Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37925.t1 | XP_024633550.1 | 93.6 | 482 | 30 | 1 | 1 | 481 | 1 | 482 | 1.40E-192 | 682.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37925.t1 | F4K0J3 | 42.1 | 216 | 123 | 1 | 24 | 237 | 584 | 799 | 6.7e-31 | 136.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37925.t1 | A0A396IXC3 | 93.8 | 482 | 29 | 1 | 1 | 481 | 1 | 482 | 9.8e-193 | 682.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene37925 | 0.805858 | 1.09E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene37925 | 0.851462 | 8.74E-61 | -1.69E-46 |
| MS.gene050297 | MS.gene37925 | 0.839815 | 1.26E-57 | -1.69E-46 |
| MS.gene05124 | MS.gene37925 | 0.834451 | 2.98E-56 | -1.69E-46 |
| MS.gene051629 | MS.gene37925 | 0.809941 | 1.48E-50 | -1.69E-46 |
| MS.gene051742 | MS.gene37925 | 0.808718 | 2.70E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene37925 | 0.83712 | 6.27E-57 | -1.69E-46 |
| MS.gene051914 | MS.gene37925 | 0.83451 | 2.88E-56 | -1.69E-46 |
| MS.gene051955 | MS.gene37925 | 0.887877 | 9.70E-73 | -1.69E-46 |
| MS.gene052143 | MS.gene37925 | 0.848661 | 5.32E-60 | -1.69E-46 |
| MS.gene052308 | MS.gene37925 | 0.879087 | 1.66E-69 | -1.69E-46 |
| MS.gene052367 | MS.gene37925 | 0.881196 | 2.93E-70 | -1.69E-46 |
| MS.gene053173 | MS.gene37925 | 0.862159 | 6.17E-64 | -1.69E-46 |
| MS.gene053348 | MS.gene37925 | 0.86383 | 1.88E-64 | -1.69E-46 |
| MS.gene053416 | MS.gene37925 | 0.851166 | 1.06E-60 | -1.69E-46 |
| MS.gene053417 | MS.gene37925 | 0.851079 | 1.12E-60 | -1.69E-46 |
| MS.gene054551 | MS.gene37925 | 0.869512 | 2.93E-66 | -1.69E-46 |
| MS.gene054552 | MS.gene37925 | 0.825184 | 5.38E-54 | -1.69E-46 |
| MS.gene054593 | MS.gene37925 | 0.872657 | 2.69E-67 | -1.69E-46 |
| MS.gene054633 | MS.gene37925 | 0.845808 | 3.22E-59 | -1.69E-46 |
| MS.gene054662 | MS.gene37925 | 0.811755 | 5.97E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene37925 | 0.827842 | 1.25E-54 | -1.69E-46 |
| MS.gene055308 | MS.gene37925 | 0.88745 | 1.41E-72 | -1.69E-46 |
| MS.gene055411 | MS.gene37925 | 0.829145 | 6.06E-55 | -1.69E-46 |
| MS.gene055578 | MS.gene37925 | 0.888674 | 4.79E-73 | -1.69E-46 |
| MS.gene055579 | MS.gene37925 | 0.842843 | 2.02E-58 | -1.69E-46 |
| MS.gene055957 | MS.gene37925 | 0.873594 | 1.30E-67 | -1.69E-46 |
| MS.gene056041 | MS.gene37925 | 0.917757 | 3.60E-86 | -1.69E-46 |
| MS.gene056042 | MS.gene37925 | 0.864304 | 1.34E-64 | -1.69E-46 |
| MS.gene05640 | MS.gene37925 | 0.889424 | 2.45E-73 | -1.69E-46 |
| MS.gene056526 | MS.gene37925 | 0.850656 | 1.47E-60 | -1.69E-46 |
| MS.gene056528 | MS.gene37925 | 0.856771 | 2.57E-62 | -1.69E-46 |
| MS.gene05652 | MS.gene37925 | 0.812765 | 3.60E-51 | -1.69E-46 |
| MS.gene057358 | MS.gene37925 | 0.807451 | 5.02E-50 | -1.69E-46 |
| MS.gene057359 | MS.gene37925 | 0.808061 | 3.73E-50 | -1.69E-46 |
| MS.gene057458 | MS.gene37925 | 0.864014 | 1.65E-64 | -1.69E-46 |
| MS.gene058013 | MS.gene37925 | 0.807235 | 5.58E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene37925 | 0.881772 | 1.82E-70 | -1.69E-46 |
| MS.gene058196 | MS.gene37925 | 0.818268 | 2.14E-52 | -1.69E-46 |
| MS.gene058198 | MS.gene37925 | 0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene058818 | MS.gene37925 | 0.807798 | 4.24E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene37925 | 0.830812 | 2.38E-55 | -1.69E-46 |
| MS.gene058828 | MS.gene37925 | 0.81315 | 2.96E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene37925 | 0.882612 | 9.00E-71 | -1.69E-46 |
| MS.gene059300 | MS.gene37925 | 0.812363 | 4.40E-51 | -1.69E-46 |
| MS.gene059553 | MS.gene37925 | 0.873624 | 1.27E-67 | -1.69E-46 |
| MS.gene059616 | MS.gene37925 | 0.818603 | 1.80E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene37925 | 0.890762 | 7.34E-74 | -1.69E-46 |
| MS.gene060565 | MS.gene37925 | 0.873896 | 1.03E-67 | -1.69E-46 |
| MS.gene06057 | MS.gene37925 | 0.817343 | 3.46E-52 | -1.69E-46 |
| MS.gene060825 | MS.gene37925 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene06093 | MS.gene37925 | 0.878536 | 2.59E-69 | -1.69E-46 |
| MS.gene061099 | MS.gene37925 | 0.902566 | 8.50E-79 | -1.69E-46 |
| MS.gene061260 | MS.gene37925 | 0.880611 | 4.76E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37925.t1 | MTR_3g100230 | 95.763 | 472 | 19 | 1 | 1 | 471 | 1 | 472 | 0.0 | 852 |
| MS.gene37925.t1 | MTR_3g100230 | 82.014 | 278 | 50 | 0 | 204 | 481 | 461 | 738 | 9.37e-149 | 442 |
| MS.gene37925.t1 | MTR_3g100270 | 54.661 | 236 | 102 | 2 | 24 | 254 | 568 | 803 | 9.23e-62 | 218 |
| MS.gene37925.t1 | MTR_5g066320 | 54.936 | 233 | 93 | 3 | 24 | 251 | 584 | 809 | 2.21e-58 | 208 |
| MS.gene37925.t1 | MTR_5g066320 | 42.520 | 127 | 62 | 6 | 352 | 478 | 1050 | 1165 | 5.62e-11 | 65.9 |
| MS.gene37925.t1 | MTR_3g102170 | 45.726 | 234 | 116 | 2 | 24 | 246 | 523 | 756 | 4.63e-41 | 157 |
| MS.gene37925.t1 | MTR_1g018940 | 43.830 | 235 | 121 | 3 | 24 | 247 | 523 | 757 | 3.26e-40 | 155 |
| MS.gene37925.t1 | MTR_4g094882 | 42.060 | 233 | 124 | 3 | 26 | 247 | 535 | 767 | 2.48e-34 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37925.t1 | AT5G33300 | 35.062 | 482 | 248 | 14 | 2 | 466 | 3 | 436 | 1.51e-59 | 202 |
| MS.gene37925.t1 | AT5G60930 | 49.356 | 233 | 113 | 2 | 24 | 251 | 584 | 816 | 3.71e-54 | 196 |
| MS.gene37925.t1 | AT5G60930 | 42.105 | 133 | 65 | 4 | 359 | 479 | 1072 | 1204 | 5.28e-20 | 94.4 |
| MS.gene37925.t1 | AT5G60930 | 49.356 | 233 | 113 | 2 | 24 | 251 | 584 | 816 | 5.18e-54 | 196 |
| MS.gene37925.t1 | AT5G60930 | 46.535 | 101 | 42 | 4 | 359 | 447 | 1072 | 1172 | 1.30e-15 | 80.5 |
| MS.gene37925.t1 | AT5G60930 | 49.356 | 233 | 113 | 2 | 24 | 251 | 584 | 816 | 5.72e-54 | 196 |
| MS.gene37925.t1 | AT5G60930 | 42.105 | 133 | 65 | 4 | 359 | 479 | 1072 | 1204 | 4.53e-20 | 94.4 |
| MS.gene37925.t1 | AT5G47820 | 42.553 | 235 | 122 | 5 | 24 | 247 | 537 | 769 | 4.87e-37 | 145 |
| MS.gene37925.t1 | AT5G47820 | 42.553 | 235 | 122 | 5 | 24 | 247 | 537 | 769 | 4.87e-37 | 145 |
| MS.gene37925.t1 | AT3G50240 | 38.075 | 239 | 137 | 3 | 24 | 251 | 535 | 773 | 9.80e-32 | 130 |
| MS.gene37925.t1 | AT3G50240 | 38.075 | 239 | 137 | 3 | 24 | 251 | 540 | 778 | 9.99e-32 | 129 |
| MS.gene37925.t1 | AT3G50240 | 38.075 | 239 | 137 | 3 | 24 | 251 | 540 | 778 | 1.00e-31 | 129 |
| MS.gene37925.t1 | AT3G50240 | 38.866 | 247 | 124 | 6 | 24 | 251 | 438 | 676 | 1.21e-31 | 129 |
Find 81 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGATATTCAAGATTTAA+AGG | 0.253115 | 3.3:-83170832 | MS.gene37925:CDS |
| CATTCTGAATTCTCTGATTT+CGG | 0.286686 | 3.3:+83170312 | None:intergenic |
| ACTTGAAAAGGAAGTTCTTC+AGG | 0.301419 | 3.3:-83173183 | MS.gene37925:intron |
| TTCTAACCAGACGCTTAAAA+TGG | 0.305140 | 3.3:-83172912 | MS.gene37925:intron |
| TCAGTTGAACCGCTCATTCC+GGG | 0.325438 | 3.3:+83170519 | None:intergenic |
| TTCAGTTGAACCGCTCATTC+CGG | 0.336799 | 3.3:+83170518 | None:intergenic |
| TGCCAGTCGCAGAGACAATC+AGG | 0.345557 | 3.3:-83170214 | MS.gene37925:CDS |
| AAGCTGAATTACCGGCTTCC+TGG | 0.352374 | 3.3:+83169936 | None:intergenic |
| ACGAGAGAACAAAGCGTATC+AGG | 0.355852 | 3.3:-83174206 | MS.gene37925:intron |
| CCGAACCTGCTTCATTTCTC+TGG | 0.361082 | 3.3:+83170746 | None:intergenic |
| TGAAGAATACCAGTGAGTTC+TGG | 0.378241 | 3.3:+83170163 | None:intergenic |
| TTGGTAACAAGCTGAATTAC+CGG | 0.378752 | 3.3:+83169928 | None:intergenic |
| AATCCTTCTCGGGGCTGTTA+AGG | 0.386658 | 3.3:+83170856 | None:intergenic |
| CAGGTTCTAAGTGCACAAAT+AGG | 0.393864 | 3.3:-83170368 | MS.gene37925:CDS |
| AAGTAACGGCAAGAATAAAC+TGG | 0.410910 | 3.3:-83170547 | MS.gene37925:CDS |
| ATGCAAGGCTTTACTTGAAA+AGG | 0.413670 | 3.3:-83173195 | MS.gene37925:CDS |
| AATATCATCAAAATCCTTCT+CGG | 0.414339 | 3.3:+83170845 | None:intergenic |
| GCTATATTAAATCGTTCATC+TGG | 0.416606 | 3.3:-83172699 | MS.gene37925:intron |
| TTTCCTATGAGTTGAAAATT+GGG | 0.418572 | 3.3:+83173428 | None:intergenic |
| GGGAAGAAGGAATGAAATAA+AGG | 0.424569 | 3.3:-83172951 | MS.gene37925:CDS |
| GATTCTTCGGCTTCTAATGA+TGG | 0.434654 | 3.3:-83173624 | MS.gene37925:CDS |
| AAGTGCACTCTCTAGTAGTT+TGG | 0.440255 | 3.3:+83170248 | None:intergenic |
| AAGAAGAAGTTGAGATGCAC+AGG | 0.441019 | 3.3:-83171033 | MS.gene37925:CDS |
| ACAAAAGGGGAATGATTCTT+CGG | 0.444354 | 3.3:-83173637 | MS.gene37925:CDS |
| ATATCATCAAAATCCTTCTC+GGG | 0.445394 | 3.3:+83170846 | None:intergenic |
| CTTCAGAAAGAAGAAGATCC+AGG | 0.449570 | 3.3:+83170571 | None:intergenic |
| TCTAAATAATCAGCTTAAGA+AGG | 0.449925 | 3.3:-83172975 | MS.gene37925:intron |
| CCCCTGATTGTCTCTGCGAC+TGG | 0.449995 | 3.3:+83170212 | None:intergenic |
| TACTTCAAGGTCTCAGTCAC+AGG | 0.455785 | 3.3:-83170886 | MS.gene37925:intron |
| TGATTGTCTCTGCGACTGGC+AGG | 0.456224 | 3.3:+83170216 | None:intergenic |
| AGTTGAGGACATTGGATCCT+TGG | 0.460985 | 3.3:+83169909 | None:intergenic |
| GCTGAACTTACTTGAAGATC+AGG | 0.469665 | 3.3:-83173568 | MS.gene37925:intron |
| TTCCACCGGTGGATCGGCAT+TGG | 0.470232 | 3.3:+83170415 | None:intergenic |
| AGGTTCTAAGTGCACAAATA+GGG | 0.475573 | 3.3:-83170367 | MS.gene37925:CDS |
| CACAGCTTCCACCGGTGGAT+CGG | 0.477769 | 3.3:+83170409 | None:intergenic |
| AGCTTAAGAAGGAGGGAAGA+AGG | 0.499424 | 3.3:-83172964 | MS.gene37925:CDS |
| GAACAAGTAAACAACCTTAG+TGG | 0.503189 | 3.3:-83170810 | MS.gene37925:CDS |
| GAGTTCTGGATGTCACATAA+TGG | 0.506154 | 3.3:+83170177 | None:intergenic |
| TCAGAGTTTGAAAGCTCAGA+AGG | 0.511020 | 3.3:-83173367 | MS.gene37925:intron |
| CTTCTTTCTGAAGAAAGTAA+CGG | 0.514124 | 3.3:-83170561 | MS.gene37925:CDS |
| ATTCTTTAAGTAGACCACTA+AGG | 0.514987 | 3.3:+83170796 | None:intergenic |
| GGACCATCATGTGGCTGCAC+AGG | 0.518820 | 3.3:-83170387 | MS.gene37925:CDS |
| GAATGCTCTACGAATAAAGA+TGG | 0.520005 | 3.3:-83170294 | MS.gene37925:CDS |
| TAGATGCTCAAAAGCTAGGC+CGG | 0.535709 | 3.3:-83169969 | MS.gene37925:CDS |
| AGAGAGAAAGAGCACGTGAA+GGG | 0.540189 | 3.3:-83170485 | MS.gene37925:CDS |
| TCGGAAGGTGATGCATCGAT+TGG | 0.540375 | 3.3:+83174274 | None:intergenic |
| AATTTGGTAGACTGAGATTG+AGG | 0.543775 | 3.3:-83173670 | MS.gene37925:intron |
| AATATAGATGCTCAAAAGCT+AGG | 0.549130 | 3.3:-83169973 | MS.gene37925:CDS |
| AGGTGATGCATCGATTGGAC+TGG | 0.555707 | 3.3:+83174279 | None:intergenic |
| TAAAGAATTGCAATTGCGGA+AGG | 0.556691 | 3.3:-83170781 | MS.gene37925:CDS |
| AAGTGCCAATGCCGATCCAC+CGG | 0.558646 | 3.3:-83170420 | MS.gene37925:CDS |
| AAATAATCAGCTTAAGAAGG+AGG | 0.573715 | 3.3:-83172972 | MS.gene37925:intron |
| AAGAATAAACTGGATATCCC+CGG | 0.582145 | 3.3:-83170537 | MS.gene37925:CDS |
| CTGGATATCCCCGGAATGAG+CGG | 0.584017 | 3.3:-83170528 | MS.gene37925:CDS |
| GCCAGTCGCAGAGACAATCA+GGG | 0.585574 | 3.3:-83170213 | MS.gene37925:CDS |
| TACTTAAAGAATTGCAATTG+CGG | 0.587536 | 3.3:-83170785 | MS.gene37925:CDS |
| GAACCTGTGCAGCCACATGA+TGG | 0.587999 | 3.3:+83170384 | None:intergenic |
| AATAATCAGCTTAAGAAGGA+GGG | 0.594152 | 3.3:-83172971 | MS.gene37925:intron |
| CGATCCACCGGTGGAAGCTG+TGG | 0.597535 | 3.3:-83170408 | MS.gene37925:CDS |
| AAGAGAGAAAGAGCACGTGA+AGG | 0.598384 | 3.3:-83170486 | MS.gene37925:CDS |
| TGATGGTCCACAGCTTCCAC+CGG | 0.600139 | 3.3:+83170401 | None:intergenic |
| AAAAGCAACATTACGAAGAG+AGG | 0.600323 | 3.3:-83174243 | MS.gene37925:CDS |
| TGGTCCACAGCTTCCACCGG+TGG | 0.602270 | 3.3:+83170404 | None:intergenic |
| TGCACAGGGAGGAAATATCA+AGG | 0.607053 | 3.3:-83171018 | MS.gene37925:intron |
| CAGTTGAACCGCTCATTCCG+GGG | 0.607341 | 3.3:+83170520 | None:intergenic |
| ATGTGACATCCAGAACTCAC+TGG | 0.607514 | 3.3:-83170172 | MS.gene37925:intron |
| TGTGCGATTCAGATTATGCA+AGG | 0.607564 | 3.3:-83173210 | MS.gene37925:CDS |
| AGACCTTAACAGCCCCGAGA+AGG | 0.608317 | 3.3:-83170859 | MS.gene37925:CDS |
| GGTAATTCAGCTTGTTACCA+AGG | 0.609156 | 3.3:-83169926 | MS.gene37925:CDS |
| TGATTCCAGAGAAATGAAGC+AGG | 0.614230 | 3.3:-83170751 | MS.gene37925:intron |
| TGCCAATGCCGATCCACCGG+TGG | 0.639265 | 3.3:-83170417 | MS.gene37925:CDS |
| GCACTTTGTAGTCTTGCACA+AGG | 0.652067 | 3.3:+83170437 | None:intergenic |
| GGAAGCTGTGGACCATCATG+TGG | 0.660549 | 3.3:-83170396 | MS.gene37925:CDS |
| TGCTCTACGAATAAAGATGG+AGG | 0.662555 | 3.3:-83170291 | MS.gene37925:CDS |
| TATCATCAAAATCCTTCTCG+GGG | 0.672288 | 3.3:+83170847 | None:intergenic |
| TAGGGAACCACTGAAATCAG+TGG | 0.673171 | 3.3:-83170349 | MS.gene37925:CDS |
| CCAGTCGCAGAGACAATCAG+GGG | 0.680822 | 3.3:-83170212 | MS.gene37925:CDS |
| AGAAGAAGTTGAGATGCACA+GGG | 0.686394 | 3.3:-83171032 | MS.gene37925:CDS |
| GGTATTGCAACGAAAGACTG+AGG | 0.702858 | 3.3:-83172772 | MS.gene37925:CDS |
| ACATAACTTGTGCAACTGAG+TGG | 0.718792 | 3.3:+83172107 | None:intergenic |
| AGAAGTTGAGATGCACAGGG+AGG | 0.719950 | 3.3:-83171029 | MS.gene37925:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAACAAGTAATTTATTA+TGG | - | chr3.3:83173535-83173554 | MS.gene37925:intron | 10.0% |
| !! | AAAAAAAACTAAAGAAGAAT+TGG | + | chr3.3:83170923-83170942 | None:intergenic | 15.0% |
| !! | AAAAGTAATATGAGTAAAAA+AGG | + | chr3.3:83171393-83171412 | None:intergenic | 15.0% |
| !! | AAATCGAATAATTTAATCTA+GGG | - | chr3.3:83170170-83170189 | MS.gene37925:intron | 15.0% |
| !! | TAAATTGAAGATAAATAAAG+TGG | + | chr3.3:83172665-83172684 | None:intergenic | 15.0% |
| !! | ATTATGCTACTGATATTATA+TGG | - | chr3.3:83171867-83171886 | MS.gene37925:intron | 20.0% |
| !! | ATTGAGAAAAATCTTACTAA+TGG | - | chr3.3:83171096-83171115 | MS.gene37925:intron | 20.0% |
| !! | CATTCAATATTATATACTCT+CGG | - | chr3.3:83172609-83172628 | MS.gene37925:intron | 20.0% |
| !! | GAAATCGAATAATTTAATCT+AGG | - | chr3.3:83170169-83170188 | MS.gene37925:intron | 20.0% |
| !! | GTTTATTTATGTTGAATTCA+AGG | + | chr3.3:83172830-83172849 | None:intergenic | 20.0% |
| !! | TAAGTATTAATTGTAGAAGA+GGG | - | chr3.3:83170494-83170513 | MS.gene37925:CDS | 20.0% |
| !! | TACTAATTAAGTCTTCAAAA+AGG | + | chr3.3:83171937-83171956 | None:intergenic | 20.0% |
| !! | TATCTTCAATTTAACAAGTT+GGG | - | chr3.3:83172672-83172691 | MS.gene37925:intron | 20.0% |
| !! | TGATGATATTCAAGATTTAA+AGG | - | chr3.3:83173375-83173394 | MS.gene37925:CDS | 20.0% |
| !! | TTAAGTATTAATTGTAGAAG+AGG | - | chr3.3:83170493-83170512 | MS.gene37925:CDS | 20.0% |
| !! | TTATCTTCAATTTAACAAGT+TGG | - | chr3.3:83172671-83172690 | MS.gene37925:intron | 20.0% |
| !! | TTTACTATACTGTAAAATCA+AGG | - | chr3.3:83174142-83174161 | MS.gene37925:intron | 20.0% |
| !!! | AAGCATTTTGAATTTTCTAA+AGG | - | chr3.3:83170371-83170390 | MS.gene37925:CDS | 20.0% |
| !!! | AAGTTTCTTAGATTTTGAAT+CGG | - | chr3.3:83170129-83170148 | MS.gene37925:intron | 20.0% |
| !!! | AGCATTTTGAATTTTCTAAA+GGG | - | chr3.3:83170372-83170391 | MS.gene37925:CDS | 20.0% |
| !!! | TAAAGAAGTACAAGTAAAAT+AGG | - | chr3.3:83173572-83173591 | MS.gene37925:CDS | 20.0% |
| !!! | TACTTGACCATTTTTATTTT+TGG | + | chr3.3:83171643-83171662 | None:intergenic | 20.0% |
| !!! | TGTTTATACATTTTGATGTT+AGG | + | chr3.3:83172042-83172061 | None:intergenic | 20.0% |
| !!! | TTCTAAAAAATGAAACTTAC+AGG | + | chr3.3:83172374-83172393 | None:intergenic | 20.0% |
| !!! | TTTTATTGTTTGAACTTCAA+AGG | - | chr3.3:83172511-83172530 | MS.gene37925:intron | 20.0% |
| ! | AATATCATCAAAATCCTTCT+CGG | + | chr3.3:83173365-83173384 | None:intergenic | 25.0% |
| ! | AGACTTAATTAGTAAGACAA+AGG | - | chr3.3:83171943-83171962 | MS.gene37925:intron | 25.0% |
| ! | AGGAAATGAATGAATTTAAC+AGG | + | chr3.3:83171591-83171610 | None:intergenic | 25.0% |
| ! | ATCTGAATTGAAGAAAAAAC+TGG | - | chr3.3:83170747-83170766 | MS.gene37925:intron | 25.0% |
| ! | CAAAATGTATAAACAATGAC+TGG | - | chr3.3:83172047-83172066 | MS.gene37925:intron | 25.0% |
| ! | CTACATTACTCAAATATTTG+AGG | - | chr3.3:83172697-83172716 | MS.gene37925:intron | 25.0% |
| ! | GAGAAAAAAAAAACACATGA+CGG | + | chr3.3:83170713-83170732 | None:intergenic | 25.0% |
| ! | GTAGGTTCCAAAAATAAAAA+TGG | - | chr3.3:83171633-83171652 | MS.gene37925:intron | 25.0% |
| ! | GTATCAGCATATTTATCTTA+TGG | - | chr3.3:83171200-83171219 | MS.gene37925:intron | 25.0% |
| ! | TAAAAATGGTCAAGTAATTC+AGG | - | chr3.3:83171647-83171666 | MS.gene37925:intron | 25.0% |
| ! | TACTTAAAGAATTGCAATTG+CGG | - | chr3.3:83173422-83173441 | MS.gene37925:CDS | 25.0% |
| ! | TATCTAGTATATATCCCTTT+GGG | - | chr3.3:83171174-83171193 | MS.gene37925:intron | 25.0% |
| ! | TCTAAATAATCAGCTTAAGA+AGG | - | chr3.3:83171232-83171251 | MS.gene37925:intron | 25.0% |
| ! | TCTGAATTGAAGAAAAAACT+GGG | - | chr3.3:83170748-83170767 | MS.gene37925:intron | 25.0% |
| ! | TTAATTGTAATGCATATCTC+TGG | - | chr3.3:83172253-83172272 | MS.gene37925:intron | 25.0% |
| ! | TTTGCGTAAAGTTTCATTAT+AGG | - | chr3.3:83170329-83170348 | MS.gene37925:CDS | 25.0% |
| !! | AATGCAAGAAAGAATTTTTC+TGG | + | chr3.3:83174093-83174112 | None:intergenic | 25.0% |
| !! | GATATTAGAGGATTGAATTT+TGG | - | chr3.3:83171073-83171092 | MS.gene37925:intron | 25.0% |
| !! | TGTAAACTGTATATTTTGCA+TGG | - | chr3.3:83172315-83172334 | MS.gene37925:intron | 25.0% |
| !! | TTTCCTATGAGTTGAAAATT+GGG | + | chr3.3:83170782-83170801 | None:intergenic | 25.0% |
| !!! | CTTACATGAATGTACTTTTT+TGG | - | chr3.3:83170871-83170890 | MS.gene37925:CDS | 25.0% |
| !!! | TAGCACCTATTTTAATAACT+TGG | - | chr3.3:83174113-83174132 | MS.gene37925:intron | 25.0% |
| !!! | TCTCATTTTTTTCTTACATC+AGG | - | chr3.3:83171414-83171433 | MS.gene37925:intron | 25.0% |
| !!! | TCTCTTACTTTTGATATTAG+AGG | - | chr3.3:83171061-83171080 | MS.gene37925:CDS | 25.0% |
| !!! | TTTATTGGTGTTGTGTAATT+TGG | - | chr3.3:83170521-83170540 | MS.gene37925:CDS | 25.0% |
| !!! | TTTTCCTATGAGTTGAAAAT+TGG | + | chr3.3:83170783-83170802 | None:intergenic | 25.0% |
| AAAGGCTGGAAATAAGTATT+AGG | + | chr3.3:83172187-83172206 | None:intergenic | 30.0% | |
| AAAGGGAATGACTTGATTTA+GGG | - | chr3.3:83170389-83170408 | MS.gene37925:CDS | 30.0% | |
| AAATAATCAGCTTAAGAAGG+AGG | - | chr3.3:83171235-83171254 | MS.gene37925:intron | 30.0% | |
| AATAAAATAACCACTTCCAC+TGG | + | chr3.3:83172498-83172517 | None:intergenic | 30.0% | |
| AATAATCAGCTTAAGAAGGA+GGG | - | chr3.3:83171236-83171255 | MS.gene37925:intron | 30.0% | |
| AATATAGATGCTCAAAAGCT+AGG | - | chr3.3:83174234-83174253 | MS.gene37925:CDS | 30.0% | |
| AGACCTTGAAGTAACAAAAA+AGG | + | chr3.3:83173314-83173333 | None:intergenic | 30.0% | |
| AGGAGTTGAAAAAACAAAAG+GGG | - | chr3.3:83170557-83170576 | MS.gene37925:CDS | 30.0% | |
| ATATCATCAAAATCCTTCTC+GGG | + | chr3.3:83173364-83173383 | None:intergenic | 30.0% | |
| ATCAACTTGTGTTTACGTAT+AGG | - | chr3.3:83170943-83170962 | MS.gene37925:intron | 30.0% | |
| ATCACTCTAATTTGATGTTG+TGG | - | chr3.3:83173280-83173299 | MS.gene37925:intron | 30.0% | |
| ATCAGTAGCATAATCATGAT+TGG | + | chr3.3:83171861-83171880 | None:intergenic | 30.0% | |
| ATGATTCTATGACCAATGTT+CGG | + | chr3.3:83171793-83171812 | None:intergenic | 30.0% | |
| ATTCTTTAAGTAGACCACTA+AGG | + | chr3.3:83173414-83173433 | None:intergenic | 30.0% | |
| ATTGGACACATTCTCAAATA+CGG | + | chr3.3:83171843-83171862 | None:intergenic | 30.0% | |
| CAAATTAGAGTGATCTACTA+TGG | + | chr3.3:83173274-83173293 | None:intergenic | 30.0% | |
| CACTTCTAATTTGATGTCAA+TGG | + | chr3.3:83173488-83173507 | None:intergenic | 30.0% | |
| CTCAGCCAAGTTATTAAAAT+AGG | + | chr3.3:83174121-83174140 | None:intergenic | 30.0% | |
| CTTAAACTACTGATGTAGTA+TGG | + | chr3.3:83172891-83172910 | None:intergenic | 30.0% | |
| GACCTTGAAGTAACAAAAAA+GGG | + | chr3.3:83173313-83173332 | None:intergenic | 30.0% | |
| GAGGAGTTGAAAAAACAAAA+GGG | - | chr3.3:83170556-83170575 | MS.gene37925:CDS | 30.0% | |
| GCTATATTAAATCGTTCATC+TGG | - | chr3.3:83171508-83171527 | MS.gene37925:intron | 30.0% | |
| GCTGAAGTTTGTGTATATTT+CGG | - | chr3.3:83172573-83172592 | MS.gene37925:CDS | 30.0% | |
| GTATCTAGTATATATCCCTT+TGG | - | chr3.3:83171173-83171192 | MS.gene37925:intron | 30.0% | |
| TAAAGGGAATGACTTGATTT+AGG | - | chr3.3:83170388-83170407 | MS.gene37925:CDS | 30.0% | |
| TACTTATTTCCAGCCTTTAT+AGG | - | chr3.3:83172189-83172208 | MS.gene37925:intron | 30.0% | |
| TCATTTACTAGGACATGTTA+AGG | - | chr3.3:83171809-83171828 | MS.gene37925:intron | 30.0% | |
| TGAGGAGTTGAAAAAACAAA+AGG | - | chr3.3:83170555-83170574 | MS.gene37925:CDS | 30.0% | |
| TGGTCATAGAATCATTTACT+AGG | - | chr3.3:83171798-83171817 | MS.gene37925:intron | 30.0% | |
| TGTTGGAAATGTATATTGCA+TGG | - | chr3.3:83171973-83171992 | MS.gene37925:intron | 30.0% | |
| TTAAGTGCTCTCAGATTATA+GGG | + | chr3.3:83173020-83173039 | None:intergenic | 30.0% | |
| TTTAAGTGCTCTCAGATTAT+AGG | + | chr3.3:83173021-83173040 | None:intergenic | 30.0% | |
| TTTAGGCAACTGAATTTGAT+TGG | - | chr3.3:83172745-83172764 | MS.gene37925:CDS | 30.0% | |
| ! | AAGGTTTTGCTGGTAATTAT+TGG | + | chr3.3:83172811-83172830 | None:intergenic | 30.0% |
| ! | AATCCCAATTTTCAACTCAT+AGG | - | chr3.3:83170776-83170795 | MS.gene37925:CDS | 30.0% |
| ! | AGCATAACTGTGTTAGATTT+TGG | - | chr3.3:83172536-83172555 | MS.gene37925:intron | 30.0% |
| ! | AGGTTTTGCTGGTAATTATT+GGG | + | chr3.3:83172810-83172829 | None:intergenic | 30.0% |
| ! | CTTCTTTCTGAAGAAAGTAA+CGG | - | chr3.3:83173646-83173665 | MS.gene37925:CDS | 30.0% |
| ! | GCATAACTGTGTTAGATTTT+GGG | - | chr3.3:83172537-83172556 | MS.gene37925:intron | 30.0% |
| ! | TACTGTAAAATCAAGGTATC+TGG | - | chr3.3:83174149-83174168 | MS.gene37925:intron | 30.0% |
| ! | TCACATAATGGCTTCTTTTT+GGG | + | chr3.3:83174021-83174040 | None:intergenic | 30.0% |
| ! | TTATGACCTTTTATCTCTCA+TGG | - | chr3.3:83171347-83171366 | MS.gene37925:intron | 30.0% |
| !! | AGGTAAACATTAGTTTGCAT+TGG | - | chr3.3:83170659-83170678 | MS.gene37925:intron | 30.0% |
| !! | TGAGACTTACTTTTCGATAT+TGG | + | chr3.3:83172139-83172158 | None:intergenic | 30.0% |
| AAAAGCAACATTACGAAGAG+AGG | - | chr3.3:83169964-83169983 | MS.gene37925:CDS | 35.0% | |
| AACAGTGCTCAAGTATCTTA+TGG | - | chr3.3:83171122-83171141 | MS.gene37925:intron | 35.0% | |
| AACTGAATTTGATTGGTGTG+GGG | - | chr3.3:83172752-83172771 | MS.gene37925:CDS | 35.0% | |
| AAGAATAAACTGGATATCCC+CGG | - | chr3.3:83173670-83173689 | MS.gene37925:intron | 35.0% | |
| AAGTAACGGCAAGAATAAAC+TGG | - | chr3.3:83173660-83173679 | MS.gene37925:CDS | 35.0% | |
| AATTTGGTAGACTGAGATTG+AGG | - | chr3.3:83170537-83170556 | MS.gene37925:CDS | 35.0% | |
| ACAAAAGGGGAATGATTCTT+CGG | - | chr3.3:83170570-83170589 | MS.gene37925:CDS | 35.0% | |
| ACAGTGCTCAAGTATCTTAT+GGG | - | chr3.3:83171123-83171142 | MS.gene37925:intron | 35.0% | |
| ACTTGAAAAGGAAGTTCTTC+AGG | - | chr3.3:83171024-83171043 | MS.gene37925:CDS | 35.0% | |
| AGAAGATCTGAATGCATGTT+TGG | - | chr3.3:83171533-83171552 | MS.gene37925:intron | 35.0% | |
| AGTCTGTTGAAGACCTATAA+AGG | + | chr3.3:83172205-83172224 | None:intergenic | 35.0% | |
| ATATGCTGATACTAACCCAA+AGG | + | chr3.3:83171192-83171211 | None:intergenic | 35.0% | |
| ATGCAAGGCTTTACTTGAAA+AGG | - | chr3.3:83171012-83171031 | MS.gene37925:intron | 35.0% | |
| ATTGTAATGCATATCTCTGG+TGG | - | chr3.3:83172256-83172275 | MS.gene37925:intron | 35.0% | |
| CAACTGAATTTGATTGGTGT+GGG | - | chr3.3:83172751-83172770 | MS.gene37925:CDS | 35.0% | |
| CAATTTCATCACGCATTGTT+TGG | - | chr3.3:83170034-83170053 | MS.gene37925:intron | 35.0% | |
| CATGCTCATAAAACGAGAAA+TGG | + | chr3.3:83172951-83172970 | None:intergenic | 35.0% | |
| CTGGAAATAAGTATTAGGCA+AGG | + | chr3.3:83172182-83172201 | None:intergenic | 35.0% | |
| GAACAAGTAAACAACCTTAG+TGG | - | chr3.3:83173397-83173416 | MS.gene37925:CDS | 35.0% | |
| GAATGCTCTACGAATAAAGA+TGG | - | chr3.3:83173913-83173932 | MS.gene37925:intron | 35.0% | |
| GGGAAGAAGGAATGAAATAA+AGG | - | chr3.3:83171256-83171275 | MS.gene37925:intron | 35.0% | |
| GTAGAAGAGGGATTGTTTAT+TGG | - | chr3.3:83170506-83170525 | MS.gene37925:CDS | 35.0% | |
| GTTGCTTGTTTATTAAACCG+TGG | - | chr3.3:83173594-83173613 | MS.gene37925:CDS | 35.0% | |
| TAAAGAATTGCAATTGCGGA+AGG | - | chr3.3:83173426-83173445 | MS.gene37925:CDS | 35.0% | |
| TATCATCAAAATCCTTCTCG+GGG | + | chr3.3:83173363-83173382 | None:intergenic | 35.0% | |
| TATGCTGATACTAACCCAAA+GGG | + | chr3.3:83171191-83171210 | None:intergenic | 35.0% | |
| TGAATCAAAAGCTTCAACAC+CGG | - | chr3.3:83172863-83172882 | MS.gene37925:intron | 35.0% | |
| TTAGGCAAGGAAGAGAATAT+CGG | + | chr3.3:83172169-83172188 | None:intergenic | 35.0% | |
| TTCTAACCAGACGCTTAAAA+TGG | - | chr3.3:83171295-83171314 | MS.gene37925:intron | 35.0% | |
| TTGGACACATTCTCAAATAC+GGG | + | chr3.3:83171842-83171861 | None:intergenic | 35.0% | |
| TTGTAATGCATATCTCTGGT+GGG | - | chr3.3:83172257-83172276 | MS.gene37925:intron | 35.0% | |
| ! | CTTTTGCGCAACTTTATGTT+GGG | - | chr3.3:83172407-83172426 | MS.gene37925:intron | 35.0% |
| ! | GTCACATAATGGCTTCTTTT+TGG | + | chr3.3:83174022-83174041 | None:intergenic | 35.0% |
| ! | TCTTTTGCGCAACTTTATGT+TGG | - | chr3.3:83172406-83172425 | MS.gene37925:intron | 35.0% |
| ! | TGTTGAATTCAAGGTTTTGC+TGG | + | chr3.3:83172821-83172840 | None:intergenic | 35.0% |
| ! | TTGGTAACAAGCTGAATTAC+CGG | + | chr3.3:83174282-83174301 | None:intergenic | 35.0% |
| ! | TTTGGAACCTACATGAGAAA+CGG | + | chr3.3:83171625-83171644 | None:intergenic | 35.0% |
| ! | TTTTGCGCAACTTTATGTTG+GGG | - | chr3.3:83172408-83172427 | MS.gene37925:intron | 35.0% |
| !! | AGGTTCTAAGTGCACAAATA+GGG | - | chr3.3:83173840-83173859 | MS.gene37925:intron | 35.0% |
| !! | AGTTTTTAAAAGCTGACCAG+TGG | - | chr3.3:83172479-83172498 | MS.gene37925:intron | 35.0% |
| !! | CTTATTCAAGAGGCACTTAT+TGG | - | chr3.3:83172781-83172800 | MS.gene37925:intron | 35.0% |
| !! | GTGTTGAAGCTTTTGATTCA+TGG | + | chr3.3:83172863-83172882 | None:intergenic | 35.0% |
| !!! | ATGTTGCTTTTCGTTTGAGT+CGG | + | chr3.3:83169955-83169974 | None:intergenic | 35.0% |
| !!! | CTCCCTTTTTTGTTACTTCA+AGG | - | chr3.3:83173308-83173327 | MS.gene37925:intron | 35.0% |
| !!! | GATGTTATTTTTCCTGTCAC+TGG | - | chr3.3:83171726-83171745 | MS.gene37925:intron | 35.0% |
| AAGAAGAAGTTGAGATGCAC+AGG | - | chr3.3:83173174-83173193 | MS.gene37925:intron | 40.0% | |
| AAGTGCACTCTCTAGTAGTT+TGG | + | chr3.3:83173962-83173981 | None:intergenic | 40.0% | |
| AGAAGAAGTTGAGATGCACA+GGG | - | chr3.3:83173175-83173194 | MS.gene37925:intron | 40.0% | |
| ATAGTACTGTCTACGCATAC+TGG | + | chr3.3:83172984-83173003 | None:intergenic | 40.0% | |
| ATATTCTAATCAGCAGGACC+TGG | - | chr3.3:83173618-83173637 | MS.gene37925:CDS | 40.0% | |
| CACGTGACAATTTGATTGCA+GGG | - | chr3.3:83174210-83174229 | MS.gene37925:CDS | 40.0% | |
| CAGTAGCCTGATTAACATGT+AGG | - | chr3.3:83172016-83172035 | MS.gene37925:intron | 40.0% | |
| CATACAAGCGGTTAGAATAG+AGG | + | chr3.3:83173123-83173142 | None:intergenic | 40.0% | |
| CCACAACCATGAGAGATAAA+AGG | + | chr3.3:83171356-83171375 | None:intergenic | 40.0% | |
| CTACTGATGTAGTATGGAAC+CGG | + | chr3.3:83172885-83172904 | None:intergenic | 40.0% | |
| CTAGGACATGTTAAGGTTTG+TGG | - | chr3.3:83171816-83171835 | MS.gene37925:intron | 40.0% | |
| CTCTATTCTAACCGCTTGTA+TGG | - | chr3.3:83173121-83173140 | MS.gene37925:intron | 40.0% | |
| CTGTTAGAGACTTCGATTAG+AGG | - | chr3.3:83172637-83172656 | MS.gene37925:intron | 40.0% | |
| CTTCAGAAAGAAGAAGATCC+AGG | + | chr3.3:83173639-83173658 | None:intergenic | 40.0% | |
| GAAAAAGAATACCAGGAAGC+CGG | - | chr3.3:83174260-83174279 | MS.gene37925:CDS | 40.0% | |
| GAGAAACGGCAAAGAAAGAA+AGG | + | chr3.3:83171611-83171630 | None:intergenic | 40.0% | |
| GATTCTTCGGCTTCTAATGA+TGG | - | chr3.3:83170583-83170602 | MS.gene37925:intron | 40.0% | |
| GCAACTGAATTTGATTGGTG+TGG | - | chr3.3:83172750-83172769 | MS.gene37925:CDS | 40.0% | |
| GCTGAACTTACTTGAAGATC+AGG | - | chr3.3:83170639-83170658 | MS.gene37925:intron | 40.0% | |
| GGGGAAGAAACTTATTCAAG+AGG | - | chr3.3:83172771-83172790 | MS.gene37925:CDS | 40.0% | |
| GGTGACTAAGATCAGAGTTA+TGG | + | chr3.3:83174072-83174091 | None:intergenic | 40.0% | |
| GTATAAACAATGACTGGTGC+AGG | - | chr3.3:83172053-83172072 | MS.gene37925:intron | 40.0% | |
| GTTAGGCCTACATGTTAATC+AGG | + | chr3.3:83172025-83172044 | None:intergenic | 40.0% | |
| TCAGAGTTTGAAAGCTCAGA+AGG | - | chr3.3:83170840-83170859 | MS.gene37925:CDS | 40.0% | |
| TGAAGAATACCAGTGAGTTC+TGG | + | chr3.3:83174047-83174066 | None:intergenic | 40.0% | |
| TGATTCCAGAGAAATGAAGC+AGG | - | chr3.3:83173456-83173475 | MS.gene37925:CDS | 40.0% | |
| TGCTCTACGAATAAAGATGG+AGG | - | chr3.3:83173916-83173935 | MS.gene37925:intron | 40.0% | |
| TGTGCGATTCAGATTATGCA+AGG | - | chr3.3:83170997-83171016 | MS.gene37925:intron | 40.0% | |
| TGTTGAAGACCTATAAAGGC+TGG | + | chr3.3:83172201-83172220 | None:intergenic | 40.0% | |
| ! | AACGAACCATTTTAAGCGTC+TGG | + | chr3.3:83171304-83171323 | None:intergenic | 40.0% |
| ! | ACATAACTTGTGCAACTGAG+TGG | + | chr3.3:83172103-83172122 | None:intergenic | 40.0% |
| ! | ACCTTGTTTCCTTTCCACTT+TGG | - | chr3.3:83171767-83171786 | MS.gene37925:intron | 40.0% |
| ! | ACGTGGATTAATGAGCAAGT+TGG | + | chr3.3:83174195-83174214 | None:intergenic | 40.0% |
| ! | CCTTTTATCTCTCATGGTTG+TGG | - | chr3.3:83171353-83171372 | MS.gene37925:intron | 40.0% |
| ! | CGTGGATTAATGAGCAAGTT+GGG | + | chr3.3:83174194-83174213 | None:intergenic | 40.0% |
| ! | CTGCTGATTAGAATATGCCA+CGG | + | chr3.3:83173614-83173633 | None:intergenic | 40.0% |
| ! | GCTTCCTGGTATTCTTTTTC+CGG | + | chr3.3:83174260-83174279 | None:intergenic | 40.0% |
| ! | TGAGGTATTAGTAGCTTGCA+CGG | - | chr3.3:83172715-83172734 | MS.gene37925:CDS | 40.0% |
| ! | TTCTTTGCCGTTTCTCATGT+AGG | - | chr3.3:83171615-83171634 | MS.gene37925:intron | 40.0% |
| !! | AAGACAAAGGCTGTTTCTGT+TGG | - | chr3.3:83171956-83171975 | MS.gene37925:intron | 40.0% |
| !! | CAGGTTCTAAGTGCACAAAT+AGG | - | chr3.3:83173839-83173858 | MS.gene37925:intron | 40.0% |
| !! | GAGTTCTGGATGTCACATAA+TGG | + | chr3.3:83174033-83174052 | None:intergenic | 40.0% |
| !! | GGTAATTCAGCTTGTTACCA+AGG | - | chr3.3:83174281-83174300 | MS.gene37925:CDS | 40.0% |
| !!! | GGCTAAATGCTGTTTTCTGA+TGG | - | chr3.3:83172336-83172355 | MS.gene37925:intron | 40.0% |
| !!! | TTTTCTGCCACTGATTTCAG+TGG | + | chr3.3:83173868-83173887 | None:intergenic | 40.0% |
| !!! | TTTTCTGGAGTTGAGGACAT+TGG | + | chr3.3:83174309-83174328 | None:intergenic | 40.0% |
| !!! | TTTTTTTCTCGTGCTGTTGC+AGG | - | chr3.3:83170723-83170742 | MS.gene37925:intron | 40.0% |
| AATGTTCGGCCAAAGTGGAA+AGG | + | chr3.3:83171779-83171798 | None:intergenic | 45.0% | |
| ACGAGAGAACAAAGCGTATC+AGG | - | chr3.3:83170001-83170020 | MS.gene37925:intron | 45.0% | |
| AGCTTAAGAAGGAGGGAAGA+AGG | - | chr3.3:83171243-83171262 | MS.gene37925:intron | 45.0% | |
| AGTCATCCTGACCATACAAG+CGG | + | chr3.3:83173135-83173154 | None:intergenic | 45.0% | |
| AGTTGAGGACATTGGATCCT+TGG | + | chr3.3:83174301-83174320 | None:intergenic | 45.0% | |
| ATGTGACATCCAGAACTCAC+TGG | - | chr3.3:83174035-83174054 | MS.gene37925:intron | 45.0% | |
| ATTGCTTGACTTCTACGAGC+TGG | - | chr3.3:83173243-83173262 | MS.gene37925:CDS | 45.0% | |
| CATGGTTGTGGCTATTCACT+TGG | - | chr3.3:83171365-83171384 | MS.gene37925:intron | 45.0% | |
| CCACGTGACAATTTGATTGC+AGG | - | chr3.3:83174209-83174228 | MS.gene37925:CDS | 45.0% | |
| CCAGAGAAATGAAGCAGGTT+CGG | - | chr3.3:83173461-83173480 | MS.gene37925:CDS | 45.0% | |
| CCTGCAATCAAATTGTCACG+TGG | + | chr3.3:83174212-83174231 | None:intergenic | 45.0% | |
| CGTGGCATATTCTAATCAGC+AGG | - | chr3.3:83173612-83173631 | MS.gene37925:CDS | 45.0% | |
| GCCAAAGTGGAAAGGAAACA+AGG | + | chr3.3:83171771-83171790 | None:intergenic | 45.0% | |
| GGTATTGCAACGAAAGACTG+AGG | - | chr3.3:83171435-83171454 | MS.gene37925:intron | 45.0% | |
| TAAAAGCTGACCAGTGGAAG+TGG | - | chr3.3:83172485-83172504 | MS.gene37925:intron | 45.0% | |
| TACTTCAAGGTCTCAGTCAC+AGG | - | chr3.3:83173321-83173340 | MS.gene37925:intron | 45.0% | |
| TAGATGCTCAAAAGCTAGGC+CGG | - | chr3.3:83174238-83174257 | MS.gene37925:CDS | 45.0% | |
| TAGGCCGGAAAAAGAATACC+AGG | - | chr3.3:83174253-83174272 | MS.gene37925:CDS | 45.0% | |
| TAGGGAACCACTGAAATCAG+TGG | - | chr3.3:83173858-83173877 | MS.gene37925:intron | 45.0% | |
| TGCACAGGGAGGAAATATCA+AGG | - | chr3.3:83173189-83173208 | MS.gene37925:CDS | 45.0% | |
| TTCAGTTGAACCGCTCATTC+CGG | + | chr3.3:83173692-83173711 | None:intergenic | 45.0% | |
| TTCTAACCGCTTGTATGGTC+AGG | - | chr3.3:83173126-83173145 | MS.gene37925:intron | 45.0% | |
| TTTCCACTTTGGCCGAACAT+TGG | - | chr3.3:83171778-83171797 | MS.gene37925:intron | 45.0% | |
| ! | AAGAGAGAAAGAGCACGTGA+AGG | - | chr3.3:83173721-83173740 | MS.gene37925:intron | 45.0% |
| ! | AGAGAGAAAGAGCACGTGAA+GGG | - | chr3.3:83173722-83173741 | MS.gene37925:intron | 45.0% |
| ! | CGCATTGTTTGGTTCAGATC+TGG | - | chr3.3:83170045-83170064 | MS.gene37925:intron | 45.0% |
| ! | GCACTTTGTAGTCTTGCACA+AGG | + | chr3.3:83173773-83173792 | None:intergenic | 45.0% |
| ! | GTATTAGTAGCTTGCACGGT+TGG | - | chr3.3:83172719-83172738 | MS.gene37925:CDS | 45.0% |
| ! | TGCTTTTCGTTTGAGTCGGA+AGG | + | chr3.3:83169951-83169970 | None:intergenic | 45.0% |
| !!! | GCTTGCACGGTTGGTTTTTT+AGG | - | chr3.3:83172728-83172747 | MS.gene37925:CDS | 45.0% |
| AAGACTCTTGAGCCAGTGAC+AGG | + | chr3.3:83171741-83171760 | None:intergenic | 50.0% | |
| AATCCTTCTCGGGGCTGTTA+AGG | + | chr3.3:83173354-83173373 | None:intergenic | 50.0% | |
| ACAATGACTGGTGCAGGATG+CGG | - | chr3.3:83172059-83172078 | MS.gene37925:intron | 50.0% | |
| AGAAGTTGAGATGCACAGGG+AGG | - | chr3.3:83173178-83173197 | MS.gene37925:intron | 50.0% | |
| CCGAACCTGCTTCATTTCTC+TGG | + | chr3.3:83173464-83173483 | None:intergenic | 50.0% | |
| GCGCAACTTTATGTTGGGGT+GGG | - | chr3.3:83172412-83172431 | MS.gene37925:intron | 50.0% | |
| TCAGTTGAACCGCTCATTCC+GGG | + | chr3.3:83173691-83173710 | None:intergenic | 50.0% | |
| TGACCAATGTTCGGCCAAAG+TGG | + | chr3.3:83171784-83171803 | None:intergenic | 50.0% | |
| TGCGCAACTTTATGTTGGGG+TGG | - | chr3.3:83172411-83172430 | MS.gene37925:intron | 50.0% | |
| ! | TCGGAAGGTGATGCATCGAT+TGG | + | chr3.3:83169936-83169955 | None:intergenic | 50.0% |
| !! | AAGCTGAATTACCGGCTTCC+TGG | + | chr3.3:83174274-83174293 | None:intergenic | 50.0% |
| !! | AGGTGATGCATCGATTGGAC+TGG | + | chr3.3:83169931-83169950 | None:intergenic | 50.0% |
| AAGTGCCAATGCCGATCCAC+CGG | - | chr3.3:83173787-83173806 | MS.gene37925:intron | 55.0% | |
| AGACCTTAACAGCCCCGAGA+AGG | - | chr3.3:83173348-83173367 | MS.gene37925:intron | 55.0% | |
| CAGTTGAACCGCTCATTCCG+GGG | + | chr3.3:83173690-83173709 | None:intergenic | 55.0% | |
| CCAGTCGCAGAGACAATCAG+GGG | - | chr3.3:83173995-83174014 | MS.gene37925:intron | 55.0% | |
| CTGGATATCCCCGGAATGAG+CGG | - | chr3.3:83173679-83173698 | MS.gene37925:intron | 55.0% | |
| GAACCTGTGCAGCCACATGA+TGG | + | chr3.3:83173826-83173845 | None:intergenic | 55.0% | |
| GCCAGTCGCAGAGACAATCA+GGG | - | chr3.3:83173994-83174013 | MS.gene37925:intron | 55.0% | |
| GGAAGCTGTGGACCATCATG+TGG | - | chr3.3:83173811-83173830 | MS.gene37925:intron | 55.0% | |
| TGATGGTCCACAGCTTCCAC+CGG | + | chr3.3:83173809-83173828 | None:intergenic | 55.0% | |
| TGATTGTCTCTGCGACTGGC+AGG | + | chr3.3:83173994-83174013 | None:intergenic | 55.0% | |
| TGCCAGTCGCAGAGACAATC+AGG | - | chr3.3:83173993-83174012 | MS.gene37925:intron | 55.0% | |
| CACAGCTTCCACCGGTGGAT+CGG | + | chr3.3:83173801-83173820 | None:intergenic | 60.0% | |
| CCCCTGATTGTCTCTGCGAC+TGG | + | chr3.3:83173998-83174017 | None:intergenic | 60.0% | |
| GGACCATCATGTGGCTGCAC+AGG | - | chr3.3:83173820-83173839 | MS.gene37925:intron | 60.0% | |
| TTCCACCGGTGGATCGGCAT+TGG | + | chr3.3:83173795-83173814 | None:intergenic | 60.0% | |
| CGATCCACCGGTGGAAGCTG+TGG | - | chr3.3:83173799-83173818 | MS.gene37925:intron | 65.0% | |
| TGCCAATGCCGATCCACCGG+TGG | - | chr3.3:83173790-83173809 | MS.gene37925:intron | 65.0% | |
| TGGTCCACAGCTTCCACCGG+TGG | + | chr3.3:83173806-83173825 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 83169897 | 83174332 | 83169897 | ID=MS.gene37925 |
| chr3.3 | mRNA | 83169897 | 83174332 | 83169897 | ID=MS.gene37925.t1;Parent=MS.gene37925 |
| chr3.3 | exon | 83174207 | 83174332 | 83174207 | ID=MS.gene37925.t1.exon1;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83174207 | 83174332 | 83174207 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83173569 | 83173682 | 83173569 | ID=MS.gene37925.t1.exon2;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83173569 | 83173682 | 83173569 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83173368 | 83173484 | 83173368 | ID=MS.gene37925.t1.exon3;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83173368 | 83173484 | 83173368 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83173184 | 83173264 | 83173184 | ID=MS.gene37925.t1.exon4;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83173184 | 83173264 | 83173184 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83172913 | 83172984 | 83172913 | ID=MS.gene37925.t1.exon5;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83172913 | 83172984 | 83172913 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83172700 | 83172793 | 83172700 | ID=MS.gene37925.t1.exon6;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83172700 | 83172793 | 83172700 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83172561 | 83172592 | 83172561 | ID=MS.gene37925.t1.exon7;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83172561 | 83172592 | 83172561 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83172081 | 83172154 | 83172081 | ID=MS.gene37925.t1.exon8;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83172081 | 83172154 | 83172081 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83171019 | 83171081 | 83171019 | ID=MS.gene37925.t1.exon9;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83171019 | 83171081 | 83171019 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83170752 | 83170899 | 83170752 | ID=MS.gene37925.t1.exon10;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83170752 | 83170899 | 83170752 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83170173 | 83170595 | 83170173 | ID=MS.gene37925.t1.exon11;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83170173 | 83170595 | 83170173 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| chr3.3 | exon | 83169897 | 83169998 | 83169897 | ID=MS.gene37925.t1.exon12;Parent=MS.gene37925.t1 |
| chr3.3 | CDS | 83169897 | 83169998 | 83169897 | ID=cds.MS.gene37925.t1;Parent=MS.gene37925.t1 |
| Gene Sequence |
| Protein sequence |
