AlfalfaGEDB | MS.gene64923

M. sativa cultivar XinJiangDaYe / MS.gene64923

KEGG: K15397
GO: GO:0003674 GO:0003824 GO:0005575 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0016020 GO:0016053 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0046394 GO:0071704 GO:0072330 GO:0110165 GO:1901576
PFAM: PF08392.15 PF08541.13

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64923.t1	XP_003606588.1	96	428	17	0	1	428	46	473	1.90E-238	834.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64923.t1	Q9SIB2	70.6	429	121	2	1	425	46	473	2.2e-179	629.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64923.t1	G7JSP0	96.0	428	17	0	1	428	46	473	1.4e-238	834.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049491	MS.gene64923	0.807096	5.97E-50	-1.69E-46
MS.gene049662	MS.gene64923	0.806948	6.42E-50	-1.69E-46
MS.gene049758	MS.gene64923	0.842253	2.90E-58	-1.69E-46
MS.gene050099	MS.gene64923	0.81426	1.69E-51	-1.69E-46
MS.gene050128	MS.gene64923	0.813935	1.99E-51	-1.69E-46
MS.gene050301	MS.gene64923	0.839973	1.15E-57	-1.69E-46
MS.gene050397	MS.gene64923	0.808831	2.55E-50	-1.69E-46
MS.gene050642	MS.gene64923	0.802492	5.47E-49	-1.69E-46
MS.gene05101	MS.gene64923	0.818076	2.37E-52	-1.69E-46
MS.gene051471	MS.gene64923	0.81587	7.41E-52	-1.69E-46
MS.gene051662	MS.gene64923	0.823314	1.48E-53	-1.69E-46
MS.gene051663	MS.gene64923	0.834161	3.52E-56	-1.69E-46
MS.gene051860	MS.gene64923	0.824704	6.99E-54	-1.69E-46
MS.gene052078	MS.gene64923	0.829597	4.71E-55	-1.69E-46
MS.gene052178	MS.gene64923	0.839603	1.44E-57	-1.69E-46
MS.gene052188	MS.gene64923	0.811389	7.18E-51	-1.69E-46
MS.gene052253	MS.gene64923	0.810918	9.08E-51	-1.69E-46
MS.gene052310	MS.gene64923	0.801551	8.54E-49	-1.69E-46
MS.gene052340	MS.gene64923	0.81748	3.23E-52	-1.69E-46
MS.gene053557	MS.gene64923	0.804964	1.68E-49	-1.69E-46
MS.gene053836	MS.gene64923	0.868683	5.44E-66	-1.69E-46
MS.gene054010	MS.gene64923	0.803208	3.89E-49	-1.69E-46
MS.gene054011	MS.gene64923	0.824301	8.69E-54	-1.69E-46
MS.gene054012	MS.gene64923	0.819401	1.18E-52	-1.69E-46
MS.gene054013	MS.gene64923	0.811427	7.04E-51	-1.69E-46
MS.gene054184	MS.gene64923	0.829905	3.96E-55	-1.69E-46
MS.gene054185	MS.gene64923	0.837511	4.98E-57	-1.69E-46
MS.gene055277	MS.gene64923	0.846727	1.81E-59	-1.69E-46
MS.gene055422	MS.gene64923	0.872517	2.99E-67	-1.69E-46
MS.gene055428	MS.gene64923	0.845104	5.00E-59	-1.69E-46
MS.gene055604	MS.gene64923	0.802077	6.66E-49	-1.69E-46
MS.gene056191	MS.gene64923	0.824478	7.90E-54	-1.69E-46
MS.gene056612	MS.gene64923	0.812573	3.96E-51	-1.69E-46
MS.gene05702	MS.gene64923	0.808436	3.10E-50	-1.69E-46
MS.gene057121	MS.gene64923	0.81192	5.50E-51	-1.69E-46
MS.gene057245	MS.gene64923	0.819218	1.30E-52	-1.69E-46
MS.gene05733	MS.gene64923	0.810831	9.48E-51	-1.69E-46
MS.gene057439	MS.gene64923	0.821089	4.86E-53	-1.69E-46
MS.gene057782	MS.gene64923	0.829092	6.24E-55	-1.69E-46
MS.gene057794	MS.gene64923	0.807403	5.14E-50	-1.69E-46
MS.gene058002	MS.gene64923	0.826023	3.41E-54	-1.69E-46
MS.gene05811	MS.gene64923	0.857403	1.67E-62	-1.69E-46
MS.gene058660	MS.gene64923	0.825116	5.59E-54	-1.69E-46
MS.gene058845	MS.gene64923	0.810012	1.42E-50	-1.69E-46
MS.gene058928	MS.gene64923	0.8	1.77E-48	-1.69E-46
MS.gene05907	MS.gene64923	0.845026	5.25E-59	-1.69E-46
MS.gene059294	MS.gene64923	0.834991	2.18E-56	-1.69E-46
MS.gene059518	MS.gene64923	0.854001	1.65E-61	-1.69E-46
MS.gene059597	MS.gene64923	0.817811	2.72E-52	-1.69E-46
MS.gene05984	MS.gene64923	0.858438	8.24E-63	-1.69E-46
MS.gene059894	MS.gene64923	0.832446	9.41E-56	-1.69E-46
MS.gene059974	MS.gene64923	0.801239	9.89E-49	-1.69E-46
MS.gene060005	MS.gene64923	0.802185	6.32E-49	-1.69E-46
MS.gene06037	MS.gene64923	0.827902	1.21E-54	-1.69E-46
MS.gene060404	MS.gene64923	0.807179	5.74E-50	-1.69E-46
MS.gene060476	MS.gene64923	0.827701	1.35E-54	-1.69E-46
MS.gene061049	MS.gene64923	0.849119	3.97E-60	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64923.t1	MTR_4g062190	96.028	428	17	0	1	428	46	473	0.0	817
MS.gene64923.t1	MTR_4g062270	85.047	428	55	1	1	428	46	464	0.0	759
MS.gene64923.t1	MTR_4g062170	86.682	428	56	1	1	428	46	472	0.0	758
MS.gene64923.t1	MTR_2g096210	71.362	426	116	3	2	423	47	470	0.0	639
MS.gene64923.t1	MTR_1g115560	55.582	421	179	1	2	414	48	468	5.50e-180	511
MS.gene64923.t1	MTR_7g118170	43.909	394	203	5	9	397	145	525	1.44e-112	341
MS.gene64923.t1	MTR_1g076430	43.421	380	192	4	24	397	141	503	9.00e-106	323
MS.gene64923.t1	MTR_5g056510	41.645	377	204	3	23	397	125	487	1.34e-105	322
MS.gene64923.t1	MTR_3g105550	39.541	392	230	2	9	397	146	533	1.58e-105	323
MS.gene64923.t1	MTR_4g070270	41.161	379	207	4	23	399	137	501	5.20e-105	320
MS.gene64923.t1	MTR_1g110930	40.318	377	209	3	23	397	125	487	1.06e-103	317
MS.gene64923.t1	MTR_2g054940	42.105	380	197	4	24	397	140	502	2.17e-103	317
MS.gene64923.t1	MTR_7g118160	45.846	325	153	3	78	397	110	416	3.38e-103	313
MS.gene64923.t1	MTR_1g041085	42.368	380	196	4	24	397	147	509	1.02e-102	315
MS.gene64923.t1	MTR_2g007020	42.257	381	199	6	24	399	86	450	4.06e-96	296
MS.gene64923.t1	MTR_7g081695	41.316	380	188	5	24	397	140	490	5.80e-95	301
MS.gene64923.t1	MTR_6g032965	39.461	408	221	6	10	408	2	392	5.94e-95	291
MS.gene64923.t1	MTR_4g054415	38.889	378	213	4	24	397	59	422	6.51e-95	292
MS.gene64923.t1	MTR_4g054630	38.889	378	213	4	24	397	100	463	8.97e-95	293
MS.gene64923.t1	MTR_6g074880	39.737	380	207	7	24	397	102	465	3.42e-94	291
MS.gene64923.t1	MTR_4g113280	38.131	396	195	5	23	415	128	476	4.78e-93	289
MS.gene64923.t1	MTR_2g436480	38.684	380	219	4	24	401	85	452	6.59e-90	280
MS.gene64923.t1	MTR_2g013740	37.333	375	218	2	9	383	135	492	1.37e-85	270
MS.gene64923.t1	MTR_1g102290	38.360	378	215	7	24	397	120	483	6.39e-84	265
MS.gene64923.t1	MTR_3g072940	36.870	377	220	6	24	397	121	482	8.62e-78	249
MS.gene64923.t1	MTR_3g072980	36.870	377	220	6	24	397	121	482	9.09e-78	249
MS.gene64923.t1	MTR_6g051440	36.870	377	220	6	24	397	120	481	3.66e-73	238
MS.gene64923.t1	MTR_4g054260	37.262	263	125	5	142	397	93	322	1.38e-50	174
MS.gene64923.t1	MTR_4g053905	39.877	163	82	2	238	397	7	156	2.17e-36	131

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64923.t1	AT2G28630	70.629	429	121	2	1	425	46	473	0.0	629
MS.gene64923.t1	AT2G28630	70.629	429	121	2	1	425	46	473	0.0	629
MS.gene64923.t1	AT1G07720	69.070	430	128	3	1	425	89	518	0.0	617
MS.gene64923.t1	AT1G07720	69.070	430	128	3	1	425	46	475	0.0	615
MS.gene64923.t1	AT5G04530	55.048	416	175	4	2	414	49	455	1.85e-175	499
MS.gene64923.t1	AT1G01120	44.415	376	179	6	32	397	168	523	6.89e-113	341
MS.gene64923.t1	AT1G25450	42.706	377	200	3	23	397	121	483	6.85e-108	327
MS.gene64923.t1	AT2G46720	41.885	382	199	4	23	397	97	462	3.65e-107	325
MS.gene64923.t1	AT2G16280	42.338	385	206	4	15	397	137	507	6.95e-107	325
MS.gene64923.t1	AT4G34510	42.480	379	199	5	23	397	119	482	2.78e-105	320
MS.gene64923.t1	AT1G19440	40.921	391	209	5	12	397	138	511	2.67e-104	319
MS.gene64923.t1	AT1G68530	41.114	377	206	3	23	397	126	488	3.64e-104	318
MS.gene64923.t1	AT1G04220	39.798	397	214	5	13	397	129	512	4.06e-103	316
MS.gene64923.t1	AT5G43760	40.750	400	205	6	13	397	135	517	5.59e-103	316
MS.gene64923.t1	AT4G34250	43.194	382	193	7	24	399	123	486	7.08e-103	315
MS.gene64923.t1	AT2G15090	40.576	382	203	5	24	399	115	478	4.60e-102	312
MS.gene64923.t1	AT2G26640	41.514	383	201	4	23	399	137	502	6.31e-102	313
MS.gene64923.t1	AT3G10280	40.576	382	197	5	23	397	97	455	2.07e-100	307
MS.gene64923.t1	AT4G34520	41.161	379	202	5	24	397	125	487	1.06e-98	304
MS.gene64923.t1	AT2G26250	37.284	405	237	4	9	397	144	547	3.87e-95	296
MS.gene64923.t1	AT1G71160	40.054	367	203	5	33	397	94	445	4.37e-92	286
MS.gene64923.t1	AT5G49070	39.237	367	207	4	34	397	99	452	7.90e-89	277
MS.gene64923.t1	AT3G52160	34.637	358	187	3	27	383	16	327	1.42e-74	236
MS.gene64923.t1	AT3G52160	33.511	376	203	3	9	383	111	440	2.75e-73	237
MS.gene64923.t1	AT1G68530	39.648	227	136	1	23	249	126	351	1.93e-55	188
MS.gene64923.t1	AT5G49070	33.488	215	142	1	34	248	99	312	4.37e-34	130

Find 75 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATATACGTTTGTTCTTTA+AGG	0.033751	4.4:+43213896	None:intergenic
TTCTCTTATTGGCAAAATTT+TGG	0.091113	4.4:+43213710	None:intergenic
AAGAGAACTTCTTAGGTTTC+TGG	0.130095	4.4:-43213694	MS.gene64923:CDS
AATCAGAAGAACAGAAAATT+TGG	0.148132	4.4:-43214423	MS.gene64923:CDS
CGGCCTTCAATGACATTTCT+TGG	0.159210	4.4:+43214332	None:intergenic
AACCTAAGAAGTTCTCTTAT+TGG	0.180213	4.4:+43213699	None:intergenic
TCAAATGCAATAGTTGCTTA+TGG	0.231406	4.4:-43213344	MS.gene64923:CDS
AAGAAACAAGTTAGCACTTT+TGG	0.238756	4.4:-43214033	MS.gene64923:CDS
GTATAATTGTTGCCTTAAAA+AGG	0.254484	4.4:-43213826	MS.gene64923:CDS
TCATTGCCAGGATACCAATT+TGG	0.281930	4.4:+43213990	None:intergenic
GGCCTTCAATGACATTTCTT+GGG	0.318949	4.4:+43214333	None:intergenic
TACCTTCACTTAAGAAAATC+AGG	0.326135	4.4:+43213183	None:intergenic
TGCCAATAAGAGAACTTCTT+AGG	0.328413	4.4:-43213701	MS.gene64923:CDS
GACAACAAGAACATCGATTT+CGG	0.346319	4.4:+43214211	None:intergenic
CAGAGTCTCTTAGTCCAAAT+TGG	0.351890	4.4:-43214004	MS.gene64923:CDS
GTCGTTGATCAATCCTTTCA+TGG	0.352995	4.4:-43213256	MS.gene64923:CDS
AGATCCCGTCGTTCAGTGTT+GGG	0.365852	4.4:+43214300	None:intergenic
CAAATGCAATAGTTGCTTAT+GGG	0.367150	4.4:-43213343	MS.gene64923:CDS
CGATGTAGTGTCATTCTTGC+TGG	0.370734	4.4:+43213477	None:intergenic
AAAGCAGTGATTGATGGAAT+TGG	0.371201	4.4:-43213534	MS.gene64923:CDS
AATCCTTTCATGGAGAAGTA+TGG	0.384841	4.4:-43213246	MS.gene64923:CDS
GGTAGTTTGTGGTATGTGTT+GGG	0.386936	4.4:-43213435	MS.gene64923:CDS
GTGGTATGTGTTGGGGTACA+TGG	0.407931	4.4:-43213427	MS.gene64923:CDS
ATCAGAAGAACAGAAAATTT+GGG	0.409146	4.4:-43214422	MS.gene64923:CDS
AGAATGACACTACATCGTTT+TGG	0.409603	4.4:-43213471	MS.gene64923:CDS
TGAAATTGAAGTGTTTAGTC+AGG	0.413898	4.4:-43213875	MS.gene64923:CDS
GGAGGAAAAGCAGTGATTGA+TGG	0.414329	4.4:-43213540	MS.gene64923:CDS
GCCATTGTAAGTTGCGGCAT+TGG	0.420437	4.4:-43214371	MS.gene64923:CDS
ACACTTCTGCTGGTAGTTTG+TGG	0.431099	4.4:-43213446	MS.gene64923:CDS
TGTTGGAGATGCAAATGTTT+GGG	0.448918	4.4:-43213307	MS.gene64923:CDS
CTTAGTCCAAATTGGTATCC+TGG	0.469589	4.4:-43213996	MS.gene64923:CDS
GCCCCAAGAAATGTCATTGA+AGG	0.479831	4.4:-43214335	MS.gene64923:CDS
ATGTTGGAGATGCAAATGTT+TGG	0.481221	4.4:-43213308	MS.gene64923:CDS
ACAATTATACGAGTCATCTC+TGG	0.483305	4.4:+43213839	None:intergenic
TGGTAGTTTGTGGTATGTGT+TGG	0.487783	4.4:-43213436	MS.gene64923:CDS
GTGTACAATATCACTGGAAT+GGG	0.488754	4.4:-43214110	MS.gene64923:CDS
AGTGTACAATATCACTGGAA+TGG	0.492125	4.4:-43214111	MS.gene64923:CDS
GAGATCCCGTCGTTCAGTGT+TGG	0.492490	4.4:+43214299	None:intergenic
TTTATGATAAGCTTTGGTGC+TGG	0.494845	4.4:-43213369	MS.gene64923:CDS
AAGCTCTTGTTGCTACCAAT+GGG	0.506575	4.4:+43213760	None:intergenic
AAAGCTCTTGTTGCTACCAA+TGG	0.508160	4.4:+43213759	None:intergenic
AAGAACATCGATTTCGGAAG+GGG	0.511755	4.4:+43214217	None:intergenic
ATCATTGATCTATCATTGCC+AGG	0.516044	4.4:+43213978	None:intergenic
AAAATCAGGAAGTTCAAAGT+TGG	0.518001	4.4:+43213197	None:intergenic
GCCTTCAATGACATTTCTTG+GGG	0.524862	4.4:+43214334	None:intergenic
AGTTCTAAGTCTTCTAGTGG+TGG	0.525949	4.4:-43213630	MS.gene64923:CDS
TCAGTGTTGGGGATGCTTCG+CGG	0.526193	4.4:+43214312	None:intergenic
GTAAAAGTGTACAATATCAC+TGG	0.527763	4.4:-43214116	MS.gene64923:CDS
CAAAAGAATGGCACAACCAC+CGG	0.537261	4.4:+43213932	None:intergenic
CATCCCCAACACTGAACGAC+GGG	0.538304	4.4:-43214304	MS.gene64923:CDS
GGGAAATAGCTGATCTTGCA+AGG	0.546650	4.4:+43214237	None:intergenic
CAACCATACTTCTCCATGAA+AGG	0.546958	4.4:+43213243	None:intergenic
GCCAATGCCGCAACTTACAA+TGG	0.550333	4.4:+43214370	None:intergenic
CCAACACAAGATAGAATGCT+AGG	0.550403	4.4:-43214467	None:intergenic
TCTAAGTCTTCTAGTGGTGG+AGG	0.552416	4.4:-43213627	MS.gene64923:CDS
TCTAGTTCTAAGTCTTCTAG+TGG	0.554027	4.4:-43213633	MS.gene64923:CDS
AAAGGATTGATCAACGACTC+TGG	0.554712	4.4:+43213261	None:intergenic
CTCAAAGCCATTGTAAGTTG+CGG	0.555108	4.4:-43214377	MS.gene64923:CDS
GAAGACGAGCATGGTACGGT+TGG	0.556957	4.4:-43213804	MS.gene64923:CDS
TGGGAAGTGATGAAAGATGT+TGG	0.557628	4.4:-43213324	MS.gene64923:CDS
GATCCCGTCGTTCAGTGTTG+GGG	0.581474	4.4:+43214301	None:intergenic
GAACGACGGGATCTCAGAGA+TGG	0.585890	4.4:-43214291	MS.gene64923:CDS
AATGATAAGCGACGATAGTG+AGG	0.593382	4.4:+43214163	None:intergenic
CTTTCATGGAGAAGTATGGT+TGG	0.599046	4.4:-43213242	MS.gene64923:CDS
ACAAGAACATCGATTTCGGA+AGG	0.601193	4.4:+43214215	None:intergenic
AAAGGAAGACGAGCATGGTA+CGG	0.603680	4.4:-43213808	MS.gene64923:CDS
CAAGAACATCGATTTCGGAA+GGG	0.615853	4.4:+43214216	None:intergenic
GTAGTTTGTGGTATGTGTTG+GGG	0.639729	4.4:-43213434	MS.gene64923:CDS
CGACGATAGTGAGGGAACAG+AGG	0.641207	4.4:+43214172	None:intergenic
CAACACAAGATAGAATGCTA+GGG	0.644647	4.4:-43214466	None:intergenic
TGTTTAGTCAGGACGCATCA+CGG	0.653313	4.4:-43213864	MS.gene64923:CDS
TGGTTGGCTCAATGAAGTTG+AGG	0.662172	4.4:-43213226	MS.gene64923:CDS
GGATTGATCAACGACTCTGG+TGG	0.663465	4.4:+43213264	None:intergenic
ATGATAAGCGACGATAGTGA+GGG	0.664201	4.4:+43214164	None:intergenic
GCATCCCCAACACTGAACGA+CGG	0.688356	4.4:-43214305	MS.gene64923:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATCAGAAGAACAGAAAATT+TGG	-	chr4.4:43213217-43213236	MS.gene64923:CDS	25.0%
!	ATCAGAAGAACAGAAAATTT+GGG	-	chr4.4:43213218-43213237	MS.gene64923:CDS	25.0%
!	CAATATACGTTTGTTCTTTA+AGG	+	chr4.4:43213747-43213766	None:intergenic	25.0%
!	GTATAATTGTTGCCTTAAAA+AGG	-	chr4.4:43213814-43213833	MS.gene64923:CDS	25.0%
!!	AGCTTTTGTTGAGAATTTAA+GGG	-	chr4.4:43213898-43213917	MS.gene64923:CDS	25.0%
!!	TCTCTTATTGGCAAAATTTT+GGG	+	chr4.4:43213932-43213951	None:intergenic	25.0%
!!	TTCTCTTATTGGCAAAATTT+TGG	+	chr4.4:43213933-43213952	None:intergenic	25.0%
!!!	ACACCAGTTTTAAAATTCAA+TGG	+	chr4.4:43214058-43214077	None:intergenic	25.0%
!!!	TCACCATTGAATTTTAAAAC+TGG	-	chr4.4:43214052-43214071	MS.gene64923:CDS	25.0%
!!!	TCTTTTGTTTGTCAAAAGAA+TGG	+	chr4.4:43213723-43213742	None:intergenic	25.0%
	AAAATCAGGAAGTTCAAAGT+TGG	+	chr4.4:43214446-43214465	None:intergenic	30.0%
	AACCTAAGAAGTTCTCTTAT+TGG	+	chr4.4:43213944-43213963	None:intergenic	30.0%
	CAAATGCAATAGTTGCTTAT+GGG	-	chr4.4:43214297-43214316	MS.gene64923:CDS	30.0%
	TCAAATGCAATAGTTGCTTA+TGG	-	chr4.4:43214296-43214315	MS.gene64923:CDS	30.0%
	TTTATCAAAAACTCTCCCAT+TGG	-	chr4.4:43213865-43213884	MS.gene64923:CDS	30.0%
!	AAGAAACAAGTTAGCACTTT+TGG	-	chr4.4:43213607-43213626	MS.gene64923:CDS	30.0%
!	AGGGTTTTTATGATAAGCTT+TGG	-	chr4.4:43214265-43214284	MS.gene64923:CDS	30.0%
!	GAGCTTTTGTTGAGAATTTA+AGG	-	chr4.4:43213897-43213916	MS.gene64923:CDS	30.0%
!	GTAAAAGTGTACAATATCAC+TGG	-	chr4.4:43213524-43213543	MS.gene64923:CDS	30.0%
!	TGAAATTGAAGTGTTTAGTC+AGG	-	chr4.4:43213765-43213784	MS.gene64923:CDS	30.0%
	AAAGCAGTGATTGATGGAAT+TGG	-	chr4.4:43214106-43214125	MS.gene64923:CDS	35.0%
	AAGAGAACTTCTTAGGTTTC+TGG	-	chr4.4:43213946-43213965	MS.gene64923:CDS	35.0%
	AATCCTTTCATGGAGAAGTA+TGG	-	chr4.4:43214394-43214413	MS.gene64923:CDS	35.0%
	ACAATTATACGAGTCATCTC+TGG	+	chr4.4:43213804-43213823	None:intergenic	35.0%
	AGTGTACAATATCACTGGAA+TGG	-	chr4.4:43213529-43213548	MS.gene64923:CDS	35.0%
	ATCATTGATCTATCATTGCC+AGG	+	chr4.4:43213665-43213684	None:intergenic	35.0%
	ATGTTGGAGATGCAAATGTT+TGG	-	chr4.4:43214332-43214351	MS.gene64923:CDS	35.0%
	GCAAAAAAGAGGCTCAAAAA+AGG	-	chr4.4:43214238-43214257	MS.gene64923:CDS	35.0%
	GTGTACAATATCACTGGAAT+GGG	-	chr4.4:43213530-43213549	MS.gene64923:CDS	35.0%
	TGCCAATAAGAGAACTTCTT+AGG	-	chr4.4:43213939-43213958	MS.gene64923:CDS	35.0%
	TGTTGGAGATGCAAATGTTT+GGG	-	chr4.4:43214333-43214352	MS.gene64923:CDS	35.0%
!	AGAATGACACTACATCGTTT+TGG	-	chr4.4:43214169-43214188	MS.gene64923:CDS	35.0%
!	TTTATGATAAGCTTTGGTGC+TGG	-	chr4.4:43214271-43214290	MS.gene64923:CDS	35.0%
!!	GACAACAAGAACATCGATTT+CGG	+	chr4.4:43213432-43213451	None:intergenic	35.0%
!!	TCTAGTTCTAAGTCTTCTAG+TGG	-	chr4.4:43214007-43214026	MS.gene64923:CDS	35.0%
	AAAGCTCTTGTTGCTACCAA+TGG	+	chr4.4:43213884-43213903	None:intergenic	40.0%
	AAAGGATTGATCAACGACTC+TGG	+	chr4.4:43214382-43214401	None:intergenic	40.0%
	AAGCTCTTGTTGCTACCAAT+GGG	+	chr4.4:43213883-43213902	None:intergenic	40.0%
	AATGATAAGCGACGATAGTG+AGG	+	chr4.4:43213480-43213499	None:intergenic	40.0%
	AGAGGCTCAAAAAAGGTGAT+AGG	-	chr4.4:43214245-43214264	MS.gene64923:CDS	40.0%
	ATGATAAGCGACGATAGTGA+GGG	+	chr4.4:43213479-43213498	None:intergenic	40.0%
	CAACCATACTTCTCCATGAA+AGG	+	chr4.4:43214400-43214419	None:intergenic	40.0%
	CAGAGTCTCTTAGTCCAAAT+TGG	-	chr4.4:43213636-43213655	MS.gene64923:CDS	40.0%
	CTCAAAGCCATTGTAAGTTG+CGG	-	chr4.4:43213263-43213282	MS.gene64923:CDS	40.0%
	CTTAAAAAGGAAGACGAGCA+TGG	-	chr4.4:43213827-43213846	MS.gene64923:CDS	40.0%
	CTTAGTCCAAATTGGTATCC+TGG	-	chr4.4:43213644-43213663	MS.gene64923:CDS	40.0%
	GAGGCTCAAAAAAGGTGATA+GGG	-	chr4.4:43214246-43214265	MS.gene64923:CDS	40.0%
	GCCTTCAATGACATTTCTTG+GGG	+	chr4.4:43213309-43213328	None:intergenic	40.0%
	GGCCTTCAATGACATTTCTT+GGG	+	chr4.4:43213310-43213329	None:intergenic	40.0%
	GGTACATGGAAGCAAAAAAG+AGG	-	chr4.4:43214227-43214246	MS.gene64923:CDS	40.0%
	GTCGTTGATCAATCCTTTCA+TGG	-	chr4.4:43214384-43214403	MS.gene64923:CDS	40.0%
	TCATTGCCAGGATACCAATT+TGG	+	chr4.4:43213653-43213672	None:intergenic	40.0%
	TGGGAAGTGATGAAAGATGT+TGG	-	chr4.4:43214316-43214335	MS.gene64923:CDS	40.0%
!	CATGCTCGTCTTCCTTTTTA+AGG	+	chr4.4:43213829-43213848	None:intergenic	40.0%
!	CTTTCATGGAGAAGTATGGT+TGG	-	chr4.4:43214398-43214417	MS.gene64923:CDS	40.0%
!	GGTAGTTTGTGGTATGTGTT+GGG	-	chr4.4:43214205-43214224	MS.gene64923:CDS	40.0%
!	GTAGTTTGTGGTATGTGTTG+GGG	-	chr4.4:43214206-43214225	MS.gene64923:CDS	40.0%
!	TGGTAGTTTGTGGTATGTGT+TGG	-	chr4.4:43214204-43214223	MS.gene64923:CDS	40.0%
!!	AAGAACATCGATTTCGGAAG+GGG	+	chr4.4:43213426-43213445	None:intergenic	40.0%
!!	ACAAGAACATCGATTTCGGA+AGG	+	chr4.4:43213428-43213447	None:intergenic	40.0%
!!	AGTTCTAAGTCTTCTAGTGG+TGG	-	chr4.4:43214010-43214029	MS.gene64923:CDS	40.0%
!!	CAAGAACATCGATTTCGGAA+GGG	+	chr4.4:43213427-43213446	None:intergenic	40.0%
!!	GATCATTTTTGCCTCCATAC+AGG	-	chr4.4:43214079-43214098	MS.gene64923:CDS	40.0%
	AAAGGAAGACGAGCATGGTA+CGG	-	chr4.4:43213832-43213851	MS.gene64923:CDS	45.0%
	ACACTTCTGCTGGTAGTTTG+TGG	-	chr4.4:43214194-43214213	MS.gene64923:CDS	45.0%
	ACCGGTGCGAAAAAGACAAT+TGG	+	chr4.4:43213693-43213712	None:intergenic	45.0%
	CAAAAGAATGGCACAACCAC+CGG	+	chr4.4:43213711-43213730	None:intergenic	45.0%
	CGGCCTTCAATGACATTTCT+TGG	+	chr4.4:43213311-43213330	None:intergenic	45.0%
	GCCCCAAGAAATGTCATTGA+AGG	-	chr4.4:43213305-43213324	MS.gene64923:CDS	45.0%
	GGAGGAAAAGCAGTGATTGA+TGG	-	chr4.4:43214100-43214119	MS.gene64923:CDS	45.0%
	GGGAAATAGCTGATCTTGCA+AGG	+	chr4.4:43213406-43213425	None:intergenic	45.0%
	TCTAAGTCTTCTAGTGGTGG+AGG	-	chr4.4:43214013-43214032	MS.gene64923:CDS	45.0%
	TGTTTAGTCAGGACGCATCA+CGG	-	chr4.4:43213776-43213795	MS.gene64923:CDS	45.0%
!	ATGCTAGGGACTGAGTTTTG+TGG	-	chr4.4:43213188-43213207	MS.gene64923:CDS	45.0%
!	CATTTTTGCCTCCATACAGG+AGG	-	chr4.4:43214082-43214101	MS.gene64923:CDS	45.0%
!	CGATGTAGTGTCATTCTTGC+TGG	+	chr4.4:43214166-43214185	None:intergenic	45.0%
!	TGGTTGGCTCAATGAAGTTG+AGG	-	chr4.4:43214414-43214433	MS.gene64923:CDS	45.0%
!!	AATTGTCTTTTTCGCACCGG+TGG	-	chr4.4:43213692-43213711	MS.gene64923:CDS	45.0%
!!	CGTTTTGGTAACACTTCTGC+TGG	-	chr4.4:43214184-43214203	MS.gene64923:CDS	45.0%
!!	GCCAATTGTCTTTTTCGCAC+CGG	-	chr4.4:43213689-43213708	MS.gene64923:CDS	45.0%
!!	TCACTGCTTTTCCTCCTGTA+TGG	+	chr4.4:43214096-43214115	None:intergenic	45.0%
	AGATCCCGTCGTTCAGTGTT+GGG	+	chr4.4:43213343-43213362	None:intergenic	50.0%
	GCCAATGCCGCAACTTACAA+TGG	+	chr4.4:43213273-43213292	None:intergenic	50.0%
	GCCATTGTAAGTTGCGGCAT+TGG	-	chr4.4:43213269-43213288	MS.gene64923:CDS	50.0%
	GGATTGATCAACGACTCTGG+TGG	+	chr4.4:43214379-43214398	None:intergenic	50.0%
	GTGGTATGTGTTGGGGTACA+TGG	-	chr4.4:43214213-43214232	MS.gene64923:CDS	50.0%
!!	CTGCTTTTCCTCCTGTATGG+AGG	+	chr4.4:43214093-43214112	None:intergenic	50.0%
	CATCCCCAACACTGAACGAC+GGG	-	chr4.4:43213336-43213355	MS.gene64923:CDS	55.0%
	CGACGATAGTGAGGGAACAG+AGG	+	chr4.4:43213471-43213490	None:intergenic	55.0%
	GAACGACGGGATCTCAGAGA+TGG	-	chr4.4:43213349-43213368	MS.gene64923:CDS	55.0%
	GAAGACGAGCATGGTACGGT+TGG	-	chr4.4:43213836-43213855	MS.gene64923:CDS	55.0%
	GAGATCCCGTCGTTCAGTGT+TGG	+	chr4.4:43213344-43213363	None:intergenic	55.0%
	GATCCCGTCGTTCAGTGTTG+GGG	+	chr4.4:43213342-43213361	None:intergenic	55.0%
	GCATCCCCAACACTGAACGA+CGG	-	chr4.4:43213335-43213354	MS.gene64923:CDS	55.0%
!	TCAGTGTTGGGGATGCTTCG+CGG	+	chr4.4:43213331-43213350	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	43213188	43214474	43213188	ID=MS.gene64923
chr4.4	mRNA	43213188	43214474	43213188	ID=MS.gene64923.t1;Parent=MS.gene64923
chr4.4	exon	43213188	43214474	43213188	ID=MS.gene64923.t1.exon1;Parent=MS.gene64923.t1
chr4.4	CDS	43213188	43214474	43213188	ID=cds.MS.gene64923.t1;Parent=MS.gene64923.t1

Gene Sequence

>MS.gene64923

ATGCTAGGGACTGAGTTTTGTGGCAAATTAATCAGAAGAACAGAAAATTTGGGTCTAAATGAGTACAAATTTCTGCTCAAAGCCATTGTAAGTTGCGGCATTGGCGAACAAACTTACGCCCCAAGAAATGTCATTGAAGGCCGCGAAGCATCCCCAACACTGAACGACGGGATCTCAGAGATGGAAGAGTTTTTCGACGACAGCATTGCAAAACTCCTTGCAAGATCAGCTATTTCCCCTTCCGAAATCGATGTTCTTGTTGTCAACATCTCAATGTTCACCTCTGTTCCCTCACTATCGTCGCTTATCATTAATCGTTACAAAATGAGACACGACGTAAAAGTGTACAATATCACTGGAATGGGTTGTAGTGCTAGTCTTATATCAGTAGATATTGTTAAAAACATTTTCAAATCACAAAGAAACAAGTTAGCACTTTTGGTCACATCAGAGTCTCTTAGTCCAAATTGGTATCCTGGCAATGATAGATCAATGATCTTAGCCAATTGTCTTTTTCGCACCGGTGGTTGTGCCATTCTTTTGACAAACAAAAGATCCTTAAAGAACAAACGTATATTGAAATTGAAGTGTTTAGTCAGGACGCATCACGGCGCCAGAGATGACTCGTATAATTGTTGCCTTAAAAAGGAAGACGAGCATGGTACGGTTGGTTTTTATTTATCAAAAACTCTCCCATTGGTAGCAACAAGAGCTTTTGTTGAGAATTTAAGGGTAATTTCACCCAAAATTTTGCCAATAAGAGAACTTCTTAGGTTTCTGGTTGTATCACTTTTTAAGAAACTCAAGATAGTTAGTTTTTCTAGTTCTAAGTCTTCTAGTGGTGGAGGAACAAGAACTACTAAATCACCATTGAATTTTAAAACTGGTGTTGATCATTTTTGCCTCCATACAGGAGGAAAAGCAGTGATTGATGGAATTGGAAAGAGTTTAGATCTAAGTGAATATGATCTTGAGCCAGCAAGAATGACACTACATCGTTTTGGTAACACTTCTGCTGGTAGTTTGTGGTATGTGTTGGGGTACATGGAAGCAAAAAAGAGGCTCAAAAAAGGTGATAGGGTTTTTATGATAAGCTTTGGTGCTGGATTCAAATGCAATAGTTGCTTATGGGAAGTGATGAAAGATGTTGGAGATGCAAATGTTTGGGAAGATTGTATTGATGATTATCCACCAGAGTCGTTGATCAATCCTTTCATGGAGAAGTATGGTTGGCTCAATGAAGTTGAGGATGCAACCAACTTTGAACTTCCTGATTTTCTTAAGTGA

Protein sequence

>MS.gene64923.t1

MLGTEFCGKLIRRTENLGLNEYKFLLKAIVSCGIGEQTYAPRNVIEGREASPTLNDGISEMEEFFDDSIAKLLARSAISPSEIDVLVVNISMFTSVPSLSSLIINRYKMRHDVKVYNITGMGCSASLISVDIVKNIFKSQRNKLALLVTSESLSPNWYPGNDRSMILANCLFRTGGCAILLTNKRSLKNKRILKLKCLVRTHHGARDDSYNCCLKKEDEHGTVGFYLSKTLPLVATRAFVENLRVISPKILPIRELLRFLVVSLFKKLKIVSFSSSKSSSGGGTRTTKSPLNFKTGVDHFCLHTGGKAVIDGIGKSLDLSEYDLEPARMTLHRFGNTSAGSLWYVLGYMEAKKRLKKGDRVFMISFGAGFKCNSCLWEVMKDVGDANVWEDCIDDYPPESLINPFMEKYGWLNEVEDATNFELPDFLK