Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55263.t1 | XP_003613849.1 | 97.6 | 248 | 6 | 0 | 1 | 248 | 1 | 248 | 4.00E-140 | 507.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55263.t1 | Q9LDR9 | 84.3 | 249 | 38 | 1 | 1 | 248 | 1 | 249 | 5.9e-124 | 444.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55263.t1 | G7KGP1 | 97.6 | 248 | 6 | 0 | 1 | 248 | 1 | 248 | 2.9e-140 | 507.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene55263 | 0.819936 | 8.94E-53 | -1.69E-46 |
| MS.gene049297 | MS.gene55263 | 0.853343 | 2.54E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene55263 | 0.861086 | 1.31E-63 | -1.69E-46 |
| MS.gene050128 | MS.gene55263 | 0.801686 | 8.01E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene55263 | 0.820181 | 7.86E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene55263 | 0.809885 | 1.52E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene55263 | -0.814714 | 1.34E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene55263 | 0.813719 | 2.22E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene55263 | 0.834792 | 2.44E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene55263 | 0.814896 | 1.22E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene55263 | 0.897046 | 2.05E-76 | -1.69E-46 |
| MS.gene051663 | MS.gene55263 | 0.87076 | 1.14E-66 | -1.69E-46 |
| MS.gene051983 | MS.gene55263 | 0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene55263 | 0.827261 | 1.73E-54 | -1.69E-46 |
| MS.gene052302 | MS.gene55263 | 0.814475 | 1.51E-51 | -1.69E-46 |
| MS.gene052309 | MS.gene55263 | -0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene052376 | MS.gene55263 | 0.809174 | 2.16E-50 | -1.69E-46 |
| MS.gene053073 | MS.gene55263 | 0.807744 | 4.35E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene55263 | 0.802236 | 6.17E-49 | -1.69E-46 |
| MS.gene053559 | MS.gene55263 | 0.829217 | 5.83E-55 | -1.69E-46 |
| MS.gene053630 | MS.gene55263 | 0.807273 | 5.48E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene55263 | 0.873435 | 1.47E-67 | -1.69E-46 |
| MS.gene053907 | MS.gene55263 | 0.829052 | 6.39E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene55263 | 0.815232 | 1.03E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene55263 | 0.8606 | 1.84E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene55263 | 0.81182 | 5.78E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene55263 | 0.806294 | 8.82E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene55263 | 0.846271 | 2.41E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene55263 | 0.83823 | 3.25E-57 | -1.69E-46 |
| MS.gene055441 | MS.gene55263 | 0.800957 | 1.13E-48 | -1.69E-46 |
| MS.gene055712 | MS.gene55263 | 0.806066 | 9.85E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene55263 | 0.8271 | 1.88E-54 | -1.69E-46 |
| MS.gene056875 | MS.gene55263 | 0.813086 | 3.06E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene55263 | 0.80401 | 2.65E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene55263 | 0.811921 | 5.50E-51 | -1.69E-46 |
| MS.gene057260 | MS.gene55263 | 0.811584 | 6.51E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene55263 | 0.846229 | 2.48E-59 | -1.69E-46 |
| MS.gene057754 | MS.gene55263 | 0.816369 | 5.73E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene55263 | 0.826495 | 2.63E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene55263 | 0.810135 | 1.34E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene55263 | 0.801337 | 9.44E-49 | -1.69E-46 |
| MS.gene058201 | MS.gene55263 | 0.822188 | 2.71E-53 | -1.69E-46 |
| MS.gene058661 | MS.gene55263 | -0.821263 | 4.43E-53 | -1.69E-46 |
| MS.gene058833 | MS.gene55263 | 0.809368 | 1.96E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene55263 | 0.810205 | 1.29E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene55263 | 0.811032 | 8.58E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene55263 | 0.809242 | 2.08E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene55263 | 0.84173 | 3.98E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene55263 | 0.808084 | 3.68E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene55263 | 0.866109 | 3.63E-65 | -1.69E-46 |
| MS.gene059899 | MS.gene55263 | 0.851255 | 1.00E-60 | -1.69E-46 |
| MS.gene060084 | MS.gene55263 | 0.813598 | 2.36E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene55263 | 0.849708 | 2.72E-60 | -1.69E-46 |
| MS.gene061049 | MS.gene55263 | 0.829644 | 4.59E-55 | -1.69E-46 |
| MS.gene061112 | MS.gene55263 | 0.843995 | 9.94E-59 | -1.69E-46 |
| MS.gene061113 | MS.gene55263 | 0.843134 | 1.69E-58 | -1.69E-46 |
| MS.gene061265 | MS.gene55263 | 0.845958 | 2.93E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55263 | MS.gene24107 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55263.t1 | MTR_5g041700 | 97.581 | 248 | 6 | 0 | 1 | 248 | 1 | 248 | 0.0 | 496 |
| MS.gene55263.t1 | MTR_4g081950 | 87.045 | 247 | 32 | 0 | 1 | 247 | 37 | 283 | 3.56e-164 | 455 |
| MS.gene55263.t1 | MTR_3g094040 | 80.165 | 242 | 48 | 0 | 6 | 247 | 12 | 253 | 1.06e-146 | 410 |
| MS.gene55263.t1 | MTR_3g094060 | 80.165 | 242 | 48 | 0 | 6 | 247 | 12 | 253 | 1.47e-146 | 409 |
| MS.gene55263.t1 | MTR_3g435430 | 80.769 | 234 | 45 | 0 | 14 | 247 | 14 | 247 | 1.15e-145 | 407 |
| MS.gene55263.t1 | MTR_5g075320 | 73.984 | 246 | 63 | 1 | 3 | 247 | 6 | 251 | 4.17e-139 | 390 |
| MS.gene55263.t1 | MTR_7g011060 | 76.305 | 249 | 48 | 3 | 1 | 247 | 1 | 240 | 2.34e-136 | 383 |
| MS.gene55263.t1 | MTR_3g466760 | 75.709 | 247 | 60 | 0 | 1 | 247 | 14 | 260 | 2.55e-133 | 376 |
| MS.gene55263.t1 | MTR_3g466790 | 75.304 | 247 | 61 | 0 | 1 | 247 | 8 | 254 | 8.28e-133 | 375 |
| MS.gene55263.t1 | MTR_5g079950 | 74.236 | 229 | 57 | 1 | 22 | 248 | 30 | 258 | 2.91e-126 | 358 |
| MS.gene55263.t1 | MTR_2g097030 | 66.795 | 259 | 75 | 2 | 1 | 248 | 1 | 259 | 8.43e-126 | 357 |
| MS.gene55263.t1 | MTR_7g061720 | 74.672 | 229 | 56 | 1 | 22 | 248 | 29 | 257 | 1.42e-125 | 357 |
| MS.gene55263.t1 | MTR_6g012520 | 75.200 | 250 | 51 | 3 | 1 | 247 | 1 | 242 | 5.26e-123 | 350 |
| MS.gene55263.t1 | MTR_4g063975 | 72.489 | 229 | 61 | 1 | 22 | 248 | 29 | 257 | 1.36e-117 | 337 |
| MS.gene55263.t1 | MTR_1g026020 | 65.919 | 223 | 73 | 2 | 24 | 243 | 28 | 250 | 1.61e-111 | 321 |
| MS.gene55263.t1 | MTR_1g085460 | 65.315 | 222 | 73 | 3 | 25 | 242 | 30 | 251 | 3.03e-105 | 305 |
| MS.gene55263.t1 | MTR_7g111010 | 59.761 | 251 | 95 | 5 | 3 | 247 | 4 | 254 | 1.16e-104 | 303 |
| MS.gene55263.t1 | MTR_7g110990 | 64.474 | 228 | 76 | 4 | 25 | 247 | 12 | 239 | 7.30e-104 | 301 |
| MS.gene55263.t1 | MTR_7g013150 | 57.322 | 239 | 98 | 2 | 6 | 242 | 11 | 247 | 3.44e-97 | 285 |
| MS.gene55263.t1 | MTR_4g124340 | 58.667 | 225 | 88 | 3 | 23 | 244 | 59 | 281 | 7.18e-97 | 285 |
| MS.gene55263.t1 | MTR_7g013120 | 54.839 | 248 | 107 | 3 | 2 | 246 | 6 | 251 | 4.69e-95 | 279 |
| MS.gene55263.t1 | MTR_7g013140 | 57.500 | 240 | 96 | 3 | 7 | 244 | 12 | 247 | 1.37e-94 | 278 |
| MS.gene55263.t1 | MTR_8g058990 | 55.870 | 247 | 104 | 3 | 2 | 245 | 6 | 250 | 1.53e-92 | 273 |
| MS.gene55263.t1 | MTR_8g464350 | 54.098 | 244 | 108 | 2 | 1 | 242 | 7 | 248 | 1.14e-91 | 271 |
| MS.gene55263.t1 | MTR_5g076950 | 56.696 | 224 | 96 | 1 | 25 | 247 | 41 | 264 | 3.31e-90 | 267 |
| MS.gene55263.t1 | MTR_5g011210 | 57.658 | 222 | 90 | 3 | 25 | 243 | 37 | 257 | 6.80e-89 | 264 |
| MS.gene55263.t1 | MTR_0040s0140 | 48.996 | 249 | 125 | 1 | 1 | 247 | 8 | 256 | 7.74e-87 | 258 |
| MS.gene55263.t1 | MTR_4g102450 | 55.605 | 223 | 93 | 4 | 25 | 243 | 36 | 256 | 4.05e-84 | 252 |
| MS.gene55263.t1 | MTR_2g090255 | 48.163 | 245 | 124 | 2 | 6 | 247 | 8 | 252 | 4.84e-84 | 251 |
| MS.gene55263.t1 | MTR_3g064510 | 52.790 | 233 | 101 | 5 | 25 | 248 | 53 | 285 | 6.11e-81 | 244 |
| MS.gene55263.t1 | MTR_6g012500 | 70.000 | 120 | 30 | 1 | 134 | 247 | 161 | 280 | 3.43e-53 | 173 |
| MS.gene55263.t1 | MTR_0008s0120 | 38.618 | 246 | 92 | 4 | 3 | 245 | 7 | 196 | 3.37e-46 | 153 |
| MS.gene55263.t1 | MTR_2g090270 | 31.197 | 234 | 131 | 9 | 25 | 243 | 35 | 253 | 1.77e-25 | 101 |
| MS.gene55263.t1 | MTR_2g090265 | 29.845 | 258 | 151 | 10 | 1 | 243 | 9 | 251 | 5.19e-25 | 99.8 |
| MS.gene55263.t1 | MTR_0118s0070 | 32.314 | 229 | 127 | 10 | 30 | 242 | 53 | 269 | 1.32e-24 | 99.0 |
| MS.gene55263.t1 | MTR_0122s0020 | 31.169 | 231 | 135 | 9 | 25 | 243 | 41 | 259 | 1.38e-23 | 96.3 |
| MS.gene55263.t1 | MTR_0809s0010 | 30.769 | 234 | 130 | 11 | 25 | 242 | 47 | 264 | 8.20e-22 | 91.7 |
| MS.gene55263.t1 | MTR_4g028640 | 31.197 | 234 | 128 | 11 | 25 | 242 | 42 | 258 | 2.40e-21 | 90.1 |
| MS.gene55263.t1 | MTR_5g013440 | 27.801 | 241 | 156 | 9 | 9 | 242 | 16 | 245 | 7.72e-18 | 80.5 |
| MS.gene55263.t1 | MTR_4g099370 | 28.761 | 226 | 144 | 9 | 25 | 242 | 28 | 244 | 6.01e-17 | 78.2 |
| MS.gene55263.t1 | MTR_0122s0020 | 32.386 | 176 | 96 | 8 | 25 | 189 | 41 | 204 | 1.71e-15 | 73.2 |
| MS.gene55263.t1 | MTR_4g075790 | 28.829 | 222 | 127 | 9 | 36 | 242 | 32 | 237 | 2.62e-15 | 73.6 |
| MS.gene55263.t1 | MTR_1g085365 | 55.357 | 56 | 25 | 0 | 192 | 247 | 4 | 59 | 3.13e-15 | 68.6 |
| MS.gene55263.t1 | MTR_4g098930 | 27.660 | 235 | 136 | 10 | 25 | 242 | 29 | 246 | 2.97e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55263.t1 | AT2G03090 | 83.065 | 248 | 42 | 0 | 1 | 248 | 6 | 253 | 3.30e-155 | 431 |
| MS.gene55263.t1 | AT1G69530 | 82.800 | 250 | 41 | 2 | 1 | 248 | 1 | 250 | 1.21e-152 | 425 |
| MS.gene55263.t1 | AT1G69530 | 82.800 | 250 | 41 | 2 | 1 | 248 | 1 | 250 | 1.21e-152 | 425 |
| MS.gene55263.t1 | AT1G69530 | 81.600 | 250 | 44 | 2 | 1 | 248 | 1 | 250 | 3.08e-150 | 420 |
| MS.gene55263.t1 | AT1G26770 | 84.337 | 249 | 38 | 1 | 1 | 248 | 1 | 249 | 6.35e-146 | 408 |
| MS.gene55263.t1 | AT1G26770 | 84.337 | 249 | 38 | 1 | 1 | 248 | 11 | 259 | 7.53e-146 | 408 |
| MS.gene55263.t1 | AT5G56320 | 76.829 | 246 | 56 | 1 | 3 | 248 | 8 | 252 | 2.14e-139 | 392 |
| MS.gene55263.t1 | AT5G56320 | 76.829 | 246 | 56 | 1 | 3 | 248 | 8 | 252 | 2.14e-139 | 392 |
| MS.gene55263.t1 | AT5G56320 | 76.829 | 246 | 56 | 1 | 3 | 248 | 8 | 252 | 1.88e-138 | 391 |
| MS.gene55263.t1 | AT2G40610 | 70.850 | 247 | 68 | 2 | 2 | 247 | 10 | 253 | 5.23e-133 | 375 |
| MS.gene55263.t1 | AT2G39700 | 75.983 | 229 | 53 | 1 | 22 | 248 | 28 | 256 | 2.59e-129 | 366 |
| MS.gene55263.t1 | AT1G69530 | 73.600 | 250 | 34 | 3 | 1 | 248 | 1 | 220 | 4.94e-128 | 362 |
| MS.gene55263.t1 | AT1G69530 | 77.729 | 229 | 47 | 3 | 1 | 227 | 1 | 227 | 3.57e-127 | 360 |
| MS.gene55263.t1 | AT5G02260 | 74.236 | 229 | 57 | 1 | 22 | 248 | 29 | 257 | 8.44e-127 | 360 |
| MS.gene55263.t1 | AT3G55500 | 67.717 | 254 | 76 | 2 | 1 | 248 | 6 | 259 | 5.95e-126 | 358 |
| MS.gene55263.t1 | AT5G05290 | 72.124 | 226 | 62 | 1 | 23 | 247 | 30 | 255 | 2.73e-125 | 356 |
| MS.gene55263.t1 | AT2G37640 | 73.362 | 229 | 59 | 1 | 22 | 248 | 33 | 261 | 3.15e-124 | 353 |
| MS.gene55263.t1 | AT3G29030 | 74.222 | 225 | 49 | 2 | 25 | 248 | 38 | 254 | 2.07e-121 | 346 |
| MS.gene55263.t1 | AT2G28950 | 67.578 | 256 | 75 | 2 | 1 | 248 | 1 | 256 | 5.63e-121 | 345 |
| MS.gene55263.t1 | AT1G20190 | 67.713 | 223 | 69 | 2 | 24 | 243 | 25 | 247 | 5.58e-111 | 320 |
| MS.gene55263.t1 | AT2G37640 | 71.292 | 209 | 58 | 1 | 42 | 248 | 28 | 236 | 3.00e-110 | 317 |
| MS.gene55263.t1 | AT4G01630 | 62.810 | 242 | 85 | 4 | 6 | 242 | 8 | 249 | 7.95e-107 | 309 |
| MS.gene55263.t1 | AT5G39280 | 55.702 | 228 | 99 | 1 | 17 | 244 | 46 | 271 | 2.05e-94 | 278 |
| MS.gene55263.t1 | AT5G39300 | 55.459 | 229 | 100 | 1 | 16 | 244 | 46 | 272 | 4.13e-94 | 278 |
| MS.gene55263.t1 | AT5G39270 | 57.273 | 220 | 92 | 1 | 25 | 244 | 58 | 275 | 2.19e-92 | 273 |
| MS.gene55263.t1 | AT5G39290 | 56.364 | 220 | 94 | 1 | 25 | 244 | 58 | 275 | 1.10e-91 | 271 |
| MS.gene55263.t1 | AT1G20190 | 64.706 | 187 | 63 | 2 | 60 | 243 | 2 | 188 | 9.57e-89 | 261 |
| MS.gene55263.t1 | AT1G12560 | 53.785 | 251 | 110 | 5 | 3 | 248 | 13 | 262 | 3.86e-88 | 262 |
| MS.gene55263.t1 | AT1G62980 | 53.061 | 245 | 108 | 4 | 1 | 242 | 10 | 250 | 3.01e-87 | 259 |
| MS.gene55263.t1 | AT5G39310 | 55.405 | 222 | 96 | 2 | 24 | 244 | 89 | 308 | 3.12e-87 | 261 |
| MS.gene55263.t1 | AT3G03220 | 53.778 | 225 | 103 | 1 | 25 | 248 | 40 | 264 | 8.19e-86 | 256 |
| MS.gene55263.t1 | AT3G15370 | 52.400 | 250 | 104 | 7 | 8 | 247 | 7 | 251 | 3.27e-84 | 251 |
| MS.gene55263.t1 | AT5G39260 | 52.212 | 226 | 100 | 2 | 20 | 244 | 40 | 258 | 9.80e-79 | 238 |
| MS.gene55263.t1 | AT4G38210 | 47.967 | 246 | 121 | 3 | 6 | 247 | 12 | 254 | 2.35e-78 | 237 |
| MS.gene55263.t1 | AT3G15370 | 46.786 | 280 | 104 | 8 | 8 | 247 | 7 | 281 | 1.51e-77 | 236 |
| MS.gene55263.t1 | AT4G28250 | 34.764 | 233 | 125 | 10 | 25 | 243 | 36 | 255 | 2.23e-28 | 108 |
| MS.gene55263.t1 | AT2G20750 | 32.189 | 233 | 134 | 9 | 25 | 243 | 40 | 262 | 1.88e-25 | 101 |
| MS.gene55263.t1 | AT4G28250 | 33.621 | 232 | 123 | 10 | 25 | 243 | 36 | 249 | 1.40e-24 | 98.6 |
| MS.gene55263.t1 | AT1G65680 | 30.864 | 243 | 141 | 10 | 15 | 242 | 37 | 267 | 2.99e-23 | 95.5 |
| MS.gene55263.t1 | AT1G65681 | 30.876 | 217 | 125 | 9 | 39 | 242 | 12 | 216 | 2.35e-19 | 84.0 |
| MS.gene55263.t1 | AT2G20750 | 31.792 | 173 | 98 | 6 | 25 | 186 | 40 | 203 | 9.66e-18 | 79.7 |
| MS.gene55263.t1 | AT4G17030 | 29.084 | 251 | 149 | 9 | 6 | 242 | 8 | 243 | 1.03e-17 | 80.1 |
| MS.gene55263.t1 | AT2G45110 | 28.814 | 236 | 129 | 9 | 28 | 242 | 36 | 253 | 2.08e-17 | 79.3 |
| MS.gene55263.t1 | AT4G28250 | 33.143 | 175 | 90 | 7 | 25 | 189 | 36 | 193 | 1.07e-16 | 76.6 |
| MS.gene55263.t1 | AT4G28250 | 33.721 | 172 | 87 | 7 | 25 | 186 | 36 | 190 | 2.60e-16 | 75.5 |
| MS.gene55263.t1 | AT3G60570 | 25.984 | 254 | 156 | 9 | 8 | 242 | 11 | 251 | 1.73e-15 | 74.3 |
| MS.gene55263.t1 | AT3G45970 | 26.415 | 212 | 134 | 9 | 43 | 242 | 14 | 215 | 1.70e-14 | 71.2 |
| MS.gene55263.t1 | AT3G45960 | 29.126 | 206 | 125 | 9 | 48 | 242 | 46 | 241 | 1.83e-13 | 68.6 |
| MS.gene55263.t1 | AT4G38400 | 26.699 | 206 | 130 | 8 | 48 | 242 | 47 | 242 | 5.02e-12 | 64.7 |
| MS.gene55263.t1 | AT3G45970 | 25.604 | 207 | 132 | 9 | 48 | 242 | 46 | 242 | 7.12e-12 | 63.9 |
Find 73 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCCCAGCTGGTTGGTCTTT+TGG | 0.178373 | 5.2:-31246431 | MS.gene55263:CDS |
| CAAAGCAACAATTATCTTAA+TGG | 0.193864 | 5.2:-31246515 | MS.gene55263:CDS |
| GGATGCCAATGTCTAGAAAT+TGG | 0.241916 | 5.2:-31246550 | MS.gene55263:CDS |
| AATGCACATGCAACTTTCTA+TGG | 0.254508 | 5.2:-31247877 | MS.gene55263:CDS |
| TCTCATTGGGTTGTTCTTCA+TGG | 0.255156 | 5.2:-31247950 | MS.gene55263:CDS |
| GTGTCTTCCTGGCTCTATTT+TGG | 0.260571 | 5.2:-31247581 | MS.gene55263:CDS |
| CTAGAAATTGGGGTCAAAAT+TGG | 0.289763 | 5.2:-31246538 | MS.gene55263:CDS |
| TTAGGTGGTGCATGTGGATA+TGG | 0.293336 | 5.2:-31247721 | MS.gene55263:intron |
| GTACATTCAGTAGCTATTAA+AGG | 0.297161 | 5.2:-31246587 | MS.gene55263:CDS |
| GCAGAAGAAGGGGAGGAATT+AGG | 0.323849 | 5.2:-31246676 | MS.gene55263:CDS |
| GTGGTTCTTGCTTTGAGATT+AGG | 0.333003 | 5.2:-31247624 | MS.gene55263:CDS |
| TATGGTGTCTCTAACGGAAT+TGG | 0.350934 | 5.2:+31246390 | None:intergenic |
| GACCGTAAATGGTGTCTTCC+TGG | 0.357239 | 5.2:-31247592 | MS.gene55263:CDS |
| CACCATCCTCCATTGTTATT+AGG | 0.369879 | 5.2:+31247520 | None:intergenic |
| GCTATTAAAGGGTCAAGAAC+AGG | 0.379089 | 5.2:-31246575 | MS.gene55263:CDS |
| TTCCATAACCTTGACTGTAT+AGG | 0.380723 | 5.2:+31247695 | None:intergenic |
| TGGCCAAGCTTTGTCTTTCA+AGG | 0.384678 | 5.2:-31246495 | MS.gene55263:CDS |
| GATGCCAATGTCTAGAAATT+GGG | 0.384818 | 5.2:-31246549 | MS.gene55263:CDS |
| AGCCAGGAAGACACCATTTA+CGG | 0.387805 | 5.2:+31247590 | None:intergenic |
| TGCTTTGAGATTAGGTGTGC+TGG | 0.396638 | 5.2:-31247616 | MS.gene55263:CDS |
| AATTCCTCCCCTTCTTCTGC+AGG | 0.397486 | 5.2:+31246679 | None:intergenic |
| ACCAGCTGGGGCAGCATTGT+TGG | 0.398932 | 5.2:+31246442 | None:intergenic |
| TTATTAGGCAAGGCATTGTT+TGG | 0.406087 | 5.2:+31247535 | None:intergenic |
| ATTTACCTTCTGTAAGAAAC+AGG | 0.410554 | 5.2:+31247421 | None:intergenic |
| GGTGTGCTGGTGACCGTAAA+TGG | 0.417502 | 5.2:-31247603 | MS.gene55263:CDS |
| AACCTATACAGTCAAGGTTA+TGG | 0.427075 | 5.2:-31247697 | MS.gene55263:CDS |
| CTTATGGTTATGGTGGAGGA+TGG | 0.431228 | 5.2:-31247903 | MS.gene55263:CDS |
| GTAACAAATGTGGGTGGTGC+TGG | 0.440862 | 5.2:-31246614 | MS.gene55263:CDS |
| TACATTCAGTAGCTATTAAA+GGG | 0.441653 | 5.2:-31246586 | MS.gene55263:CDS |
| ATGGTGTCTCTAACGGAATT+GGG | 0.459163 | 5.2:+31246391 | None:intergenic |
| GGAATTAGGTTCACAATCAA+TGG | 0.459198 | 5.2:-31246662 | MS.gene55263:CDS |
| ACAATGCTGCCCCAGCTGGT+TGG | 0.464148 | 5.2:-31246439 | MS.gene55263:CDS |
| TCCAACAATGCTGCCCCAGC+TGG | 0.465999 | 5.2:-31246443 | MS.gene55263:CDS |
| TAACCTTGAAAGACAAAGCT+TGG | 0.500681 | 5.2:+31246492 | None:intergenic |
| TCTGCTTATGGTTATGGTGG+AGG | 0.502421 | 5.2:-31247907 | MS.gene55263:CDS |
| TTGTTCCTGTTTCTTACAGA+AGG | 0.505585 | 5.2:-31247426 | MS.gene55263:intron |
| TCCTCCATTGTTATTAGGCA+AGG | 0.509324 | 5.2:+31247525 | None:intergenic |
| AGTGATGCATCAGGAACAAT+GGG | 0.509766 | 5.2:-31247850 | MS.gene55263:intron |
| GTAGGGTACCCTGCAGAAGA+AGG | 0.516806 | 5.2:-31246688 | MS.gene55263:intron |
| TGACCCCAATTTCTAGACAT+TGG | 0.519449 | 5.2:+31246545 | None:intergenic |
| TATGGAGGAAGTGATGCATC+AGG | 0.519711 | 5.2:-31247859 | MS.gene55263:CDS |
| TGACCAAAAGACCAACCAGC+TGG | 0.520912 | 5.2:+31246428 | None:intergenic |
| TCATCTGCTTATGGTTATGG+TGG | 0.521601 | 5.2:-31247910 | MS.gene55263:CDS |
| TTCAACAGTGGTTTGAGCTG+TGG | 0.522814 | 5.2:-31247643 | MS.gene55263:CDS |
| AGAATTGCTCAATACAAAGC+TGG | 0.532239 | 5.2:-31247451 | MS.gene55263:CDS |
| TTATGGTTATGGTGGAGGAT+GGG | 0.534886 | 5.2:-31247902 | MS.gene55263:CDS |
| TTAGGCAAGGCATTGTTTGG+TGG | 0.537849 | 5.2:+31247538 | None:intergenic |
| AGATCAAAGTGTTGCAAAGG+AGG | 0.543969 | 5.2:+31247493 | None:intergenic |
| TTCAAGGTTACAACAAGTGA+TGG | 0.544265 | 5.2:-31246479 | MS.gene55263:CDS |
| GACCAAAAGACCAACCAGCT+GGG | 0.545554 | 5.2:+31246429 | None:intergenic |
| GCAGTGACCAAAATAGAGCC+AGG | 0.547622 | 5.2:+31247574 | None:intergenic |
| ATTCCTCCCCTTCTTCTGCA+GGG | 0.548478 | 5.2:+31246680 | None:intergenic |
| TACTAGAACTAAGTTGAAGT+AGG | 0.551749 | 5.2:+31246634 | None:intergenic |
| TAGGGTACCCTGCAGAAGAA+GGG | 0.557129 | 5.2:-31246687 | MS.gene55263:CDS |
| ACGGAATTGGGCACCAGTGT+AGG | 0.562519 | 5.2:+31246403 | None:intergenic |
| AAGTGATGCATCAGGAACAA+TGG | 0.564601 | 5.2:-31247851 | MS.gene55263:CDS |
| CTTAGTTCTAGTAACAAATG+TGG | 0.570683 | 5.2:-31246624 | MS.gene55263:CDS |
| GATCAAAGTGTTGCAAAGGA+GGG | 0.592393 | 5.2:+31247494 | None:intergenic |
| GCAAGATCAAAGTGTTGCAA+AGG | 0.592711 | 5.2:+31247490 | None:intergenic |
| TTAGTTCTAGTAACAAATGT+GGG | 0.599321 | 5.2:-31246623 | MS.gene55263:CDS |
| AATGCCTTGCCTAATAACAA+TGG | 0.606510 | 5.2:-31247529 | MS.gene55263:CDS |
| CTATTAAAGGGTCAAGAACA+GGG | 0.615693 | 5.2:-31246574 | MS.gene55263:CDS |
| ATGCCAATGTCTAGAAATTG+GGG | 0.621765 | 5.2:-31246548 | MS.gene55263:CDS |
| AGGGTACCCTGCAGAAGAAG+GGG | 0.622412 | 5.2:-31246686 | MS.gene55263:CDS |
| ACCAAAAGACCAACCAGCTG+GGG | 0.625454 | 5.2:+31246430 | None:intergenic |
| AGCACAGCTTTGTTCAACAG+TGG | 0.628810 | 5.2:-31247655 | MS.gene55263:CDS |
| TGCCTAATAACAATGGAGGA+TGG | 0.634087 | 5.2:-31247522 | MS.gene55263:CDS |
| GCACATGCAACTTTCTATGG+AGG | 0.636010 | 5.2:-31247874 | MS.gene55263:CDS |
| GCCTTGCCTAATAACAATGG+AGG | 0.642659 | 5.2:-31247526 | MS.gene55263:CDS |
| TATGGAAACCTATACAGTCA+AGG | 0.647219 | 5.2:-31247703 | MS.gene55263:CDS |
| GTACCCTGCAGAAGAAGGGG+AGG | 0.667861 | 5.2:-31246683 | MS.gene55263:CDS |
| GTTCTAGTAACAAATGTGGG+TGG | 0.696895 | 5.2:-31246620 | MS.gene55263:CDS |
| TTAAAGGGTCAAGAACAGGG+TGG | 0.777410 | 5.2:-31246571 | MS.gene55263:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTTTTTATTAAAAAA+AGG | - | chr5.2:31247462-31247481 | MS.gene55263:CDS | 0.0% |
| !!! | ACTAATATTAATTATTGTTT+TGG | + | chr5.2:31247408-31247427 | None:intergenic | 10.0% |
| !!! | TTTAAAATTATTTATTAGAG+AGG | + | chr5.2:31247375-31247394 | None:intergenic | 10.0% |
| !! | ATTAAACATATTAGTCAAAA+GGG | + | chr5.2:31246601-31246620 | None:intergenic | 15.0% |
| !! | TATTAAACATATTAGTCAAA+AGG | + | chr5.2:31246602-31246621 | None:intergenic | 15.0% |
| !! | TTTATACTATTTAAGCAATT+TGG | - | chr5.2:31246569-31246588 | MS.gene55263:CDS | 15.0% |
| !!! | AATTTTTAATCACATGTATT+TGG | - | chr5.2:31247078-31247097 | MS.gene55263:intron | 15.0% |
| !!! | ATATTGAATTTTTTTTTAGG+TGG | - | chr5.2:31246619-31246638 | MS.gene55263:CDS | 15.0% |
| !! | ACACTCTAATATAAAACAAA+AGG | + | chr5.2:31247115-31247134 | None:intergenic | 20.0% |
| !! | CTAATATAAAACAAAAGGTA+GGG | + | chr5.2:31247110-31247129 | None:intergenic | 20.0% |
| !! | TCTAATATAAAACAAAAGGT+AGG | + | chr5.2:31247111-31247130 | None:intergenic | 20.0% |
| !! | TGAGATTAAATTTGTGTAAT+GGG | - | chr5.2:31246998-31247017 | MS.gene55263:intron | 20.0% |
| !! | TTAAACATATTAGTCAAAAG+GGG | + | chr5.2:31246600-31246619 | None:intergenic | 20.0% |
| !! | TTGAGATTAAATTTGTGTAA+TGG | - | chr5.2:31246997-31247016 | MS.gene55263:intron | 20.0% |
| !!! | GTATTTTTTTCTCTCTAAAT+GGG | - | chr5.2:31247209-31247228 | MS.gene55263:intron | 20.0% |
| !!! | TGTATTTTTTTCTCTCTAAA+TGG | - | chr5.2:31247208-31247227 | MS.gene55263:intron | 20.0% |
| ! | AACTTTATCTAGCTAGTTAA+TGG | - | chr5.2:31247159-31247178 | MS.gene55263:intron | 25.0% |
| ! | AATGGTACAATTAACATTGA+AGG | + | chr5.2:31247349-31247368 | None:intergenic | 25.0% |
| ! | ACTTTATCTAGCTAGTTAAT+GGG | - | chr5.2:31247160-31247179 | MS.gene55263:intron | 25.0% |
| ! | AGAAGTAATTTATTGTTGTG+TGG | - | chr5.2:31247638-31247657 | MS.gene55263:CDS | 25.0% |
| ! | ATGGTACAATTAACATTGAA+GGG | + | chr5.2:31247348-31247367 | None:intergenic | 25.0% |
| ! | CAAAGCAACAATTATCTTAA+TGG | - | chr5.2:31247840-31247859 | MS.gene55263:intron | 25.0% |
| ! | TACATTCAGTAGCTATTAAA+GGG | - | chr5.2:31247769-31247788 | MS.gene55263:intron | 25.0% |
| ! | TATTTATTAGAGAGGTGAAA+TGG | + | chr5.2:31247367-31247386 | None:intergenic | 25.0% |
| !!! | ATTAAATTTGTGTAATGGGT+TGG | - | chr5.2:31247002-31247021 | MS.gene55263:intron | 25.0% |
| !!! | TTAGTTCTAGTAACAAATGT+GGG | - | chr5.2:31247732-31247751 | MS.gene55263:intron | 25.0% |
| !!! | TTGAAGGGTACTATATAAAA+AGG | + | chr5.2:31247333-31247352 | None:intergenic | 25.0% |
| ATTTACCTTCTGTAAGAAAC+AGG | + | chr5.2:31246937-31246956 | None:intergenic | 30.0% | |
| CAAAATGCAACAAAAAGTGA+AGG | + | chr5.2:31246980-31246999 | None:intergenic | 30.0% | |
| CTTTATCTAGCTAGTTAATG+GGG | - | chr5.2:31247161-31247180 | MS.gene55263:intron | 30.0% | |
| GTACATTCAGTAGCTATTAA+AGG | - | chr5.2:31247768-31247787 | MS.gene55263:intron | 30.0% | |
| TATTTAAGGAGTCCTTGTTA+GGG | - | chr5.2:31247531-31247550 | MS.gene55263:CDS | 30.0% | |
| ! | ACTATGTTTTCATCTGCTTA+TGG | - | chr5.2:31246436-31246455 | MS.gene55263:CDS | 30.0% |
| ! | TACTAGAACTAAGTTGAAGT+AGG | + | chr5.2:31247724-31247743 | None:intergenic | 30.0% |
| ! | TGAGCAATTCTAAGAAAAAC+AGG | + | chr5.2:31246895-31246914 | None:intergenic | 30.0% |
| ! | TTTTCATCTGCTTATGGTTA+TGG | - | chr5.2:31246442-31246461 | MS.gene55263:CDS | 30.0% |
| !! | CTATATAAAAGCATCCACAA+TGG | + | chr5.2:31247562-31247581 | None:intergenic | 30.0% |
| !! | CTTAGTTCTAGTAACAAATG+TGG | - | chr5.2:31247731-31247750 | MS.gene55263:intron | 30.0% |
| !! | TGTCACTTTCAACTTGTAAA+TGG | - | chr5.2:31247032-31247051 | MS.gene55263:intron | 30.0% |
| AAATAAGTGATGTGTCACGT+GGG | - | chr5.2:31247505-31247524 | MS.gene55263:CDS | 35.0% | |
| AACCTATACAGTCAAGGTTA+TGG | - | chr5.2:31246658-31246677 | MS.gene55263:CDS | 35.0% | |
| AATGCACATGCAACTTTCTA+TGG | - | chr5.2:31246478-31246497 | MS.gene55263:CDS | 35.0% | |
| AATGCCTTGCCTAATAACAA+TGG | - | chr5.2:31246826-31246845 | MS.gene55263:intron | 35.0% | |
| ACATATTAGTCAAAAGGGGT+TGG | + | chr5.2:31246596-31246615 | None:intergenic | 35.0% | |
| AGAATTGCTCAATACAAAGC+TGG | - | chr5.2:31246904-31246923 | MS.gene55263:intron | 35.0% | |
| ATGCCAATGTCTAGAAATTG+GGG | - | chr5.2:31247807-31247826 | MS.gene55263:intron | 35.0% | |
| ATTGTTGTGTGGATTTGTGT+AGG | - | chr5.2:31247649-31247668 | MS.gene55263:CDS | 35.0% | |
| CTAGAAATTGGGGTCAAAAT+TGG | - | chr5.2:31247817-31247836 | MS.gene55263:intron | 35.0% | |
| CTATTAAAGGGTCAAGAACA+GGG | - | chr5.2:31247781-31247800 | MS.gene55263:intron | 35.0% | |
| CTATTTAAGGAGTCCTTGTT+AGG | - | chr5.2:31247530-31247549 | MS.gene55263:CDS | 35.0% | |
| GATGCCAATGTCTAGAAATT+GGG | - | chr5.2:31247806-31247825 | MS.gene55263:intron | 35.0% | |
| GGAATTAGGTTCACAATCAA+TGG | - | chr5.2:31247693-31247712 | MS.gene55263:CDS | 35.0% | |
| TAAATAAGTGATGTGTCACG+TGG | - | chr5.2:31247504-31247523 | MS.gene55263:CDS | 35.0% | |
| TAACCTTGAAAGACAAAGCT+TGG | + | chr5.2:31247866-31247885 | None:intergenic | 35.0% | |
| TATGGAAACCTATACAGTCA+AGG | - | chr5.2:31246652-31246671 | MS.gene55263:CDS | 35.0% | |
| TTCAAGGTTACAACAAGTGA+TGG | - | chr5.2:31247876-31247895 | MS.gene55263:CDS | 35.0% | |
| TTCCATAACCTTGACTGTAT+AGG | + | chr5.2:31246663-31246682 | None:intergenic | 35.0% | |
| TTGTTGTGTGGATTTGTGTA+GGG | - | chr5.2:31247650-31247669 | MS.gene55263:CDS | 35.0% | |
| ! | ACAAGTTGAAAGTGACATGA+AGG | + | chr5.2:31247029-31247048 | None:intergenic | 35.0% |
| ! | TTGTTCCTGTTTCTTACAGA+AGG | - | chr5.2:31246929-31246948 | MS.gene55263:intron | 35.0% |
| !! | TTATTAGGCAAGGCATTGTT+TGG | + | chr5.2:31246823-31246842 | None:intergenic | 35.0% |
| !!! | TTTTTTTTAGGTGGTGCATG+TGG | - | chr5.2:31246628-31246647 | MS.gene55263:CDS | 35.0% |
| AAGTGATGCATCAGGAACAA+TGG | - | chr5.2:31246504-31246523 | MS.gene55263:CDS | 40.0% | |
| AATAAGTGATGTGTCACGTG+GGG | - | chr5.2:31247506-31247525 | MS.gene55263:CDS | 40.0% | |
| ACAATGGTAGTTCCCTAACA+AGG | + | chr5.2:31247546-31247565 | None:intergenic | 40.0% | |
| AGTGATGCATCAGGAACAAT+GGG | - | chr5.2:31246505-31246524 | MS.gene55263:CDS | 40.0% | |
| ATCTAGCTAGTTAATGGGGT+TGG | - | chr5.2:31247165-31247184 | MS.gene55263:intron | 40.0% | |
| GCTATTAAAGGGTCAAGAAC+AGG | - | chr5.2:31247780-31247799 | MS.gene55263:intron | 40.0% | |
| GGATGCCAATGTCTAGAAAT+TGG | - | chr5.2:31247805-31247824 | MS.gene55263:intron | 40.0% | |
| GTTCTAGTAACAAATGTGGG+TGG | - | chr5.2:31247735-31247754 | MS.gene55263:intron | 40.0% | |
| TCATCTGCTTATGGTTATGG+TGG | - | chr5.2:31246445-31246464 | MS.gene55263:CDS | 40.0% | |
| TGCCTAATAACAATGGAGGA+TGG | - | chr5.2:31246833-31246852 | MS.gene55263:intron | 40.0% | |
| TTGTTAGGGAACTACCATTG+TGG | - | chr5.2:31247545-31247564 | MS.gene55263:CDS | 40.0% | |
| ! | CACCATCCTCCATTGTTATT+AGG | + | chr5.2:31246838-31246857 | None:intergenic | 40.0% |
| ! | TCCTCCATTGTTATTAGGCA+AGG | + | chr5.2:31246833-31246852 | None:intergenic | 40.0% |
| ! | TCTCATTGGGTTGTTCTTCA+TGG | - | chr5.2:31246405-31246424 | MS.gene55263:CDS | 40.0% |
| ! | TGACCCCAATTTCTAGACAT+TGG | + | chr5.2:31247813-31247832 | None:intergenic | 40.0% |
| ! | TTATGGTTATGGTGGAGGAT+GGG | - | chr5.2:31246453-31246472 | MS.gene55263:CDS | 40.0% |
| !! | AGATCAAAGTGTTGCAAAGG+AGG | + | chr5.2:31246865-31246884 | None:intergenic | 40.0% |
| !! | GATCAAAGTGTTGCAAAGGA+GGG | + | chr5.2:31246864-31246883 | None:intergenic | 40.0% |
| !! | GCAAGATCAAAGTGTTGCAA+AGG | + | chr5.2:31246868-31246887 | None:intergenic | 40.0% |
| !! | GTGGTTCTTGCTTTGAGATT+AGG | - | chr5.2:31246731-31246750 | MS.gene55263:intron | 40.0% |
| AGCCAGGAAGACACCATTTA+CGG | + | chr5.2:31246768-31246787 | None:intergenic | 45.0% | |
| GCACATGCAACTTTCTATGG+AGG | - | chr5.2:31246481-31246500 | MS.gene55263:CDS | 45.0% | |
| GCCTTGCCTAATAACAATGG+AGG | - | chr5.2:31246829-31246848 | MS.gene55263:intron | 45.0% | |
| TATGGAGGAAGTGATGCATC+AGG | - | chr5.2:31246496-31246515 | MS.gene55263:CDS | 45.0% | |
| TCTGCTTATGGTTATGGTGG+AGG | - | chr5.2:31246448-31246467 | MS.gene55263:CDS | 45.0% | |
| TGTCACGTGGGGTCTATTTA+AGG | - | chr5.2:31247517-31247536 | MS.gene55263:CDS | 45.0% | |
| TTAAAGGGTCAAGAACAGGG+TGG | - | chr5.2:31247784-31247803 | MS.gene55263:intron | 45.0% | |
| TTAGGTGGTGCATGTGGATA+TGG | - | chr5.2:31246634-31246653 | MS.gene55263:CDS | 45.0% | |
| TTCAACAGTGGTTTGAGCTG+TGG | - | chr5.2:31246712-31246731 | MS.gene55263:intron | 45.0% | |
| ! | CTTATGGTTATGGTGGAGGA+TGG | - | chr5.2:31246452-31246471 | MS.gene55263:CDS | 45.0% |
| ! | TCTTTTGGTCAGACCTACAC+TGG | - | chr5.2:31247939-31247958 | MS.gene55263:CDS | 45.0% |
| ! | TGGCCAAGCTTTGTCTTTCA+AGG | - | chr5.2:31247860-31247879 | MS.gene55263:CDS | 45.0% |
| !! | AGCACAGCTTTGTTCAACAG+TGG | - | chr5.2:31246700-31246719 | MS.gene55263:intron | 45.0% |
| !! | TGCTTTGAGATTAGGTGTGC+TGG | - | chr5.2:31246739-31246758 | MS.gene55263:intron | 45.0% |
| !! | TTAGGCAAGGCATTGTTTGG+TGG | + | chr5.2:31246820-31246839 | None:intergenic | 45.0% |
| !!! | GTGTCTTCCTGGCTCTATTT+TGG | - | chr5.2:31246774-31246793 | MS.gene55263:intron | 45.0% |
| !!! | TTAATATTGAATTTTTTTTT+AGG | - | chr5.2:31246616-31246635 | MS.gene55263:CDS | 5.0% |
| AATTCCTCCCCTTCTTCTGC+AGG | + | chr5.2:31247679-31247698 | None:intergenic | 50.0% | |
| ACCAAAAGACCAACCAGCTG+GGG | + | chr5.2:31247928-31247947 | None:intergenic | 50.0% | |
| ATTCCTCCCCTTCTTCTGCA+GGG | + | chr5.2:31247678-31247697 | None:intergenic | 50.0% | |
| GACCAAAAGACCAACCAGCT+GGG | + | chr5.2:31247929-31247948 | None:intergenic | 50.0% | |
| GACCGTAAATGGTGTCTTCC+TGG | - | chr5.2:31246763-31246782 | MS.gene55263:intron | 50.0% | |
| GCAGAAGAAGGGGAGGAATT+AGG | - | chr5.2:31247679-31247698 | MS.gene55263:CDS | 50.0% | |
| GCAGTGACCAAAATAGAGCC+AGG | + | chr5.2:31246784-31246803 | None:intergenic | 50.0% | |
| GTAACAAATGTGGGTGGTGC+TGG | - | chr5.2:31247741-31247760 | MS.gene55263:intron | 50.0% | |
| TGACCAAAAGACCAACCAGC+TGG | + | chr5.2:31247930-31247949 | None:intergenic | 50.0% | |
| ! | TAGGGTACCCTGCAGAAGAA+GGG | - | chr5.2:31247668-31247687 | MS.gene55263:CDS | 50.0% |
| ACGGAATTGGGCACCAGTGT+AGG | + | chr5.2:31247955-31247974 | None:intergenic | 55.0% | |
| ! | AGGGTACCCTGCAGAAGAAG+GGG | - | chr5.2:31247669-31247688 | MS.gene55263:CDS | 55.0% |
| ! | GGTGTGCTGGTGACCGTAAA+TGG | - | chr5.2:31246752-31246771 | MS.gene55263:intron | 55.0% |
| ! | GTAGGGTACCCTGCAGAAGA+AGG | - | chr5.2:31247667-31247686 | MS.gene55263:CDS | 55.0% |
| ACAATGCTGCCCCAGCTGGT+TGG | - | chr5.2:31247916-31247935 | MS.gene55263:CDS | 60.0% | |
| ACCAGCTGGGGCAGCATTGT+TGG | + | chr5.2:31247916-31247935 | None:intergenic | 60.0% | |
| GTACCCTGCAGAAGAAGGGG+AGG | - | chr5.2:31247672-31247691 | MS.gene55263:CDS | 60.0% | |
| TCCAACAATGCTGCCCCAGC+TGG | - | chr5.2:31247912-31247931 | MS.gene55263:CDS | 60.0% | |
| !!! | GCCCCAGCTGGTTGGTCTTT+TGG | - | chr5.2:31247924-31247943 | MS.gene55263:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 31246400 | 31247977 | 31246400 | ID=MS.gene55263 |
| chr5.2 | mRNA | 31246400 | 31247977 | 31246400 | ID=MS.gene55263.t1;Parent=MS.gene55263 |
| chr5.2 | exon | 31247851 | 31247977 | 31247851 | ID=MS.gene55263.t1.exon1;Parent=MS.gene55263.t1 |
| chr5.2 | CDS | 31247851 | 31247977 | 31247851 | ID=cds.MS.gene55263.t1;Parent=MS.gene55263.t1 |
| chr5.2 | exon | 31247427 | 31247739 | 31247427 | ID=MS.gene55263.t1.exon2;Parent=MS.gene55263.t1 |
| chr5.2 | CDS | 31247427 | 31247739 | 31247427 | ID=cds.MS.gene55263.t1;Parent=MS.gene55263.t1 |
| chr5.2 | exon | 31246400 | 31246706 | 31246400 | ID=MS.gene55263.t1.exon3;Parent=MS.gene55263.t1 |
| chr5.2 | CDS | 31246400 | 31246706 | 31246400 | ID=cds.MS.gene55263.t1;Parent=MS.gene55263.t1 |
| Gene Sequence |
| Protein sequence |
