Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71346.t1 | XP_003615990.1 | 93.5 | 325 | 18 | 1 | 1 | 322 | 1 | 325 | 5.40E-169 | 603.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71346.t1 | P22195 | 59.2 | 309 | 120 | 4 | 13 | 320 | 11 | 314 | 3.6e-97 | 356.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71346.t1 | Q40372 | 93.5 | 325 | 18 | 1 | 1 | 322 | 1 | 325 | 3.9e-169 | 603.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04926 | MS.gene71346 | 0.807984 | 3.87E-50 | -1.69E-46 |
| MS.gene04932 | MS.gene71346 | 0.811793 | 5.86E-51 | -1.69E-46 |
| MS.gene049549 | MS.gene71346 | 0.836727 | 7.90E-57 | -1.69E-46 |
| MS.gene050344 | MS.gene71346 | 0.833412 | 5.41E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene71346 | 0.822547 | 2.23E-53 | -1.69E-46 |
| MS.gene051996 | MS.gene71346 | 0.830727 | 2.50E-55 | -1.69E-46 |
| MS.gene052211 | MS.gene71346 | 0.819413 | 1.18E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene71346 | 0.841595 | 4.32E-58 | -1.69E-46 |
| MS.gene05240 | MS.gene71346 | 0.855345 | 6.72E-62 | -1.69E-46 |
| MS.gene052702 | MS.gene71346 | 0.822054 | 2.91E-53 | -1.69E-46 |
| MS.gene052705 | MS.gene71346 | 0.802822 | 4.67E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene71346 | 0.803746 | 3.01E-49 | -1.69E-46 |
| MS.gene054138 | MS.gene71346 | 0.830975 | 2.17E-55 | -1.69E-46 |
| MS.gene054146 | MS.gene71346 | 0.808133 | 3.60E-50 | -1.69E-46 |
| MS.gene054277 | MS.gene71346 | 0.904925 | 7.37E-80 | -1.69E-46 |
| MS.gene054742 | MS.gene71346 | 0.865572 | 5.36E-65 | -1.69E-46 |
| MS.gene056076 | MS.gene71346 | 0.803023 | 4.25E-49 | -1.69E-46 |
| MS.gene056330 | MS.gene71346 | 0.851154 | 1.07E-60 | -1.69E-46 |
| MS.gene056590 | MS.gene71346 | 0.800919 | 1.15E-48 | -1.69E-46 |
| MS.gene056690 | MS.gene71346 | 0.818721 | 1.69E-52 | -1.69E-46 |
| MS.gene056691 | MS.gene71346 | 0.826398 | 2.77E-54 | -1.69E-46 |
| MS.gene056715 | MS.gene71346 | 0.803056 | 4.18E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene71346 | 0.804272 | 2.34E-49 | -1.69E-46 |
| MS.gene056920 | MS.gene71346 | 0.865458 | 5.82E-65 | -1.69E-46 |
| MS.gene056922 | MS.gene71346 | 0.846796 | 1.73E-59 | -1.69E-46 |
| MS.gene056923 | MS.gene71346 | 0.851924 | 6.46E-61 | -1.69E-46 |
| MS.gene056924 | MS.gene71346 | 0.839941 | 1.17E-57 | -1.69E-46 |
| MS.gene056925 | MS.gene71346 | 0.804999 | 1.65E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene71346 | 0.831293 | 1.81E-55 | -1.69E-46 |
| MS.gene057544 | MS.gene71346 | 0.819871 | 9.25E-53 | -1.69E-46 |
| MS.gene057547 | MS.gene71346 | 0.800157 | 1.64E-48 | -1.69E-46 |
| MS.gene058177 | MS.gene71346 | 0.831215 | 1.89E-55 | -1.69E-46 |
| MS.gene058381 | MS.gene71346 | 0.819949 | 8.88E-53 | -1.69E-46 |
| MS.gene058450 | MS.gene71346 | 0.824937 | 6.16E-54 | -1.69E-46 |
| MS.gene059039 | MS.gene71346 | 0.814201 | 1.74E-51 | -1.69E-46 |
| MS.gene059043 | MS.gene71346 | 0.805739 | 1.15E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene71346 | 0.802697 | 4.96E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene71346 | 0.851201 | 1.04E-60 | -1.69E-46 |
| MS.gene060205 | MS.gene71346 | 0.802499 | 5.45E-49 | -1.69E-46 |
| MS.gene060578 | MS.gene71346 | 0.803223 | 3.86E-49 | -1.69E-46 |
| MS.gene061092 | MS.gene71346 | 0.811084 | 8.36E-51 | -1.69E-46 |
| MS.gene061094 | MS.gene71346 | 0.815107 | 1.10E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71346.t1 | MTR_5g074860 | 93.538 | 325 | 18 | 1 | 1 | 322 | 1 | 325 | 0.0 | 620 |
| MS.gene71346.t1 | MTR_5g074860 | 82.154 | 325 | 16 | 2 | 1 | 322 | 1 | 286 | 0.0 | 525 |
| MS.gene71346.t1 | MTR_5g074760 | 71.250 | 320 | 92 | 0 | 2 | 321 | 1 | 320 | 1.31e-171 | 479 |
| MS.gene71346.t1 | MTR_5g074740 | 70.938 | 320 | 93 | 0 | 2 | 321 | 1 | 320 | 1.26e-170 | 476 |
| MS.gene71346.t1 | MTR_5g074710 | 70.625 | 320 | 94 | 0 | 2 | 321 | 1 | 320 | 3.38e-170 | 475 |
| MS.gene71346.t1 | MTR_3g467600 | 66.242 | 314 | 104 | 2 | 10 | 321 | 10 | 323 | 1.30e-151 | 428 |
| MS.gene71346.t1 | MTR_4g029170 | 59.937 | 317 | 121 | 4 | 7 | 321 | 8 | 320 | 1.39e-133 | 382 |
| MS.gene71346.t1 | MTR_4g029180 | 62.712 | 295 | 104 | 4 | 29 | 321 | 30 | 320 | 4.99e-130 | 374 |
| MS.gene71346.t1 | MTR_3g466200 | 59.621 | 317 | 118 | 7 | 10 | 321 | 8 | 319 | 2.86e-129 | 372 |
| MS.gene71346.t1 | MTR_3g094650 | 58.075 | 322 | 127 | 5 | 2 | 320 | 4 | 320 | 4.93e-126 | 363 |
| MS.gene71346.t1 | MTR_5g083860 | 58.413 | 315 | 122 | 6 | 10 | 321 | 16 | 324 | 7.76e-125 | 360 |
| MS.gene71346.t1 | MTR_3g094670 | 59.048 | 315 | 120 | 6 | 10 | 320 | 11 | 320 | 1.54e-121 | 352 |
| MS.gene71346.t1 | MTR_4g029200 | 55.108 | 323 | 137 | 5 | 2 | 321 | 20 | 337 | 2.18e-121 | 352 |
| MS.gene71346.t1 | MTR_5g074970 | 56.535 | 329 | 128 | 7 | 2 | 320 | 1 | 324 | 1.39e-120 | 350 |
| MS.gene71346.t1 | MTR_3g072190 | 54.517 | 321 | 136 | 5 | 6 | 321 | 2 | 317 | 1.76e-117 | 342 |
| MS.gene71346.t1 | MTR_2g084010 | 54.574 | 317 | 138 | 5 | 7 | 321 | 5 | 317 | 2.33e-116 | 338 |
| MS.gene71346.t1 | MTR_2g084020 | 53.943 | 317 | 140 | 5 | 7 | 321 | 5 | 317 | 3.89e-116 | 338 |
| MS.gene71346.t1 | MTR_3g094630 | 57.911 | 316 | 124 | 6 | 10 | 321 | 11 | 321 | 4.71e-116 | 338 |
| MS.gene71346.t1 | MTR_2g084080 | 54.114 | 316 | 138 | 6 | 8 | 321 | 6 | 316 | 6.85e-114 | 332 |
| MS.gene71346.t1 | MTR_4g029190 | 53.231 | 325 | 142 | 7 | 2 | 321 | 20 | 339 | 2.91e-113 | 332 |
| MS.gene71346.t1 | MTR_7g072480 | 53.548 | 310 | 138 | 4 | 13 | 321 | 11 | 315 | 1.79e-112 | 329 |
| MS.gene71346.t1 | MTR_1g115900 | 51.077 | 325 | 149 | 6 | 2 | 321 | 1 | 320 | 2.01e-112 | 329 |
| MS.gene71346.t1 | MTR_2g084110 | 53.943 | 317 | 139 | 6 | 7 | 321 | 5 | 316 | 3.02e-112 | 328 |
| MS.gene71346.t1 | MTR_2g084000 | 51.420 | 317 | 147 | 5 | 8 | 321 | 6 | 318 | 1.89e-111 | 326 |
| MS.gene71346.t1 | MTR_7g026990 | 54.110 | 292 | 129 | 4 | 30 | 321 | 35 | 321 | 2.25e-111 | 326 |
| MS.gene71346.t1 | MTR_3g466180 | 53.185 | 314 | 141 | 4 | 9 | 321 | 14 | 322 | 1.38e-110 | 324 |
| MS.gene71346.t1 | MTR_2g084090 | 51.242 | 322 | 150 | 6 | 2 | 321 | 1 | 317 | 1.19e-109 | 322 |
| MS.gene71346.t1 | MTR_7g072510 | 50.633 | 316 | 142 | 5 | 15 | 321 | 1 | 311 | 1.24e-108 | 319 |
| MS.gene71346.t1 | MTR_4g083710 | 50.629 | 318 | 148 | 6 | 9 | 321 | 10 | 323 | 7.82e-107 | 315 |
| MS.gene71346.t1 | MTR_5g074700 | 67.713 | 223 | 58 | 1 | 99 | 321 | 5 | 213 | 6.18e-106 | 308 |
| MS.gene71346.t1 | MTR_8g076820 | 51.307 | 306 | 137 | 5 | 24 | 321 | 28 | 329 | 1.90e-104 | 309 |
| MS.gene71346.t1 | MTR_5g021060 | 50.492 | 305 | 139 | 5 | 25 | 321 | 29 | 329 | 2.75e-102 | 303 |
| MS.gene71346.t1 | MTR_1g054205 | 47.273 | 330 | 161 | 7 | 2 | 322 | 1 | 326 | 2.25e-99 | 296 |
| MS.gene71346.t1 | MTR_4g074995 | 47.785 | 316 | 143 | 7 | 11 | 321 | 9 | 307 | 3.12e-97 | 290 |
| MS.gene71346.t1 | MTR_2g029560 | 46.395 | 319 | 160 | 4 | 11 | 321 | 9 | 324 | 1.02e-95 | 287 |
| MS.gene71346.t1 | MTR_1g022970 | 49.013 | 304 | 144 | 4 | 26 | 321 | 46 | 346 | 1.61e-95 | 286 |
| MS.gene71346.t1 | MTR_3g072190 | 55.906 | 254 | 106 | 4 | 69 | 321 | 2 | 250 | 9.48e-95 | 281 |
| MS.gene71346.t1 | MTR_7g093370 | 46.584 | 322 | 159 | 6 | 9 | 321 | 53 | 370 | 4.71e-94 | 284 |
| MS.gene71346.t1 | MTR_4g122640 | 47.712 | 306 | 150 | 5 | 22 | 321 | 34 | 335 | 1.18e-93 | 281 |
| MS.gene71346.t1 | MTR_4g074990 | 45.483 | 321 | 147 | 7 | 6 | 321 | 7 | 304 | 7.79e-92 | 276 |
| MS.gene71346.t1 | MTR_2g040000 | 47.436 | 312 | 148 | 6 | 21 | 321 | 24 | 330 | 1.55e-91 | 276 |
| MS.gene71346.t1 | MTR_2g028980 | 47.022 | 319 | 158 | 4 | 11 | 321 | 14 | 329 | 5.86e-91 | 275 |
| MS.gene71346.t1 | MTR_4g125940 | 46.933 | 326 | 158 | 6 | 6 | 321 | 8 | 328 | 1.52e-90 | 273 |
| MS.gene71346.t1 | MTR_5g017850 | 46.828 | 331 | 160 | 8 | 1 | 321 | 1 | 325 | 2.00e-90 | 273 |
| MS.gene71346.t1 | MTR_5g017860 | 46.526 | 331 | 161 | 8 | 1 | 321 | 1 | 325 | 1.15e-89 | 271 |
| MS.gene71346.t1 | MTR_4g074980 | 46.006 | 313 | 140 | 5 | 10 | 321 | 9 | 293 | 1.39e-88 | 267 |
| MS.gene71346.t1 | MTR_2g029815 | 45.938 | 320 | 162 | 5 | 10 | 321 | 13 | 329 | 4.09e-88 | 268 |
| MS.gene71346.t1 | MTR_2g029750 | 45.455 | 319 | 163 | 4 | 11 | 321 | 14 | 329 | 4.64e-88 | 268 |
| MS.gene71346.t1 | MTR_4g031140 | 46.906 | 307 | 149 | 5 | 22 | 321 | 24 | 323 | 9.16e-88 | 267 |
| MS.gene71346.t1 | MTR_4g030890 | 47.525 | 303 | 145 | 5 | 26 | 321 | 100 | 395 | 3.95e-87 | 268 |
| MS.gene71346.t1 | MTR_2g029800 | 45.455 | 319 | 163 | 4 | 11 | 321 | 14 | 329 | 1.92e-86 | 264 |
| MS.gene71346.t1 | MTR_5g014100 | 47.097 | 310 | 145 | 7 | 26 | 321 | 26 | 330 | 1.92e-86 | 263 |
| MS.gene71346.t1 | MTR_2g029860 | 43.750 | 320 | 169 | 4 | 11 | 322 | 14 | 330 | 1.44e-85 | 261 |
| MS.gene71346.t1 | MTR_5g049280 | 44.268 | 314 | 161 | 7 | 19 | 321 | 26 | 336 | 1.45e-85 | 261 |
| MS.gene71346.t1 | MTR_2g029740 | 45.426 | 317 | 160 | 6 | 11 | 318 | 14 | 326 | 5.21e-85 | 260 |
| MS.gene71346.t1 | MTR_2g029830 | 45.130 | 308 | 158 | 4 | 22 | 321 | 24 | 328 | 6.54e-85 | 260 |
| MS.gene71346.t1 | MTR_2g029820 | 44.514 | 319 | 166 | 4 | 11 | 321 | 14 | 329 | 6.91e-85 | 260 |
| MS.gene71346.t1 | MTR_2g029850 | 46.082 | 319 | 161 | 5 | 11 | 321 | 14 | 329 | 3.61e-84 | 258 |
| MS.gene71346.t1 | MTR_2g029730 | 47.059 | 306 | 151 | 5 | 24 | 321 | 23 | 325 | 3.99e-84 | 258 |
| MS.gene71346.t1 | MTR_1g101830 | 43.574 | 319 | 163 | 9 | 11 | 321 | 12 | 321 | 3.02e-83 | 254 |
| MS.gene71346.t1 | MTR_4g125940 | 50.542 | 277 | 122 | 6 | 55 | 321 | 2 | 273 | 1.10e-82 | 251 |
| MS.gene71346.t1 | MTR_1g025980 | 43.161 | 329 | 168 | 9 | 2 | 322 | 1 | 318 | 3.27e-82 | 252 |
| MS.gene71346.t1 | MTR_2g029910 | 43.614 | 321 | 169 | 6 | 11 | 322 | 15 | 332 | 1.79e-80 | 248 |
| MS.gene71346.t1 | MTR_5g022870 | 43.438 | 320 | 162 | 10 | 10 | 321 | 7 | 315 | 1.01e-79 | 245 |
| MS.gene71346.t1 | MTR_4g074980 | 49.194 | 248 | 118 | 5 | 10 | 252 | 9 | 253 | 8.67e-79 | 241 |
| MS.gene71346.t1 | MTR_1g077000 | 40.299 | 335 | 176 | 8 | 2 | 321 | 1 | 326 | 3.63e-78 | 242 |
| MS.gene71346.t1 | MTR_0155s0040 | 41.176 | 323 | 178 | 9 | 2 | 321 | 1 | 314 | 5.19e-78 | 241 |
| MS.gene71346.t1 | MTR_3g092990 | 39.938 | 323 | 178 | 7 | 10 | 321 | 8 | 325 | 2.79e-74 | 232 |
| MS.gene71346.t1 | MTR_8g075100 | 41.935 | 310 | 161 | 9 | 20 | 321 | 20 | 318 | 2.27e-73 | 229 |
| MS.gene71346.t1 | MTR_7g029030 | 40.881 | 318 | 176 | 9 | 9 | 320 | 7 | 318 | 8.02e-71 | 223 |
| MS.gene71346.t1 | MTR_1g038680 | 41.584 | 303 | 162 | 7 | 30 | 321 | 33 | 331 | 1.53e-70 | 222 |
| MS.gene71346.t1 | MTR_2g088770 | 41.141 | 333 | 175 | 10 | 1 | 321 | 1 | 324 | 8.48e-70 | 220 |
| MS.gene71346.t1 | MTR_6g027440 | 39.308 | 318 | 179 | 8 | 8 | 319 | 2 | 311 | 9.72e-69 | 217 |
| MS.gene71346.t1 | MTR_1g086320 | 37.805 | 328 | 189 | 6 | 5 | 321 | 9 | 332 | 2.71e-67 | 214 |
| MS.gene71346.t1 | MTR_1g086490 | 37.910 | 335 | 186 | 5 | 5 | 321 | 9 | 339 | 4.08e-67 | 214 |
| MS.gene71346.t1 | MTR_2g029830 | 45.349 | 258 | 130 | 4 | 72 | 321 | 6 | 260 | 1.04e-66 | 211 |
| MS.gene71346.t1 | MTR_7g086820 | 38.870 | 301 | 170 | 7 | 24 | 319 | 18 | 309 | 1.01e-65 | 209 |
| MS.gene71346.t1 | MTR_2g008710 | 41.196 | 301 | 155 | 9 | 30 | 318 | 31 | 321 | 2.78e-65 | 209 |
| MS.gene71346.t1 | MTR_7g086870 | 39.322 | 295 | 162 | 8 | 30 | 319 | 26 | 308 | 4.25e-65 | 207 |
| MS.gene71346.t1 | MTR_4g127670 | 41.667 | 312 | 153 | 11 | 25 | 320 | 23 | 321 | 4.56e-64 | 205 |
| MS.gene71346.t1 | MTR_7g107520 | 40.549 | 328 | 169 | 11 | 8 | 321 | 4 | 319 | 6.37e-64 | 205 |
| MS.gene71346.t1 | MTR_4g114210 | 39.815 | 324 | 170 | 11 | 10 | 320 | 7 | 318 | 3.17e-63 | 203 |
| MS.gene71346.t1 | MTR_1g009750 | 40.120 | 334 | 179 | 11 | 2 | 321 | 1 | 327 | 3.42e-63 | 203 |
| MS.gene71346.t1 | MTR_3g092990 | 37.771 | 323 | 174 | 8 | 10 | 321 | 8 | 314 | 1.22e-62 | 201 |
| MS.gene71346.t1 | MTR_4g046713 | 37.195 | 328 | 187 | 8 | 2 | 318 | 3 | 322 | 2.39e-62 | 201 |
| MS.gene71346.t1 | MTR_5g016010 | 37.346 | 324 | 184 | 9 | 9 | 318 | 7 | 325 | 3.68e-62 | 201 |
| MS.gene71346.t1 | MTR_2g099175 | 39.088 | 307 | 164 | 9 | 26 | 319 | 36 | 332 | 9.62e-61 | 197 |
| MS.gene71346.t1 | MTR_3g072210 | 51.872 | 187 | 85 | 4 | 137 | 321 | 54 | 237 | 1.36e-60 | 194 |
| MS.gene71346.t1 | MTR_4g095450 | 38.679 | 318 | 174 | 10 | 13 | 318 | 12 | 320 | 6.69e-60 | 194 |
| MS.gene71346.t1 | MTR_1g090760 | 35.604 | 323 | 189 | 9 | 10 | 318 | 9 | 326 | 8.71e-59 | 192 |
| MS.gene71346.t1 | MTR_4g133800 | 38.333 | 300 | 163 | 10 | 31 | 321 | 46 | 332 | 1.30e-58 | 192 |
| MS.gene71346.t1 | MTR_8g062780 | 36.646 | 322 | 188 | 8 | 7 | 318 | 5 | 320 | 1.56e-58 | 191 |
| MS.gene71346.t1 | MTR_2g077990 | 37.202 | 336 | 165 | 9 | 26 | 321 | 76 | 405 | 1.09e-57 | 191 |
| MS.gene71346.t1 | MTR_4g087965 | 36.585 | 328 | 188 | 10 | 4 | 318 | 22 | 342 | 6.74e-57 | 187 |
| MS.gene71346.t1 | MTR_5g074770 | 80.000 | 110 | 17 | 1 | 213 | 322 | 5 | 109 | 7.21e-57 | 179 |
| MS.gene71346.t1 | MTR_0286s0010 | 34.985 | 323 | 194 | 8 | 9 | 321 | 17 | 333 | 7.44e-57 | 187 |
| MS.gene71346.t1 | MTR_6g008075 | 34.985 | 323 | 194 | 8 | 9 | 321 | 17 | 333 | 7.44e-57 | 187 |
| MS.gene71346.t1 | MTR_4g132490 | 33.993 | 303 | 188 | 5 | 26 | 321 | 29 | 326 | 1.55e-56 | 186 |
| MS.gene71346.t1 | MTR_2g078610 | 36.607 | 336 | 167 | 9 | 26 | 321 | 76 | 405 | 3.25e-56 | 187 |
| MS.gene71346.t1 | MTR_2g067440 | 37.126 | 334 | 165 | 10 | 26 | 321 | 60 | 386 | 1.47e-55 | 185 |
| MS.gene71346.t1 | MTR_2g437770 | 37.304 | 319 | 173 | 10 | 17 | 321 | 35 | 340 | 4.44e-55 | 183 |
| MS.gene71346.t1 | MTR_6g043280 | 37.086 | 302 | 173 | 9 | 26 | 321 | 41 | 331 | 1.27e-54 | 181 |
| MS.gene71346.t1 | MTR_6g043240 | 38.361 | 305 | 173 | 10 | 21 | 321 | 37 | 330 | 4.89e-54 | 180 |
| MS.gene71346.t1 | MTR_2g008160 | 37.097 | 310 | 172 | 10 | 22 | 318 | 20 | 319 | 2.69e-53 | 177 |
| MS.gene71346.t1 | MTR_1g009750 | 36.527 | 334 | 174 | 11 | 2 | 321 | 1 | 310 | 8.79e-52 | 173 |
| MS.gene71346.t1 | MTR_1g066710 | 34.098 | 305 | 187 | 7 | 24 | 321 | 25 | 322 | 1.21e-50 | 171 |
| MS.gene71346.t1 | MTR_6g043460 | 35.152 | 330 | 193 | 10 | 2 | 318 | 3 | 324 | 1.70e-50 | 171 |
| MS.gene71346.t1 | MTR_2g078280 | 35.913 | 323 | 161 | 9 | 26 | 308 | 76 | 392 | 7.31e-50 | 171 |
| MS.gene71346.t1 | MTR_2g067450 | 35.370 | 311 | 174 | 9 | 26 | 321 | 11 | 309 | 1.36e-49 | 167 |
| MS.gene71346.t1 | MTR_3g105790 | 34.251 | 327 | 196 | 6 | 2 | 318 | 1 | 318 | 3.83e-49 | 167 |
| MS.gene71346.t1 | MTR_2g008730 | 35.404 | 322 | 161 | 10 | 9 | 318 | 11 | 297 | 1.35e-48 | 165 |
| MS.gene71346.t1 | MTR_1g066380 | 33.010 | 309 | 185 | 8 | 24 | 321 | 25 | 322 | 5.29e-47 | 161 |
| MS.gene71346.t1 | MTR_1g066640 | 32.686 | 309 | 186 | 8 | 24 | 321 | 25 | 322 | 5.01e-45 | 156 |
| MS.gene71346.t1 | MTR_4g132110 | 31.889 | 323 | 204 | 7 | 2 | 318 | 12 | 324 | 8.13e-45 | 156 |
| MS.gene71346.t1 | MTR_7g072490 | 40.650 | 246 | 86 | 6 | 72 | 316 | 2 | 188 | 3.43e-44 | 150 |
| MS.gene71346.t1 | MTR_5g033470 | 32.131 | 305 | 185 | 10 | 30 | 319 | 77 | 374 | 3.75e-44 | 155 |
| MS.gene71346.t1 | MTR_2g008160 | 34.868 | 304 | 152 | 10 | 22 | 318 | 20 | 284 | 6.90e-44 | 152 |
| MS.gene71346.t1 | MTR_1g066680 | 32.248 | 307 | 185 | 9 | 26 | 321 | 27 | 321 | 1.42e-43 | 152 |
| MS.gene71346.t1 | MTR_4g132110 | 31.402 | 328 | 204 | 8 | 2 | 318 | 12 | 329 | 1.99e-42 | 150 |
| MS.gene71346.t1 | MTR_0147s0010 | 32.012 | 328 | 174 | 10 | 23 | 321 | 74 | 381 | 2.28e-42 | 150 |
| MS.gene71346.t1 | MTR_3g072260 | 57.364 | 129 | 50 | 2 | 10 | 134 | 6 | 133 | 7.71e-42 | 142 |
| MS.gene71346.t1 | MTR_2g029880 | 43.085 | 188 | 85 | 5 | 144 | 321 | 12 | 187 | 6.76e-40 | 139 |
| MS.gene71346.t1 | MTR_2g008160 | 45.614 | 171 | 86 | 5 | 30 | 200 | 28 | 191 | 1.68e-39 | 138 |
| MS.gene71346.t1 | MTR_1g066380 | 32.700 | 263 | 155 | 8 | 70 | 321 | 3 | 254 | 2.65e-37 | 134 |
| MS.gene71346.t1 | MTR_3g105790 | 35.417 | 240 | 140 | 5 | 89 | 318 | 8 | 242 | 1.24e-33 | 124 |
| MS.gene71346.t1 | MTR_3g462850 | 40.000 | 140 | 73 | 5 | 193 | 321 | 9 | 148 | 1.35e-23 | 95.1 |
| MS.gene71346.t1 | MTR_2g078560 | 31.441 | 229 | 114 | 7 | 132 | 321 | 95 | 319 | 8.46e-23 | 97.1 |
| MS.gene71346.t1 | MTR_4g031040 | 36.310 | 168 | 68 | 3 | 87 | 254 | 3 | 131 | 9.78e-22 | 89.7 |
| MS.gene71346.t1 | MTR_2g077980 | 29.758 | 289 | 152 | 11 | 78 | 321 | 1 | 283 | 1.74e-21 | 92.8 |
| MS.gene71346.t1 | MTR_7g086790 | 35.263 | 190 | 104 | 8 | 73 | 261 | 17 | 188 | 2.76e-20 | 87.4 |
| MS.gene71346.t1 | MTR_5g058120 | 35.897 | 156 | 93 | 4 | 164 | 318 | 6 | 155 | 1.52e-19 | 86.7 |
| MS.gene71346.t1 | MTR_2g029930 | 42.056 | 107 | 37 | 2 | 9 | 104 | 2 | 94 | 5.70e-18 | 78.6 |
| MS.gene71346.t1 | MTR_1g089005 | 38.060 | 134 | 75 | 3 | 12 | 139 | 1 | 132 | 7.65e-18 | 79.7 |
| MS.gene71346.t1 | MTR_4g114220 | 48.193 | 83 | 32 | 3 | 52 | 134 | 29 | 100 | 2.04e-17 | 78.2 |
| MS.gene71346.t1 | MTR_6g048160 | 52.055 | 73 | 30 | 3 | 65 | 137 | 22 | 89 | 9.54e-17 | 74.7 |
| MS.gene71346.t1 | MTR_3g086710 | 53.125 | 64 | 30 | 0 | 8 | 71 | 1 | 64 | 3.28e-14 | 67.8 |
| MS.gene71346.t1 | MTR_3g107060 | 25.316 | 316 | 155 | 12 | 9 | 303 | 57 | 312 | 1.31e-13 | 70.9 |
| MS.gene71346.t1 | MTR_4g073410 | 28.195 | 266 | 139 | 10 | 47 | 304 | 22 | 243 | 1.32e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71346.t1 | AT5G05340 | 58.472 | 301 | 117 | 5 | 24 | 321 | 28 | 323 | 5.68e-123 | 356 |
| MS.gene71346.t1 | AT5G58400 | 52.848 | 316 | 139 | 7 | 10 | 320 | 13 | 323 | 3.35e-107 | 316 |
| MS.gene71346.t1 | AT5G58390 | 53.628 | 317 | 138 | 6 | 8 | 320 | 3 | 314 | 3.76e-106 | 313 |
| MS.gene71346.t1 | AT1G14540 | 50.000 | 316 | 151 | 6 | 9 | 321 | 3 | 314 | 5.98e-105 | 310 |
| MS.gene71346.t1 | AT1G14550 | 49.682 | 314 | 148 | 7 | 11 | 318 | 8 | 317 | 2.29e-102 | 303 |
| MS.gene71346.t1 | AT4G36430 | 49.342 | 304 | 142 | 5 | 26 | 321 | 30 | 329 | 1.15e-101 | 302 |
| MS.gene71346.t1 | AT2G18150 | 48.684 | 304 | 144 | 5 | 26 | 321 | 36 | 335 | 2.16e-101 | 301 |
| MS.gene71346.t1 | AT5G66390 | 46.809 | 329 | 163 | 5 | 1 | 321 | 8 | 332 | 7.31e-101 | 300 |
| MS.gene71346.t1 | AT2G18140 | 48.193 | 332 | 148 | 7 | 10 | 321 | 7 | 334 | 4.50e-100 | 298 |
| MS.gene71346.t1 | AT5G06720 | 47.205 | 322 | 159 | 5 | 9 | 322 | 15 | 333 | 6.44e-100 | 298 |
| MS.gene71346.t1 | AT5G06730 | 45.963 | 322 | 163 | 5 | 9 | 322 | 16 | 334 | 1.80e-95 | 287 |
| MS.gene71346.t1 | AT3G50990 | 48.693 | 306 | 145 | 6 | 24 | 321 | 39 | 340 | 6.64e-95 | 285 |
| MS.gene71346.t1 | AT1G44970 | 48.684 | 304 | 145 | 4 | 26 | 321 | 45 | 345 | 1.23e-94 | 285 |
| MS.gene71346.t1 | AT4G08770 | 47.097 | 310 | 151 | 6 | 22 | 321 | 20 | 326 | 1.34e-89 | 271 |
| MS.gene71346.t1 | AT4G08780 | 45.806 | 310 | 155 | 6 | 22 | 321 | 20 | 326 | 5.26e-88 | 268 |
| MS.gene71346.t1 | AT2G38380 | 46.602 | 309 | 153 | 5 | 22 | 321 | 27 | 332 | 1.05e-87 | 267 |
| MS.gene71346.t1 | AT1G49570 | 47.697 | 304 | 143 | 7 | 26 | 318 | 48 | 346 | 1.84e-87 | 266 |
| MS.gene71346.t1 | AT2G38390 | 46.602 | 309 | 153 | 5 | 22 | 321 | 27 | 332 | 7.88e-87 | 265 |
| MS.gene71346.t1 | AT5G19880 | 45.921 | 331 | 158 | 8 | 6 | 321 | 4 | 328 | 1.32e-86 | 263 |
| MS.gene71346.t1 | AT1G68850 | 41.742 | 333 | 171 | 8 | 9 | 321 | 5 | 334 | 1.53e-86 | 263 |
| MS.gene71346.t1 | AT4G16270 | 48.173 | 301 | 140 | 7 | 30 | 321 | 54 | 347 | 2.69e-86 | 263 |
| MS.gene71346.t1 | AT2G22420 | 42.368 | 321 | 170 | 6 | 8 | 321 | 6 | 318 | 5.98e-86 | 262 |
| MS.gene71346.t1 | AT3G32980 | 46.129 | 310 | 154 | 7 | 22 | 321 | 27 | 333 | 1.15e-85 | 262 |
| MS.gene71346.t1 | AT5G51890 | 44.109 | 331 | 164 | 11 | 2 | 321 | 1 | 321 | 4.85e-85 | 259 |
| MS.gene71346.t1 | AT3G49120 | 46.104 | 308 | 153 | 7 | 24 | 321 | 30 | 334 | 6.77e-84 | 257 |
| MS.gene71346.t1 | AT3G49110 | 45.806 | 310 | 155 | 7 | 22 | 321 | 29 | 335 | 8.95e-84 | 257 |
| MS.gene71346.t1 | AT2G35380 | 46.201 | 329 | 158 | 7 | 7 | 321 | 11 | 334 | 9.69e-84 | 256 |
| MS.gene71346.t1 | AT5G42180 | 44.923 | 325 | 152 | 11 | 10 | 322 | 8 | 317 | 4.13e-83 | 254 |
| MS.gene71346.t1 | AT5G19890 | 46.130 | 323 | 155 | 9 | 9 | 321 | 13 | 326 | 4.48e-83 | 254 |
| MS.gene71346.t1 | AT3G01190 | 43.161 | 329 | 165 | 10 | 2 | 319 | 1 | 318 | 2.28e-76 | 237 |
| MS.gene71346.t1 | AT1G71695 | 43.750 | 304 | 158 | 7 | 21 | 318 | 39 | 335 | 2.32e-74 | 233 |
| MS.gene71346.t1 | AT4G33420 | 41.456 | 316 | 173 | 9 | 9 | 321 | 18 | 324 | 4.24e-72 | 226 |
| MS.gene71346.t1 | AT4G33420 | 41.456 | 316 | 173 | 9 | 9 | 321 | 65 | 371 | 1.69e-71 | 226 |
| MS.gene71346.t1 | AT5G15180 | 41.284 | 327 | 168 | 10 | 10 | 321 | 11 | 328 | 5.09e-71 | 223 |
| MS.gene71346.t1 | AT3G03670 | 38.871 | 319 | 180 | 7 | 10 | 319 | 6 | 318 | 1.17e-67 | 214 |
| MS.gene71346.t1 | AT5G17820 | 39.498 | 319 | 171 | 10 | 10 | 320 | 7 | 311 | 8.47e-67 | 212 |
| MS.gene71346.t1 | AT4G26010 | 39.809 | 314 | 175 | 10 | 9 | 319 | 4 | 306 | 9.02e-67 | 212 |
| MS.gene71346.t1 | AT4G11290 | 39.252 | 321 | 178 | 8 | 9 | 318 | 8 | 322 | 1.22e-66 | 212 |
| MS.gene71346.t1 | AT4G26010 | 39.809 | 314 | 175 | 10 | 9 | 319 | 32 | 334 | 1.39e-66 | 212 |
| MS.gene71346.t1 | AT1G05240 | 38.796 | 299 | 166 | 7 | 30 | 318 | 30 | 321 | 4.28e-66 | 211 |
| MS.gene71346.t1 | AT1G05250 | 38.796 | 299 | 166 | 7 | 30 | 318 | 30 | 321 | 4.28e-66 | 211 |
| MS.gene71346.t1 | AT5G17820 | 39.498 | 319 | 171 | 10 | 10 | 320 | 60 | 364 | 6.72e-66 | 211 |
| MS.gene71346.t1 | AT3G21770 | 39.683 | 315 | 171 | 9 | 15 | 318 | 18 | 324 | 8.71e-65 | 207 |
| MS.gene71346.t1 | AT1G05260 | 37.700 | 313 | 180 | 8 | 15 | 318 | 15 | 321 | 2.08e-64 | 206 |
| MS.gene71346.t1 | AT5G40150 | 37.785 | 307 | 181 | 6 | 17 | 318 | 23 | 324 | 4.16e-64 | 206 |
| MS.gene71346.t1 | AT5G64120 | 41.472 | 299 | 158 | 8 | 30 | 321 | 39 | 327 | 4.21e-64 | 206 |
| MS.gene71346.t1 | AT4G37530 | 39.610 | 308 | 170 | 8 | 22 | 318 | 23 | 325 | 8.62e-63 | 202 |
| MS.gene71346.t1 | AT3G28200 | 37.374 | 297 | 177 | 6 | 26 | 318 | 21 | 312 | 4.61e-62 | 200 |
| MS.gene71346.t1 | AT2G35380 | 47.581 | 248 | 111 | 7 | 88 | 321 | 4 | 246 | 8.91e-62 | 197 |
| MS.gene71346.t1 | AT5G14130 | 36.449 | 321 | 182 | 8 | 10 | 318 | 16 | 326 | 8.72e-61 | 197 |
| MS.gene71346.t1 | AT1G34510 | 39.274 | 303 | 172 | 9 | 19 | 319 | 14 | 306 | 2.20e-60 | 196 |
| MS.gene71346.t1 | AT5G14130 | 36.449 | 321 | 182 | 8 | 10 | 318 | 57 | 367 | 2.60e-60 | 197 |
| MS.gene71346.t1 | AT4G37520 | 38.889 | 306 | 171 | 8 | 24 | 318 | 25 | 325 | 3.47e-60 | 196 |
| MS.gene71346.t1 | AT2G41480 | 36.585 | 328 | 182 | 10 | 10 | 321 | 10 | 327 | 7.38e-60 | 195 |
| MS.gene71346.t1 | AT1G24110 | 35.110 | 319 | 189 | 8 | 10 | 318 | 8 | 318 | 2.08e-58 | 191 |
| MS.gene71346.t1 | AT4G37520 | 38.562 | 306 | 169 | 9 | 24 | 318 | 25 | 322 | 4.35e-58 | 190 |
| MS.gene71346.t1 | AT4G33870 | 33.333 | 342 | 177 | 9 | 24 | 321 | 66 | 400 | 1.06e-57 | 191 |
| MS.gene71346.t1 | AT4G25980 | 36.474 | 329 | 190 | 9 | 2 | 318 | 1 | 322 | 6.42e-57 | 187 |
| MS.gene71346.t1 | AT1G30870 | 37.179 | 312 | 174 | 9 | 19 | 320 | 44 | 343 | 9.98e-57 | 187 |
| MS.gene71346.t1 | AT5G39580 | 39.062 | 320 | 176 | 11 | 11 | 321 | 9 | 318 | 1.24e-56 | 186 |
| MS.gene71346.t1 | AT5G67400 | 37.349 | 332 | 186 | 10 | 2 | 318 | 1 | 325 | 3.02e-56 | 185 |
| MS.gene71346.t1 | AT2G18980 | 36.747 | 332 | 188 | 9 | 2 | 321 | 1 | 322 | 5.38e-56 | 184 |
| MS.gene71346.t1 | AT1G77100 | 39.557 | 316 | 179 | 10 | 9 | 318 | 6 | 315 | 1.23e-55 | 184 |
| MS.gene71346.t1 | AT3G49960 | 37.461 | 323 | 182 | 10 | 9 | 318 | 10 | 325 | 1.40e-55 | 184 |
| MS.gene71346.t1 | AT5G22410 | 35.216 | 301 | 174 | 9 | 30 | 319 | 32 | 322 | 4.43e-55 | 182 |
| MS.gene71346.t1 | AT5G47000 | 34.069 | 317 | 196 | 7 | 9 | 318 | 16 | 326 | 5.88e-55 | 182 |
| MS.gene71346.t1 | AT4G17690 | 38.742 | 302 | 167 | 9 | 26 | 318 | 26 | 318 | 8.12e-55 | 182 |
| MS.gene71346.t1 | AT4G30170 | 37.580 | 314 | 168 | 11 | 23 | 321 | 24 | 324 | 8.43e-55 | 181 |
| MS.gene71346.t1 | AT5G64100 | 39.274 | 303 | 160 | 11 | 28 | 318 | 37 | 327 | 4.10e-54 | 180 |
| MS.gene71346.t1 | AT2G39040 | 39.297 | 313 | 164 | 11 | 26 | 321 | 46 | 349 | 6.85e-54 | 180 |
| MS.gene71346.t1 | AT5G64110 | 39.818 | 329 | 168 | 12 | 12 | 321 | 12 | 329 | 7.19e-54 | 179 |
| MS.gene71346.t1 | AT4G37530 | 40.541 | 259 | 140 | 7 | 22 | 269 | 23 | 278 | 9.51e-54 | 177 |
| MS.gene71346.t1 | AT2G24800 | 35.484 | 310 | 178 | 7 | 24 | 321 | 29 | 328 | 2.36e-51 | 173 |
| MS.gene71346.t1 | AT2G34060 | 36.337 | 344 | 184 | 14 | 4 | 319 | 7 | 343 | 5.61e-51 | 172 |
| MS.gene71346.t1 | AT4G31760 | 32.635 | 334 | 202 | 7 | 2 | 321 | 1 | 325 | 1.64e-50 | 171 |
| MS.gene71346.t1 | AT2G43480 | 35.443 | 316 | 178 | 11 | 21 | 321 | 30 | 334 | 7.39e-50 | 169 |
| MS.gene71346.t1 | AT5G24070 | 35.599 | 309 | 173 | 11 | 26 | 319 | 35 | 332 | 4.41e-48 | 164 |
| MS.gene71346.t1 | AT3G17070 | 32.143 | 336 | 203 | 10 | 4 | 321 | 10 | 338 | 8.86e-47 | 161 |
| MS.gene71346.t1 | AT2G37130 | 32.131 | 305 | 196 | 6 | 23 | 321 | 27 | 326 | 6.88e-45 | 156 |
| MS.gene71346.t1 | AT4G21960 | 32.776 | 299 | 189 | 6 | 26 | 318 | 31 | 323 | 8.58e-45 | 155 |
| MS.gene71346.t1 | AT2G37130 | 32.107 | 299 | 192 | 6 | 29 | 321 | 2 | 295 | 1.69e-44 | 154 |
| MS.gene71346.t1 | AT4G25980 | 41.000 | 200 | 110 | 6 | 2 | 200 | 46 | 238 | 1.16e-37 | 136 |
| MS.gene71346.t1 | AT5G39580 | 38.667 | 225 | 122 | 8 | 11 | 227 | 9 | 225 | 8.10e-35 | 127 |
| MS.gene71346.t1 | AT3G17070 | 33.083 | 266 | 158 | 10 | 68 | 321 | 18 | 275 | 3.86e-34 | 126 |
| MS.gene71346.t1 | AT2G24800 | 41.520 | 171 | 93 | 3 | 24 | 194 | 29 | 192 | 7.81e-32 | 119 |
| MS.gene71346.t1 | AT4G32320 | 27.857 | 280 | 135 | 10 | 37 | 303 | 96 | 321 | 1.65e-14 | 73.6 |
| MS.gene71346.t1 | AT4G35000 | 28.309 | 272 | 131 | 13 | 47 | 304 | 21 | 242 | 1.46e-13 | 70.5 |
| MS.gene71346.t1 | AT3G42570 | 31.469 | 143 | 82 | 5 | 54 | 194 | 19 | 147 | 1.20e-11 | 62.4 |
| MS.gene71346.t1 | AT4G35970 | 25.926 | 270 | 139 | 11 | 47 | 304 | 20 | 240 | 2.14e-11 | 63.9 |
| MS.gene71346.t1 | AT4G35970 | 30.000 | 180 | 97 | 7 | 47 | 218 | 20 | 178 | 2.21e-11 | 63.2 |
Find 60 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTGATTGAATTGATATT+TGG | 0.149569 | 5.3:+59479392 | None:intergenic |
| TTCTGATCAACAATTGTTTA+AGG | 0.149991 | 5.3:-59478716 | MS.gene71346:CDS |
| AAAGACCTTGTAGCTCTTTC+TGG | 0.185151 | 5.3:-59478946 | MS.gene71346:CDS |
| TTGTTCTCCATGCAATTCTT+AGG | 0.198915 | 5.3:-59480719 | MS.gene71346:CDS |
| ATGGAGAACAACTGACTTTA+TGG | 0.215067 | 5.3:+59480731 | None:intergenic |
| TTGTTGTCTCCACCATTTCT+AGG | 0.241506 | 5.3:+59478820 | None:intergenic |
| TTTCTGGTGGTCACACTATA+GGG | 0.295800 | 5.3:-59478930 | MS.gene71346:CDS |
| CTTTCTGGTGGTCACACTAT+AGG | 0.303710 | 5.3:-59478931 | MS.gene71346:CDS |
| GGGAACATCAAGCCTCTTAC+TGG | 0.307586 | 5.3:-59478601 | MS.gene71346:CDS |
| AATATTCCTTGTCCTTGTTA+TGG | 0.317798 | 5.3:-59480829 | MS.gene71346:CDS |
| TCTGATCAACAATTGTTTAA+GGG | 0.352120 | 5.3:-59478715 | MS.gene71346:CDS |
| TCGCCTTGTTTCCCAGTAAG+AGG | 0.368669 | 5.3:+59478589 | None:intergenic |
| TAAGACTTCTTTGATCAAGA+TGG | 0.398788 | 5.3:-59478623 | MS.gene71346:CDS |
| CTTAAAGATGCTGCAAAAGT+AGG | 0.404137 | 5.3:+59478853 | None:intergenic |
| AGGTAGTGAAAGTGACAAAT+TGG | 0.414766 | 5.3:-59478689 | MS.gene71346:CDS |
| ATAGAGATTTGCTATACAAA+AGG | 0.417509 | 5.3:-59478750 | MS.gene71346:CDS |
| TGTTCTCCATGCAATTCTTA+GGG | 0.432270 | 5.3:-59480718 | MS.gene71346:CDS |
| AGGAAGACTTGTCCTAGAAA+TGG | 0.434931 | 5.3:-59478832 | MS.gene71346:CDS |
| TAGAGATTTGCTATACAAAA+GGG | 0.436085 | 5.3:-59478749 | MS.gene71346:CDS |
| AAGACTTCTTTGATCAAGAT+GGG | 0.455664 | 5.3:-59478622 | MS.gene71346:CDS |
| AAATCTCTAGCAAAAGCTAA+AGG | 0.455926 | 5.3:+59478646 | None:intergenic |
| ACAATTGTTGATCAGAATGA+AGG | 0.465894 | 5.3:+59478722 | None:intergenic |
| AATCTCTAGCAAAAGCTAAA+GGG | 0.471645 | 5.3:+59478647 | None:intergenic |
| TTATGGTTGGTAATGCTTGA+GGG | 0.474257 | 5.3:+59480748 | None:intergenic |
| TTACATTGACGAAGCAATCA+TGG | 0.486125 | 5.3:+59480658 | None:intergenic |
| GATGATACCCCAAATTTCAC+TGG | 0.487620 | 5.3:-59479431 | MS.gene71346:CDS |
| CAACAATTGTTTAAGGGACT+AGG | 0.490480 | 5.3:-59478709 | MS.gene71346:CDS |
| GGAGTAAGCCATGCGTTGGT+AGG | 0.494219 | 5.3:+59480792 | None:intergenic |
| TTAAAGATGCTGCAAAAGTA+GGG | 0.540881 | 5.3:+59478854 | None:intergenic |
| GAGTAAGCCATGCGTTGGTA+GGG | 0.543916 | 5.3:+59480793 | None:intergenic |
| GTCACACTATAGGGTTTGCT+AGG | 0.550006 | 5.3:-59478921 | MS.gene71346:CDS |
| TTTCTCCCCAGTGAAATTTG+GGG | 0.550604 | 5.3:+59479424 | None:intergenic |
| AGCTGTGAGAAGTTGAATGT+TGG | 0.551695 | 5.3:+59479003 | None:intergenic |
| CCAAATATCAATTCAATCAG+AGG | 0.553734 | 5.3:-59479392 | MS.gene71346:CDS |
| ATTTCAAATTTCAAATCACA+AGG | 0.563348 | 5.3:-59478979 | MS.gene71346:CDS |
| TACAGAATCACGAGCTGCTG+TGG | 0.565085 | 5.3:+59479289 | None:intergenic |
| GGAACATCAAGCCTCTTACT+GGG | 0.568377 | 5.3:-59478600 | MS.gene71346:CDS |
| GAGAAGTTGAATGTTGGAGA+TGG | 0.571079 | 5.3:+59479009 | None:intergenic |
| AGAACAACTGACTTTATGGT+TGG | 0.571386 | 5.3:+59480735 | None:intergenic |
| TAGTGAAAGTGACAAATTGG+TGG | 0.576660 | 5.3:-59478686 | MS.gene71346:CDS |
| TTTATGGTTGGTAATGCTTG+AGG | 0.580918 | 5.3:+59480747 | None:intergenic |
| GACCTTGTAGCTCTTTCTGG+TGG | 0.589326 | 5.3:-59478943 | MS.gene71346:CDS |
| ATGATACCCCAAATTTCACT+GGG | 0.597994 | 5.3:-59479430 | MS.gene71346:CDS |
| ATGAGGAGTAAGCCATGCGT+TGG | 0.599175 | 5.3:+59480788 | None:intergenic |
| TATTGATCCCTACCAACGCA+TGG | 0.600690 | 5.3:-59480800 | MS.gene71346:CDS |
| AAGCCTCTTACTGGGAAACA+AGG | 0.600820 | 5.3:-59478592 | MS.gene71346:CDS |
| AAGACTTGTCCTAGAAATGG+TGG | 0.602280 | 5.3:-59478829 | MS.gene71346:CDS |
| ATATCAGCACAAGATACCAC+AGG | 0.608181 | 5.3:+59479317 | None:intergenic |
| AGATTCGACTCAATTGCAGA+AGG | 0.610654 | 5.3:-59478567 | MS.gene71346:CDS |
| CTTGTAGGAGTGAAATCAAG+TGG | 0.621819 | 5.3:+59478790 | None:intergenic |
| AGACTTCTTTGATCAAGATG+GGG | 0.622644 | 5.3:-59478621 | MS.gene71346:CDS |
| GCAGTTGATAAAGTATGCAA+AGG | 0.624221 | 5.3:-59479341 | MS.gene71346:CDS |
| AGAGATTTGCTATACAAAAG+GGG | 0.637378 | 5.3:-59478748 | MS.gene71346:CDS |
| GATTCGACTCAATTGCAGAA+GGG | 0.642604 | 5.3:-59478566 | MS.gene71346:CDS |
| GACCACCAGAAAGAGCTACA+AGG | 0.644551 | 5.3:+59478941 | None:intergenic |
| TCAATAAAGTGACCATAACA+AGG | 0.645816 | 5.3:+59480817 | None:intergenic |
| AAGTGACCATAACAAGGACA+AGG | 0.682002 | 5.3:+59480823 | None:intergenic |
| TAAAGTATGCAAAGGCCCTG+TGG | 0.699533 | 5.3:-59479333 | MS.gene71346:CDS |
| TATCAGCACAAGATACCACA+GGG | 0.727618 | 5.3:+59479318 | None:intergenic |
| TGATACCCCAAATTTCACTG+GGG | 0.801478 | 5.3:-59479429 | MS.gene71346:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTCAAAATTATTATTATTT+AGG | + | chr5.3:59479017-59479036 | None:intergenic | 10.0% |
| !! | ATTTAAAAATATGTCACAAA+AGG | + | chr5.3:59480164-59480183 | None:intergenic | 15.0% |
| !!! | AATCTTAATTATTTTATGCA+GGG | - | chr5.3:59479520-59479539 | MS.gene71346:intron | 15.0% |
| !!! | ACTTCATTTTAAAAATTGTA+TGG | + | chr5.3:59479419-59479438 | None:intergenic | 15.0% |
| !!! | ATATCAATGATTGAAATTTT+AGG | - | chr5.3:59479933-59479952 | MS.gene71346:intron | 15.0% |
| !!! | TACAATTTTTAAAATGAAGT+TGG | - | chr5.3:59479419-59479438 | MS.gene71346:CDS | 15.0% |
| !!! | TATCAATGATTGAAATTTTA+GGG | - | chr5.3:59479934-59479953 | MS.gene71346:intron | 15.0% |
| !!! | TTTTGTATTTGAATTGATTT+TGG | - | chr5.3:59479117-59479136 | MS.gene71346:intron | 15.0% |
| !! | AAGAAAATTATTGAAGCTAA+CGG | + | chr5.3:59479621-59479640 | None:intergenic | 20.0% |
| !! | ATTTCAAATTTCAAATCACA+AGG | - | chr5.3:59480431-59480450 | MS.gene71346:intron | 20.0% |
| !! | CAAACTTTATCATAAAAATG+AGG | + | chr5.3:59478642-59478661 | None:intergenic | 20.0% |
| !! | TATGTAACACATTAACTTTA+TGG | - | chr5.3:59478865-59478884 | MS.gene71346:CDS | 20.0% |
| !!! | ACTATAACGCTTTAAAATAA+AGG | + | chr5.3:59480240-59480259 | None:intergenic | 20.0% |
| !!! | ATGTTTGAAATTGTCAATTT+AGG | + | chr5.3:59479451-59479470 | None:intergenic | 20.0% |
| !!! | ATTTTTCTACAATGTGTTAT+TGG | - | chr5.3:59480328-59480347 | MS.gene71346:intron | 20.0% |
| !!! | GAATCTTAATTATTTTATGC+AGG | - | chr5.3:59479519-59479538 | MS.gene71346:intron | 20.0% |
| !!! | TGACATATTTTTAAATGCAT+TGG | - | chr5.3:59480168-59480187 | MS.gene71346:intron | 20.0% |
| !!! | TTTAAAGCGTTATAGTTTTA+GGG | - | chr5.3:59480244-59480263 | MS.gene71346:intron | 20.0% |
| !!! | TTTTAAAGCGTTATAGTTTT+AGG | - | chr5.3:59480243-59480262 | MS.gene71346:intron | 20.0% |
| !!! | TTTTTCTACAATGTGTTATT+GGG | - | chr5.3:59480329-59480348 | MS.gene71346:intron | 20.0% |
| ! | AACACATTGTAGAAAAATTG+TGG | + | chr5.3:59480326-59480345 | None:intergenic | 25.0% |
| ! | AACTGTTAAAAGTGACAAAA+TGG | + | chr5.3:59480296-59480315 | None:intergenic | 25.0% |
| ! | ATGTTGTCTTACCTAATTAT+TGG | - | chr5.3:59479595-59479614 | MS.gene71346:intron | 25.0% |
| ! | CTAAAATTATGTTTAGTCAG+AGG | + | chr5.3:59479080-59479099 | None:intergenic | 25.0% |
| ! | TCTGATCAACAATTGTTTAA+GGG | - | chr5.3:59480695-59480714 | MS.gene71346:CDS | 25.0% |
| ! | TTCTGATCAACAATTGTTTA+AGG | - | chr5.3:59480694-59480713 | MS.gene71346:CDS | 25.0% |
| !! | ACTTAGACACAATCAATTTT+TGG | + | chr5.3:59479766-59479785 | None:intergenic | 25.0% |
| !! | CTTAATTGTGTTTTGTGATT+TGG | - | chr5.3:59479726-59479745 | MS.gene71346:intron | 25.0% |
| !! | TATGTATTTTCAACTCTTGT+AGG | + | chr5.3:59480638-59480657 | None:intergenic | 25.0% |
| !!! | ATAGAGATTTGCTATACAAA+AGG | - | chr5.3:59480660-59480679 | MS.gene71346:intron | 25.0% |
| !!! | ATTTTGTCACTTTTAACAGT+TGG | - | chr5.3:59480295-59480314 | MS.gene71346:intron | 25.0% |
| !!! | TAGAGATTTGCTATACAAAA+GGG | - | chr5.3:59480661-59480680 | MS.gene71346:intron | 25.0% |
| !!! | TTTTGTCACTTTTAACAGTT+GGG | - | chr5.3:59480296-59480315 | MS.gene71346:intron | 25.0% |
| AAATCTCTAGCAAAAGCTAA+AGG | + | chr5.3:59480767-59480786 | None:intergenic | 30.0% | |
| AAGACTTCTTTGATCAAGAT+GGG | - | chr5.3:59480788-59480807 | MS.gene71346:CDS | 30.0% | |
| AATATTCCTTGTCCTTGTTA+TGG | - | chr5.3:59478581-59478600 | MS.gene71346:CDS | 30.0% | |
| AATCTCTAGCAAAAGCTAAA+GGG | + | chr5.3:59480766-59480785 | None:intergenic | 30.0% | |
| ACAATTGTTGATCAGAATGA+AGG | + | chr5.3:59480691-59480710 | None:intergenic | 30.0% | |
| ACTAAAACCATCTTCAATGT+TGG | - | chr5.3:59479282-59479301 | MS.gene71346:intron | 30.0% | |
| ATAATGTTGAGAGATGTTGT+AGG | + | chr5.3:59478834-59478853 | None:intergenic | 30.0% | |
| CATAAAACCAACATTGAAGA+TGG | + | chr5.3:59479292-59479311 | None:intergenic | 30.0% | |
| CCAAATATCAATTCAATCAG+AGG | - | chr5.3:59480018-59480037 | MS.gene71346:intron | 30.0% | |
| CCTCTGATTGAATTGATATT+TGG | + | chr5.3:59480021-59480040 | None:intergenic | 30.0% | |
| TAAGACTTCTTTGATCAAGA+TGG | - | chr5.3:59480787-59480806 | MS.gene71346:CDS | 30.0% | |
| TCAATAAAGTGACCATAACA+AGG | + | chr5.3:59478596-59478615 | None:intergenic | 30.0% | |
| TTAAAGATGCTGCAAAAGTA+GGG | + | chr5.3:59480559-59480578 | None:intergenic | 30.0% | |
| TTAAGTCAATAAAACCGCAA+TGG | + | chr5.3:59478950-59478969 | None:intergenic | 30.0% | |
| ! | GATTTTTCATATCAATGTGC+TGG | - | chr5.3:59479490-59479509 | MS.gene71346:intron | 30.0% |
| ! | TAAATGCATTGGTGTCTTAT+TGG | - | chr5.3:59480179-59480198 | MS.gene71346:intron | 30.0% |
| ! | TAAATTTTGCTCCACTAGAA+GGG | - | chr5.3:59479340-59479359 | MS.gene71346:CDS | 30.0% |
| ! | TTAAATTTTGCTCCACTAGA+AGG | - | chr5.3:59479339-59479358 | MS.gene71346:CDS | 30.0% |
| !! | AGAGATTTGCTATACAAAAG+GGG | - | chr5.3:59480662-59480681 | MS.gene71346:CDS | 30.0% |
| !! | ATTTTGTGTTTGAGATGTGT+CGG | + | chr5.3:59480214-59480233 | None:intergenic | 30.0% |
| !!! | TTGAAATTTTAGGGTTGTGA+TGG | - | chr5.3:59479943-59479962 | MS.gene71346:intron | 30.0% |
| AAATTGTATGGATGACCCTT+AGG | + | chr5.3:59479407-59479426 | None:intergenic | 35.0% | |
| AATTGTATGGATGACCCTTA+GGG | + | chr5.3:59479406-59479425 | None:intergenic | 35.0% | |
| AGACTTCTTTGATCAAGATG+GGG | - | chr5.3:59480789-59480808 | MS.gene71346:CDS | 35.0% | |
| AGAGGATAATAATCACCTCT+AGG | + | chr5.3:59479062-59479081 | None:intergenic | 35.0% | |
| AGGTAGTGAAAGTGACAAAT+TGG | - | chr5.3:59480721-59480740 | MS.gene71346:CDS | 35.0% | |
| ATGATACCCCAAATTTCACT+GGG | - | chr5.3:59479980-59479999 | MS.gene71346:intron | 35.0% | |
| ATTCTTAGGGAAAAACGCAT+TGG | - | chr5.3:59478705-59478724 | MS.gene71346:CDS | 35.0% | |
| CAACAATTGTTTAAGGGACT+AGG | - | chr5.3:59480701-59480720 | MS.gene71346:CDS | 35.0% | |
| CTTAAAGATGCTGCAAAAGT+AGG | + | chr5.3:59480560-59480579 | None:intergenic | 35.0% | |
| GACAATGCATAGTATATGCA+AGG | + | chr5.3:59479182-59479201 | None:intergenic | 35.0% | |
| GATTTCCATGCATGCATAAA+TGG | - | chr5.3:59479370-59479389 | MS.gene71346:CDS | 35.0% | |
| TACATGTTGTAGAAACCTAG+AGG | - | chr5.3:59479044-59479063 | MS.gene71346:CDS | 35.0% | |
| TAGTACCATTTATGCATGCA+TGG | + | chr5.3:59479378-59479397 | None:intergenic | 35.0% | |
| TAGTGAAAGTGACAAATTGG+TGG | - | chr5.3:59480724-59480743 | MS.gene71346:CDS | 35.0% | |
| TGTTCTCCATGCAATTCTTA+GGG | - | chr5.3:59478692-59478711 | MS.gene71346:CDS | 35.0% | |
| TTACATTGACGAAGCAATCA+TGG | + | chr5.3:59478755-59478774 | None:intergenic | 35.0% | |
| TTATGCATGCATGGAAATCA+TGG | + | chr5.3:59479369-59479388 | None:intergenic | 35.0% | |
| TTGTTCTCCATGCAATTCTT+AGG | - | chr5.3:59478691-59478710 | MS.gene71346:CDS | 35.0% | |
| ! | AGAACAACTGACTTTATGGT+TGG | + | chr5.3:59478678-59478697 | None:intergenic | 35.0% |
| ! | ATGGAGAACAACTGACTTTA+TGG | + | chr5.3:59478682-59478701 | None:intergenic | 35.0% |
| ! | CAAAAGGTGTACACTTACTA+TGG | + | chr5.3:59480148-59480167 | None:intergenic | 35.0% |
| ! | GTTTTTCCCTAAGAATTGCA+TGG | + | chr5.3:59478701-59478720 | None:intergenic | 35.0% |
| ! | TCGATATTTTTCGTCCATTG+CGG | - | chr5.3:59478893-59478912 | MS.gene71346:CDS | 35.0% |
| ! | TGTGATTTGGATTTGCAATG+TGG | - | chr5.3:59479739-59479758 | MS.gene71346:intron | 35.0% |
| ! | TTCAATCAGAGGATTTTCTG+TGG | - | chr5.3:59480029-59480048 | MS.gene71346:intron | 35.0% |
| ! | TTTTCTCCCCAGTGAAATTT+GGG | + | chr5.3:59479990-59480009 | None:intergenic | 35.0% |
| !! | CTACTTTTGCAGCATCTTTA+AGG | - | chr5.3:59480558-59480577 | MS.gene71346:intron | 35.0% |
| !! | GCAGTTGATAAAGTATGCAA+AGG | - | chr5.3:59480069-59480088 | MS.gene71346:intron | 35.0% |
| !! | TTATGGTTGGTAATGCTTGA+GGG | + | chr5.3:59478665-59478684 | None:intergenic | 35.0% |
| !! | TTTATGGTTGGTAATGCTTG+AGG | + | chr5.3:59478666-59478685 | None:intergenic | 35.0% |
| !! | TTTTGTGTTTGAGATGTGTC+GGG | + | chr5.3:59480213-59480232 | None:intergenic | 35.0% |
| !!! | TTCTAGTTTTTTTCGAACCC+CGG | - | chr5.3:59479155-59479174 | MS.gene71346:intron | 35.0% |
| AAAGACCTTGTAGCTCTTTC+TGG | - | chr5.3:59480464-59480483 | MS.gene71346:intron | 40.0% | |
| AAGACTTGTCCTAGAAATGG+TGG | - | chr5.3:59480581-59480600 | MS.gene71346:intron | 40.0% | |
| AAGTGACCATAACAAGGACA+AGG | + | chr5.3:59478590-59478609 | None:intergenic | 40.0% | |
| AATGGTACTAGAGTTCCCTA+AGG | - | chr5.3:59479388-59479407 | MS.gene71346:CDS | 40.0% | |
| AGATTCGACTCAATTGCAGA+AGG | - | chr5.3:59480843-59480862 | MS.gene71346:CDS | 40.0% | |
| AGCTGTGAGAAGTTGAATGT+TGG | + | chr5.3:59480410-59480429 | None:intergenic | 40.0% | |
| AGGAAGACTTGTCCTAGAAA+TGG | - | chr5.3:59480578-59480597 | MS.gene71346:intron | 40.0% | |
| ATATCAGCACAAGATACCAC+AGG | + | chr5.3:59480096-59480115 | None:intergenic | 40.0% | |
| ATGGTACTAGAGTTCCCTAA+GGG | - | chr5.3:59479389-59479408 | MS.gene71346:CDS | 40.0% | |
| CTTGTAGGAGTGAAATCAAG+TGG | + | chr5.3:59480623-59480642 | None:intergenic | 40.0% | |
| GAAGCTAACGGCCAATAATT+AGG | + | chr5.3:59479609-59479628 | None:intergenic | 40.0% | |
| GAGAAGTTGAATGTTGGAGA+TGG | + | chr5.3:59480404-59480423 | None:intergenic | 40.0% | |
| GATGATACCCCAAATTTCAC+TGG | - | chr5.3:59479979-59479998 | MS.gene71346:intron | 40.0% | |
| GATTCGACTCAATTGCAGAA+GGG | - | chr5.3:59480844-59480863 | MS.gene71346:CDS | 40.0% | |
| GTCCATAAAGTAAACCGCAA+TGG | + | chr5.3:59478910-59478929 | None:intergenic | 40.0% | |
| GTCCATTGCGGTTTACTTTA+TGG | - | chr5.3:59478905-59478924 | MS.gene71346:CDS | 40.0% | |
| TATCAGCACAAGATACCACA+GGG | + | chr5.3:59480095-59480114 | None:intergenic | 40.0% | |
| TGATACCCCAAATTTCACTG+GGG | - | chr5.3:59479981-59480000 | MS.gene71346:intron | 40.0% | |
| TGCATAGTATATGCAAGGTC+CGG | + | chr5.3:59479177-59479196 | None:intergenic | 40.0% | |
| TTGTTGTCTCCACCATTTCT+AGG | + | chr5.3:59480593-59480612 | None:intergenic | 40.0% | |
| TTTCTCCCCAGTGAAATTTG+GGG | + | chr5.3:59479989-59480008 | None:intergenic | 40.0% | |
| ! | CATATCAATGTGCTGGTGAA+TGG | - | chr5.3:59479497-59479516 | MS.gene71346:intron | 40.0% |
| ! | GTTTTCTCCCCAGTGAAATT+TGG | + | chr5.3:59479991-59480010 | None:intergenic | 40.0% |
| ! | TTTCTGGTGGTCACACTATA+GGG | - | chr5.3:59480480-59480499 | MS.gene71346:intron | 40.0% |
| !!! | TGTCACTTTTAACAGTTGGG+AGG | - | chr5.3:59480299-59480318 | MS.gene71346:intron | 40.0% |
| AAGCCTCTTACTGGGAAACA+AGG | - | chr5.3:59480818-59480837 | MS.gene71346:CDS | 45.0% | |
| AATCATGGCATCCCTTCTAG+TGG | + | chr5.3:59479354-59479373 | None:intergenic | 45.0% | |
| CATAGTATATGCAAGGTCCG+GGG | + | chr5.3:59479175-59479194 | None:intergenic | 45.0% | |
| GCATAGTATATGCAAGGTCC+GGG | + | chr5.3:59479176-59479195 | None:intergenic | 45.0% | |
| GGAACATCAAGCCTCTTACT+GGG | - | chr5.3:59480810-59480829 | MS.gene71346:CDS | 45.0% | |
| TAAAGTATGCAAAGGCCCTG+TGG | - | chr5.3:59480077-59480096 | MS.gene71346:intron | 45.0% | |
| TATTGATCCCTACCAACGCA+TGG | - | chr5.3:59478610-59478629 | MS.gene71346:CDS | 45.0% | |
| ! | CTTTCTGGTGGTCACACTAT+AGG | - | chr5.3:59480479-59480498 | MS.gene71346:intron | 45.0% |
| ! | GTCACACTATAGGGTTTGCT+AGG | - | chr5.3:59480489-59480508 | MS.gene71346:intron | 45.0% |
| ! | TGAGCTTAGCACAGTTGGTA+TGG | + | chr5.3:59479204-59479223 | None:intergenic | 45.0% |
| ATGAGGAGTAAGCCATGCGT+TGG | + | chr5.3:59478625-59478644 | None:intergenic | 50.0% | |
| GACCACCAGAAAGAGCTACA+AGG | + | chr5.3:59480472-59480491 | None:intergenic | 50.0% | |
| GACCTTGTAGCTCTTTCTGG+TGG | - | chr5.3:59480467-59480486 | MS.gene71346:intron | 50.0% | |
| GGGAACATCAAGCCTCTTAC+TGG | - | chr5.3:59480809-59480828 | MS.gene71346:CDS | 50.0% | |
| TACAGAATCACGAGCTGCTG+TGG | + | chr5.3:59480124-59480143 | None:intergenic | 50.0% | |
| ! | GAGTAAGCCATGCGTTGGTA+GGG | + | chr5.3:59478620-59478639 | None:intergenic | 50.0% |
| !! | TCGCCTTGTTTCCCAGTAAG+AGG | + | chr5.3:59480824-59480843 | None:intergenic | 50.0% |
| CCAACTGTGCTAAGCTCACG+AGG | - | chr5.3:59479206-59479225 | MS.gene71346:intron | 55.0% | |
| CCTCGTGAGCTTAGCACAGT+TGG | + | chr5.3:59479209-59479228 | None:intergenic | 55.0% | |
| ! | GGAGTAAGCCATGCGTTGGT+AGG | + | chr5.3:59478621-59478640 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 59478558 | 59480874 | 59478558 | ID=MS.gene71346 |
| chr5.3 | mRNA | 59478558 | 59480874 | 59478558 | ID=MS.gene71346.t1;Parent=MS.gene71346 |
| chr5.3 | exon | 59480662 | 59480874 | 59480662 | ID=MS.gene71346.t1.exon1;Parent=MS.gene71346.t1 |
| chr5.3 | CDS | 59480662 | 59480874 | 59480662 | ID=cds.MS.gene71346.t1;Parent=MS.gene71346.t1 |
| chr5.3 | exon | 59479283 | 59479477 | 59479283 | ID=MS.gene71346.t1.exon2;Parent=MS.gene71346.t1 |
| chr5.3 | CDS | 59479283 | 59479477 | 59479283 | ID=cds.MS.gene71346.t1;Parent=MS.gene71346.t1 |
| chr5.3 | exon | 59478558 | 59479118 | 59478558 | ID=MS.gene71346.t1.exon3;Parent=MS.gene71346.t1 |
| chr5.3 | CDS | 59478558 | 59479118 | 59478558 | ID=cds.MS.gene71346.t1;Parent=MS.gene71346.t1 |
| Gene Sequence |
| Protein sequence |
