Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45771.t1 | XP_013445079.1 | 95.8 | 72 | 3 | 0 | 1 | 72 | 1 | 72 | 2.10E-30 | 142.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45771.t1 | B7FMA4 | 95.8 | 72 | 3 | 0 | 1 | 72 | 1 | 72 | 1.5e-30 | 142.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene45771 | 0.800463 | 1.42E-48 | -1.69E-46 |
| MS.gene049260 | MS.gene45771 | 0.80166 | 8.11E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene45771 | 0.800107 | 1.68E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene45771 | 0.80503 | 1.63E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene45771 | 0.841423 | 4.80E-58 | -1.69E-46 |
| MS.gene049910 | MS.gene45771 | 0.808466 | 3.05E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene45771 | 0.806076 | 9.80E-50 | -1.69E-46 |
| MS.gene050168 | MS.gene45771 | 0.804625 | 1.97E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene45771 | 0.823366 | 1.44E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene45771 | 0.822795 | 1.96E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene45771 | 0.842384 | 2.67E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene45771 | 0.816958 | 4.23E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene45771 | 0.802345 | 5.86E-49 | -1.69E-46 |
| MS.gene052255 | MS.gene45771 | 0.821744 | 3.43E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene45771 | 0.803255 | 3.80E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene45771 | 0.822891 | 1.86E-53 | -1.69E-46 |
| MS.gene053184 | MS.gene45771 | 0.803216 | 3.88E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene45771 | 0.873975 | 9.69E-68 | -1.69E-46 |
| MS.gene054010 | MS.gene45771 | 0.816209 | 6.22E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene45771 | 0.819912 | 9.05E-53 | -1.69E-46 |
| MS.gene054012 | MS.gene45771 | 0.815793 | 7.71E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene45771 | 0.812371 | 4.38E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene45771 | 0.815055 | 1.12E-51 | -1.69E-46 |
| MS.gene054184 | MS.gene45771 | 0.817136 | 3.86E-52 | -1.69E-46 |
| MS.gene054185 | MS.gene45771 | 0.823298 | 1.49E-53 | -1.69E-46 |
| MS.gene054214 | MS.gene45771 | 0.806261 | 8.96E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene45771 | 0.815652 | 8.29E-52 | -1.69E-46 |
| MS.gene054713 | MS.gene45771 | 0.805843 | 1.10E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene45771 | 0.841048 | 6.02E-58 | -1.69E-46 |
| MS.gene055390 | MS.gene45771 | 0.815585 | 8.57E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene45771 | 0.835726 | 1.42E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene45771 | 0.820526 | 6.55E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene45771 | 0.840541 | 8.17E-58 | -1.69E-46 |
| MS.gene056191 | MS.gene45771 | 0.859308 | 4.53E-63 | -1.69E-46 |
| MS.gene056931 | MS.gene45771 | 0.805747 | 1.15E-49 | -1.69E-46 |
| MS.gene056933 | MS.gene45771 | 0.806669 | 7.35E-50 | -1.69E-46 |
| MS.gene057121 | MS.gene45771 | 0.829687 | 4.48E-55 | -1.69E-46 |
| MS.gene057245 | MS.gene45771 | 0.805753 | 1.15E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene45771 | 0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene45771 | 0.803227 | 3.85E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene45771 | 0.834472 | 2.94E-56 | -1.69E-46 |
| MS.gene057750 | MS.gene45771 | 0.800168 | 1.64E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene45771 | 0.843234 | 1.59E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene45771 | 0.826773 | 2.26E-54 | -1.69E-46 |
| MS.gene058168 | MS.gene45771 | 0.807316 | 5.37E-50 | -1.69E-46 |
| MS.gene058667 | MS.gene45771 | 0.816453 | 5.49E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene45771 | 0.808315 | 3.29E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene45771 | 0.842611 | 2.33E-58 | -1.69E-46 |
| MS.gene059124 | MS.gene45771 | 0.832788 | 7.74E-56 | -1.69E-46 |
| MS.gene059294 | MS.gene45771 | 0.81948 | 1.14E-52 | -1.69E-46 |
| MS.gene059421 | MS.gene45771 | 0.802233 | 6.18E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene45771 | 0.810512 | 1.11E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene45771 | 0.826717 | 2.33E-54 | -1.69E-46 |
| MS.gene059894 | MS.gene45771 | 0.813352 | 2.67E-51 | -1.69E-46 |
| MS.gene059974 | MS.gene45771 | 0.80251 | 5.42E-49 | -1.69E-46 |
| MS.gene060005 | MS.gene45771 | 0.818569 | 1.83E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene45771 | 0.827323 | 1.67E-54 | -1.69E-46 |
| MS.gene060559 | MS.gene45771 | 0.821718 | 3.48E-53 | -1.69E-46 |
| MS.gene060994 | MS.gene45771 | 0.812098 | 5.03E-51 | -1.69E-46 |
| MS.gene061000 | MS.gene45771 | 0.807438 | 5.05E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene45771 | 0.844121 | 9.20E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45771.t1 | MTR_8g037933 | 91.848 | 184 | 9 | 1 | 1 | 184 | 1 | 178 | 2.34e-111 | 316 |
| MS.gene45771.t1 | MTR_0695s0010 | 86.111 | 36 | 5 | 0 | 35 | 70 | 18 | 53 | 5.43e-16 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 58 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCATTATGTCCTTCT+AGG | 0.088496 | 8.3:-58717115 | None:intergenic |
| TTTGGAATAGGTTTGTAAAT+TGG | 0.202275 | 8.3:-58717500 | None:intergenic |
| CTTTGGAATAGGCTTGTAAA+TGG | 0.212935 | 8.3:-58717309 | None:intergenic |
| TTTGGAATAGGCTTGTAAAT+TGG | 0.232414 | 8.3:-58717356 | None:intergenic |
| TTTGGAATAGGCTTGTAAAT+TGG | 0.232414 | 8.3:-58717404 | None:intergenic |
| TTTGGAATAGGCTTGTAAAT+TGG | 0.232414 | 8.3:-58717452 | None:intergenic |
| GGAATTGGTTTCTTGAATAT+TGG | 0.237384 | 8.3:-58717197 | None:intergenic |
| TTATAGATTGGAACGTATTT+TGG | 0.246929 | 8.3:-58717266 | None:intergenic |
| TTTGGTGTAGGTTTGTAAAT+TGG | 0.267204 | 8.3:-58717248 | None:intergenic |
| ATTGGAACAGGCTTGTAAAT+TGG | 0.276520 | 8.3:-58717386 | None:intergenic |
| ATTGGAACAGGCTTGTAAAT+TGG | 0.276520 | 8.3:-58717434 | None:intergenic |
| ATTGGAACAGGCTTGTAAAT+TGG | 0.276520 | 8.3:-58717482 | None:intergenic |
| TTGTGAATAGGGTTGTAAAA+TGG | 0.314774 | 8.3:-58717218 | None:intergenic |
| ATTGGAATTACCTTTGGAAT+AGG | 0.316743 | 8.3:-58717368 | None:intergenic |
| ATTGGAATTACCTTTGGAAT+AGG | 0.316743 | 8.3:-58717416 | None:intergenic |
| ATTGGAATTACCTTTGGAAT+AGG | 0.316743 | 8.3:-58717464 | None:intergenic |
| ATTGGAATGTCTTTGTGAAT+AGG | 0.325208 | 8.3:-58717230 | None:intergenic |
| TTGGAATGTCTTTGTGAATA+GGG | 0.326122 | 8.3:-58717229 | None:intergenic |
| CAATATGCAAAGGCCACTTT+TGG | 0.329589 | 8.3:+58716238 | MS.gene45771:CDS |
| ATGGGAATTTCCTTTGGAAT+AGG | 0.348694 | 8.3:-58717512 | None:intergenic |
| ACTGGAATTACCTTTGGAAT+AGG | 0.360911 | 8.3:-58717320 | None:intergenic |
| ATTGGAACAGGCTTGTAAAC+TGG | 0.363527 | 8.3:-58717338 | None:intergenic |
| ATAGGCTTGTAAATGGGAAT+TGG | 0.370906 | 8.3:-58717302 | None:intergenic |
| CAAAAGTGGCCTTTGCATAT+TGG | 0.376190 | 8.3:-58716237 | None:intergenic |
| ATAGGGTTGTAAAATGGAAT+TGG | 0.379124 | 8.3:-58717212 | None:intergenic |
| TTTACAATGGGAATTTCCTT+TGG | 0.389183 | 8.3:-58717518 | None:intergenic |
| GTAGCAAGAAATGATCCTTC+AGG | 0.392442 | 8.3:+58716314 | MS.gene45771:CDS |
| ATAGGTTTGTAAATTGGAAC+AGG | 0.400844 | 8.3:-58717494 | None:intergenic |
| TTGTAAACTGGAATTACCTT+TGG | 0.413189 | 8.3:-58717326 | None:intergenic |
| TTGTAAATTGGAATTACCTT+TGG | 0.416670 | 8.3:-58717374 | None:intergenic |
| TTGTAAATTGGAATTACCTT+TGG | 0.416670 | 8.3:-58717422 | None:intergenic |
| TTGTAAATTGGAATTACCTT+TGG | 0.416670 | 8.3:-58717470 | None:intergenic |
| TAATGGATTGGCTTTACAAT+GGG | 0.425861 | 8.3:-58717530 | None:intergenic |
| ATAGGCTTGTAAATTGGAAC+AGG | 0.440807 | 8.3:-58717350 | None:intergenic |
| ATAGGCTTGTAAATTGGAAC+AGG | 0.440807 | 8.3:-58717398 | None:intergenic |
| ATAGGCTTGTAAATTGGAAC+AGG | 0.440807 | 8.3:-58717446 | None:intergenic |
| ATGGGAATTGGTTTGTGGAT+AGG | 0.448083 | 8.3:-58717290 | None:intergenic |
| GCTTCCCATCTGTGTTCACT+TGG | 0.449323 | 8.3:-58717064 | None:intergenic |
| GCATGATAATATTAATGGAT+TGG | 0.453668 | 8.3:-58717542 | None:intergenic |
| ACAACAAAGACAAACCTAGA+AGG | 0.456489 | 8.3:+58717101 | MS.gene45771:CDS |
| TTGTGGATAGGCTTATAGAT+TGG | 0.461177 | 8.3:-58717278 | None:intergenic |
| TGTAAATGGGAATTGGTTTG+TGG | 0.491139 | 8.3:-58717295 | None:intergenic |
| TTTGGAATAGGCTTGTAAAT+GGG | 0.493642 | 8.3:-58717308 | None:intergenic |
| GGAAACCAAGTGAACACAGA+TGG | 0.546430 | 8.3:+58717059 | MS.gene45771:intron |
| TTAATGGATTGGCTTTACAA+TGG | 0.550457 | 8.3:-58717531 | None:intergenic |
| CATCTAAAACACAAACTCAA+AGG | 0.559830 | 8.3:+58717158 | MS.gene45771:CDS |
| AATTTACAAACCTATTCCAA+AGG | 0.560996 | 8.3:+58717502 | MS.gene45771:CDS |
| CATTTACAAGCCTATTCCAA+AGG | 0.578514 | 8.3:+58717310 | MS.gene45771:CDS |
| GAAACCAAGTGAACACAGAT+GGG | 0.582541 | 8.3:+58717060 | MS.gene45771:CDS |
| GGAACCCAGAAGGCCAAAAG+TGG | 0.583318 | 8.3:-58716251 | None:intergenic |
| AATTTACAAGCCTATTCCAA+AGG | 0.584966 | 8.3:+58717358 | MS.gene45771:CDS |
| AATTTACAAGCCTATTCCAA+AGG | 0.584966 | 8.3:+58717406 | MS.gene45771:CDS |
| AATTTACAAGCCTATTCCAA+AGG | 0.584966 | 8.3:+58717454 | MS.gene45771:CDS |
| AAGGTGACAAGGAGCAACAA+AGG | 0.600910 | 8.3:-58716272 | None:intergenic |
| TAGCATAACAGAAGGTGACA+AGG | 0.606710 | 8.3:-58716283 | None:intergenic |
| GAGCAACAAAGGAACCCAGA+AGG | 0.618628 | 8.3:-58716261 | None:intergenic |
| GAAAAGCTTCCAATATGCAA+AGG | 0.633003 | 8.3:+58716228 | MS.gene45771:CDS |
| AACAGAAGTAGCATAACAGA+AGG | 0.639211 | 8.3:-58716291 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAATAAAATTTTATTTGA+AGG | + | chr8.3:58716686-58716705 | MS.gene45771:intron | 10.0% |
| !! | AAAAAAGAGAGAGAAATTTA+TGG | + | chr8.3:58716483-58716502 | MS.gene45771:intron | 20.0% |
| !! | AATGAAGAAGAAAAATTCAA+AGG | + | chr8.3:58717128-58717147 | MS.gene45771:CDS | 20.0% |
| !! | ACATTTATATTTCCCTTATT+TGG | + | chr8.3:58716459-58716478 | MS.gene45771:intron | 20.0% |
| ! | AATTTACAAACCTATTCCAA+AGG | + | chr8.3:58717502-58717521 | MS.gene45771:CDS | 25.0% |
| ! | ACCATTTAAACATGACTTTA+AGG | - | chr8.3:58716543-58716562 | None:intergenic | 25.0% |
| ! | AGTAGTACATATTCATAGAT+TGG | + | chr8.3:58716409-58716428 | MS.gene45771:intron | 25.0% |
| ! | GTAGTACATATTCATAGATT+GGG | + | chr8.3:58716410-58716429 | MS.gene45771:intron | 25.0% |
| ! | TCCTTAAAGTCATGTTTAAA+TGG | + | chr8.3:58716539-58716558 | MS.gene45771:intron | 25.0% |
| ! | TTACTCGATTTATAAACTCT+AGG | - | chr8.3:58717021-58717040 | None:intergenic | 25.0% |
| ! | TTGTAAATTGGAATTACCTT+TGG | - | chr8.3:58717377-58717396 | None:intergenic | 25.0% |
| !! | TTATAGATTGGAACGTATTT+TGG | - | chr8.3:58717269-58717288 | None:intergenic | 25.0% |
| !! | TTTGGAATAGGTTTGTAAAT+TGG | - | chr8.3:58717503-58717522 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTTACTCTTGGTT+TGG | + | chr8.3:58716435-58716454 | MS.gene45771:intron | 25.0% |
| !!! | CTCTCTTTTTTACCAAATAA+GGG | - | chr8.3:58716474-58716493 | None:intergenic | 25.0% |
| !!! | GTTTCTTGAATATTGGTTTT+TGG | - | chr8.3:58717193-58717212 | None:intergenic | 25.0% |
| !!! | TCTCTCTTTTTTACCAAATA+AGG | - | chr8.3:58716475-58716494 | None:intergenic | 25.0% |
| AAACAAAACAAACACACACT+TGG | + | chr8.3:58716980-58716999 | MS.gene45771:intron | 30.0% | |
| AATTTACAAGCCTATTCCAA+AGG | + | chr8.3:58717358-58717377 | MS.gene45771:CDS | 30.0% | |
| ACTATCATCATAATCACACA+AGG | - | chr8.3:58716587-58716606 | None:intergenic | 30.0% | |
| ATAGGGTTGTAAAATGGAAT+TGG | - | chr8.3:58717215-58717234 | None:intergenic | 30.0% | |
| ATAGGTTTGTAAATTGGAAC+AGG | - | chr8.3:58717497-58717516 | None:intergenic | 30.0% | |
| ATTGGAATGTCTTTGTGAAT+AGG | - | chr8.3:58717233-58717252 | None:intergenic | 30.0% | |
| TATTATACTCACAAACCTGA+AGG | - | chr8.3:58716332-58716351 | None:intergenic | 30.0% | |
| TTGGAATGTCTTTGTGAATA+GGG | - | chr8.3:58717232-58717251 | None:intergenic | 30.0% | |
| TTGTAAACTGGAATTACCTT+TGG | - | chr8.3:58717329-58717348 | None:intergenic | 30.0% | |
| TTGTGAATAGGGTTGTAAAA+TGG | - | chr8.3:58717221-58717240 | None:intergenic | 30.0% | |
| TTTACAATGGGAATTTCCTT+TGG | - | chr8.3:58717521-58717540 | None:intergenic | 30.0% | |
| ! | CATCTAAAACACAAACTCAA+AGG | + | chr8.3:58717158-58717177 | MS.gene45771:CDS | 30.0% |
| ! | GGAATTGGTTTCTTGAATAT+TGG | - | chr8.3:58717200-58717219 | None:intergenic | 30.0% |
| ! | TAATTTTGCATTTCTTGTGC+AGG | + | chr8.3:58717038-58717057 | MS.gene45771:intron | 30.0% |
| ! | TTTGGAATAGGCTTGTAAAT+GGG | - | chr8.3:58717311-58717330 | None:intergenic | 30.0% |
| ! | TTTGGAATAGGCTTGTAAAT+TGG | - | chr8.3:58717311-58717330 | None:intergenic | 30.0% |
| ! | TTTGGTGTAGGTTTGTAAAT+TGG | - | chr8.3:58717251-58717270 | None:intergenic | 30.0% |
| !! | ATTGGAATTACCTTTGGAAT+AGG | - | chr8.3:58717371-58717390 | None:intergenic | 30.0% |
| !! | TAATGGATTGGCTTTACAAT+GGG | - | chr8.3:58717533-58717552 | None:intergenic | 30.0% |
| !! | TTAATGGATTGGCTTTACAA+TGG | - | chr8.3:58717534-58717553 | None:intergenic | 30.0% |
| !!! | GGGTTATTTTTGTTTACTCT+TGG | + | chr8.3:58716430-58716449 | MS.gene45771:intron | 30.0% |
| AACAGAAGTAGCATAACAGA+AGG | - | chr8.3:58716294-58716313 | None:intergenic | 35.0% | |
| ACAACAAAGACAAACCTAGA+AGG | + | chr8.3:58717101-58717120 | MS.gene45771:CDS | 35.0% | |
| ATAGGCTTGTAAATGGGAAT+TGG | - | chr8.3:58717305-58717324 | None:intergenic | 35.0% | |
| ATAGGCTTGTAAATTGGAAC+AGG | - | chr8.3:58717353-58717372 | None:intergenic | 35.0% | |
| ATTGGAACAGGCTTGTAAAT+TGG | - | chr8.3:58717389-58717408 | None:intergenic | 35.0% | |
| CATTTACAAGCCTATTCCAA+AGG | + | chr8.3:58717310-58717329 | MS.gene45771:CDS | 35.0% | |
| CTTCTTCATTATGTCCTTCT+AGG | - | chr8.3:58717118-58717137 | None:intergenic | 35.0% | |
| GAAAAGCTTCCAATATGCAA+AGG | + | chr8.3:58716228-58716247 | MS.gene45771:CDS | 35.0% | |
| GGTTCAAGAAGAATTGAACT+CGG | + | chr8.3:58716822-58716841 | MS.gene45771:intron | 35.0% | |
| TTGTGGATAGGCTTATAGAT+TGG | - | chr8.3:58717281-58717300 | None:intergenic | 35.0% | |
| !! | ACTGGAATTACCTTTGGAAT+AGG | - | chr8.3:58717323-58717342 | None:intergenic | 35.0% |
| !! | ATGGGAATTTCCTTTGGAAT+AGG | - | chr8.3:58717515-58717534 | None:intergenic | 35.0% |
| !! | CTTTGGAATAGGCTTGTAAA+TGG | - | chr8.3:58717312-58717331 | None:intergenic | 35.0% |
| !! | TGTAAATGGGAATTGGTTTG+TGG | - | chr8.3:58717298-58717317 | None:intergenic | 35.0% |
| !!! | ATTGGAACGTATTTTGGTGT+AGG | - | chr8.3:58717263-58717282 | None:intergenic | 35.0% |
| ATTGGAACAGGCTTGTAAAC+TGG | - | chr8.3:58717341-58717360 | None:intergenic | 40.0% | |
| CAAAAGTGGCCTTTGCATAT+TGG | - | chr8.3:58716240-58716259 | None:intergenic | 40.0% | |
| GAAACCAAGTGAACACAGAT+GGG | + | chr8.3:58717060-58717079 | MS.gene45771:CDS | 40.0% | |
| GTAGCAAGAAATGATCCTTC+AGG | + | chr8.3:58716314-58716333 | MS.gene45771:CDS | 40.0% | |
| TAGCATAACAGAAGGTGACA+AGG | - | chr8.3:58716286-58716305 | None:intergenic | 40.0% | |
| !! | ATGGGAATTGGTTTGTGGAT+AGG | - | chr8.3:58717293-58717312 | None:intergenic | 40.0% |
| !! | CAATATGCAAAGGCCACTTT+TGG | + | chr8.3:58716238-58716257 | MS.gene45771:CDS | 40.0% |
| AAGGTGACAAGGAGCAACAA+AGG | - | chr8.3:58716275-58716294 | None:intergenic | 45.0% | |
| ACACACTTGGCCATTAAGCT+AGG | + | chr8.3:58716993-58717012 | MS.gene45771:intron | 45.0% | |
| ACTCTAGGTGCCTAGCTTAA+TGG | - | chr8.3:58717006-58717025 | None:intergenic | 45.0% | |
| CAAACCAATACACACGACAC+AGG | + | chr8.3:58716790-58716809 | MS.gene45771:intron | 45.0% | |
| GGAAACCAAGTGAACACAGA+TGG | + | chr8.3:58717059-58717078 | MS.gene45771:intron | 45.0% | |
| !!! | ATAATTTAGTTTTTAATAAA+AGG | - | chr8.3:58716736-58716755 | None:intergenic | 5.0% |
| AGTGCCTGTGTCGTGTGTAT+TGG | - | chr8.3:58716797-58716816 | None:intergenic | 50.0% | |
| GAGCAACAAAGGAACCCAGA+AGG | - | chr8.3:58716264-58716283 | None:intergenic | 50.0% | |
| GCTTCCCATCTGTGTTCACT+TGG | - | chr8.3:58717067-58717086 | None:intergenic | 50.0% | |
| !!! | AAAGGCCACTTTTGGCCTTC+TGG | + | chr8.3:58716246-58716265 | MS.gene45771:CDS | 50.0% |
| !!! | AAGGCCACTTTTGGCCTTCT+GGG | + | chr8.3:58716247-58716266 | MS.gene45771:CDS | 50.0% |
| ACACGACACAGGCACTACGT+TGG | + | chr8.3:58716801-58716820 | MS.gene45771:intron | 55.0% | |
| GGAACCCAGAAGGCCAAAAG+TGG | - | chr8.3:58716254-58716273 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 58716224 | 58717553 | 58716224 | ID=MS.gene45771 |
| chr8.3 | mRNA | 58716224 | 58717553 | 58716224 | ID=MS.gene45771.t1;Parent=MS.gene45771 |
| chr8.3 | exon | 58716224 | 58716335 | 58716224 | ID=MS.gene45771.t1.exon1;Parent=MS.gene45771.t1 |
| chr8.3 | CDS | 58716224 | 58716335 | 58716224 | ID=cds.MS.gene45771.t1;Parent=MS.gene45771.t1 |
| chr8.3 | exon | 58717060 | 58717553 | 58717060 | ID=MS.gene45771.t1.exon2;Parent=MS.gene45771.t1 |
| chr8.3 | CDS | 58717060 | 58717553 | 58717060 | ID=cds.MS.gene45771.t1;Parent=MS.gene45771.t1 |
| Gene Sequence |
| Protein sequence |
