Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60174.t1 | XP_024636092.1 | 97.6 | 659 | 13 | 2 | 1 | 657 | 1 | 658 | 0.00E+00 | 1245 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60174.t1 | Q38914 | 53.4 | 494 | 141 | 13 | 67 | 530 | 65 | 499 | 1.2e-115 | 418.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60174.t1 | A0A396IBY7 | 97.6 | 659 | 13 | 2 | 1 | 657 | 1 | 658 | 0.0e+00 | 1245.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene60174.t1 | TF | AP2/ERF-AP2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene60174 | 0.816657 | 4.94E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene60174 | 0.852104 | 5.75E-61 | -1.69E-46 |
| MS.gene049672 | MS.gene60174 | 0.834962 | 2.21E-56 | -1.69E-46 |
| MS.gene049711 | MS.gene60174 | 0.848312 | 6.64E-60 | -1.69E-46 |
| MS.gene049807 | MS.gene60174 | 0.81498 | 1.17E-51 | -1.69E-46 |
| MS.gene049824 | MS.gene60174 | 0.822222 | 2.66E-53 | -1.69E-46 |
| MS.gene049825 | MS.gene60174 | 0.814573 | 1.44E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene60174 | 0.836457 | 9.25E-57 | -1.69E-46 |
| MS.gene050156 | MS.gene60174 | 0.813359 | 2.66E-51 | -1.69E-46 |
| MS.gene05045 | MS.gene60174 | 0.83006 | 3.63E-55 | -1.69E-46 |
| MS.gene050901 | MS.gene60174 | 0.80188 | 7.31E-49 | -1.69E-46 |
| MS.gene051018 | MS.gene60174 | 0.841394 | 4.88E-58 | -1.69E-46 |
| MS.gene051247 | MS.gene60174 | 0.820863 | 5.48E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene60174 | 0.811697 | 6.15E-51 | -1.69E-46 |
| MS.gene051664 | MS.gene60174 | 0.832748 | 7.92E-56 | -1.69E-46 |
| MS.gene051700 | MS.gene60174 | 0.812665 | 3.78E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene60174 | 0.860729 | 1.69E-63 | -1.69E-46 |
| MS.gene051720 | MS.gene60174 | 0.849883 | 2.43E-60 | -1.69E-46 |
| MS.gene051744 | MS.gene60174 | 0.839646 | 1.40E-57 | -1.69E-46 |
| MS.gene051957 | MS.gene60174 | 0.828405 | 9.16E-55 | -1.69E-46 |
| MS.gene052000 | MS.gene60174 | 0.832821 | 7.60E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene60174 | 0.822533 | 2.25E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene60174 | 0.817277 | 3.59E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene60174 | 0.807906 | 4.02E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene60174 | 0.808807 | 2.58E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene60174 | 0.826259 | 2.99E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene60174 | 0.801489 | 8.79E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene60174 | 0.816646 | 4.97E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene60174 | 0.844233 | 8.58E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene60174 | 0.840048 | 1.10E-57 | -1.69E-46 |
| MS.gene053536 | MS.gene60174 | 0.836228 | 1.06E-56 | -1.69E-46 |
| MS.gene053538 | MS.gene60174 | 0.840864 | 6.73E-58 | -1.69E-46 |
| MS.gene053540 | MS.gene60174 | 0.830337 | 3.11E-55 | -1.69E-46 |
| MS.gene053581 | MS.gene60174 | 0.820147 | 8.00E-53 | -1.69E-46 |
| MS.gene053597 | MS.gene60174 | 0.803856 | 2.85E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene60174 | 0.828063 | 1.11E-54 | -1.69E-46 |
| MS.gene053883 | MS.gene60174 | 0.802058 | 6.72E-49 | -1.69E-46 |
| MS.gene053900 | MS.gene60174 | 0.813986 | 1.94E-51 | -1.69E-46 |
| MS.gene054142 | MS.gene60174 | 0.836222 | 1.06E-56 | -1.69E-46 |
| MS.gene054584 | MS.gene60174 | 0.841317 | 5.11E-58 | -1.69E-46 |
| MS.gene054651 | MS.gene60174 | 0.827419 | 1.58E-54 | -1.69E-46 |
| MS.gene054991 | MS.gene60174 | 0.814534 | 1.47E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene60174 | 0.845852 | 3.14E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene60174 | 0.854308 | 1.34E-61 | -1.69E-46 |
| MS.gene055468 | MS.gene60174 | 0.833786 | 4.37E-56 | -1.69E-46 |
| MS.gene055537 | MS.gene60174 | 0.849735 | 2.67E-60 | -1.69E-46 |
| MS.gene055580 | MS.gene60174 | -0.841739 | 3.96E-58 | -1.69E-46 |
| MS.gene055589 | MS.gene60174 | 0.802433 | 5.62E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene60174 | 0.804139 | 2.49E-49 | -1.69E-46 |
| MS.gene056005 | MS.gene60174 | 0.827113 | 1.87E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene60174 | -0.811333 | 7.38E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene60174 | 0.800872 | 1.18E-48 | -1.69E-46 |
| MS.gene056169 | MS.gene60174 | 0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene056215 | MS.gene60174 | 0.80424 | 2.38E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene60174 | 0.804135 | 2.50E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene60174 | 0.802645 | 5.09E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene60174 | 0.81304 | 3.13E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene60174 | 0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene057132 | MS.gene60174 | 0.801432 | 9.03E-49 | -1.69E-46 |
| MS.gene057294 | MS.gene60174 | 0.805306 | 1.42E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene60174 | 0.819858 | 9.31E-53 | -1.69E-46 |
| MS.gene058339 | MS.gene60174 | 0.80132 | 9.52E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene60174 | 0.821497 | 3.91E-53 | -1.69E-46 |
| MS.gene058668 | MS.gene60174 | 0.819739 | 9.92E-53 | -1.69E-46 |
| MS.gene05894 | MS.gene60174 | 0.832165 | 1.10E-55 | -1.69E-46 |
| MS.gene059015 | MS.gene60174 | 0.829267 | 5.66E-55 | -1.69E-46 |
| MS.gene059424 | MS.gene60174 | 0.817344 | 3.46E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene60174 | 0.83405 | 3.75E-56 | -1.69E-46 |
| MS.gene060519 | MS.gene60174 | 0.827452 | 1.55E-54 | -1.69E-46 |
| MS.gene060587 | MS.gene60174 | 0.817713 | 2.86E-52 | -1.69E-46 |
| MS.gene06094 | MS.gene60174 | 0.812573 | 3.96E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60174.t1 | MTR_4g097520 | 97.117 | 659 | 13 | 3 | 1 | 657 | 1 | 655 | 0.0 | 1332 |
| MS.gene60174.t1 | MTR_3g103460 | 52.822 | 691 | 257 | 24 | 1 | 656 | 1 | 657 | 0.0 | 558 |
| MS.gene60174.t1 | MTR_1g017400 | 51.089 | 689 | 276 | 22 | 1 | 657 | 1 | 660 | 0.0 | 535 |
| MS.gene60174.t1 | MTR_5g015070 | 48.834 | 686 | 180 | 29 | 1 | 657 | 1 | 544 | 1.44e-171 | 501 |
| MS.gene60174.t1 | MTR_8g020510 | 46.964 | 494 | 181 | 11 | 18 | 495 | 3 | 431 | 4.58e-126 | 385 |
| MS.gene60174.t1 | MTR_4g065370 | 58.805 | 318 | 105 | 6 | 248 | 561 | 121 | 416 | 5.25e-116 | 358 |
| MS.gene60174.t1 | MTR_4g127930 | 73.394 | 218 | 58 | 0 | 293 | 510 | 143 | 360 | 2.13e-115 | 355 |
| MS.gene60174.t1 | MTR_7g080460 | 79.208 | 202 | 42 | 0 | 298 | 499 | 248 | 449 | 2.05e-111 | 350 |
| MS.gene60174.t1 | MTR_2g098180 | 67.470 | 249 | 74 | 3 | 300 | 542 | 158 | 405 | 1.80e-110 | 343 |
| MS.gene60174.t1 | MTR_8g068510 | 60.232 | 259 | 85 | 5 | 240 | 494 | 69 | 313 | 8.30e-98 | 306 |
| MS.gene60174.t1 | MTR_5g031880 | 80.108 | 186 | 34 | 1 | 300 | 485 | 215 | 397 | 7.73e-95 | 302 |
| MS.gene60174.t1 | MTR_4g130270 | 71.598 | 169 | 48 | 0 | 308 | 476 | 46 | 214 | 1.80e-84 | 270 |
| MS.gene60174.t1 | MTR_7g009410 | 62.366 | 186 | 66 | 2 | 291 | 476 | 48 | 229 | 7.86e-75 | 246 |
| MS.gene60174.t1 | MTR_2g460730 | 62.189 | 201 | 61 | 3 | 278 | 476 | 24 | 211 | 2.23e-74 | 243 |
| MS.gene60174.t1 | MTR_6g011490 | 63.102 | 187 | 66 | 1 | 290 | 476 | 42 | 225 | 1.29e-73 | 241 |
| MS.gene60174.t1 | MTR_8g044070 | 62.570 | 179 | 63 | 2 | 308 | 486 | 54 | 228 | 1.43e-71 | 238 |
| MS.gene60174.t1 | MTR_8g468920 | 51.822 | 247 | 114 | 3 | 262 | 508 | 23 | 264 | 3.64e-71 | 236 |
| MS.gene60174.t1 | MTR_4g007770 | 68.639 | 169 | 50 | 1 | 308 | 476 | 35 | 200 | 6.93e-71 | 233 |
| MS.gene60174.t1 | MTR_8g044040 | 49.597 | 248 | 115 | 4 | 308 | 555 | 55 | 292 | 2.51e-67 | 226 |
| MS.gene60174.t1 | MTR_4g094868 | 54.762 | 168 | 65 | 3 | 312 | 479 | 176 | 332 | 3.83e-45 | 169 |
| MS.gene60174.t1 | MTR_4g094868 | 54.762 | 168 | 65 | 3 | 312 | 479 | 176 | 332 | 3.96e-45 | 169 |
| MS.gene60174.t1 | MTR_5g016810 | 54.762 | 168 | 65 | 3 | 312 | 479 | 152 | 308 | 2.58e-44 | 166 |
| MS.gene60174.t1 | MTR_4g061200 | 50.857 | 175 | 75 | 3 | 312 | 486 | 131 | 294 | 1.57e-43 | 161 |
| MS.gene60174.t1 | MTR_4g061200 | 50.857 | 175 | 75 | 3 | 312 | 486 | 131 | 294 | 1.47e-42 | 160 |
| MS.gene60174.t1 | MTR_7g100590 | 51.786 | 168 | 70 | 3 | 312 | 479 | 139 | 295 | 2.20e-42 | 160 |
| MS.gene60174.t1 | MTR_2g093060 | 52.381 | 168 | 69 | 3 | 312 | 479 | 134 | 290 | 4.79e-42 | 159 |
| MS.gene60174.t1 | MTR_2g093060 | 52.381 | 168 | 69 | 3 | 312 | 479 | 134 | 290 | 5.29e-42 | 159 |
| MS.gene60174.t1 | MTR_5g016810 | 52.299 | 174 | 66 | 4 | 312 | 479 | 152 | 314 | 1.17e-41 | 159 |
| MS.gene60174.t1 | MTR_7g091390 | 63.077 | 130 | 40 | 2 | 307 | 436 | 55 | 176 | 7.70e-41 | 154 |
| MS.gene60174.t1 | MTR_4g094868 | 56.204 | 137 | 59 | 1 | 343 | 479 | 41 | 176 | 2.38e-37 | 143 |
| MS.gene60174.t1 | MTR_4g061200 | 46.857 | 175 | 67 | 4 | 312 | 486 | 131 | 279 | 2.36e-35 | 138 |
| MS.gene60174.t1 | MTR_4g061200 | 46.857 | 175 | 67 | 4 | 312 | 486 | 131 | 279 | 2.18e-34 | 137 |
| MS.gene60174.t1 | MTR_2g093060 | 48.214 | 168 | 61 | 4 | 312 | 479 | 134 | 275 | 6.35e-34 | 135 |
| MS.gene60174.t1 | MTR_7g061190 | 48.252 | 143 | 73 | 1 | 344 | 486 | 3 | 144 | 8.00e-30 | 115 |
| MS.gene60174.t1 | MTR_7g091390 | 63.736 | 91 | 28 | 1 | 346 | 436 | 3 | 88 | 1.65e-24 | 105 |
| MS.gene60174.t1 | MTR_1g049140 | 40.972 | 144 | 74 | 3 | 288 | 431 | 113 | 245 | 9.61e-20 | 89.7 |
| MS.gene60174.t1 | MTR_1g049140 | 40.972 | 144 | 74 | 3 | 288 | 431 | 113 | 245 | 1.52e-19 | 91.7 |
| MS.gene60174.t1 | MTR_1g049140 | 40.972 | 144 | 74 | 3 | 288 | 431 | 113 | 245 | 6.09e-19 | 89.4 |
| MS.gene60174.t1 | MTR_3g090510 | 47.170 | 106 | 55 | 1 | 350 | 455 | 163 | 267 | 7.52e-19 | 89.7 |
| MS.gene60174.t1 | MTR_7g060560 | 44.340 | 106 | 57 | 2 | 350 | 455 | 156 | 259 | 2.02e-15 | 79.0 |
| MS.gene60174.t1 | MTR_1g090290 | 36.207 | 116 | 62 | 4 | 265 | 380 | 69 | 172 | 1.13e-11 | 64.7 |
| MS.gene60174.t1 | MTR_1g028560 | 49.315 | 73 | 36 | 1 | 399 | 471 | 99 | 170 | 2.10e-11 | 66.2 |
| MS.gene60174.t1 | MTR_4g086190 | 35.514 | 107 | 64 | 3 | 415 | 518 | 96 | 200 | 3.44e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60174.t1 | AT4G37750 | 52.698 | 556 | 170 | 18 | 1 | 525 | 1 | 494 | 3.55e-161 | 474 |
| MS.gene60174.t1 | AT1G72570 | 72.951 | 244 | 63 | 2 | 252 | 494 | 164 | 405 | 2.08e-123 | 372 |
| MS.gene60174.t1 | AT5G57390 | 84.574 | 188 | 28 | 1 | 300 | 487 | 73 | 259 | 1.09e-114 | 351 |
| MS.gene60174.t1 | AT1G51190 | 65.900 | 261 | 84 | 3 | 248 | 506 | 128 | 385 | 1.19e-114 | 355 |
| MS.gene60174.t1 | AT3G20840 | 66.540 | 263 | 59 | 4 | 248 | 499 | 125 | 369 | 6.76e-114 | 353 |
| MS.gene60174.t1 | AT5G57390 | 84.574 | 188 | 28 | 1 | 300 | 487 | 191 | 377 | 9.27e-114 | 353 |
| MS.gene60174.t1 | AT5G17430 | 64.338 | 272 | 92 | 2 | 300 | 571 | 136 | 402 | 2.01e-111 | 345 |
| MS.gene60174.t1 | AT5G17430 | 64.338 | 272 | 92 | 2 | 300 | 571 | 198 | 464 | 5.82e-111 | 346 |
| MS.gene60174.t1 | AT5G65510 | 70.423 | 213 | 63 | 0 | 285 | 497 | 146 | 358 | 2.10e-95 | 301 |
| MS.gene60174.t1 | AT5G65510 | 70.423 | 213 | 63 | 0 | 285 | 497 | 204 | 416 | 2.58e-95 | 303 |
| MS.gene60174.t1 | AT5G65510 | 70.423 | 213 | 63 | 0 | 285 | 497 | 204 | 416 | 2.58e-95 | 303 |
| MS.gene60174.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 203 | 403 | 1.69e-94 | 302 |
| MS.gene60174.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 203 | 403 | 1.69e-94 | 302 |
| MS.gene60174.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 241 | 441 | 2.84e-94 | 303 |
| MS.gene60174.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 241 | 441 | 2.84e-94 | 303 |
| MS.gene60174.t1 | AT5G10510 | 74.129 | 201 | 52 | 0 | 285 | 485 | 226 | 426 | 2.89e-94 | 302 |
| MS.gene60174.t1 | AT5G10510 | 72.637 | 201 | 52 | 1 | 285 | 485 | 203 | 400 | 5.46e-90 | 290 |
| MS.gene60174.t1 | AT5G10510 | 66.063 | 221 | 55 | 1 | 285 | 485 | 241 | 461 | 4.84e-87 | 284 |
| MS.gene60174.t1 | AT5G65510 | 73.292 | 161 | 43 | 0 | 285 | 445 | 146 | 306 | 2.09e-83 | 265 |
| MS.gene60174.t1 | AT3G54320 | 69.822 | 169 | 51 | 0 | 308 | 476 | 61 | 229 | 7.06e-73 | 241 |
| MS.gene60174.t1 | AT3G54320 | 69.822 | 169 | 51 | 0 | 308 | 476 | 61 | 229 | 8.85e-73 | 241 |
| MS.gene60174.t1 | AT1G79700 | 69.231 | 169 | 52 | 0 | 308 | 476 | 48 | 216 | 6.84e-67 | 222 |
| MS.gene60174.t1 | AT1G16060 | 68.208 | 173 | 55 | 0 | 304 | 476 | 50 | 222 | 2.48e-65 | 219 |
| MS.gene60174.t1 | AT1G79700 | 65.089 | 169 | 49 | 1 | 308 | 476 | 48 | 206 | 3.96e-59 | 201 |
| MS.gene60174.t1 | AT3G54320 | 70.992 | 131 | 38 | 0 | 346 | 476 | 33 | 163 | 3.87e-53 | 187 |
| MS.gene60174.t1 | AT3G54320 | 70.992 | 131 | 38 | 0 | 346 | 476 | 33 | 163 | 3.87e-53 | 187 |
| MS.gene60174.t1 | AT1G79700 | 68.702 | 131 | 41 | 0 | 346 | 476 | 10 | 140 | 1.89e-45 | 162 |
| MS.gene60174.t1 | AT4G36920 | 43.548 | 248 | 108 | 5 | 236 | 479 | 68 | 287 | 2.21e-45 | 167 |
| MS.gene60174.t1 | AT4G36920 | 43.548 | 248 | 108 | 5 | 236 | 479 | 68 | 287 | 2.21e-45 | 167 |
| MS.gene60174.t1 | AT2G41710 | 57.895 | 152 | 56 | 2 | 285 | 436 | 46 | 189 | 8.23e-45 | 166 |
| MS.gene60174.t1 | AT5G67180 | 50.282 | 177 | 77 | 3 | 312 | 488 | 96 | 261 | 1.18e-44 | 161 |
| MS.gene60174.t1 | AT1G16060 | 68.421 | 133 | 42 | 0 | 344 | 476 | 20 | 152 | 1.41e-44 | 160 |
| MS.gene60174.t1 | AT2G41710 | 57.895 | 152 | 56 | 2 | 285 | 436 | 46 | 189 | 1.62e-44 | 166 |
| MS.gene60174.t1 | AT5G67180 | 50.562 | 178 | 77 | 3 | 312 | 489 | 96 | 262 | 1.70e-44 | 161 |
| MS.gene60174.t1 | AT5G67180 | 50.562 | 178 | 77 | 3 | 312 | 489 | 96 | 262 | 3.60e-44 | 162 |
| MS.gene60174.t1 | AT1G79700 | 67.442 | 129 | 42 | 0 | 348 | 476 | 6 | 134 | 1.52e-43 | 156 |
| MS.gene60174.t1 | AT2G41710 | 56.051 | 157 | 56 | 3 | 285 | 436 | 46 | 194 | 2.09e-42 | 159 |
| MS.gene60174.t1 | AT2G28550 | 44.298 | 228 | 93 | 8 | 312 | 529 | 153 | 356 | 1.86e-41 | 157 |
| MS.gene60174.t1 | AT2G41710 | 61.983 | 121 | 41 | 1 | 316 | 436 | 109 | 224 | 4.20e-38 | 147 |
| MS.gene60174.t1 | AT2G28550 | 51.064 | 141 | 58 | 3 | 312 | 452 | 153 | 282 | 8.21e-35 | 135 |
| MS.gene60174.t1 | AT5G67180 | 50.000 | 146 | 62 | 3 | 312 | 457 | 96 | 230 | 6.30e-34 | 130 |
| MS.gene60174.t1 | AT2G28550 | 41.228 | 228 | 85 | 9 | 312 | 529 | 153 | 341 | 1.98e-33 | 134 |
| MS.gene60174.t1 | AT3G54320 | 72.727 | 88 | 24 | 0 | 389 | 476 | 1 | 88 | 8.18e-32 | 125 |
| MS.gene60174.t1 | AT1G16060 | 70.455 | 88 | 26 | 0 | 389 | 476 | 1 | 88 | 6.16e-31 | 120 |
| MS.gene60174.t1 | AT1G16060 | 70.455 | 88 | 26 | 0 | 389 | 476 | 1 | 88 | 6.16e-31 | 120 |
| MS.gene60174.t1 | AT1G16060 | 70.455 | 88 | 26 | 0 | 389 | 476 | 1 | 88 | 6.16e-31 | 120 |
| MS.gene60174.t1 | AT1G16060 | 70.455 | 88 | 26 | 0 | 389 | 476 | 1 | 88 | 6.16e-31 | 120 |
| MS.gene60174.t1 | AT2G28550 | 51.181 | 127 | 51 | 3 | 312 | 438 | 153 | 268 | 2.02e-30 | 121 |
| MS.gene60174.t1 | AT2G28550 | 51.181 | 127 | 51 | 3 | 312 | 438 | 153 | 268 | 2.02e-30 | 121 |
| MS.gene60174.t1 | AT2G39250 | 44.643 | 112 | 52 | 2 | 313 | 424 | 109 | 210 | 6.87e-27 | 110 |
| MS.gene60174.t1 | AT2G39250 | 40.909 | 132 | 68 | 2 | 293 | 424 | 89 | 210 | 2.52e-26 | 110 |
| MS.gene60174.t1 | AT5G60120 | 47.287 | 129 | 57 | 3 | 309 | 437 | 157 | 274 | 2.74e-23 | 103 |
| MS.gene60174.t1 | AT5G60120 | 47.287 | 129 | 57 | 3 | 309 | 437 | 157 | 274 | 2.74e-23 | 103 |
| MS.gene60174.t1 | AT5G60120 | 47.287 | 129 | 57 | 3 | 309 | 437 | 157 | 274 | 2.74e-23 | 103 |
| MS.gene60174.t1 | AT5G60120 | 41.615 | 161 | 68 | 5 | 309 | 469 | 157 | 291 | 3.55e-23 | 103 |
| MS.gene60174.t1 | AT2G28550 | 38.660 | 194 | 80 | 7 | 346 | 529 | 11 | 175 | 3.78e-23 | 100 |
| MS.gene60174.t1 | AT5G60120 | 41.615 | 161 | 68 | 5 | 309 | 469 | 157 | 291 | 4.70e-23 | 103 |
| MS.gene60174.t1 | AT5G60120 | 41.615 | 161 | 68 | 5 | 309 | 469 | 157 | 291 | 5.63e-23 | 103 |
| MS.gene60174.t1 | AT3G54990 | 48.598 | 107 | 45 | 2 | 312 | 418 | 122 | 218 | 6.19e-22 | 95.9 |
| MS.gene60174.t1 | AT3G54990 | 48.598 | 107 | 45 | 2 | 312 | 418 | 122 | 218 | 3.74e-21 | 95.9 |
| MS.gene60174.t1 | AT1G16060 | 77.193 | 57 | 13 | 0 | 420 | 476 | 10 | 66 | 4.27e-16 | 77.4 |
| MS.gene60174.t1 | AT1G03800 | 53.226 | 62 | 28 | 1 | 415 | 476 | 53 | 113 | 8.50e-12 | 66.2 |
| MS.gene60174.t1 | AT5G65130 | 34.752 | 141 | 68 | 5 | 383 | 500 | 72 | 211 | 8.32e-11 | 63.9 |
| MS.gene60174.t1 | AT5G65130 | 34.752 | 141 | 68 | 5 | 383 | 500 | 74 | 213 | 9.57e-11 | 63.5 |
Find 105 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATAGTAATTTGAATTCT+TGG | 0.209522 | 8.2:-24575369 | MS.gene60174:CDS |
| CAAGAATTCAAATTACTATT+TGG | 0.219550 | 8.2:+24575370 | None:intergenic |
| AGTAACTATTGTTACTCTTA+TGG | 0.248617 | 8.2:-24578317 | MS.gene60174:CDS |
| AGGAAATCTATTGATACTTT+TGG | 0.282332 | 8.2:-24577519 | MS.gene60174:CDS |
| TTCAACAGCTTCAAAACTAT+TGG | 0.285703 | 8.2:-24575404 | MS.gene60174:CDS |
| AATATTGGTTCAATGGCTTA+TGG | 0.295832 | 8.2:-24577699 | MS.gene60174:CDS |
| GGAGATATGAAGCTCATCTA+TGG | 0.306792 | 8.2:-24577336 | MS.gene60174:CDS |
| CTTCACCCATGTTTGATTGA+TGG | 0.312766 | 8.2:+24577841 | None:intergenic |
| GGGACCCTTCACAACATCTT+AGG | 0.319809 | 8.2:-24575348 | MS.gene60174:CDS |
| ATAAGCCATTGAACCAATAT+TGG | 0.320548 | 8.2:+24577701 | None:intergenic |
| AATTTCAATGCAGAAGAATA+TGG | 0.321865 | 8.2:-24575671 | MS.gene60174:CDS |
| AACCATGAGTTGATGTTAGA+AGG | 0.326730 | 8.2:-24577897 | MS.gene60174:CDS |
| GTTCTTTCATTCTCAAATCT+TGG | 0.331942 | 8.2:+24575604 | None:intergenic |
| CTGTTGAAGTTGTTGATGTT+GGG | 0.335268 | 8.2:+24575633 | None:intergenic |
| TCTCCTCAAATGAATAATAT+TGG | 0.338994 | 8.2:-24578443 | MS.gene60174:CDS |
| ACATTAACAATGAAAATAAC+TGG | 0.340271 | 8.2:-24578481 | MS.gene60174:CDS |
| AAATAGTAATTTGAATTCTT+GGG | 0.341154 | 8.2:-24575368 | MS.gene60174:CDS |
| GACTTAGTGGTTTAAAGAAC+TGG | 0.346259 | 8.2:-24577812 | MS.gene60174:CDS |
| ATCAGATTTGAGAGGCATAA+TGG | 0.354338 | 8.2:+24578256 | None:intergenic |
| TCAAGCAGCACTCAAGTATT+GGG | 0.359648 | 8.2:-24576800 | MS.gene60174:CDS |
| CTTGCCATCTTCCATGTTGA+TGG | 0.372286 | 8.2:+24576326 | None:intergenic |
| GGTAATAAAGATCTATATCT+TGG | 0.375013 | 8.2:-24576283 | MS.gene60174:CDS |
| AAAGAAGGCCAAAGCAGAAA+AGG | 0.375414 | 8.2:-24577298 | MS.gene60174:CDS |
| TGTATCAAATGCTTCTTCAT+TGG | 0.379502 | 8.2:-24575500 | MS.gene60174:CDS |
| TGATGGATCTCTTTATGAAA+TGG | 0.383299 | 8.2:-24578237 | MS.gene60174:CDS |
| TCTGTTGAAGTTGTTGATGT+TGG | 0.394185 | 8.2:+24575632 | None:intergenic |
| AGCAGAAGCAAATTGTTCAT+AGG | 0.397213 | 8.2:-24577539 | MS.gene60174:CDS |
| TGATGAGACACAGTTTATCT+TGG | 0.408484 | 8.2:-24576991 | MS.gene60174:intron |
| AACAATGAAAATAACTGGTT+AGG | 0.421756 | 8.2:-24578476 | MS.gene60174:CDS |
| TGGATCCAATATTGGTTCAA+TGG | 0.423285 | 8.2:-24577706 | MS.gene60174:CDS |
| GGTGAAGATCATGGACTTAG+TGG | 0.425302 | 8.2:-24577825 | MS.gene60174:CDS |
| TCAGATTTGAGAGGCATAAT+GGG | 0.436788 | 8.2:+24578257 | None:intergenic |
| TTTATTAGGCATAGGTGGAC+TGG | 0.438736 | 8.2:-24577358 | MS.gene60174:intron |
| ATCAAGCAGCACTCAAGTAT+TGG | 0.444500 | 8.2:-24576801 | MS.gene60174:CDS |
| ACACCAATATTATTCATTTG+AGG | 0.447211 | 8.2:+24578440 | None:intergenic |
| TATAATATGACAACTGTTGT+TGG | 0.447627 | 8.2:+24577934 | None:intergenic |
| TCAACATTGAACAAGCTAGA+AGG | 0.451377 | 8.2:-24575783 | MS.gene60174:CDS |
| GGTGAATGTGGATCCAATAT+TGG | 0.454709 | 8.2:-24577714 | MS.gene60174:CDS |
| GGAAGATGGCAAGCTCGAAT+TGG | 0.460222 | 8.2:-24576316 | MS.gene60174:CDS |
| CCTTGTTACTCCTCTGTACA+TGG | 0.462036 | 8.2:+24576466 | None:intergenic |
| ACAAGCTTGCAAAATCTCTC+TGG | 0.463000 | 8.2:-24575436 | MS.gene60174:CDS |
| TGTTGAAAATTCTGTTGCTA+TGG | 0.468546 | 8.2:-24577592 | MS.gene60174:CDS |
| TCAAACATGGGTGAAGATCA+TGG | 0.480026 | 8.2:-24577834 | MS.gene60174:CDS |
| CAAAGAACATCTCAATATAG+AGG | 0.486736 | 8.2:-24577495 | MS.gene60174:CDS |
| ATGAAATGGAAGCTCTTAGC+AGG | 0.491080 | 8.2:-24578223 | MS.gene60174:CDS |
| AATATGTTGCTCATTTAAGA+AGG | 0.492255 | 8.2:-24576591 | MS.gene60174:intron |
| GAGAGAAAATATGAAGAGAA+TGG | 0.493769 | 8.2:-24578525 | None:intergenic |
| CAAAGCAGAAAAGGAAGACA+AGG | 0.499730 | 8.2:-24577289 | MS.gene60174:intron |
| CTGGCATCTGAGGCAAAGAA+AGG | 0.499839 | 8.2:+24575320 | None:intergenic |
| GCTCGAATTGGTAGAGTAGC+TGG | 0.499873 | 8.2:-24576304 | MS.gene60174:CDS |
| GAGTAACAATAGTTACTAAG+AGG | 0.502157 | 8.2:+24578323 | None:intergenic |
| TGATCATGTCCATGACTAGC+TGG | 0.509563 | 8.2:+24577774 | None:intergenic |
| GGACTTGAACATGAAAATGC+TGG | 0.514334 | 8.2:-24578296 | MS.gene60174:CDS |
| TTGTTGTCATATGCAGAAGA+AGG | 0.522088 | 8.2:+24575709 | None:intergenic |
| TAGCTTGTTCAATGTTGAGA+AGG | 0.523772 | 8.2:+24575788 | None:intergenic |
| AATGAAGAATATGACAAGAC+AGG | 0.524291 | 8.2:-24576614 | MS.gene60174:CDS |
| TTATTAGGCATAGGTGGACT+GGG | 0.524849 | 8.2:-24577357 | MS.gene60174:intron |
| TGGTAAAAGCTTGCTTGAAG+TGG | 0.527376 | 8.2:+24578353 | None:intergenic |
| GCAGAAGCAGAAGCAGAAGA+AGG | 0.529348 | 8.2:+24578389 | None:intergenic |
| GTACTACTACATGCATAATG+AGG | 0.531601 | 8.2:+24578026 | None:intergenic |
| ATTATGCCTCTCAAATCTGA+TGG | 0.532902 | 8.2:-24578254 | MS.gene60174:CDS |
| AAGCAAAGTCAAACTTCAAG+TGG | 0.535525 | 8.2:-24577870 | MS.gene60174:CDS |
| GACACCATCAACATGGAAGA+TGG | 0.537820 | 8.2:-24576330 | MS.gene60174:CDS |
| ACCCTTCTAACATCAACTCA+TGG | 0.539230 | 8.2:+24577895 | None:intergenic |
| ACCATGAGTTGATGTTAGAA+GGG | 0.549490 | 8.2:-24577896 | MS.gene60174:CDS |
| TACTACTACATGCATAATGA+GGG | 0.551148 | 8.2:+24578027 | None:intergenic |
| GCTATGGATACAAAGAAAAG+AGG | 0.553448 | 8.2:-24577576 | MS.gene60174:CDS |
| AATTGTTTATTAGGCATAGG+TGG | 0.555057 | 8.2:-24577363 | MS.gene60174:intron |
| TGGCATCTGAGGCAAAGAAA+GGG | 0.555089 | 8.2:+24575321 | None:intergenic |
| GATGATTGTTCCTGTTGTAG+AGG | 0.558499 | 8.2:-24577745 | MS.gene60174:CDS |
| TTGAAGTTGTTGATGTTGGG+AGG | 0.565145 | 8.2:+24575636 | None:intergenic |
| ACTTAGTGGTTTAAAGAACT+GGG | 0.566240 | 8.2:-24577811 | MS.gene60174:CDS |
| GACAACAGTTGCAAGAAAGA+AGG | 0.566962 | 8.2:-24577313 | MS.gene60174:CDS |
| AAATTTCCATCAATCAAACA+TGG | 0.572921 | 8.2:-24577847 | MS.gene60174:CDS |
| GGGAAGTTTATGTGAGTGGA+TGG | 0.574919 | 8.2:+24576775 | None:intergenic |
| AACAGGGAAGTTTATGTGAG+TGG | 0.577161 | 8.2:+24576771 | None:intergenic |
| ACACAGCTAGACTGAGAGCT+AGG | 0.578119 | 8.2:+24577645 | None:intergenic |
| GAGATATGAAGCTCATCTAT+GGG | 0.580404 | 8.2:-24577335 | MS.gene60174:CDS |
| AGTTTGAGCAGTTCAAGAGA+AGG | 0.582795 | 8.2:-24575472 | MS.gene60174:CDS |
| GAAGGCCTAAGATGTTGTGA+AGG | 0.585697 | 8.2:+24575343 | None:intergenic |
| GAGGAAAATGAAGGTGAATG+TGG | 0.588553 | 8.2:-24577726 | MS.gene60174:CDS |
| AAAAGCAGTGGATTCTCAAG+AGG | 0.594604 | 8.2:-24576494 | MS.gene60174:CDS |
| AAAGCAGTGGATTCTCAAGA+GGG | 0.594710 | 8.2:-24576493 | MS.gene60174:CDS |
| CTCAATATAGAGGTGTAACA+AGG | 0.612520 | 8.2:-24577485 | MS.gene60174:intron |
| GTTTCATCAAGAAGTAGTTG+AGG | 0.620030 | 8.2:-24575545 | MS.gene60174:CDS |
| AACATGCTGTCTAAGCTCAA+AGG | 0.623476 | 8.2:+24577987 | None:intergenic |
| AAATTATCAAAATCAACTTG+AGG | 0.631469 | 8.2:-24576638 | MS.gene60174:CDS |
| GGTAGCAGACACCATCAACA+TGG | 0.639807 | 8.2:-24576337 | MS.gene60174:intron |
| CCATGTACAGAGGAGTAACA+AGG | 0.640756 | 8.2:-24576466 | MS.gene60174:intron |
| ATTGCAGCTATAAAATTCAG+AGG | 0.642745 | 8.2:-24575877 | MS.gene60174:CDS |
| AATTTCCATCAATCAAACAT+GGG | 0.644018 | 8.2:-24577846 | MS.gene60174:CDS |
| ATCTGAGGCAAAGAAAGGGA+AGG | 0.647053 | 8.2:+24575325 | None:intergenic |
| AGTTACTAAGAGGAGAAGAG+TGG | 0.647916 | 8.2:+24578333 | None:intergenic |
| AAGGCCTAAGATGTTGTGAA+GGG | 0.651408 | 8.2:+24575344 | None:intergenic |
| CCTGTTGTAGAGGAAAATGA+AGG | 0.654487 | 8.2:-24577735 | MS.gene60174:CDS |
| CAAGCAGCACTCAAGTATTG+GGG | 0.655625 | 8.2:-24576799 | MS.gene60174:CDS |
| AGAGATCCATCAGATTTGAG+AGG | 0.660630 | 8.2:+24578248 | None:intergenic |
| AGCTAGAAGGAACAAAGAGG+TGG | 0.670383 | 8.2:-24575770 | MS.gene60174:CDS |
| AAGCAGTGGATTCTCAAGAG+GGG | 0.699895 | 8.2:-24576492 | MS.gene60174:CDS |
| AGAGGGGCTTCCATGTACAG+AGG | 0.703240 | 8.2:-24576476 | MS.gene60174:CDS |
| AGCAGATGACATATTCTGTG+AGG | 0.705618 | 8.2:+24577617 | None:intergenic |
| ACTACTACATGCATAATGAG+GGG | 0.710323 | 8.2:+24578028 | None:intergenic |
| CTTAGCAGGTCACAAACACG+AGG | 0.713621 | 8.2:-24578209 | MS.gene60174:intron |
| ACAAGCTAGAAGGAACAAAG+AGG | 0.715606 | 8.2:-24575773 | MS.gene60174:CDS |
| CATGTTATCCAAAGACACTG+AGG | 0.754091 | 8.2:+24575567 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTAATTATATTTTAA+TGG | + | chr8.2:24577401-24577420 | None:intergenic | 0.0% |
| !!! | ATATTTTATTATATCAAAGT+TGG | + | chr8.2:24577972-24577991 | None:intergenic | 10.0% |
| !! | AAATAGTAATTTGAATTCTT+GGG | - | chr8.2:24578441-24578460 | MS.gene60174:CDS | 15.0% |
| !! | AGTACATTACAATATTAAAT+TGG | + | chr8.2:24577609-24577628 | None:intergenic | 15.0% |
| !! | CAATTAATAAACCTTATAAA+TGG | + | chr8.2:24577109-24577128 | None:intergenic | 15.0% |
| !!! | ATTCCAAAATTTTGATTTTA+GGG | - | chr8.2:24576948-24576967 | MS.gene60174:intron | 15.0% |
| !!! | TATGTTTTGAATTGTTTATT+AGG | - | chr8.2:24576437-24576456 | MS.gene60174:intron | 15.0% |
| !!! | TTTTGACAAAAACTATATTT+TGG | + | chr8.2:24576599-24576618 | None:intergenic | 15.0% |
| !! | AAATTATCAAAATCAACTTG+AGG | - | chr8.2:24577171-24577190 | MS.gene60174:intron | 20.0% |
| !! | AACAAAATACAAAATGAGAA+TGG | + | chr8.2:24576751-24576770 | None:intergenic | 20.0% |
| !! | ACATTAACAATGAAAATAAC+TGG | - | chr8.2:24575328-24575347 | MS.gene60174:CDS | 20.0% |
| !! | ATATGATGTTGAAAAAATCA+TGG | - | chr8.2:24577988-24578007 | MS.gene60174:CDS | 20.0% |
| !! | ATTATGTGTGTATTAATGTA+TGG | - | chr8.2:24575645-24575664 | MS.gene60174:CDS | 20.0% |
| !! | CAAATAGTAATTTGAATTCT+TGG | - | chr8.2:24578440-24578459 | MS.gene60174:CDS | 20.0% |
| !! | CAAGAATTCAAATTACTATT+TGG | + | chr8.2:24578442-24578461 | None:intergenic | 20.0% |
| !! | CACAAAAATAGATAAAAAGT+GGG | + | chr8.2:24575698-24575717 | None:intergenic | 20.0% |
| !! | TCACAAAAATAGATAAAAAG+TGG | + | chr8.2:24575699-24575718 | None:intergenic | 20.0% |
| !! | TTGTTTCAATTCCATTTATA+AGG | - | chr8.2:24577095-24577114 | MS.gene60174:intron | 20.0% |
| !!! | AATGATTGTTATTACTAACA+GGG | + | chr8.2:24577057-24577076 | None:intergenic | 20.0% |
| !!! | CATTCCAAAATTTTGATTTT+AGG | - | chr8.2:24576947-24576966 | MS.gene60174:intron | 20.0% |
| !!! | CTTGGATTATATTTTTACTT+GGG | + | chr8.2:24577827-24577846 | None:intergenic | 20.0% |
| !!! | TAATGATTGTTATTACTAAC+AGG | + | chr8.2:24577058-24577077 | None:intergenic | 20.0% |
| !!! | TTCCAAAATTTTGATTTTAG+GGG | - | chr8.2:24576949-24576968 | MS.gene60174:intron | 20.0% |
| !!! | TTTTTAGGTAATGAAACTAT+GGG | - | chr8.2:24575756-24575775 | MS.gene60174:CDS | 20.0% |
| !!! | TTTTTTAGGTAATGAAACTA+TGG | - | chr8.2:24575755-24575774 | MS.gene60174:CDS | 20.0% |
| ! | AAATTTCCATCAATCAAACA+TGG | - | chr8.2:24575962-24575981 | MS.gene60174:intron | 25.0% |
| ! | AACAATGAAAATAACTGGTT+AGG | - | chr8.2:24575333-24575352 | MS.gene60174:CDS | 25.0% |
| ! | AATATGTTGCTCATTTAAGA+AGG | - | chr8.2:24577218-24577237 | MS.gene60174:intron | 25.0% |
| ! | AATGATACTATGTGAACATT+TGG | - | chr8.2:24576547-24576566 | MS.gene60174:intron | 25.0% |
| ! | AATTTCAATGCAGAAGAATA+TGG | - | chr8.2:24578138-24578157 | MS.gene60174:intron | 25.0% |
| ! | AATTTCCATCAATCAAACAT+GGG | - | chr8.2:24575963-24575982 | MS.gene60174:intron | 25.0% |
| ! | ACACCAATATTATTCATTTG+AGG | + | chr8.2:24575372-24575391 | None:intergenic | 25.0% |
| ! | AGTAACTATTGTTACTCTTA+TGG | - | chr8.2:24575492-24575511 | MS.gene60174:CDS | 25.0% |
| ! | CCAAGTAAAAATATAATCCA+AGG | - | chr8.2:24577825-24577844 | MS.gene60174:CDS | 25.0% |
| ! | GGTAATAAAGATCTATATCT+TGG | - | chr8.2:24577526-24577545 | MS.gene60174:CDS | 25.0% |
| ! | TATAATATGACAACTGTTGT+TGG | + | chr8.2:24575878-24575897 | None:intergenic | 25.0% |
| ! | TCTCCTCAAATGAATAATAT+TGG | - | chr8.2:24575366-24575385 | MS.gene60174:CDS | 25.0% |
| ! | TTAAATTGGTACATGATCAA+TGG | + | chr8.2:24577595-24577614 | None:intergenic | 25.0% |
| ! | TTGAATTGTTTATTAGGCAT+AGG | - | chr8.2:24576443-24576462 | MS.gene60174:intron | 25.0% |
| ! | TTTCATTCTCTTATAACAGT+TGG | - | chr8.2:24577147-24577166 | MS.gene60174:intron | 25.0% |
| !! | AGGAAATCTATTGATACTTT+TGG | - | chr8.2:24576290-24576309 | MS.gene60174:CDS | 25.0% |
| !! | CTCATTGAAATGAAACTTTT+AGG | - | chr8.2:24577878-24577897 | MS.gene60174:CDS | 25.0% |
| !!! | CCAAAACTAGAGAATTTTTT+AGG | - | chr8.2:24575741-24575760 | MS.gene60174:CDS | 25.0% |
| !!! | CCTAAAAAATTCTCTAGTTT+TGG | + | chr8.2:24575744-24575763 | None:intergenic | 25.0% |
| !!! | CCTTGGATTATATTTTTACT+TGG | + | chr8.2:24577828-24577847 | None:intergenic | 25.0% |
| !!! | TCCAAAATTTTGATTTTAGG+GGG | - | chr8.2:24576950-24576969 | MS.gene60174:intron | 25.0% |
| !!! | TGTTTTGTTGGATATGATTT+TGG | + | chr8.2:24575848-24575867 | None:intergenic | 25.0% |
| !!! | TTGCTTATGTTTTTAACATG+AGG | - | chr8.2:24576903-24576922 | MS.gene60174:intron | 25.0% |
| !!! | TTTGTTATTAGATTCTGTCT+TGG | - | chr8.2:24576873-24576892 | MS.gene60174:intron | 25.0% |
| !!! | TTTTAGGTAATGAAACTATG+GGG | - | chr8.2:24575757-24575776 | MS.gene60174:CDS | 25.0% |
| AATGAAGAATATGACAAGAC+AGG | - | chr8.2:24577195-24577214 | MS.gene60174:intron | 30.0% | |
| AATTGTTTATTAGGCATAGG+TGG | - | chr8.2:24576446-24576465 | MS.gene60174:intron | 30.0% | |
| ACTTAGTGGTTTAAAGAACT+GGG | - | chr8.2:24575998-24576017 | MS.gene60174:intron | 30.0% | |
| ATAAGCCATTGAACCAATAT+TGG | + | chr8.2:24576111-24576130 | None:intergenic | 30.0% | |
| ATTGCAGCTATAAAATTCAG+AGG | - | chr8.2:24577932-24577951 | MS.gene60174:CDS | 30.0% | |
| CAAAGAACATCTCAATATAG+AGG | - | chr8.2:24576314-24576333 | MS.gene60174:CDS | 30.0% | |
| CTTTCAAAATCTTGTTCACT+TGG | - | chr8.2:24577451-24577470 | MS.gene60174:intron | 30.0% | |
| GAGTAACAATAGTTACTAAG+AGG | + | chr8.2:24575489-24575508 | None:intergenic | 30.0% | |
| GTTCTTTCATTCTCAAATCT+TGG | + | chr8.2:24578208-24578227 | None:intergenic | 30.0% | |
| TACTACTACATGCATAATGA+GGG | + | chr8.2:24575785-24575804 | None:intergenic | 30.0% | |
| TGGAATTGAAACAAAAGACA+TGG | + | chr8.2:24577089-24577108 | None:intergenic | 30.0% | |
| TGTATCAAATGCTTCTTCAT+TGG | - | chr8.2:24578309-24578328 | MS.gene60174:CDS | 30.0% | |
| TGTTGAAAATTCTGTTGCTA+TGG | - | chr8.2:24576217-24576236 | MS.gene60174:intron | 30.0% | |
| TTCAACAGCTTCAAAACTAT+TGG | - | chr8.2:24578405-24578424 | MS.gene60174:CDS | 30.0% | |
| ! | ACCCCCTAAAATCAAAATTT+TGG | + | chr8.2:24576954-24576973 | None:intergenic | 30.0% |
| ! | GTTTAAAGAACTGGGTTTTA+AGG | - | chr8.2:24576006-24576025 | MS.gene60174:intron | 30.0% |
| ! | TGATGGATCTCTTTATGAAA+TGG | - | chr8.2:24575572-24575591 | MS.gene60174:CDS | 30.0% |
| ! | TTTAACTTTCATGCTAACCT+TGG | + | chr8.2:24577845-24577864 | None:intergenic | 30.0% |
| ! | TTTTATAGCTGCAATGTCAT+AGG | + | chr8.2:24577927-24577946 | None:intergenic | 30.0% |
| !! | AATATTGGTTCAATGGCTTA+TGG | - | chr8.2:24576110-24576129 | MS.gene60174:intron | 30.0% |
| !! | AATTTTGATCCCACAAACAT+TGG | + | chr8.2:24577803-24577822 | None:intergenic | 30.0% |
| !!! | AATAGTTTTGAAGCTGTTGA+AGG | + | chr8.2:24578406-24578425 | None:intergenic | 30.0% |
| !!! | TGTTTTTTGCTTTCTTTGCT+TGG | - | chr8.2:24576767-24576786 | MS.gene60174:intron | 30.0% |
| AAGCAAAGTCAAACTTCAAG+TGG | - | chr8.2:24575939-24575958 | MS.gene60174:intron | 35.0% | |
| ACTACTACATGCATAATGAG+GGG | + | chr8.2:24575784-24575803 | None:intergenic | 35.0% | |
| AGCAGAAGCAAATTGTTCAT+AGG | - | chr8.2:24576270-24576289 | MS.gene60174:intron | 35.0% | |
| ATGTTCTGTTCCAATGTTTG+TGG | - | chr8.2:24577790-24577809 | MS.gene60174:CDS | 35.0% | |
| ATTATGCCTCTCAAATCTGA+TGG | - | chr8.2:24575555-24575574 | MS.gene60174:CDS | 35.0% | |
| CTGTTGAAGTTGTTGATGTT+GGG | + | chr8.2:24578179-24578198 | None:intergenic | 35.0% | |
| GACTTAGTGGTTTAAAGAAC+TGG | - | chr8.2:24575997-24576016 | MS.gene60174:intron | 35.0% | |
| GAGATATGAAGCTCATCTAT+GGG | - | chr8.2:24576474-24576493 | MS.gene60174:CDS | 35.0% | |
| GATCTTATCAGAAAAAGCAG+TGG | - | chr8.2:24577303-24577322 | MS.gene60174:CDS | 35.0% | |
| GCTATGGATACAAAGAAAAG+AGG | - | chr8.2:24576233-24576252 | MS.gene60174:intron | 35.0% | |
| GTACTACTACATGCATAATG+AGG | + | chr8.2:24575786-24575805 | None:intergenic | 35.0% | |
| GTGAGTTCTTTCATACTCTT+TGG | - | chr8.2:24577557-24577576 | MS.gene60174:CDS | 35.0% | |
| GTTTCATCAAGAAGTAGTTG+AGG | - | chr8.2:24578264-24578283 | MS.gene60174:CDS | 35.0% | |
| TCAACATTGAACAAGCTAGA+AGG | - | chr8.2:24578026-24578045 | MS.gene60174:CDS | 35.0% | |
| TCTGTTGAAGTTGTTGATGT+TGG | + | chr8.2:24578180-24578199 | None:intergenic | 35.0% | |
| TGATGAGACACAGTTTATCT+TGG | - | chr8.2:24576818-24576837 | MS.gene60174:CDS | 35.0% | |
| TGTAATGTACTAGACACATG+TGG | - | chr8.2:24577618-24577637 | MS.gene60174:CDS | 35.0% | |
| TGTTCTGTTCCAATGTTTGT+GGG | - | chr8.2:24577791-24577810 | MS.gene60174:CDS | 35.0% | |
| TTGTTGTCATATGCAGAAGA+AGG | + | chr8.2:24578103-24578122 | None:intergenic | 35.0% | |
| ! | ATCAGATTTGAGAGGCATAA+TGG | + | chr8.2:24575556-24575575 | None:intergenic | 35.0% |
| ! | CTCAATATAGAGGTGTAACA+AGG | - | chr8.2:24576324-24576343 | MS.gene60174:CDS | 35.0% |
| ! | GTTGGTTGTTCATGTTTTGT+TGG | + | chr8.2:24575860-24575879 | None:intergenic | 35.0% |
| ! | TCAGATTTGAGAGGCATAAT+GGG | + | chr8.2:24575555-24575574 | None:intergenic | 35.0% |
| ! | TTTTTGCTTTCTTTGCTTGG+CGG | - | chr8.2:24576770-24576789 | MS.gene60174:intron | 35.0% |
| !! | AACCATGAGTTGATGTTAGA+AGG | - | chr8.2:24575912-24575931 | MS.gene60174:CDS | 35.0% |
| !! | AACTTTTTCCTCAGTGTCTT+TGG | - | chr8.2:24578234-24578253 | MS.gene60174:CDS | 35.0% |
| !! | ACCATGAGTTGATGTTAGAA+GGG | - | chr8.2:24575913-24575932 | MS.gene60174:intron | 35.0% |
| !! | GAAACTTTTAGGTACTCAAG+AGG | - | chr8.2:24577889-24577908 | MS.gene60174:CDS | 35.0% |
| !! | GATTTTAGGGGGTTATGATA+TGG | - | chr8.2:24576961-24576980 | MS.gene60174:intron | 35.0% |
| !! | TAGCTTGTTCAATGTTGAGA+AGG | + | chr8.2:24578024-24578043 | None:intergenic | 35.0% |
| !! | TGGATCCAATATTGGTTCAA+TGG | - | chr8.2:24576103-24576122 | MS.gene60174:intron | 35.0% |
| !! | TTTTGCAAGCTTGTTCTATC+TGG | + | chr8.2:24578367-24578386 | None:intergenic | 35.0% |
| AAAGAAGGCCAAAGCAGAAA+AGG | - | chr8.2:24576511-24576530 | MS.gene60174:intron | 40.0% | |
| AACAGGGAAGTTTATGTGAG+TGG | + | chr8.2:24577041-24577060 | None:intergenic | 40.0% | |
| AACATGCTGTCTAAGCTCAA+AGG | + | chr8.2:24575825-24575844 | None:intergenic | 40.0% | |
| AAGGCCTAAGATGTTGTGAA+GGG | + | chr8.2:24578468-24578487 | None:intergenic | 40.0% | |
| ACAAGCTAGAAGGAACAAAG+AGG | - | chr8.2:24578036-24578055 | MS.gene60174:CDS | 40.0% | |
| ACAAGCTTGCAAAATCTCTC+TGG | - | chr8.2:24578373-24578392 | MS.gene60174:CDS | 40.0% | |
| ACCCTTCTAACATCAACTCA+TGG | + | chr8.2:24575917-24575936 | None:intergenic | 40.0% | |
| AGAGATCCATCAGATTTGAG+AGG | + | chr8.2:24575564-24575583 | None:intergenic | 40.0% | |
| AGCAGATGACATATTCTGTG+AGG | + | chr8.2:24576195-24576214 | None:intergenic | 40.0% | |
| AGTTACTAAGAGGAGAAGAG+TGG | + | chr8.2:24575479-24575498 | None:intergenic | 40.0% | |
| AGTTTGAGCAGTTCAAGAGA+AGG | - | chr8.2:24578337-24578356 | MS.gene60174:CDS | 40.0% | |
| ATCAAGCAGCACTCAAGTAT+TGG | - | chr8.2:24577008-24577027 | MS.gene60174:intron | 40.0% | |
| ATGAAATGGAAGCTCTTAGC+AGG | - | chr8.2:24575586-24575605 | MS.gene60174:CDS | 40.0% | |
| CAAAGCAGAAAAGGAAGACA+AGG | - | chr8.2:24576520-24576539 | MS.gene60174:intron | 40.0% | |
| CATGTTATCCAAAGACACTG+AGG | + | chr8.2:24578245-24578264 | None:intergenic | 40.0% | |
| CATTAGACATGACACTGACA+CGG | + | chr8.2:24577681-24577700 | None:intergenic | 40.0% | |
| CCTGTTGTAGAGGAAAATGA+AGG | - | chr8.2:24576074-24576093 | MS.gene60174:intron | 40.0% | |
| CTTCACCCATGTTTGATTGA+TGG | + | chr8.2:24575971-24575990 | None:intergenic | 40.0% | |
| GACAACAGTTGCAAGAAAGA+AGG | - | chr8.2:24576496-24576515 | MS.gene60174:CDS | 40.0% | |
| GAGGAAAATGAAGGTGAATG+TGG | - | chr8.2:24576083-24576102 | MS.gene60174:intron | 40.0% | |
| GATGATTGTTCCTGTTGTAG+AGG | - | chr8.2:24576064-24576083 | MS.gene60174:intron | 40.0% | |
| GGACTTGAACATGAAAATGC+TGG | - | chr8.2:24575513-24575532 | MS.gene60174:CDS | 40.0% | |
| GGAGATATGAAGCTCATCTA+TGG | - | chr8.2:24576473-24576492 | MS.gene60174:CDS | 40.0% | |
| GGTGAATGTGGATCCAATAT+TGG | - | chr8.2:24576095-24576114 | MS.gene60174:intron | 40.0% | |
| TCAAACATGGGTGAAGATCA+TGG | - | chr8.2:24575975-24575994 | MS.gene60174:intron | 40.0% | |
| TCAAGCAGCACTCAAGTATT+GGG | - | chr8.2:24577009-24577028 | MS.gene60174:intron | 40.0% | |
| TTGAAGTTGTTGATGTTGGG+AGG | + | chr8.2:24578176-24578195 | None:intergenic | 40.0% | |
| TTTATTAGGCATAGGTGGAC+TGG | - | chr8.2:24576451-24576470 | MS.gene60174:intron | 40.0% | |
| ! | AAAAGCAGTGGATTCTCAAG+AGG | - | chr8.2:24577315-24577334 | MS.gene60174:CDS | 40.0% |
| ! | AAAGCAGTGGATTCTCAAGA+GGG | - | chr8.2:24577316-24577335 | MS.gene60174:CDS | 40.0% |
| ! | AGGAATTTTCCAGCTAGTCA+TGG | - | chr8.2:24576026-24576045 | MS.gene60174:intron | 40.0% |
| ! | CCTTCATTTTCCTCTACAAC+AGG | + | chr8.2:24576077-24576096 | None:intergenic | 40.0% |
| ! | CTTGTCTTCCTTTTCTGCTT+TGG | + | chr8.2:24576522-24576541 | None:intergenic | 40.0% |
| ! | GAGGAGTAACAAGGTCTTAT+AGG | - | chr8.2:24577352-24577371 | MS.gene60174:CDS | 40.0% |
| ! | GGATTCACACGATGATTTTG+CGG | - | chr8.2:24576568-24576587 | MS.gene60174:intron | 40.0% |
| ! | TGGTAAAAGCTTGCTTGAAG+TGG | + | chr8.2:24575459-24575478 | None:intergenic | 40.0% |
| ! | TTATTAGGCATAGGTGGACT+GGG | - | chr8.2:24576452-24576471 | MS.gene60174:intron | 40.0% |
| ! | TTTTGCTTTCTTTGCTTGGC+GGG | - | chr8.2:24576771-24576790 | MS.gene60174:intron | 40.0% |
| AGCTAGAAGGAACAAAGAGG+TGG | - | chr8.2:24578039-24578058 | MS.gene60174:CDS | 45.0% | |
| CCATGTACAGAGGAGTAACA+AGG | - | chr8.2:24577343-24577362 | MS.gene60174:CDS | 45.0% | |
| CCTTGTTACTCCTCTGTACA+TGG | + | chr8.2:24577346-24577365 | None:intergenic | 45.0% | |
| CTTGCCATCTTCCATGTTGA+TGG | + | chr8.2:24577486-24577505 | None:intergenic | 45.0% | |
| GAAGGCCTAAGATGTTGTGA+AGG | + | chr8.2:24578469-24578488 | None:intergenic | 45.0% | |
| GACACCATCAACATGGAAGA+TGG | - | chr8.2:24577479-24577498 | MS.gene60174:intron | 45.0% | |
| GGGAAGTTTATGTGAGTGGA+TGG | + | chr8.2:24577037-24577056 | None:intergenic | 45.0% | |
| GGTGAAGATCATGGACTTAG+TGG | - | chr8.2:24575984-24576003 | MS.gene60174:intron | 45.0% | |
| TATACGCGCACAACTACTAG+CGG | + | chr8.2:24577746-24577765 | None:intergenic | 45.0% | |
| TCTGTCCATGCTGCAAAAAC+TGG | + | chr8.2:24578511-24578530 | None:intergenic | 45.0% | |
| TGATCATGTCCATGACTAGC+TGG | + | chr8.2:24576038-24576057 | None:intergenic | 45.0% | |
| TTTGCTTTCTTTGCTTGGCG+GGG | - | chr8.2:24576772-24576791 | MS.gene60174:intron | 45.0% | |
| ! | AAGCAGTGGATTCTCAAGAG+GGG | - | chr8.2:24577317-24577336 | MS.gene60174:CDS | 45.0% |
| ! | AGATGCCAGTTTTTGCAGCA+TGG | - | chr8.2:24578503-24578522 | MS.gene60174:CDS | 45.0% |
| ! | ATCTGAGGCAAAGAAAGGGA+AGG | + | chr8.2:24578487-24578506 | None:intergenic | 45.0% |
| ! | CAAGCAGCACTCAAGTATTG+GGG | - | chr8.2:24577010-24577029 | MS.gene60174:intron | 45.0% |
| ! | TCACACGATGATTTTGCGGA+CGG | - | chr8.2:24576572-24576591 | MS.gene60174:intron | 45.0% |
| ! | TGGCATCTGAGGCAAAGAAA+GGG | + | chr8.2:24578491-24578510 | None:intergenic | 45.0% |
| ACACAGCTAGACTGAGAGCT+AGG | + | chr8.2:24576167-24576186 | None:intergenic | 50.0% | |
| CTTAGCAGGTCACAAACACG+AGG | - | chr8.2:24575600-24575619 | MS.gene60174:CDS | 50.0% | |
| GCAGAAGCAGAAGCAGAAGA+AGG | + | chr8.2:24575423-24575442 | None:intergenic | 50.0% | |
| GCTCGAATTGGTAGAGTAGC+TGG | - | chr8.2:24577505-24577524 | MS.gene60174:CDS | 50.0% | |
| GCTGCAAAAACTGGCATCTG+AGG | + | chr8.2:24578502-24578521 | None:intergenic | 50.0% | |
| GGAAGATGGCAAGCTCGAAT+TGG | - | chr8.2:24577493-24577512 | MS.gene60174:CDS | 50.0% | |
| GGGACCCTTCACAACATCTT+AGG | - | chr8.2:24578461-24578480 | MS.gene60174:CDS | 50.0% | |
| GGTAGCAGACACCATCAACA+TGG | - | chr8.2:24577472-24577491 | MS.gene60174:intron | 50.0% | |
| ! | CTGGCATCTGAGGCAAAGAA+AGG | + | chr8.2:24578492-24578511 | None:intergenic | 50.0% |
| AGAGGGGCTTCCATGTACAG+AGG | - | chr8.2:24577333-24577352 | MS.gene60174:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 24575294 | 24578537 | 24575294 | ID=MS.gene60174 |
| chr8.2 | mRNA | 24575294 | 24578537 | 24575294 | ID=MS.gene60174.t1;Parent=MS.gene60174 |
| chr8.2 | exon | 24578210 | 24578537 | 24578210 | ID=MS.gene60174.t1.exon1;Parent=MS.gene60174.t1 |
| chr8.2 | CDS | 24578210 | 24578537 | 24578210 | ID=cds.MS.gene60174.t1;Parent=MS.gene60174.t1 |
| chr8.2 | exon | 24577486 | 24578110 | 24577486 | ID=MS.gene60174.t1.exon2;Parent=MS.gene60174.t1 |
| chr8.2 | CDS | 24577486 | 24578110 | 24577486 | ID=cds.MS.gene60174.t1;Parent=MS.gene60174.t1 |
| chr8.2 | exon | 24577290 | 24577372 | 24577290 | ID=MS.gene60174.t1.exon3;Parent=MS.gene60174.t1 |
| chr8.2 | CDS | 24577290 | 24577372 | 24577290 | ID=cds.MS.gene60174.t1;Parent=MS.gene60174.t1 |
| chr8.2 | exon | 24576992 | 24577000 | 24576992 | ID=MS.gene60174.t1.exon4;Parent=MS.gene60174.t1 |
| chr8.2 | CDS | 24576992 | 24577000 | 24576992 | ID=cds.MS.gene60174.t1;Parent=MS.gene60174.t1 |
| chr8.2 | exon | 24576774 | 24576862 | 24576774 | ID=MS.gene60174.t1.exon5;Parent=MS.gene60174.t1 |
| chr8.2 | CDS | 24576774 | 24576862 | 24576774 | ID=cds.MS.gene60174.t1;Parent=MS.gene60174.t1 |
| chr8.2 | exon | 24576592 | 24576665 | 24576592 | ID=MS.gene60174.t1.exon6;Parent=MS.gene60174.t1 |
| chr8.2 | CDS | 24576592 | 24576665 | 24576592 | ID=cds.MS.gene60174.t1;Parent=MS.gene60174.t1 |
| chr8.2 | exon | 24576467 | 24576517 | 24576467 | ID=MS.gene60174.t1.exon7;Parent=MS.gene60174.t1 |
| chr8.2 | CDS | 24576467 | 24576517 | 24576467 | ID=cds.MS.gene60174.t1;Parent=MS.gene60174.t1 |
| chr8.2 | exon | 24576275 | 24576351 | 24576275 | ID=MS.gene60174.t1.exon8;Parent=MS.gene60174.t1 |
| chr8.2 | CDS | 24576275 | 24576351 | 24576275 | ID=cds.MS.gene60174.t1;Parent=MS.gene60174.t1 |
| chr8.2 | exon | 24575294 | 24575931 | 24575294 | ID=MS.gene60174.t1.exon9;Parent=MS.gene60174.t1 |
| chr8.2 | CDS | 24575294 | 24575931 | 24575294 | ID=cds.MS.gene60174.t1;Parent=MS.gene60174.t1 |
| Gene Sequence |
| Protein sequence |
