Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44008.t1 | XP_013468987.1 | 96.8 | 379 | 4 | 1 | 1 | 371 | 1 | 379 | 1.20E-215 | 758.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44008.t1 | Q93VR3 | 89.4 | 377 | 32 | 1 | 1 | 369 | 1 | 377 | 6.2e-202 | 704.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44008.t1 | A0A072VNM9 | 96.8 | 379 | 4 | 1 | 1 | 371 | 37 | 415 | 8.3e-216 | 758.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene44008 | 0.832574 | 8.75E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene44008 | 0.806764 | 7.02E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene44008 | 0.8066 | 7.60E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene44008 | 0.844265 | 8.42E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene44008 | 0.8567 | 2.69E-62 | -1.69E-46 |
| MS.gene050432 | MS.gene44008 | 0.819538 | 1.10E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene44008 | 0.812126 | 4.96E-51 | -1.69E-46 |
| MS.gene050787 | MS.gene44008 | 0.806652 | 7.41E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene44008 | 0.811888 | 5.59E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene44008 | -0.813694 | 2.25E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene44008 | 0.808445 | 3.09E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene44008 | 0.837793 | 4.21E-57 | -1.69E-46 |
| MS.gene051860 | MS.gene44008 | 0.823491 | 1.35E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene44008 | 0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene052207 | MS.gene44008 | 0.801681 | 8.03E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene44008 | 0.836685 | 8.10E-57 | -1.69E-46 |
| MS.gene052326 | MS.gene44008 | 0.819685 | 1.02E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene44008 | 0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene44008 | 0.870014 | 2.01E-66 | -1.69E-46 |
| MS.gene054011 | MS.gene44008 | 0.819625 | 1.05E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene44008 | 0.808488 | 3.02E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene44008 | 0.803887 | 2.81E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene44008 | 0.843479 | 1.37E-58 | -1.69E-46 |
| MS.gene054930 | MS.gene44008 | 0.806314 | 8.73E-50 | -1.69E-46 |
| MS.gene054942 | MS.gene44008 | 0.80085 | 1.19E-48 | -1.69E-46 |
| MS.gene055277 | MS.gene44008 | 0.867077 | 1.78E-65 | -1.69E-46 |
| MS.gene055390 | MS.gene44008 | 0.829726 | 4.38E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene44008 | 0.848084 | 7.68E-60 | -1.69E-46 |
| MS.gene055428 | MS.gene44008 | 0.846134 | 2.63E-59 | -1.69E-46 |
| MS.gene055604 | MS.gene44008 | 0.812102 | 5.02E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene44008 | 0.817184 | 3.76E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene44008 | 0.802588 | 5.22E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene44008 | 0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene05702 | MS.gene44008 | 0.819465 | 1.14E-52 | -1.69E-46 |
| MS.gene057121 | MS.gene44008 | 0.828015 | 1.14E-54 | -1.69E-46 |
| MS.gene057245 | MS.gene44008 | 0.822191 | 2.70E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene44008 | 0.81232 | 4.50E-51 | -1.69E-46 |
| MS.gene057449 | MS.gene44008 | 0.803386 | 3.57E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene44008 | 0.806241 | 9.05E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene44008 | 0.834904 | 2.29E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene44008 | 0.801564 | 8.49E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene44008 | 0.857692 | 1.37E-62 | -1.69E-46 |
| MS.gene05811 | MS.gene44008 | 0.844604 | 6.82E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene44008 | 0.843863 | 1.08E-58 | -1.69E-46 |
| MS.gene058710 | MS.gene44008 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene44008 | 0.80356 | 3.29E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene44008 | 0.85321 | 2.78E-61 | -1.69E-46 |
| MS.gene059285 | MS.gene44008 | 0.80857 | 2.90E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene44008 | 0.818427 | 1.97E-52 | -1.69E-46 |
| MS.gene059518 | MS.gene44008 | 0.808896 | 2.47E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene44008 | 0.821262 | 4.43E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene44008 | 0.818431 | 1.97E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene44008 | 0.812583 | 3.94E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene44008 | 0.812066 | 5.11E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene44008 | 0.838278 | 3.16E-57 | -1.69E-46 |
| MS.gene06037 | MS.gene44008 | 0.827814 | 1.27E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene44008 | 0.836711 | 7.97E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44008 | MS.gene68222 | PPI |
| MS.gene064894 | MS.gene44008 | PPI |
| MS.gene44008 | MS.gene063165 | PPI |
| MS.gene44008 | MS.gene014281 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44008.t1 | MTR_1g080950 | 96.834 | 379 | 4 | 1 | 1 | 371 | 1 | 379 | 0.0 | 764 |
| MS.gene44008.t1 | MTR_1g080950 | 96.834 | 379 | 4 | 1 | 1 | 371 | 37 | 415 | 0.0 | 761 |
| MS.gene44008.t1 | MTR_7g115080 | 88.889 | 378 | 32 | 3 | 1 | 369 | 35 | 411 | 0.0 | 704 |
| MS.gene44008.t1 | MTR_7g115080 | 88.889 | 378 | 32 | 3 | 1 | 369 | 1 | 377 | 0.0 | 702 |
| MS.gene44008.t1 | MTR_7g115080 | 88.889 | 378 | 32 | 3 | 1 | 369 | 14 | 390 | 0.0 | 701 |
| MS.gene44008.t1 | MTR_4g120030 | 27.215 | 316 | 203 | 9 | 29 | 332 | 112 | 412 | 5.11e-24 | 102 |
| MS.gene44008.t1 | MTR_1g088480 | 26.154 | 325 | 211 | 10 | 28 | 339 | 118 | 426 | 2.17e-22 | 98.2 |
| MS.gene44008.t1 | MTR_2g096660 | 27.389 | 314 | 195 | 12 | 28 | 323 | 38 | 336 | 1.95e-20 | 91.7 |
| MS.gene44008.t1 | MTR_4g063600 | 26.837 | 313 | 198 | 10 | 28 | 323 | 32 | 330 | 5.12e-20 | 90.5 |
| MS.gene44008.t1 | MTR_4g063600 | 26.837 | 313 | 195 | 11 | 28 | 323 | 32 | 327 | 1.02e-18 | 86.7 |
| MS.gene44008.t1 | MTR_7g108490 | 23.529 | 323 | 212 | 8 | 29 | 334 | 15 | 319 | 7.31e-18 | 84.0 |
| MS.gene44008.t1 | MTR_7g108490 | 23.529 | 323 | 212 | 8 | 29 | 334 | 16 | 320 | 7.54e-18 | 84.0 |
| MS.gene44008.t1 | MTR_4g024600 | 26.230 | 244 | 153 | 9 | 28 | 256 | 101 | 332 | 3.19e-13 | 70.9 |
| MS.gene44008.t1 | MTR_4g102270 | 24.118 | 340 | 207 | 11 | 30 | 330 | 95 | 422 | 7.32e-13 | 69.7 |
| MS.gene44008.t1 | MTR_5g011940 | 23.324 | 343 | 204 | 12 | 28 | 327 | 90 | 416 | 3.38e-12 | 67.8 |
| MS.gene44008.t1 | MTR_2g073240 | 27.237 | 257 | 159 | 12 | 30 | 271 | 21 | 264 | 8.55e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44008.t1 | AT5G28840 | 89.390 | 377 | 32 | 1 | 1 | 369 | 1 | 377 | 0.0 | 709 |
| MS.gene44008.t1 | AT5G28840 | 89.390 | 377 | 32 | 1 | 1 | 369 | 1 | 377 | 0.0 | 709 |
| MS.gene44008.t1 | AT3G62830 | 26.543 | 324 | 216 | 10 | 28 | 339 | 119 | 432 | 2.11e-24 | 104 |
| MS.gene44008.t1 | AT3G62830 | 26.543 | 324 | 216 | 10 | 28 | 339 | 119 | 432 | 2.11e-24 | 104 |
| MS.gene44008.t1 | AT2G47650 | 26.625 | 323 | 215 | 10 | 28 | 338 | 121 | 433 | 4.66e-24 | 103 |
| MS.gene44008.t1 | AT2G47650 | 26.140 | 329 | 215 | 9 | 28 | 338 | 121 | 439 | 5.13e-24 | 103 |
| MS.gene44008.t1 | AT3G53520 | 26.829 | 328 | 217 | 11 | 26 | 340 | 118 | 435 | 1.57e-23 | 101 |
| MS.gene44008.t1 | AT3G53520 | 25.212 | 353 | 214 | 12 | 26 | 340 | 118 | 458 | 6.63e-21 | 94.4 |
| MS.gene44008.t1 | AT2G28760 | 27.687 | 307 | 199 | 11 | 28 | 321 | 31 | 327 | 1.12e-20 | 92.4 |
| MS.gene44008.t1 | AT2G28760 | 27.687 | 307 | 199 | 11 | 28 | 321 | 31 | 327 | 1.12e-20 | 92.4 |
| MS.gene44008.t1 | AT2G28760 | 27.687 | 307 | 199 | 11 | 28 | 321 | 31 | 327 | 1.12e-20 | 92.4 |
| MS.gene44008.t1 | AT3G53520 | 26.220 | 328 | 217 | 12 | 26 | 340 | 118 | 433 | 1.76e-20 | 92.8 |
| MS.gene44008.t1 | AT3G46440 | 27.331 | 311 | 195 | 12 | 28 | 321 | 29 | 325 | 1.82e-20 | 91.7 |
| MS.gene44008.t1 | AT3G46440 | 27.331 | 311 | 195 | 12 | 28 | 321 | 29 | 325 | 1.82e-20 | 91.7 |
| MS.gene44008.t1 | AT2G28760 | 27.687 | 307 | 199 | 11 | 28 | 321 | 62 | 358 | 3.07e-20 | 91.3 |
| MS.gene44008.t1 | AT1G17890 | 24.615 | 325 | 210 | 9 | 29 | 336 | 13 | 319 | 8.37e-20 | 89.4 |
| MS.gene44008.t1 | AT1G17890 | 24.615 | 325 | 210 | 9 | 29 | 336 | 13 | 319 | 8.37e-20 | 89.4 |
| MS.gene44008.t1 | AT1G73250 | 24.444 | 315 | 205 | 7 | 29 | 327 | 18 | 315 | 8.78e-20 | 89.4 |
| MS.gene44008.t1 | AT1G17890 | 24.615 | 325 | 210 | 9 | 29 | 336 | 21 | 327 | 1.08e-19 | 89.4 |
| MS.gene44008.t1 | AT5G59290 | 26.688 | 311 | 197 | 12 | 28 | 321 | 1 | 297 | 1.10e-19 | 89.0 |
| MS.gene44008.t1 | AT5G59290 | 26.688 | 311 | 197 | 12 | 28 | 321 | 30 | 326 | 1.28e-19 | 89.4 |
| MS.gene44008.t1 | AT5G59290 | 26.688 | 311 | 197 | 12 | 28 | 321 | 45 | 341 | 1.46e-19 | 89.4 |
| MS.gene44008.t1 | AT5G59290 | 26.688 | 311 | 197 | 12 | 28 | 321 | 23 | 319 | 2.69e-19 | 88.2 |
| MS.gene44008.t1 | AT3G23820 | 25.414 | 362 | 211 | 13 | 28 | 343 | 112 | 460 | 7.21e-16 | 79.3 |
| MS.gene44008.t1 | AT2G45310 | 25.513 | 341 | 199 | 13 | 28 | 327 | 97 | 423 | 1.75e-15 | 77.8 |
| MS.gene44008.t1 | AT1G02000 | 26.639 | 244 | 152 | 8 | 28 | 256 | 92 | 323 | 1.39e-13 | 72.0 |
| MS.gene44008.t1 | AT4G00110 | 24.412 | 340 | 204 | 12 | 28 | 327 | 91 | 417 | 2.18e-13 | 71.6 |
| MS.gene44008.t1 | AT1G53500 | 25.076 | 327 | 211 | 13 | 30 | 333 | 11 | 326 | 3.06e-12 | 68.6 |
| MS.gene44008.t1 | AT4G30440 | 26.230 | 244 | 153 | 8 | 28 | 256 | 88 | 319 | 1.01e-11 | 66.2 |
| MS.gene44008.t1 | AT1G78570 | 25.688 | 327 | 209 | 14 | 30 | 333 | 9 | 324 | 1.78e-11 | 66.2 |
Find 99 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAACATATATGGTCCTTT+TGG | 0.258635 | 1.3:+57372223 | MS.gene44008:CDS |
| CTGCCCGAAGTGAGCCTAAT+TGG | 0.271744 | 1.3:-57373443 | None:intergenic |
| ATTGAAGCTGCTAGGATTAA+TGG | 0.272992 | 1.3:+57371778 | MS.gene44008:CDS |
| TTCCGCGAGCCGGTAAATAT+TGG | 0.274622 | 1.3:+57372911 | MS.gene44008:CDS |
| GTTTCTAACTGTTTAAATTC+AGG | 0.285374 | 1.3:-57371963 | None:intergenic |
| ATCTTGAGAGAGAGCCTTAC+TGG | 0.304697 | 1.3:+57371446 | MS.gene44008:CDS |
| TTTCAATCTTGCCGCTGATA+TGG | 0.324249 | 1.3:+57371684 | MS.gene44008:CDS |
| GAGATGGCTGAGATCGTTCT+TGG | 0.352457 | 1.3:+57372967 | MS.gene44008:intron |
| TATACCTTCAACTTCATTGT+TGG | 0.357453 | 1.3:-57373093 | None:intergenic |
| GCCTAATTGGACCGGTGCTT+GGG | 0.360185 | 1.3:-57373430 | None:intergenic |
| AATTCCATCTTGTTGATCTC+AGG | 0.363929 | 1.3:+57371617 | MS.gene44008:CDS |
| AAAATTTCCATCACTGGTGC+TGG | 0.368034 | 1.3:+57371484 | MS.gene44008:CDS |
| ATTTACCGGCTCGCGGAAAT+CGG | 0.371961 | 1.3:-57372906 | None:intergenic |
| CAAAAGGACCATATATGTTA+TGG | 0.374113 | 1.3:-57372222 | None:intergenic |
| AAGCACTACAACAAAGATTT+CGG | 0.376422 | 1.3:+57372175 | MS.gene44008:CDS |
| TCATCACTTCCAATATTTAC+CGG | 0.378878 | 1.3:-57372920 | None:intergenic |
| AGCCTAATTGGACCGGTGCT+TGG | 0.382304 | 1.3:-57373431 | None:intergenic |
| TTCAATCTTGCCGCTGATAT+GGG | 0.385962 | 1.3:+57371685 | MS.gene44008:CDS |
| GATTACATATGTCTGGATTA+AGG | 0.386996 | 1.3:+57373338 | MS.gene44008:CDS |
| GGGAGGTTCCATAACATATA+TGG | 0.396979 | 1.3:+57372214 | MS.gene44008:CDS |
| AACTACTAATGTCAGCTTGA+AGG | 0.417690 | 1.3:+57371983 | MS.gene44008:CDS |
| TTTCTAACTGTTTAAATTCA+GGG | 0.425655 | 1.3:-57371962 | None:intergenic |
| GGCTGAGGATTACATATGTC+TGG | 0.425884 | 1.3:+57373331 | MS.gene44008:CDS |
| GGGCCAGGAATGTGATGTAT+AGG | 0.440229 | 1.3:-57373009 | None:intergenic |
| AAGCTTAAAATTTCCATCAC+TGG | 0.443314 | 1.3:+57371478 | MS.gene44008:CDS |
| ATACATAATAACAGAATGAT+TGG | 0.454190 | 1.3:-57371728 | None:intergenic |
| TTCGGAATTGAGTGCCGCAT+TGG | 0.455787 | 1.3:+57372193 | MS.gene44008:CDS |
| TGCCGCTGATATGGGTGGAA+TGG | 0.455880 | 1.3:+57371693 | MS.gene44008:CDS |
| TTCATTGATGAGTGTGTTGA+AGG | 0.460492 | 1.3:+57372477 | MS.gene44008:CDS |
| CTAGGATTAATGGCATTAAG+AGG | 0.466035 | 1.3:+57371788 | MS.gene44008:CDS |
| TTACGACCACGAACACCCTC+TGG | 0.466075 | 1.3:-57373030 | None:intergenic |
| CCACGAACACCCTCTGGGCC+AGG | 0.469580 | 1.3:-57373024 | None:intergenic |
| GGTCCAATTAGGCTCACTTC+GGG | 0.470769 | 1.3:+57373440 | MS.gene44008:CDS |
| TCGGAATTGAGTGCCGCATT+GGG | 0.470875 | 1.3:+57372194 | MS.gene44008:CDS |
| TTATGCAGAATGGGAAGTAC+TGG | 0.471217 | 1.3:+57371391 | None:intergenic |
| CTCTCTCTCAAGATTCTCAT+AGG | 0.472504 | 1.3:-57371437 | None:intergenic |
| ACTCCTATACATCACATTCC+TGG | 0.476449 | 1.3:+57373006 | MS.gene44008:CDS |
| ACCCAAGCACCGGTCCAATT+AGG | 0.477394 | 1.3:+57373429 | MS.gene44008:CDS |
| AAATTTCCATCACTGGTGCT+GGG | 0.477839 | 1.3:+57371485 | MS.gene44008:CDS |
| GCCGCTGATATGGGTGGAAT+GGG | 0.481030 | 1.3:+57371694 | MS.gene44008:CDS |
| CCTGGCCCAGAGGGTGTTCG+TGG | 0.486762 | 1.3:+57373024 | MS.gene44008:CDS |
| GATTAAGGAACAACTTGAAA+AGG | 0.491126 | 1.3:+57373353 | MS.gene44008:CDS |
| AAATTTGAGATGTGGGGAGA+TGG | 0.493691 | 1.3:+57372432 | MS.gene44008:CDS |
| GGTCATGGATAACTGCTTAA+CGG | 0.498357 | 1.3:+57371639 | MS.gene44008:CDS |
| TAAATCCGATTTCCGCGAGC+CGG | 0.501210 | 1.3:+57372901 | MS.gene44008:CDS |
| TACAGACAAATTTGAGATGT+GGG | 0.508195 | 1.3:+57372425 | MS.gene44008:CDS |
| GGCTCCAACAATGAAGTTGA+AGG | 0.508928 | 1.3:+57373089 | MS.gene44008:CDS |
| ATTACATTATTGCTTCTGAC+TGG | 0.512162 | 1.3:+57371554 | MS.gene44008:CDS |
| CGGTCCAATTAGGCTCACTT+CGG | 0.527001 | 1.3:+57373439 | MS.gene44008:CDS |
| GCTCAAGGTCTTGATACATC+AGG | 0.527626 | 1.3:+57373381 | MS.gene44008:CDS |
| ATACCTTTCCATGTTCCAAA+AGG | 0.529802 | 1.3:-57372238 | None:intergenic |
| AATCGCGAACAAACCTCAGC+AGG | 0.536092 | 1.3:-57372020 | None:intergenic |
| TAATAAAAGAGAAACTTGGC+TGG | 0.537272 | 1.3:+57373067 | MS.gene44008:CDS |
| TGCTTTGTCATACAGGTGGA+AGG | 0.539745 | 1.3:+57372361 | MS.gene44008:intron |
| CAGCGGCAAGATTGAAAACA+TGG | 0.540286 | 1.3:-57371678 | None:intergenic |
| AATTTCCATCACTGGTGCTG+GGG | 0.543928 | 1.3:+57371486 | MS.gene44008:CDS |
| TCTTGTTGATCTCAGGGTCA+TGG | 0.544557 | 1.3:+57371624 | MS.gene44008:CDS |
| ATTCCATCTTGTTGATCTCA+GGG | 0.549458 | 1.3:+57371618 | MS.gene44008:CDS |
| TTCAACACACTCATCAATGA+AGG | 0.550166 | 1.3:-57372475 | None:intergenic |
| GTTTAGCCACAAGATGCGTA+TGG | 0.550376 | 1.3:+57372121 | MS.gene44008:intron |
| CTGCTTAACGGTTACTGAAG+GGG | 0.552535 | 1.3:+57371651 | MS.gene44008:CDS |
| GGCTCACTTCGGGCAGCAGA+CGG | 0.553347 | 1.3:+57373450 | MS.gene44008:CDS |
| TCAATATGATTGAAGCTGCT+AGG | 0.554345 | 1.3:+57371770 | MS.gene44008:CDS |
| CTTAGCTCGACGTCTCAAGA+AGG | 0.554683 | 1.3:+57371525 | MS.gene44008:CDS |
| CGAAGTGAGCCTAATTGGAC+CGG | 0.556358 | 1.3:-57373438 | None:intergenic |
| TGGTATTGTAGGATGGGCTG+AGG | 0.562487 | 1.3:+57373316 | MS.gene44008:intron |
| TCATACAGGTGGAAGGGAGA+AGG | 0.564053 | 1.3:+57372368 | MS.gene44008:intron |
| GTCTGATGCATGGCCTGCTG+AGG | 0.565899 | 1.3:+57372007 | MS.gene44008:CDS |
| AACTGCTTAACGGTTACTGA+AGG | 0.567633 | 1.3:+57371649 | MS.gene44008:CDS |
| ATTTCCATCACTGGTGCTGG+GGG | 0.574182 | 1.3:+57371487 | MS.gene44008:CDS |
| GGTCTTGATACATCAGGATA+CGG | 0.574577 | 1.3:+57373387 | MS.gene44008:CDS |
| CTTGAAAAGGAGAAGGCTCA+AGG | 0.578672 | 1.3:+57373366 | MS.gene44008:CDS |
| GCTAGAGAAGCTTGCAACAG+AGG | 0.582464 | 1.3:+57372144 | MS.gene44008:CDS |
| GAATTGAGTGCCGCATTGGG+AGG | 0.584070 | 1.3:+57372197 | MS.gene44008:CDS |
| ACACTAATAAAAGAGAAACT+TGG | 0.584612 | 1.3:+57373063 | MS.gene44008:CDS |
| AGTGTGTTGAAGGTGTACTT+AGG | 0.590072 | 1.3:+57372487 | MS.gene44008:CDS |
| AGGATACGGCTCATCAAAAG+TGG | 0.590362 | 1.3:+57373401 | MS.gene44008:CDS |
| AATCTTGCCGCTGATATGGG+TGG | 0.591075 | 1.3:+57371688 | MS.gene44008:CDS |
| CATCACATTCCTGGCCCAGA+GGG | 0.594287 | 1.3:+57373015 | MS.gene44008:CDS |
| TTCCAATATTTACCGGCTCG+CGG | 0.595261 | 1.3:-57372913 | None:intergenic |
| TGACCCTGAGATCAACAAGA+TGG | 0.595396 | 1.3:-57371621 | None:intergenic |
| TTTAGCCACAAGATGCGTAT+GGG | 0.596572 | 1.3:+57372122 | MS.gene44008:intron |
| ACTGCTTAACGGTTACTGAA+GGG | 0.598509 | 1.3:+57371650 | MS.gene44008:CDS |
| CTACAGACAAATTTGAGATG+TGG | 0.598727 | 1.3:+57372424 | MS.gene44008:CDS |
| AGCTCGACGTCTCAAGAAGG+AGG | 0.599816 | 1.3:+57371528 | MS.gene44008:CDS |
| AATAAAAGAGAAACTTGGCT+GGG | 0.602593 | 1.3:+57373068 | MS.gene44008:CDS |
| GCTTTGTCATACAGGTGGAA+GGG | 0.602719 | 1.3:+57372362 | MS.gene44008:intron |
| TACGACCACGAACACCCTCT+GGG | 0.602751 | 1.3:-57373029 | None:intergenic |
| GGAACAACTTGAAAAGGAGA+AGG | 0.603431 | 1.3:+57373359 | MS.gene44008:CDS |
| AGTGGTGCAAACCCAAGCAC+CGG | 0.611968 | 1.3:+57373419 | MS.gene44008:CDS |
| AAATATTGGAAGTGATGAGA+TGG | 0.614662 | 1.3:+57372925 | MS.gene44008:CDS |
| TCTAGCCCATACGCATCTTG+TGG | 0.616959 | 1.3:-57372127 | None:intergenic |
| GCTTGAAGGAGTCTGATGCA+TGG | 0.646402 | 1.3:+57371997 | MS.gene44008:CDS |
| GCCCATTCCACCCATATCAG+CGG | 0.647473 | 1.3:-57371695 | None:intergenic |
| GCTCGACGTCTCAAGAAGGA+GGG | 0.652896 | 1.3:+57371529 | MS.gene44008:CDS |
| ACAGACAAATTTGAGATGTG+GGG | 0.667327 | 1.3:+57372426 | MS.gene44008:CDS |
| ACATCACATTCCTGGCCCAG+AGG | 0.671457 | 1.3:+57373014 | MS.gene44008:CDS |
| AGGGTAGATACAAGCACTTG+AGG | 0.678133 | 1.3:-57371943 | None:intergenic |
| TGTTATGGAACCTCCCAATG+CGG | 0.724863 | 1.3:-57372207 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGTAGATTTTTTAATTT+TGG | + | chr1.3:57372312-57372331 | MS.gene44008:intron | 10.0% |
| !!! | TAATAAGTTTTTATCCAATT+TGG | + | chr1.3:57373145-57373164 | MS.gene44008:intron | 15.0% |
| !! | ATACATAATAACAGAATGAT+TGG | - | chr1.3:57371731-57371750 | None:intergenic | 20.0% |
| !! | ATTCATTAAAGTCAAACAAT+AGG | - | chr1.3:57373254-57373273 | None:intergenic | 20.0% |
| !! | GACTTTAATGAATATTCAAA+GGG | + | chr1.3:57373261-57373280 | MS.gene44008:intron | 20.0% |
| !! | TGACTTTAATGAATATTCAA+AGG | + | chr1.3:57373260-57373279 | MS.gene44008:intron | 20.0% |
| !! | TTTCTAACTGTTTAAATTCA+GGG | - | chr1.3:57371965-57371984 | None:intergenic | 20.0% |
| !!! | AATCTACTAATTTGCTTATT+CGG | - | chr1.3:57372303-57372322 | None:intergenic | 20.0% |
| !!! | ATAATTTTAGTATCCGTAAT+TGG | + | chr1.3:57372768-57372787 | MS.gene44008:intron | 20.0% |
| !!! | GAATTATAATTTTGAGCTTA+TGG | + | chr1.3:57372582-57372601 | MS.gene44008:intron | 20.0% |
| !!! | TGGTTCTTTATTTTTACATT+AGG | + | chr1.3:57372066-57372085 | MS.gene44008:intron | 20.0% |
| !!! | TTTATTTTTACATTAGGCTT+GGG | + | chr1.3:57372072-57372091 | MS.gene44008:intron | 20.0% |
| ! | AAAAAACACATGAATAAAGC+TGG | - | chr1.3:57372545-57372564 | None:intergenic | 25.0% |
| ! | ACAAATATTTGTTCGGTTAT+AGG | - | chr1.3:57371842-57371861 | None:intergenic | 25.0% |
| ! | ACACTAATAAAAGAGAAACT+TGG | + | chr1.3:57373063-57373082 | MS.gene44008:CDS | 25.0% |
| ! | ACATGAAAAGTTTGGTTAAA+TGG | - | chr1.3:57372632-57372651 | None:intergenic | 25.0% |
| ! | GTTTCTAACTGTTTAAATTC+AGG | - | chr1.3:57371966-57371985 | None:intergenic | 25.0% |
| ! | TATCTAAATTCTGGTATTGT+AGG | + | chr1.3:57373305-57373324 | MS.gene44008:intron | 25.0% |
| ! | TTAAAGTCAAACAATAGGAA+AGG | - | chr1.3:57373249-57373268 | None:intergenic | 25.0% |
| ! | TTATTAAGACACAAGAAAGA+AGG | - | chr1.3:57373131-57373150 | None:intergenic | 25.0% |
| !! | GAAATTTTAAGCTTTTCTGA+TGG | - | chr1.3:57371472-57371491 | None:intergenic | 25.0% |
| !! | TATCTTGTACATCATGTTTT+TGG | + | chr1.3:57371815-57371834 | MS.gene44008:intron | 25.0% |
| !!! | CTTTATTTTTACATTAGGCT+TGG | + | chr1.3:57372071-57372090 | MS.gene44008:intron | 25.0% |
| !!! | GAAAGTGTAATGGAATTTTT+AGG | + | chr1.3:57373186-57373205 | MS.gene44008:intron | 25.0% |
| AAATATTGGAAGTGATGAGA+TGG | + | chr1.3:57372925-57372944 | MS.gene44008:CDS | 30.0% | |
| AAATGCATCAAACAACCAAA+AGG | - | chr1.3:57372046-57372065 | None:intergenic | 30.0% | |
| AAATTCTGGTATTGTAGGAT+GGG | + | chr1.3:57373310-57373329 | MS.gene44008:intron | 30.0% | |
| AAGCAACAAACTCATTACAT+CGG | - | chr1.3:57372346-57372365 | None:intergenic | 30.0% | |
| AAGCACTACAACAAAGATTT+CGG | + | chr1.3:57372175-57372194 | MS.gene44008:CDS | 30.0% | |
| AAGCTTAAAATTTCCATCAC+TGG | + | chr1.3:57371478-57371497 | MS.gene44008:CDS | 30.0% | |
| AATAAAAGAGAAACTTGGCT+GGG | + | chr1.3:57373068-57373087 | MS.gene44008:CDS | 30.0% | |
| ATTACATTATTGCTTCTGAC+TGG | + | chr1.3:57371554-57371573 | MS.gene44008:CDS | 30.0% | |
| CAAAAGGACCATATATGTTA+TGG | - | chr1.3:57372225-57372244 | None:intergenic | 30.0% | |
| CAGCATCACAAATATTTGTT+CGG | - | chr1.3:57371849-57371868 | None:intergenic | 30.0% | |
| GATTAAGGAACAACTTGAAA+AGG | + | chr1.3:57373353-57373372 | MS.gene44008:CDS | 30.0% | |
| GATTACATATGTCTGGATTA+AGG | + | chr1.3:57373338-57373357 | MS.gene44008:CDS | 30.0% | |
| TAAATTCTGGTATTGTAGGA+TGG | + | chr1.3:57373309-57373328 | MS.gene44008:intron | 30.0% | |
| TAATAAAAGAGAAACTTGGC+TGG | + | chr1.3:57373067-57373086 | MS.gene44008:CDS | 30.0% | |
| TATACCTTCAACTTCATTGT+TGG | - | chr1.3:57373096-57373115 | None:intergenic | 30.0% | |
| TCATCACTTCCAATATTTAC+CGG | - | chr1.3:57372923-57372942 | None:intergenic | 30.0% | |
| TGCATTAAATGACATTGAGA+GGG | + | chr1.3:57372731-57372750 | MS.gene44008:intron | 30.0% | |
| TTACAGCAGTATCTAAATTC+TGG | + | chr1.3:57373296-57373315 | MS.gene44008:intron | 30.0% | |
| TTGCATTAAATGACATTGAG+AGG | + | chr1.3:57372730-57372749 | MS.gene44008:intron | 30.0% | |
| TTTAGTATCCGTAATTGGTT+GGG | + | chr1.3:57372773-57372792 | MS.gene44008:intron | 30.0% | |
| ! | AGTACTGGAAAAACTAACTA+TGG | + | chr1.3:57371406-57371425 | MS.gene44008:CDS | 30.0% |
| ! | CATAACATATATGGTCCTTT+TGG | + | chr1.3:57372223-57372242 | MS.gene44008:CDS | 30.0% |
| ! | TACAGACAAATTTGAGATGT+GGG | + | chr1.3:57372425-57372444 | MS.gene44008:CDS | 30.0% |
| ! | TCTTCTTTCAGAAAGTGTAA+TGG | + | chr1.3:57373176-57373195 | MS.gene44008:intron | 30.0% |
| ! | TTTGGTTGTTTGATGCATTT+TGG | + | chr1.3:57372046-57372065 | MS.gene44008:intron | 30.0% |
| ! | TTTTAGTATCCGTAATTGGT+TGG | + | chr1.3:57372772-57372791 | MS.gene44008:intron | 30.0% |
| !!! | AAGGACACATTTTTTGCAAT+TGG | - | chr1.3:57371907-57371926 | None:intergenic | 30.0% |
| AACAACAGACCAAATTGTCA+GGG | - | chr1.3:57372867-57372886 | None:intergenic | 35.0% | |
| AACTACTAATGTCAGCTTGA+AGG | + | chr1.3:57371983-57372002 | MS.gene44008:CDS | 35.0% | |
| AATTCCATCTTGTTGATCTC+AGG | + | chr1.3:57371617-57371636 | MS.gene44008:CDS | 35.0% | |
| AGGCATAAAAGAACCTGAAA+AGG | - | chr1.3:57371926-57371945 | None:intergenic | 35.0% | |
| ATACCTTTCCATGTTCCAAA+AGG | - | chr1.3:57372241-57372260 | None:intergenic | 35.0% | |
| ATTCCATCTTGTTGATCTCA+GGG | + | chr1.3:57371618-57371637 | MS.gene44008:CDS | 35.0% | |
| ATTGAAGCTGCTAGGATTAA+TGG | + | chr1.3:57371778-57371797 | MS.gene44008:CDS | 35.0% | |
| CAGCTCAAACATGAAAAGTT+TGG | - | chr1.3:57372640-57372659 | None:intergenic | 35.0% | |
| CTAGGATTAATGGCATTAAG+AGG | + | chr1.3:57371788-57371807 | MS.gene44008:CDS | 35.0% | |
| TAACAACAGACCAAATTGTC+AGG | - | chr1.3:57372868-57372887 | None:intergenic | 35.0% | |
| TAAGACACAAGAAAGAAGGA+AGG | - | chr1.3:57373127-57373146 | None:intergenic | 35.0% | |
| TATGATAAGCCCTGACAATT+TGG | + | chr1.3:57372855-57372874 | MS.gene44008:intron | 35.0% | |
| TCAATATGATTGAAGCTGCT+AGG | + | chr1.3:57371770-57371789 | MS.gene44008:CDS | 35.0% | |
| TCATGTTTGAGCTGTTCTAA+GGG | + | chr1.3:57372646-57372665 | MS.gene44008:intron | 35.0% | |
| TTCAACACACTCATCAATGA+AGG | - | chr1.3:57372478-57372497 | None:intergenic | 35.0% | |
| TTCATGTTTGAGCTGTTCTA+AGG | + | chr1.3:57372645-57372664 | MS.gene44008:intron | 35.0% | |
| TTCATTGATGAGTGTGTTGA+AGG | + | chr1.3:57372477-57372496 | MS.gene44008:CDS | 35.0% | |
| TTGGGATAGGGAAAATGATA+CGG | + | chr1.3:57372791-57372810 | MS.gene44008:intron | 35.0% | |
| ! | ACAGACAAATTTGAGATGTG+GGG | + | chr1.3:57372426-57372445 | MS.gene44008:CDS | 35.0% |
| ! | CACTTTCTGAAAGAAGATGA+AGG | - | chr1.3:57373173-57373192 | None:intergenic | 35.0% |
| ! | CTACAGACAAATTTGAGATG+TGG | + | chr1.3:57372424-57372443 | MS.gene44008:CDS | 35.0% |
| ! | GCAAAAAATGTGTCCTTTTC+AGG | + | chr1.3:57371910-57371929 | MS.gene44008:intron | 35.0% |
| !! | AGTTTGTTGCTTTGTCATAC+AGG | + | chr1.3:57372354-57372373 | MS.gene44008:intron | 35.0% |
| !!! | TATATGGTCCTTTTGGAACA+TGG | + | chr1.3:57372230-57372249 | MS.gene44008:CDS | 35.0% |
| AAAATTTCCATCACTGGTGC+TGG | + | chr1.3:57371484-57371503 | MS.gene44008:CDS | 40.0% | |
| AAATTTCCATCACTGGTGCT+GGG | + | chr1.3:57371485-57371504 | MS.gene44008:CDS | 40.0% | |
| AACTGCTTAACGGTTACTGA+AGG | + | chr1.3:57371649-57371668 | MS.gene44008:CDS | 40.0% | |
| ACTCCTATACATCACATTCC+TGG | + | chr1.3:57373006-57373025 | MS.gene44008:CDS | 40.0% | |
| ACTGCTTAACGGTTACTGAA+GGG | + | chr1.3:57371650-57371669 | MS.gene44008:CDS | 40.0% | |
| AGAAGATGAAGGAGCCAAAT+TGG | - | chr1.3:57373162-57373181 | None:intergenic | 40.0% | |
| ATCCGTAATTGGTTGGGATA+GGG | + | chr1.3:57372779-57372798 | MS.gene44008:intron | 40.0% | |
| CTCTCTCTCAAGATTCTCAT+AGG | - | chr1.3:57371440-57371459 | None:intergenic | 40.0% | |
| GAAAAATGAGCACATGACTG+AGG | + | chr1.3:57371579-57371598 | MS.gene44008:CDS | 40.0% | |
| GGAACAACTTGAAAAGGAGA+AGG | + | chr1.3:57373359-57373378 | MS.gene44008:CDS | 40.0% | |
| GGGAGGTTCCATAACATATA+TGG | + | chr1.3:57372214-57372233 | MS.gene44008:CDS | 40.0% | |
| GGTCATGGATAACTGCTTAA+CGG | + | chr1.3:57371639-57371658 | MS.gene44008:CDS | 40.0% | |
| GGTCTTGATACATCAGGATA+CGG | + | chr1.3:57373387-57373406 | MS.gene44008:CDS | 40.0% | |
| TATCCGTAATTGGTTGGGAT+AGG | + | chr1.3:57372778-57372797 | MS.gene44008:intron | 40.0% | |
| TCTTGGCTGATTGTTTGGTT+TGG | + | chr1.3:57372514-57372533 | MS.gene44008:intron | 40.0% | |
| TTCAATCTTGCCGCTGATAT+GGG | + | chr1.3:57371685-57371704 | MS.gene44008:CDS | 40.0% | |
| TTCCCTATCCCAACCAATTA+CGG | - | chr1.3:57372784-57372803 | None:intergenic | 40.0% | |
| TTTAGCCACAAGATGCGTAT+GGG | + | chr1.3:57372122-57372141 | MS.gene44008:intron | 40.0% | |
| TTTCAATCTTGCCGCTGATA+TGG | + | chr1.3:57371684-57371703 | MS.gene44008:CDS | 40.0% | |
| ! | AAATTTGAGATGTGGGGAGA+TGG | + | chr1.3:57372432-57372451 | MS.gene44008:CDS | 40.0% |
| ! | AGTGTGTTGAAGGTGTACTT+AGG | + | chr1.3:57372487-57372506 | MS.gene44008:CDS | 40.0% |
| ! | TGTTGAAGGTGTACTTAGGT+AGG | + | chr1.3:57372491-57372510 | MS.gene44008:intron | 40.0% |
| ! | TGTTGATTGAGTGAGCTAAC+TGG | - | chr1.3:57372707-57372726 | None:intergenic | 40.0% |
| !! | TTGTTGCTTTGTCATACAGG+TGG | + | chr1.3:57372357-57372376 | MS.gene44008:intron | 40.0% |
| !!! | TGAGATCGTTCTTGGTTTTG+AGG | + | chr1.3:57372975-57372994 | MS.gene44008:intron | 40.0% |
| AGGATACGGCTCATCAAAAG+TGG | + | chr1.3:57373401-57373420 | MS.gene44008:CDS | 45.0% | |
| AGGGTAGATACAAGCACTTG+AGG | - | chr1.3:57371946-57371965 | None:intergenic | 45.0% | |
| AGGTGTACTTAGGTAGGTCT+TGG | + | chr1.3:57372497-57372516 | MS.gene44008:intron | 45.0% | |
| ATCTTGAGAGAGAGCCTTAC+TGG | + | chr1.3:57371446-57371465 | MS.gene44008:CDS | 45.0% | |
| CAGCGGCAAGATTGAAAACA+TGG | - | chr1.3:57371681-57371700 | None:intergenic | 45.0% | |
| CTGCTTAACGGTTACTGAAG+GGG | + | chr1.3:57371651-57371670 | MS.gene44008:CDS | 45.0% | |
| CTTGAAAAGGAGAAGGCTCA+AGG | + | chr1.3:57373366-57373385 | MS.gene44008:CDS | 45.0% | |
| GCAACTCAGCATGAATGAGA+TGG | + | chr1.3:57372951-57372970 | MS.gene44008:intron | 45.0% | |
| GCTCAAGGTCTTGATACATC+AGG | + | chr1.3:57373381-57373400 | MS.gene44008:CDS | 45.0% | |
| GCTTTGTCATACAGGTGGAA+GGG | + | chr1.3:57372362-57372381 | MS.gene44008:intron | 45.0% | |
| GGCTCCAACAATGAAGTTGA+AGG | + | chr1.3:57373089-57373108 | MS.gene44008:CDS | 45.0% | |
| GGCTGAGGATTACATATGTC+TGG | + | chr1.3:57373331-57373350 | MS.gene44008:CDS | 45.0% | |
| GTAGGTCTTGGCTGATTGTT+TGG | + | chr1.3:57372509-57372528 | MS.gene44008:intron | 45.0% | |
| GTTTAGCCACAAGATGCGTA+TGG | + | chr1.3:57372121-57372140 | MS.gene44008:intron | 45.0% | |
| TCTTGTTGATCTCAGGGTCA+TGG | + | chr1.3:57371624-57371643 | MS.gene44008:CDS | 45.0% | |
| TGACCCTGAGATCAACAAGA+TGG | - | chr1.3:57371624-57371643 | None:intergenic | 45.0% | |
| TGCTTTGTCATACAGGTGGA+AGG | + | chr1.3:57372361-57372380 | MS.gene44008:intron | 45.0% | |
| TGTTATGGAACCTCCCAATG+CGG | - | chr1.3:57372210-57372229 | None:intergenic | 45.0% | |
| ! | AATTTCCATCACTGGTGCTG+GGG | + | chr1.3:57371486-57371505 | MS.gene44008:CDS | 45.0% |
| ! | AGCTTTTCTGATGGCCAGTA+AGG | - | chr1.3:57371463-57371482 | None:intergenic | 45.0% |
| !! | GGTTTGTTCGCGATTCCTTT+TGG | + | chr1.3:57372028-57372047 | MS.gene44008:intron | 45.0% |
| !! | TTCCAATATTTACCGGCTCG+CGG | - | chr1.3:57372916-57372935 | None:intergenic | 45.0% |
| !!! | GGTCCTTTTGGAACATGGAA+AGG | + | chr1.3:57372235-57372254 | MS.gene44008:CDS | 45.0% |
| AATCGCGAACAAACCTCAGC+AGG | - | chr1.3:57372023-57372042 | None:intergenic | 50.0% | |
| AATCTTGCCGCTGATATGGG+TGG | + | chr1.3:57371688-57371707 | MS.gene44008:CDS | 50.0% | |
| CGAAGTGAGCCTAATTGGAC+CGG | - | chr1.3:57373441-57373460 | None:intergenic | 50.0% | |
| CGGTCCAATTAGGCTCACTT+CGG | + | chr1.3:57373439-57373458 | MS.gene44008:CDS | 50.0% | |
| CTTAGCTCGACGTCTCAAGA+AGG | + | chr1.3:57371525-57371544 | MS.gene44008:CDS | 50.0% | |
| GAGATGGCTGAGATCGTTCT+TGG | + | chr1.3:57372967-57372986 | MS.gene44008:intron | 50.0% | |
| GCTAGAGAAGCTTGCAACAG+AGG | + | chr1.3:57372144-57372163 | MS.gene44008:CDS | 50.0% | |
| GCTTGAAGGAGTCTGATGCA+TGG | + | chr1.3:57371997-57372016 | MS.gene44008:CDS | 50.0% | |
| GCTTTCCGACAAAAAGCAGC+AGG | - | chr1.3:57372396-57372415 | None:intergenic | 50.0% | |
| GGGCCAGGAATGTGATGTAT+AGG | - | chr1.3:57373012-57373031 | None:intergenic | 50.0% | |
| GGTCCAATTAGGCTCACTTC+GGG | + | chr1.3:57373440-57373459 | MS.gene44008:CDS | 50.0% | |
| TAAATCCGATTTCCGCGAGC+CGG | + | chr1.3:57372901-57372920 | MS.gene44008:CDS | 50.0% | |
| TCATACAGGTGGAAGGGAGA+AGG | + | chr1.3:57372368-57372387 | MS.gene44008:intron | 50.0% | |
| TCTAGCCCATACGCATCTTG+TGG | - | chr1.3:57372130-57372149 | None:intergenic | 50.0% | |
| TTCCGCGAGCCGGTAAATAT+TGG | + | chr1.3:57372911-57372930 | MS.gene44008:CDS | 50.0% | |
| ! | ATTTCCATCACTGGTGCTGG+GGG | + | chr1.3:57371487-57371506 | MS.gene44008:CDS | 50.0% |
| ! | TCGGAATTGAGTGCCGCATT+GGG | + | chr1.3:57372194-57372213 | MS.gene44008:CDS | 50.0% |
| ! | TTCGGAATTGAGTGCCGCAT+TGG | + | chr1.3:57372193-57372212 | MS.gene44008:CDS | 50.0% |
| !! | ATTTACCGGCTCGCGGAAAT+CGG | - | chr1.3:57372909-57372928 | None:intergenic | 50.0% |
| !! | TGGTATTGTAGGATGGGCTG+AGG | + | chr1.3:57373316-57373335 | MS.gene44008:intron | 50.0% |
| !!! | AGGCTCCTGCTGCTTTTTGT+CGG | + | chr1.3:57372388-57372407 | MS.gene44008:CDS | 50.0% |
| AAAACCCCCAGCACCAGTGA+TGG | - | chr1.3:57371494-57371513 | None:intergenic | 55.0% | |
| ACATCACATTCCTGGCCCAG+AGG | + | chr1.3:57373014-57373033 | MS.gene44008:CDS | 55.0% | |
| AGCCTAATTGGACCGGTGCT+TGG | - | chr1.3:57373434-57373453 | None:intergenic | 55.0% | |
| AGCTCGACGTCTCAAGAAGG+AGG | + | chr1.3:57371528-57371547 | MS.gene44008:CDS | 55.0% | |
| AGTGGTGCAAACCCAAGCAC+CGG | + | chr1.3:57373419-57373438 | MS.gene44008:CDS | 55.0% | |
| CATCACATTCCTGGCCCAGA+GGG | + | chr1.3:57373015-57373034 | MS.gene44008:CDS | 55.0% | |
| CTGCCCGAAGTGAGCCTAAT+TGG | - | chr1.3:57373446-57373465 | None:intergenic | 55.0% | |
| GCCCATTCCACCCATATCAG+CGG | - | chr1.3:57371698-57371717 | None:intergenic | 55.0% | |
| GCCGCTGATATGGGTGGAAT+GGG | + | chr1.3:57371694-57371713 | MS.gene44008:CDS | 55.0% | |
| GCCTAATTGGACCGGTGCTT+GGG | - | chr1.3:57373433-57373452 | None:intergenic | 55.0% | |
| GCTCGACGTCTCAAGAAGGA+GGG | + | chr1.3:57371529-57371548 | MS.gene44008:CDS | 55.0% | |
| TACGACCACGAACACCCTCT+GGG | - | chr1.3:57373032-57373051 | None:intergenic | 55.0% | |
| TGCCGCTGATATGGGTGGAA+TGG | + | chr1.3:57371693-57371712 | MS.gene44008:CDS | 55.0% | |
| TTACGACCACGAACACCCTC+TGG | - | chr1.3:57373033-57373052 | None:intergenic | 55.0% | |
| ! | GAATTGAGTGCCGCATTGGG+AGG | + | chr1.3:57372197-57372216 | MS.gene44008:CDS | 55.0% |
| !! | ACCCAAGCACCGGTCCAATT+AGG | + | chr1.3:57373429-57373448 | MS.gene44008:CDS | 55.0% |
| GTCTGATGCATGGCCTGCTG+AGG | + | chr1.3:57372007-57372026 | MS.gene44008:CDS | 60.0% | |
| GGCTCACTTCGGGCAGCAGA+CGG | + | chr1.3:57373450-57373469 | MS.gene44008:CDS | 65.0% | |
| CCACGAACACCCTCTGGGCC+AGG | - | chr1.3:57373027-57373046 | None:intergenic | 70.0% | |
| !! | CCTGGCCCAGAGGGTGTTCG+TGG | + | chr1.3:57373024-57373043 | MS.gene44008:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 57371400 | 57373488 | 57371400 | ID=MS.gene44008 |
| chr1.3 | mRNA | 57371400 | 57373488 | 57371400 | ID=MS.gene44008.t1;Parent=MS.gene44008 |
| chr1.3 | exon | 57371400 | 57371809 | 57371400 | ID=MS.gene44008.t1.exon1;Parent=MS.gene44008.t1 |
| chr1.3 | CDS | 57371400 | 57371809 | 57371400 | ID=cds.MS.gene44008.t1;Parent=MS.gene44008.t1 |
| chr1.3 | exon | 57371932 | 57372028 | 57371932 | ID=MS.gene44008.t1.exon2;Parent=MS.gene44008.t1 |
| chr1.3 | CDS | 57371932 | 57372028 | 57371932 | ID=cds.MS.gene44008.t1;Parent=MS.gene44008.t1 |
| chr1.3 | exon | 57372127 | 57372256 | 57372127 | ID=MS.gene44008.t1.exon3;Parent=MS.gene44008.t1 |
| chr1.3 | CDS | 57372127 | 57372256 | 57372127 | ID=cds.MS.gene44008.t1;Parent=MS.gene44008.t1 |
| chr1.3 | exon | 57372376 | 57372508 | 57372376 | ID=MS.gene44008.t1.exon4;Parent=MS.gene44008.t1 |
| chr1.3 | CDS | 57372376 | 57372508 | 57372376 | ID=cds.MS.gene44008.t1;Parent=MS.gene44008.t1 |
| chr1.3 | exon | 57372895 | 57372946 | 57372895 | ID=MS.gene44008.t1.exon5;Parent=MS.gene44008.t1 |
| chr1.3 | CDS | 57372895 | 57372946 | 57372895 | ID=cds.MS.gene44008.t1;Parent=MS.gene44008.t1 |
| chr1.3 | exon | 57372979 | 57373110 | 57372979 | ID=MS.gene44008.t1.exon6;Parent=MS.gene44008.t1 |
| chr1.3 | CDS | 57372979 | 57373110 | 57372979 | ID=cds.MS.gene44008.t1;Parent=MS.gene44008.t1 |
| chr1.3 | exon | 57373327 | 57373488 | 57373327 | ID=MS.gene44008.t1.exon7;Parent=MS.gene44008.t1 |
| chr1.3 | CDS | 57373327 | 57373488 | 57373327 | ID=cds.MS.gene44008.t1;Parent=MS.gene44008.t1 |
| Gene Sequence |
| Protein sequence |
