977187 | 22977094 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22976909 | 22976954 | 22976909 | ID=MS.gene32182.t1.exon9;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22976909 | 22976954 | 22976909 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22976722 | 22976789 | 22976722 | ID=MS.gene32182.t1.exon10;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22976722 | 22976789 | 22976722 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22976468 | 22976516 | 22976468 | ID=MS.gene32182.t1.exon11;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22976468 | 22976516 | 22976468 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22976237 | 22976302 | 22976237 | ID=MS.gene32182.t1.exon12;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22976237 | 22976302 | 22976237 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| chr4.4 | exon | 22976033 | 22976149 | 22976033 | ID=MS.gene32182.t1.exon13;Parent=MS.gene32182.t1 |
| chr4.4 | CDS | 22976033 | 22976149 | 22976033 | ID=cds.MS.gene32182.t1;Parent=MS.gene32182.t1 |
| Gene Sequence |
| Protein sequence |
