Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72940.t1 | XP_003594437.1 | 97.8 | 459 | 10 | 0 | 1 | 459 | 1 | 459 | 8.80E-266 | 925.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72940.t1 | G7IFT7 | 97.8 | 459 | 10 | 0 | 1 | 459 | 1 | 459 | 6.3e-266 | 925.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene72940 | -0.8111 | 8.29E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene72940 | -0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene050647 | MS.gene72940 | 0.801694 | 7.98E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene72940 | -0.816011 | 6.89E-52 | -1.69E-46 |
| MS.gene05081 | MS.gene72940 | -0.80462 | 1.98E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene72940 | -0.801363 | 9.33E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene72940 | -0.807115 | 5.92E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene72940 | -0.823608 | 1.26E-53 | -1.69E-46 |
| MS.gene051996 | MS.gene72940 | 0.831324 | 1.78E-55 | -1.69E-46 |
| MS.gene052015 | MS.gene72940 | 0.808059 | 3.73E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene72940 | -0.823337 | 1.46E-53 | -1.69E-46 |
| MS.gene05240 | MS.gene72940 | 0.807875 | 4.08E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene72940 | -0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene72940 | -0.828465 | 8.86E-55 | -1.69E-46 |
| MS.gene052505 | MS.gene72940 | -0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene72940 | -0.833094 | 6.50E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene72940 | -0.832441 | 9.44E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene72940 | -0.824636 | 7.25E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene72940 | -0.810338 | 1.21E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene72940 | -0.803912 | 2.78E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene72940 | 0.814791 | 1.29E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene72940 | -0.818488 | 1.91E-52 | -1.69E-46 |
| MS.gene054742 | MS.gene72940 | 0.843583 | 1.28E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene72940 | -0.809112 | 2.22E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene72940 | -0.812532 | 4.04E-51 | -1.69E-46 |
| MS.gene056040 | MS.gene72940 | -0.830674 | 2.57E-55 | -1.69E-46 |
| MS.gene056076 | MS.gene72940 | 0.828583 | 8.29E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene72940 | -0.804666 | 1.94E-49 | -1.69E-46 |
| MS.gene056330 | MS.gene72940 | 0.808852 | 2.53E-50 | -1.69E-46 |
| MS.gene056680 | MS.gene72940 | 0.832779 | 7.78E-56 | -1.69E-46 |
| MS.gene056877 | MS.gene72940 | -0.805888 | 1.07E-49 | -1.69E-46 |
| MS.gene056920 | MS.gene72940 | 0.81931 | 1.24E-52 | -1.69E-46 |
| MS.gene057048 | MS.gene72940 | -0.805035 | 1.62E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene72940 | -0.827492 | 1.52E-54 | -1.69E-46 |
| MS.gene058157 | MS.gene72940 | -0.805114 | 1.56E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene72940 | -0.817358 | 3.44E-52 | -1.69E-46 |
| MS.gene058418 | MS.gene72940 | 0.80658 | 7.68E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene72940 | -0.823404 | 1.41E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene72940 | -0.820601 | 6.29E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene72940 | -0.801715 | 7.90E-49 | -1.69E-46 |
| MS.gene059103 | MS.gene72940 | 0.800049 | 1.73E-48 | -1.69E-46 |
| MS.gene05914 | MS.gene72940 | -0.800005 | 1.77E-48 | -1.69E-46 |
| MS.gene059303 | MS.gene72940 | -0.814791 | 1.29E-51 | -1.69E-46 |
| MS.gene059328 | MS.gene72940 | 0.81385 | 2.08E-51 | -1.69E-46 |
| MS.gene059480 | MS.gene72940 | 0.801195 | 1.01E-48 | -1.69E-46 |
| MS.gene059891 | MS.gene72940 | 0.81227 | 4.61E-51 | -1.69E-46 |
| MS.gene059892 | MS.gene72940 | 0.809999 | 1.43E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene72940 | -0.807168 | 5.77E-50 | -1.69E-46 |
| MS.gene060087 | MS.gene72940 | 0.840298 | 9.46E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene72940 | -0.800545 | 1.37E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72940.t1 | MTR_2g028610 | 97.821 | 459 | 10 | 0 | 1 | 459 | 1 | 459 | 0.0 | 939 |
| MS.gene72940.t1 | MTR_2g028590 | 84.698 | 464 | 66 | 1 | 1 | 459 | 1 | 464 | 0.0 | 806 |
| MS.gene72940.t1 | MTR_5g077710 | 50.000 | 372 | 177 | 3 | 96 | 458 | 13 | 384 | 8.44e-137 | 399 |
| MS.gene72940.t1 | MTR_1g024005 | 37.850 | 428 | 230 | 9 | 34 | 458 | 30 | 424 | 4.11e-88 | 275 |
| MS.gene72940.t1 | MTR_0010s0400 | 39.433 | 388 | 212 | 9 | 71 | 457 | 91 | 456 | 4.99e-88 | 276 |
| MS.gene72940.t1 | MTR_8g028460 | 43.125 | 320 | 168 | 6 | 146 | 457 | 172 | 485 | 3.38e-86 | 273 |
| MS.gene72940.t1 | MTR_3g113270 | 36.659 | 431 | 226 | 12 | 34 | 458 | 30 | 419 | 4.44e-85 | 267 |
| MS.gene72940.t1 | MTR_4g094572 | 41.156 | 294 | 160 | 6 | 169 | 458 | 91 | 375 | 2.30e-68 | 223 |
| MS.gene72940.t1 | MTR_3g071050 | 35.974 | 303 | 151 | 10 | 34 | 332 | 2 | 265 | 8.97e-46 | 160 |
| MS.gene72940.t1 | MTR_3g070620 | 43.939 | 132 | 70 | 3 | 269 | 397 | 59 | 189 | 8.37e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72940.t1 | AT3G05390 | 35.938 | 448 | 250 | 11 | 35 | 457 | 24 | 459 | 1.18e-91 | 286 |
| MS.gene72940.t1 | AT3G27230 | 36.735 | 441 | 227 | 12 | 21 | 458 | 17 | 408 | 2.94e-85 | 268 |
| MS.gene72940.t1 | AT5G40830 | 36.235 | 425 | 221 | 10 | 37 | 457 | 33 | 411 | 6.50e-85 | 267 |
| MS.gene72940.t1 | AT5G40830 | 36.235 | 425 | 221 | 10 | 37 | 457 | 33 | 411 | 6.50e-85 | 267 |
| MS.gene72940.t1 | AT4G01240 | 41.250 | 320 | 173 | 7 | 146 | 457 | 342 | 654 | 4.89e-81 | 264 |
| MS.gene72940.t1 | AT5G40830 | 32.311 | 424 | 199 | 8 | 37 | 457 | 33 | 371 | 1.44e-71 | 231 |
| MS.gene72940.t1 | AT1G29790 | 38.567 | 293 | 157 | 6 | 169 | 458 | 104 | 376 | 1.38e-70 | 228 |
| MS.gene72940.t1 | AT1G29790 | 38.567 | 293 | 157 | 6 | 169 | 458 | 104 | 376 | 1.38e-70 | 228 |
Find 0 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATTAAGTGGATATTTGATGA+TGG | + | 15006:12569-12588 | MS.gene72940:CDS | 25.0% |
| ! | TGTGTTGTATGATATATACA+GGG | + | 15006:12892-12911 | MS.gene72940:CDS | 25.0% |
| ! | TTGTGTTGTATGATATATAC+AGG | + | 15006:12891-12910 | MS.gene72940:CDS | 25.0% |
| !! | TTCCAAGCTTTATGATTAAA+GGG | - | 15006:12097-12116 | MS.gene72940:intergenic | 25.0% |
| !! | TTTCCAAGCTTTATGATTAA+AGG | - | 15006:12098-12117 | MS.gene72940:intergenic | 25.0% |
| AACCCTTTAATCATAAAGCT+TGG | + | 15006:12092-12111 | MS.gene72940:CDS | 30.0% | |
| AGAAAGAAGAGAAGATTAAG+TGG | + | 15006:12555-12574 | MS.gene72940:CDS | 30.0% | |
| ATACATGAAACTAAATGGAC+CGG | - | 15006:11877-11896 | MS.gene72940:intergenic | 30.0% | |
| TACCGATACATGAAACTAAA+TGG | - | 15006:11882-11901 | MS.gene72940:intergenic | 30.0% | |
| TGAACATGTAAATGGTGAAA+AGG | - | 15006:11854-11873 | MS.gene72940:intergenic | 30.0% | |
| TGAGAAATGCTAATATGCAT+TGG | - | 15006:12785-12804 | MS.gene72940:intergenic | 30.0% | |
| TGCATATTAGCATTTCTCAA+AGG | + | 15006:12786-12805 | MS.gene72940:CDS | 30.0% | |
| ! | ATGATATATACAGGGTTTTG+AGG | + | 15006:12900-12919 | MS.gene72940:CDS | 30.0% |
| ! | GTCCATTTAGTTTCATGTAT+CGG | + | 15006:11877-11896 | MS.gene72940:CDS | 30.0% |
| ! | GTCTGTGGATTATTATAAGA+TGG | - | 15006:11774-11793 | MS.gene72940:intergenic | 30.0% |
| ! | TGGTAACTTTTACAACCATA+GGG | - | 15006:12470-12489 | MS.gene72940:intergenic | 30.0% |
| AAAGCTCAGATAAGATTGTG+TGG | - | 15006:11980-11999 | MS.gene72939:intergenic | 35.0% | |
| ACATAATTCATCGGAGACTT+TGG | - | 15006:12383-12402 | MS.gene72940:intergenic | 35.0% | |
| ACCAGATACAAGCATTATCT+GGG | + | 15006:12442-12461 | MS.gene72940:CDS | 35.0% | |
| ATACAACACAAACTCAAGCA+TGG | - | 15006:12882-12901 | MS.gene72940:intergenic | 35.0% | |
| CAATATATGACGTACGACAT+TGG | + | 15006:12275-12294 | MS.gene72940:CDS | 35.0% | |
| CATGTAAATGGTGAAAAGGT+TGG | - | 15006:11850-11869 | MS.gene72940:intergenic | 35.0% | |
| TCTTTCTATCAACAAGACAC+TGG | - | 15006:12490-12509 | MS.gene72940:intergenic | 35.0% | |
| TGGAATGAAACTTGATCCTA+AGG | + | 15006:13033-13052 | MS.gene72940:CDS | 35.0% | |
| TGTTACAAGCACACTGAATT+TGG | + | 15006:12718-12737 | MS.gene72940:CDS | 35.0% | |
| TTCACCATTTACATGTTCAC+CGG | + | 15006:11855-11874 | MS.gene72940:CDS | 35.0% | |
| ! | AACATTTGCTGCAAGAATGA+GGG | + | 15006:12679-12698 | MS.gene72940:CDS | 35.0% |
| ! | CTGGTAACTTTTACAACCAT+AGG | - | 15006:12471-12490 | MS.gene72940:intergenic | 35.0% |
| !! | AAGTGGATATTTGATGATGG+TGG | + | 15006:12572-12591 | MS.gene72940:CDS | 35.0% |
| !! | GTTGGCTCTACATAATTCAT+CGG | - | 15006:12392-12411 | MS.gene72940:intergenic | 35.0% |
| AAAGCAACCTTTGCAGTCAT+AGG | - | 15006:12528-12547 | MS.gene72939:intergenic | 40.0% | |
| AACAACATGGTTGCATCAAG+GGG | + | 15006:12752-12771 | MS.gene72940:CDS | 40.0% | |
| AATAAACTGCGATGGCATGT+TGG | + | 15006:13013-13032 | MS.gene72940:CDS | 40.0% | |
| AATTCATCGGAGACTTTGGA+TGG | - | 15006:12379-12398 | MS.gene72940:intergenic | 40.0% | |
| ACAAACTCAAGCATGGTATC+TGG | - | 15006:12875-12894 | MS.gene72940:intergenic | 40.0% | |
| ACAAGCACACTGAATTTGGA+TGG | + | 15006:12722-12741 | MS.gene72940:CDS | 40.0% | |
| ACTTGATCCTAAGGTTCGAA+AGG | + | 15006:13042-13061 | MS.gene72940:CDS | 40.0% | |
| ATATGACGTACGACATTGGA+GGG | + | 15006:12279-12298 | MS.gene72940:CDS | 40.0% | |
| CAACAACATGGTTGCATCAA+GGG | + | 15006:12751-12770 | MS.gene72940:CDS | 40.0% | |
| CACCAGATACAAGCATTATC+TGG | + | 15006:12441-12460 | MS.gene72940:CDS | 40.0% | |
| CAGATAATGCTTGTATCTGG+TGG | - | 15006:12443-12462 | MS.gene72940:intergenic | 40.0% | |
| CTTGACCATTTCTTCTGCTT+TGG | + | 15006:12941-12960 | MS.gene72940:CDS | 40.0% | |
| GATGAGATTCACATGCCTAT+TGG | + | 15006:12218-12237 | MS.gene72940:CDS | 40.0% | |
| GATGCAACCATGTTGTTGAA+TGG | - | 15006:12749-12768 | MS.gene72940:intergenic | 40.0% | |
| GGAGTTAAGTTCCTGCAATA+TGG | - | 15006:11934-11953 | MS.gene72940:intergenic | 40.0% | |
| GGTAATTCCTATGACTGCAA+AGG | + | 15006:12518-12537 | MS.gene72940:CDS | 40.0% | |
| GTGAACCAAAGCAGAAGAAA+TGG | - | 15006:12949-12968 | MS.gene72940:intergenic | 40.0% | |
| GTTGGATATTGTGCACTCTA+TGG | + | 15006:12829-12848 | MS.gene72940:CDS | 40.0% | |
| TATATGACGTACGACATTGG+AGG | + | 15006:12278-12297 | MS.gene72940:CDS | 40.0% | |
| TCAACAACATGGTTGCATCA+AGG | + | 15006:12750-12769 | MS.gene72940:CDS | 40.0% | |
| TCCCAGATAATGCTTGTATC+TGG | - | 15006:12446-12465 | MS.gene72940:intergenic | 40.0% | |
| TGACTCAAACTCCATATTGC+AGG | + | 15006:11920-11939 | MS.gene72940:CDS | 40.0% | |
| TTAAAGGGTTCTCATCCACA+CGG | - | 15006:12082-12101 | MS.gene72940:intergenic | 40.0% | |
| TTGCAGTCATAGGAATTACC+AGG | - | 15006:12518-12537 | MS.gene72940:intergenic | 40.0% | |
| TTGGGTTCAATAAACTGCGA+TGG | + | 15006:13005-13024 | MS.gene72940:CDS | 40.0% | |
| ! | ATTCGGATTGGACTTGACAT+TGG | + | 15006:12644-12663 | MS.gene72940:CDS | 40.0% |
| ! | CAAAACTTATGTGCCGATGT+TGG | + | 15006:12976-12995 | MS.gene72940:CDS | 40.0% |
| ! | GAACATTTGCTGCAAGAATG+AGG | + | 15006:12678-12697 | MS.gene72940:CDS | 40.0% |
| ! | GTGGTTAATTTCAGCACTGA+TGG | + | 15006:13069-13088 | MS.gene72940:CDS | 40.0% |
| ! | GTTGATAGAAAGAATGAGCC+TGG | + | 15006:12497-12516 | MS.gene72940:CDS | 40.0% |
| ! | TCCAACGTGTTTTCGAAGAA+CGG | - | 15006:12815-12834 | MS.gene72940:intergenic | 40.0% |
| !! | TGGAGTGCTTTTCTTGTTCA+CGG | - | 15006:12058-12077 | MS.gene72940:intergenic | 40.0% |
| !!! | GATGATGGTGGACTTGATTT+TGG | + | 15006:12584-12603 | MS.gene72940:CDS | 40.0% |
| AACCCAACTCGATCCAACAT+CGG | - | 15006:12992-13011 | MS.gene72940:intergenic | 45.0% | |
| AAGTCCAATCCGAATCGTTC+CGG | - | 15006:12639-12658 | MS.gene72940:intergenic | 45.0% | |
| ACGGGTAAGATCGATAAGCA+AGG | - | 15006:12039-12058 | MS.gene72940:intergenic | 45.0% | |
| ATCTCATCTGACCCGATCTT+CGG | - | 15006:12206-12225 | MS.gene72940:intergenic | 45.0% | |
| ATCTTCGGTGAGTACCCATA+AGG | - | 15006:12191-12210 | MS.gene72940:intergenic | 45.0% | |
| ATTGGACTTGACATTGGTGG+TGG | + | 15006:12650-12669 | MS.gene72940:CDS | 45.0% | |
| CACACATCCTTTCGAACCTT+AGG | - | 15006:13052-13071 | MS.gene72940:intergenic | 45.0% | |
| CGCAAGGACTCATACTCAAA+GGG | + | 15006:12327-12346 | MS.gene72940:CDS | 45.0% | |
| CTAAGGTTCGAAAGGATGTG+TGG | + | 15006:13050-13069 | MS.gene72940:CDS | 45.0% | |
| CTATGGATGTCATTGGCAAC+TGG | + | 15006:12846-12865 | MS.gene72940:CDS | 45.0% | |
| CTCCACTAACTTACTTGTCC+AGG | + | 15006:12013-12032 | MS.gene72940:CDS | 45.0% | |
| GATGAGCTCAGTATTGCACT+TGG | + | 15006:12152-12171 | MS.gene72940:CDS | 45.0% | |
| GATGATTCAACTACTGCTGC+TGG | + | 15006:12119-12138 | MS.gene72940:CDS | 45.0% | |
| GGATGGTCCATTCAACAACA+TGG | + | 15006:12739-12758 | MS.gene72940:CDS | 45.0% | |
| GTAGATGATGTGCTTTCGCA+AGG | + | 15006:12311-12330 | MS.gene72940:CDS | 45.0% | |
| GTGCACTCTATGGATGTCAT+TGG | + | 15006:12839-12858 | MS.gene72940:CDS | 45.0% | |
| TAAGATCGATAAGCAAGGCC+TGG | - | 15006:12034-12053 | MS.gene72940:intergenic | 45.0% | |
| TATCTGGTGGAGTTGTCCAA+AGG | - | 15006:12430-12449 | MS.gene72940:intergenic | 45.0% | |
| TATGACGTACGACATTGGAG+GGG | + | 15006:12280-12299 | MS.gene72940:CDS | 45.0% | |
| TATGGGTACTCACCGAAGAT+CGG | + | 15006:12191-12210 | MS.gene72940:CDS | 45.0% | |
| TCCGTTCTTCGAAAACACGT+TGG | + | 15006:12811-12830 | MS.gene72940:CDS | 45.0% | |
| TCGCAAGGACTCATACTCAA+AGG | + | 15006:12326-12345 | MS.gene72940:CDS | 45.0% | |
| TCTTCGGTGAGTACCCATAA+GGG | - | 15006:12190-12209 | MS.gene72940:intergenic | 45.0% | |
| TGGACCGGTGAACATGTAAA+TGG | - | 15006:11862-11881 | MS.gene72940:intergenic | 45.0% | |
| TGTAGAGCCAACACCTTTAC+CGG | + | 15006:12400-12419 | MS.gene72940:CDS | 45.0% | |
| ! | TGCGAAAGCACATCATCTAC+AGG | - | 15006:12311-12330 | MS.gene72940:intergenic | 45.0% |
| !! | GGAGTGCTTTTCTTGTTCAC+GGG | - | 15006:12057-12076 | MS.gene72940:intergenic | 45.0% |
| !!! | ATATACAGGGTTTTGAGGCC+AGG | + | 15006:12905-12924 | MS.gene72940:CDS | 45.0% |
| !!! | TATACAGGGTTTTGAGGCCA+GGG | + | 15006:12906-12925 | MS.gene72940:CDS | 45.0% |
| ACCCATAAGGGAGCTTGTGA+GGG | - | 15006:12178-12197 | MS.gene72940:intergenic | 50.0% | |
| AGCATTATCTGGGAGCCCTA+TGG | + | 15006:12452-12471 | MS.gene72940:CDS | 50.0% | |
| AGTCCAATCCGAATCGTTCC+GGG | - | 15006:12638-12657 | MS.gene72940:intergenic | 50.0% | |
| ATGGGTACTCACCGAAGATC+GGG | + | 15006:12192-12211 | MS.gene72940:CDS | 50.0% | |
| CACCTTTACCGGATAGCCTT+TGG | + | 15006:12411-12430 | MS.gene72940:CDS | 50.0% | |
| CTATTGGTGAAGCCTGCTTG+AGG | + | 15006:12234-12253 | MS.gene72940:CDS | 50.0% | |
| CTCAAGCAGGCTTCACCAAT+AGG | - | 15006:12236-12255 | MS.gene72940:intergenic | 50.0% | |
| GGAGTTGTCCAAAGGCTATC+CGG | - | 15006:12422-12441 | MS.gene72940:intergenic | 50.0% | |
| GGCCTGGACAAGTAAGTTAG+TGG | - | 15006:12018-12037 | MS.gene72940:intergenic | 50.0% | |
| GGTGTGAACCATTACCTCGT+CGG | + | 15006:12348-12367 | MS.gene72940:CDS | 50.0% | |
| GTCCAAAGGCTATCCGGTAA+AGG | - | 15006:12416-12435 | MS.gene72940:intergenic | 50.0% | |
| TACCCATAAGGGAGCTTGTG+AGG | - | 15006:12179-12198 | MS.gene72940:intergenic | 50.0% | |
| TGAGTCACTGCTACTCGTAG+AGG | - | 15006:11907-11926 | MS.gene72940:intergenic | 50.0% | |
| TGCCGATGTTGGATCGAGTT+GGG | + | 15006:12987-13006 | MS.gene72940:CDS | 50.0% | |
| TGTGTCAGAGTGTGAGTCTG+TGG | - | 15006:11789-11808 | MS.gene72940:intergenic | 50.0% | |
| ! | AGGCTATCCGGTAAAGGTGT+TGG | - | 15006:12410-12429 | MS.gene72940:intergenic | 50.0% |
| ! | CGGATTGGACTTGACATTGG+TGG | + | 15006:12647-12666 | MS.gene72940:CDS | 50.0% |
| ! | GCTTGCAGCAAGTTGAGCTT+TGG | - | 15006:11958-11977 | MS.gene72940:intergenic | 50.0% |
| ! | TGCAGCAAGTTGAGCTTTGG+TGG | - | 15006:11955-11974 | MS.gene72940:intergenic | 50.0% |
| !! | AGAAAAGCACTCCAACCGTG+TGG | + | 15006:12064-12083 | MS.gene72940:CDS | 50.0% |
| !! | CAAAAGCACCCGGAACGATT+CGG | + | 15006:12627-12646 | MS.gene72940:CDS | 50.0% |
| !! | CTTGACATTGGTGGTGGAAG+TGG | + | 15006:12656-12675 | MS.gene72940:CDS | 50.0% |
| !! | GTGCTTGCAACAAAAGCACC+CGG | + | 15006:12617-12636 | MS.gene72940:CDS | 50.0% |
| !!! | ATACAGGGTTTTGAGGCCAG+GGG | + | 15006:12907-12926 | MS.gene72940:CDS | 50.0% |
| AGCCTGCTTGAGGCTCAATG+AGG | + | 15006:12244-12263 | MS.gene72940:CDS | 55.0% | |
| AGGGTTCTCATCCACACGGT+TGG | - | 15006:12078-12097 | MS.gene72940:intergenic | 55.0% | |
| CTCCTCATTGAGCCTCAAGC+AGG | - | 15006:12249-12268 | MS.gene72940:intergenic | 55.0% | |
| GCCCTCACAAGCTCCCTTAT+GGG | + | 15006:12174-12193 | MS.gene72940:CDS | 55.0% | |
| TCAAGCCAGAATAGTCCCCC+TGG | - | 15006:12926-12945 | MS.gene72940:intergenic | 55.0% | |
| TGGCATCTCCGACGAGGTAA+TGG | - | 15006:12359-12378 | MS.gene72940:intergenic | 55.0% | |
| TTTGGATGGCATCTCCGACG+AGG | - | 15006:12365-12384 | MS.gene72940:intergenic | 55.0% | |
| ! | GTGCCGATGTTGGATCGAGT+TGG | + | 15006:12986-13005 | MS.gene72940:CDS | 55.0% |
| !!! | TACAGGGTTTTGAGGCCAGG+GGG | + | 15006:12908-12927 | MS.gene72940:CDS | 55.0% |
| GGCCCTCACAAGCTCCCTTA+TGG | + | 15006:12173-12192 | MS.gene72940:CDS | 60.0% | |
| TGAGGCCAGGGGGACTATTC+TGG | + | 15006:12918-12937 | MS.gene72940:CDS | 60.0% | |
| ! | GCACCCGGAACGATTCGGAT+TGG | + | 15006:12632-12651 | MS.gene72940:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 15006 | gene | 11729 | 13108 | 11729 | ID=MS.gene72940 |
| 15006 | mRNA | 11729 | 13108 | 11729 | ID=MS.gene72940.t1;Parent=MS.gene72940 |
| 15006 | exon | 11729 | 13108 | 11729 | ID=MS.gene72940.t1.exon1;Parent=MS.gene72940.t1 |
| 15006 | CDS | 11729 | 13108 | 11729 | ID=cds.MS.gene72940.t1;Parent=MS.gene72940.t1 |
| Gene Sequence |
| Protein sequence |
