Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71953.t1 | XP_003608704.1 | 89.8 | 322 | 26 | 5 | 1 | 322 | 1 | 315 | 1.80E-103 | 386 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71953.t1 | Q9M202 | 30.2 | 331 | 174 | 8 | 1 | 319 | 1 | 286 | 2.0e-31 | 137.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71953.t1 | G7JIV8 | 89.8 | 322 | 26 | 5 | 1 | 322 | 1 | 315 | 1.3e-103 | 386.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene71953.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene71953 | 0.815407 | 9.39E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene71953 | 0.852971 | 3.25E-61 | -1.69E-46 |
| MS.gene049404 | MS.gene71953 | 0.841545 | 4.45E-58 | -1.69E-46 |
| MS.gene049452 | MS.gene71953 | 0.801001 | 1.11E-48 | -1.69E-46 |
| MS.gene049501 | MS.gene71953 | 0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene71953 | 0.801343 | 9.42E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene71953 | 0.811713 | 6.10E-51 | -1.69E-46 |
| MS.gene050273 | MS.gene71953 | 0.809877 | 1.52E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene71953 | 0.819534 | 1.10E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene71953 | 0.824271 | 8.84E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene71953 | 0.818966 | 1.49E-52 | -1.69E-46 |
| MS.gene050657 | MS.gene71953 | 0.809335 | 1.99E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene71953 | 0.831752 | 1.40E-55 | -1.69E-46 |
| MS.gene050962 | MS.gene71953 | 0.823854 | 1.11E-53 | -1.69E-46 |
| MS.gene051198 | MS.gene71953 | 0.822432 | 2.38E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene71953 | 0.823399 | 1.41E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene71953 | 0.854038 | 1.61E-61 | -1.69E-46 |
| MS.gene051388 | MS.gene71953 | 0.804044 | 2.61E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene71953 | 0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene71953 | 0.86975 | 2.45E-66 | -1.69E-46 |
| MS.gene052037 | MS.gene71953 | 0.818809 | 1.61E-52 | -1.69E-46 |
| MS.gene052333 | MS.gene71953 | 0.806012 | 1.01E-49 | -1.69E-46 |
| MS.gene052488 | MS.gene71953 | 0.821604 | 3.70E-53 | -1.69E-46 |
| MS.gene052516 | MS.gene71953 | 0.803502 | 3.38E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene71953 | 0.807395 | 5.16E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene71953 | 0.832695 | 8.16E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene71953 | 0.846781 | 1.75E-59 | -1.69E-46 |
| MS.gene053079 | MS.gene71953 | 0.82331 | 1.48E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene71953 | 0.810247 | 1.27E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene71953 | 0.859804 | 3.21E-63 | -1.69E-46 |
| MS.gene053296 | MS.gene71953 | 0.818708 | 1.70E-52 | -1.69E-46 |
| MS.gene053621 | MS.gene71953 | 0.813745 | 2.19E-51 | -1.69E-46 |
| MS.gene053998 | MS.gene71953 | 0.807001 | 6.26E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene71953 | 0.802782 | 4.77E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene71953 | -0.805068 | 1.60E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene71953 | 0.817118 | 3.89E-52 | -1.69E-46 |
| MS.gene054576 | MS.gene71953 | 0.835194 | 1.93E-56 | -1.69E-46 |
| MS.gene054584 | MS.gene71953 | 0.812729 | 3.66E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene71953 | 0.868685 | 5.43E-66 | -1.69E-46 |
| MS.gene054775 | MS.gene71953 | 0.806611 | 7.56E-50 | -1.69E-46 |
| MS.gene054991 | MS.gene71953 | 0.805807 | 1.12E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene71953 | 0.820327 | 7.27E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene71953 | 0.802666 | 5.03E-49 | -1.69E-46 |
| MS.gene055586 | MS.gene71953 | 0.818269 | 2.14E-52 | -1.69E-46 |
| MS.gene055589 | MS.gene71953 | 0.816227 | 6.17E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene71953 | 0.841427 | 4.78E-58 | -1.69E-46 |
| MS.gene056173 | MS.gene71953 | 0.801646 | 8.16E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene71953 | 0.827042 | 1.95E-54 | -1.69E-46 |
| MS.gene056366 | MS.gene71953 | 0.816483 | 5.40E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene71953 | 0.807278 | 5.46E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene71953 | 0.809741 | 1.63E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene71953 | 0.826972 | 2.02E-54 | -1.69E-46 |
| MS.gene057314 | MS.gene71953 | 0.809553 | 1.79E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene71953 | 0.864946 | 8.43E-65 | -1.69E-46 |
| MS.gene058010 | MS.gene71953 | 0.829022 | 6.49E-55 | -1.69E-46 |
| MS.gene058294 | MS.gene71953 | 0.808438 | 3.10E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene71953 | 0.823193 | 1.58E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene71953 | 0.825621 | 4.24E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene71953 | 0.805144 | 1.54E-49 | -1.69E-46 |
| MS.gene059601 | MS.gene71953 | 0.85627 | 3.60E-62 | -1.69E-46 |
| MS.gene059625 | MS.gene71953 | 0.812408 | 4.30E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene71953 | 0.808266 | 3.37E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene71953 | 0.801498 | 8.75E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene71953 | 0.81021 | 1.29E-50 | -1.69E-46 |
| MS.gene060353 | MS.gene71953 | 0.804427 | 2.17E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene71953 | 0.813503 | 2.48E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71953.t1 | MTR_4g100860 | 92.547 | 322 | 17 | 5 | 1 | 322 | 1 | 315 | 0.0 | 575 |
| MS.gene71953.t1 | MTR_0160s0030 | 40.872 | 367 | 160 | 12 | 1 | 322 | 1 | 355 | 2.17e-66 | 213 |
| MS.gene71953.t1 | MTR_5g012630 | 42.901 | 324 | 103 | 14 | 1 | 307 | 1 | 259 | 4.95e-59 | 190 |
| MS.gene71953.t1 | MTR_4g027440 | 33.062 | 369 | 164 | 9 | 1 | 310 | 2 | 346 | 1.53e-41 | 148 |
| MS.gene71953.t1 | MTR_4g082980 | 50.000 | 62 | 27 | 1 | 251 | 312 | 393 | 450 | 3.29e-11 | 64.3 |
| MS.gene71953.t1 | MTR_1g106730 | 31.548 | 168 | 75 | 6 | 160 | 312 | 57 | 199 | 6.49e-11 | 62.0 |
| MS.gene71953.t1 | MTR_4g109340 | 50.000 | 64 | 26 | 2 | 252 | 315 | 436 | 493 | 6.98e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71953.t1 | AT3G60580 | 35.905 | 337 | 147 | 12 | 1 | 319 | 1 | 286 | 2.21e-47 | 161 |
| MS.gene71953.t1 | AT1G02030 | 35.821 | 335 | 127 | 11 | 2 | 319 | 3 | 266 | 2.74e-41 | 145 |
| MS.gene71953.t1 | AT2G45120 | 35.072 | 345 | 167 | 11 | 1 | 321 | 1 | 312 | 1.43e-40 | 144 |
| MS.gene71953.t1 | AT4G16610 | 40.462 | 173 | 80 | 5 | 3 | 173 | 4 | 155 | 1.76e-24 | 99.0 |
| MS.gene71953.t1 | AT1G26610 | 48.000 | 75 | 34 | 2 | 238 | 312 | 386 | 455 | 3.20e-12 | 67.4 |
| MS.gene71953.t1 | AT5G61470 | 43.902 | 82 | 36 | 3 | 205 | 276 | 218 | 299 | 3.30e-11 | 63.5 |
Find 48 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTGTTGTAGAAAATTC+TGG | 0.230051 | 8.3:+20239742 | None:intergenic |
| CCAAACACCTTAAAACAAAA+TGG | 0.311153 | 8.3:+20239351 | None:intergenic |
| TCACGTACAAAAGAAAATTC+AGG | 0.344635 | 8.3:+20239879 | None:intergenic |
| TCTTTAAATCTAGCAGCAAT+AGG | 0.373006 | 8.3:+20239237 | None:intergenic |
| CACATAGCAACATCTTCTTC+AGG | 0.374474 | 8.3:+20239636 | None:intergenic |
| GGCACCATGAAACTCGGCTT+TGG | 0.378686 | 8.3:+20239717 | None:intergenic |
| GAAACCAAAGCCGAGTTTCA+TGG | 0.392923 | 8.3:-20239721 | MS.gene71953:CDS |
| AAGCTTTGTTCAAGGACGTT+TGG | 0.415966 | 8.3:-20240092 | MS.gene71953:CDS |
| TCCGATGATGAGAAAGAATC+AGG | 0.418255 | 8.3:+20239993 | None:intergenic |
| TAGATCGTTGTTGACGAGTC+GGG | 0.431866 | 8.3:+20239802 | None:intergenic |
| TGATGCTTTCGCGAGACAAA+TGG | 0.443203 | 8.3:-20239608 | MS.gene71953:CDS |
| ACCTGATTCTTTCTCATCAT+CGG | 0.450240 | 8.3:-20239994 | MS.gene71953:CDS |
| GTGAATTGTGATGGAGTTGT+TGG | 0.452696 | 8.3:+20239696 | None:intergenic |
| GTTTCGATCTTCAAGAGCAT+TGG | 0.459910 | 8.3:-20239454 | MS.gene71953:CDS |
| TTTCGATCTTCAAGAGCATT+GGG | 0.469548 | 8.3:-20239453 | MS.gene71953:CDS |
| TTTGGTTCTGGTCAAGCACT+TGG | 0.469573 | 8.3:-20239333 | MS.gene71953:CDS |
| TTGTTGTCGTCGTTGTTGTT+TGG | 0.479895 | 8.3:+20239765 | None:intergenic |
| CTCGTCAACAACGATCTAAA+CGG | 0.483916 | 8.3:-20239797 | MS.gene71953:CDS |
| GGTTCTGGTCAAGCACTTGG+TGG | 0.484093 | 8.3:-20239330 | MS.gene71953:CDS |
| TGAAGAAGAAGAGGGATCGG+TGG | 0.488736 | 8.3:-20239547 | MS.gene71953:CDS |
| TCATCTTCTTCAAGTGGAGC+TGG | 0.500458 | 8.3:+20239192 | None:intergenic |
| ACAAATGCAAGCTTTGTTCA+AGG | 0.502681 | 8.3:-20240100 | MS.gene71953:CDS |
| GCGAAGAATGGTAATGGTAA+TGG | 0.505680 | 8.3:-20239399 | MS.gene71953:CDS |
| ACATAGCAACATCTTCTTCA+GGG | 0.525812 | 8.3:+20239637 | None:intergenic |
| AAGTTATTGAAACGAGTTCG+TGG | 0.531632 | 8.3:-20239507 | MS.gene71953:CDS |
| GCAGTGGAAGTTGATGAAGA+AGG | 0.533864 | 8.3:+20239282 | None:intergenic |
| TGTCGCGATGAAGCGAAGAA+TGG | 0.548591 | 8.3:-20239411 | MS.gene71953:CDS |
| TCTTGTTCAGTGAATTGTGA+TGG | 0.549593 | 8.3:+20239687 | None:intergenic |
| CAGTGGAAGTTGATGAAGAA+GGG | 0.550853 | 8.3:+20239283 | None:intergenic |
| TTTGGCAATGGAAGAGCACT+TGG | 0.550999 | 8.3:-20240074 | MS.gene71953:CDS |
| GTTGTTGGCACCATGAAACT+CGG | 0.554243 | 8.3:+20239711 | None:intergenic |
| TTAGATCGTTGTTGACGAGT+CGG | 0.558622 | 8.3:+20239801 | None:intergenic |
| GGAACAAGATGAAGAAGAAG+AGG | 0.558902 | 8.3:-20239556 | MS.gene71953:CDS |
| AGATCATCATCTTCTTCAAG+TGG | 0.559232 | 8.3:+20239186 | None:intergenic |
| GGCAATGGAAGAGCACTTGG+TGG | 0.563472 | 8.3:-20240071 | MS.gene71953:CDS |
| TGTTCAAGGACGTTTGGCAA+TGG | 0.572618 | 8.3:-20240086 | MS.gene71953:CDS |
| GATGAAGCGAAGAATGGTAA+TGG | 0.574456 | 8.3:-20239405 | MS.gene71953:CDS |
| AGCACTTGGTGGACACATGA+AGG | 0.581864 | 8.3:-20240060 | MS.gene71953:CDS |
| ATTAACATTAACATTAGCAG+TGG | 0.584695 | 8.3:+20239266 | None:intergenic |
| AGATGAAGAAGAAGAGGGAT+CGG | 0.594748 | 8.3:-20239550 | MS.gene71953:CDS |
| AGTTATTGAAACGAGTTCGT+GGG | 0.596995 | 8.3:-20239506 | MS.gene71953:CDS |
| GTATCAGAAACTGAACTCAC+AGG | 0.612015 | 8.3:+20239663 | None:intergenic |
| CATAGCAACATCTTCTTCAG+GGG | 0.618873 | 8.3:+20239638 | None:intergenic |
| GAACAAGATGAAGAAGAAGA+GGG | 0.633530 | 8.3:-20239555 | MS.gene71953:CDS |
| AGCATTTGTGTGAAAACTGT+GGG | 0.639279 | 8.3:-20239482 | MS.gene71953:CDS |
| ATCGGTGGAGAAAATATCGA+AGG | 0.639870 | 8.3:-20239532 | MS.gene71953:CDS |
| GATGAACAACATCAACAATG+TGG | 0.658258 | 8.3:-20239577 | MS.gene71953:CDS |
| AAGCATTTGTGTGAAAACTG+TGG | 0.714401 | 8.3:-20239483 | MS.gene71953:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATTAACATTAACATTAGCAG+TGG | + | chr8.3:20240011-20240030 | None:intergenic | 25.0% |
| !!! | TGAATGTCCATTTTGTTTTA+AGG | - | chr8.3:20239916-20239935 | MS.gene71953:CDS | 25.0% |
| CCAAACACCTTAAAACAAAA+TGG | + | chr8.3:20239926-20239945 | None:intergenic | 30.0% | |
| TCACGTACAAAAGAAAATTC+AGG | + | chr8.3:20239398-20239417 | None:intergenic | 30.0% | |
| TCTTCTGTTGTAGAAAATTC+TGG | + | chr8.3:20239535-20239554 | None:intergenic | 30.0% | |
| TCTTTAAATCTAGCAGCAAT+AGG | + | chr8.3:20240040-20240059 | None:intergenic | 30.0% | |
| !!! | CCATTTTGTTTTAAGGTGTT+TGG | - | chr8.3:20239923-20239942 | MS.gene71953:CDS | 30.0% |
| AAGCATTTGTGTGAAAACTG+TGG | - | chr8.3:20239791-20239810 | MS.gene71953:CDS | 35.0% | |
| AAGTTATTGAAACGAGTTCG+TGG | - | chr8.3:20239767-20239786 | MS.gene71953:CDS | 35.0% | |
| ACATAGCAACATCTTCTTCA+GGG | + | chr8.3:20239640-20239659 | None:intergenic | 35.0% | |
| ACCTGATTCTTTCTCATCAT+CGG | - | chr8.3:20239280-20239299 | MS.gene71953:CDS | 35.0% | |
| AGATCATCATCTTCTTCAAG+TGG | + | chr8.3:20240091-20240110 | None:intergenic | 35.0% | |
| AGCATTTGTGTGAAAACTGT+GGG | - | chr8.3:20239792-20239811 | MS.gene71953:CDS | 35.0% | |
| AGTTATTGAAACGAGTTCGT+GGG | - | chr8.3:20239768-20239787 | MS.gene71953:CDS | 35.0% | |
| GAACAAGATGAAGAAGAAGA+GGG | - | chr8.3:20239719-20239738 | MS.gene71953:CDS | 35.0% | |
| GATGAACAACATCAACAATG+TGG | - | chr8.3:20239697-20239716 | MS.gene71953:CDS | 35.0% | |
| TCTTGTTCAGTGAATTGTGA+TGG | + | chr8.3:20239590-20239609 | None:intergenic | 35.0% | |
| !! | ACAAATGCAAGCTTTGTTCA+AGG | - | chr8.3:20239174-20239193 | MS.gene71953:CDS | 35.0% |
| !! | TTTCGATCTTCAAGAGCATT+GGG | - | chr8.3:20239821-20239840 | MS.gene71953:CDS | 35.0% |
| !!! | GCAACTTTGAGACTTTTCTT+GGG | + | chr8.3:20239371-20239390 | None:intergenic | 35.0% |
| !!! | TGCAACTTTGAGACTTTTCT+TGG | + | chr8.3:20239372-20239391 | None:intergenic | 35.0% |
| !!! | TGTTTTAAGGTGTTTGGTTC+TGG | - | chr8.3:20239929-20239948 | MS.gene71953:CDS | 35.0% |
| AGATGAAGAAGAAGAGGGAT+CGG | - | chr8.3:20239724-20239743 | MS.gene71953:CDS | 40.0% | |
| ATCGGTGGAGAAAATATCGA+AGG | - | chr8.3:20239742-20239761 | MS.gene71953:CDS | 40.0% | |
| CACATAGCAACATCTTCTTC+AGG | + | chr8.3:20239641-20239660 | None:intergenic | 40.0% | |
| CATAGCAACATCTTCTTCAG+GGG | + | chr8.3:20239639-20239658 | None:intergenic | 40.0% | |
| CTCGTCAACAACGATCTAAA+CGG | - | chr8.3:20239477-20239496 | MS.gene71953:CDS | 40.0% | |
| GATGAAGCGAAGAATGGTAA+TGG | - | chr8.3:20239869-20239888 | MS.gene71953:CDS | 40.0% | |
| GGAACAAGATGAAGAAGAAG+AGG | - | chr8.3:20239718-20239737 | MS.gene71953:CDS | 40.0% | |
| GTATCAGAAACTGAACTCAC+AGG | + | chr8.3:20239614-20239633 | None:intergenic | 40.0% | |
| TCCGATGATGAGAAAGAATC+AGG | + | chr8.3:20239284-20239303 | None:intergenic | 40.0% | |
| TTAGATCGTTGTTGACGAGT+CGG | + | chr8.3:20239476-20239495 | None:intergenic | 40.0% | |
| ! | GTGAATTGTGATGGAGTTGT+TGG | + | chr8.3:20239581-20239600 | None:intergenic | 40.0% |
| ! | GTTTCGATCTTCAAGAGCAT+TGG | - | chr8.3:20239820-20239839 | MS.gene71953:CDS | 40.0% |
| ! | TTGTTGTCGTCGTTGTTGTT+TGG | + | chr8.3:20239512-20239531 | None:intergenic | 40.0% |
| !! | AAGCTTTGTTCAAGGACGTT+TGG | - | chr8.3:20239182-20239201 | MS.gene71953:CDS | 40.0% |
| !! | CAGTGGAAGTTGATGAAGAA+GGG | + | chr8.3:20239994-20240013 | None:intergenic | 40.0% |
| !! | GCGAAGAATGGTAATGGTAA+TGG | - | chr8.3:20239875-20239894 | MS.gene71953:CDS | 40.0% |
| GAAACCAAAGCCGAGTTTCA+TGG | - | chr8.3:20239553-20239572 | MS.gene71953:CDS | 45.0% | |
| GTTGTTGGCACCATGAAACT+CGG | + | chr8.3:20239566-20239585 | None:intergenic | 45.0% | |
| TAGATCGTTGTTGACGAGTC+GGG | + | chr8.3:20239475-20239494 | None:intergenic | 45.0% | |
| TCATCTTCTTCAAGTGGAGC+TGG | + | chr8.3:20240085-20240104 | None:intergenic | 45.0% | |
| TGATGCTTTCGCGAGACAAA+TGG | - | chr8.3:20239666-20239685 | MS.gene71953:CDS | 45.0% | |
| TGTTCAAGGACGTTTGGCAA+TGG | - | chr8.3:20239188-20239207 | MS.gene71953:CDS | 45.0% | |
| !! | GCAGTGGAAGTTGATGAAGA+AGG | + | chr8.3:20239995-20240014 | None:intergenic | 45.0% |
| !! | TTTGGCAATGGAAGAGCACT+TGG | - | chr8.3:20239200-20239219 | MS.gene71953:CDS | 45.0% |
| !! | TTTGGTTCTGGTCAAGCACT+TGG | - | chr8.3:20239941-20239960 | MS.gene71953:CDS | 45.0% |
| TGAAGAAGAAGAGGGATCGG+TGG | - | chr8.3:20239727-20239746 | MS.gene71953:CDS | 50.0% | |
| TGTCGCGATGAAGCGAAGAA+TGG | - | chr8.3:20239863-20239882 | MS.gene71953:CDS | 50.0% | |
| ! | AGCACTTGGTGGACACATGA+AGG | - | chr8.3:20239214-20239233 | MS.gene71953:CDS | 50.0% |
| GGCACCATGAAACTCGGCTT+TGG | + | chr8.3:20239560-20239579 | None:intergenic | 55.0% | |
| ! | GGTTCTGGTCAAGCACTTGG+TGG | - | chr8.3:20239944-20239963 | MS.gene71953:CDS | 55.0% |
| !! | GGCAATGGAAGAGCACTTGG+TGG | - | chr8.3:20239203-20239222 | MS.gene71953:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 20239164 | 20240132 | 20239164 | ID=MS.gene71953 |
| chr8.3 | mRNA | 20239164 | 20240132 | 20239164 | ID=MS.gene71953.t1;Parent=MS.gene71953 |
| chr8.3 | exon | 20239164 | 20240132 | 20239164 | ID=MS.gene71953.t1.exon1;Parent=MS.gene71953.t1 |
| chr8.3 | CDS | 20239164 | 20240132 | 20239164 | ID=cds.MS.gene71953.t1;Parent=MS.gene71953.t1 |
| Gene Sequence |
| Protein sequence |
