Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76734.t1 | RHN59424.1 | 92.8 | 554 | 24 | 1 | 1 | 538 | 66 | 619 | 8.30E-199 | 703.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76734.t1 | F4ISY0 | 38.3 | 525 | 254 | 11 | 2 | 504 | 3 | 479 | 1.1e-45 | 186.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76734.t1 | A0A072UHR5 | 92.8 | 554 | 24 | 1 | 1 | 538 | 1 | 554 | 6.0e-199 | 703.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene76734 | 0.811076 | 8.39E-51 | -1.69E-46 |
| MS.gene049159 | MS.gene76734 | 0.816491 | 5.38E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene76734 | 0.806426 | 8.27E-50 | -1.69E-46 |
| MS.gene049821 | MS.gene76734 | 0.825619 | 4.25E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene76734 | 0.82843 | 9.03E-55 | -1.69E-46 |
| MS.gene049979 | MS.gene76734 | 0.801572 | 8.45E-49 | -1.69E-46 |
| MS.gene050020 | MS.gene76734 | 0.831507 | 1.61E-55 | -1.69E-46 |
| MS.gene050719 | MS.gene76734 | 0.802304 | 5.98E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene76734 | 0.847245 | 1.31E-59 | -1.69E-46 |
| MS.gene050808 | MS.gene76734 | 0.813975 | 1.95E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene76734 | 0.806416 | 8.31E-50 | -1.69E-46 |
| MS.gene050959 | MS.gene76734 | 0.816199 | 6.26E-52 | -1.69E-46 |
| MS.gene051180 | MS.gene76734 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene76734 | 0.842315 | 2.79E-58 | -1.69E-46 |
| MS.gene051279 | MS.gene76734 | 0.815146 | 1.07E-51 | -1.69E-46 |
| MS.gene051328 | MS.gene76734 | 0.819573 | 1.08E-52 | -1.69E-46 |
| MS.gene051388 | MS.gene76734 | 0.804198 | 2.42E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene76734 | 0.845013 | 5.29E-59 | -1.69E-46 |
| MS.gene051700 | MS.gene76734 | 0.811388 | 7.18E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene76734 | 0.86751 | 1.30E-65 | -1.69E-46 |
| MS.gene051720 | MS.gene76734 | 0.861881 | 7.51E-64 | -1.69E-46 |
| MS.gene051744 | MS.gene76734 | 0.815414 | 9.36E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene76734 | 0.867981 | 9.16E-66 | -1.69E-46 |
| MS.gene052133 | MS.gene76734 | 0.821359 | 4.21E-53 | -1.69E-46 |
| MS.gene052323 | MS.gene76734 | 0.808529 | 2.96E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene76734 | 0.825942 | 3.56E-54 | -1.69E-46 |
| MS.gene052561 | MS.gene76734 | 0.809817 | 1.57E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene76734 | 0.806006 | 1.01E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene76734 | 0.860203 | 2.43E-63 | -1.69E-46 |
| MS.gene052732 | MS.gene76734 | 0.856907 | 2.34E-62 | -1.69E-46 |
| MS.gene052896 | MS.gene76734 | 0.825082 | 5.69E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene76734 | 0.807527 | 4.84E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene76734 | 0.85899 | 5.64E-63 | -1.69E-46 |
| MS.gene053164 | MS.gene76734 | 0.805021 | 1.63E-49 | -1.69E-46 |
| MS.gene053174 | MS.gene76734 | 0.836989 | 6.77E-57 | -1.69E-46 |
| MS.gene053221 | MS.gene76734 | 0.808433 | 3.10E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene76734 | 0.834621 | 2.70E-56 | -1.69E-46 |
| MS.gene053563 | MS.gene76734 | 0.804796 | 1.82E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene76734 | 0.833554 | 4.99E-56 | -1.69E-46 |
| MS.gene054550 | MS.gene76734 | 0.824608 | 7.36E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene76734 | 0.864338 | 1.31E-64 | -1.69E-46 |
| MS.gene05462 | MS.gene76734 | 0.817658 | 2.94E-52 | -1.69E-46 |
| MS.gene054775 | MS.gene76734 | 0.80058 | 1.35E-48 | -1.69E-46 |
| MS.gene055144 | MS.gene76734 | 0.80776 | 4.32E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene76734 | 0.874529 | 6.29E-68 | -1.69E-46 |
| MS.gene055466 | MS.gene76734 | 0.867728 | 1.10E-65 | -1.69E-46 |
| MS.gene055467 | MS.gene76734 | 0.807242 | 5.56E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene76734 | 0.866193 | 3.41E-65 | -1.69E-46 |
| MS.gene055469 | MS.gene76734 | 0.85456 | 1.13E-61 | -1.69E-46 |
| MS.gene055512 | MS.gene76734 | 0.815078 | 1.11E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene76734 | 0.833087 | 6.52E-56 | -1.69E-46 |
| MS.gene055580 | MS.gene76734 | -0.85392 | 1.74E-61 | -1.69E-46 |
| MS.gene055608 | MS.gene76734 | 0.803149 | 4.00E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene76734 | 0.829071 | 6.32E-55 | -1.69E-46 |
| MS.gene055890 | MS.gene76734 | 0.801586 | 8.40E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene76734 | 0.822199 | 2.69E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene76734 | -0.841345 | 5.03E-58 | -1.69E-46 |
| MS.gene056173 | MS.gene76734 | 0.802331 | 5.90E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene76734 | 0.807189 | 5.71E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene76734 | 0.810981 | 8.80E-51 | -1.69E-46 |
| MS.gene056584 | MS.gene76734 | 0.815112 | 1.09E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene76734 | 0.812195 | 4.79E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene76734 | 0.815571 | 8.64E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene76734 | 0.824972 | 6.04E-54 | -1.69E-46 |
| MS.gene058087 | MS.gene76734 | 0.81934 | 1.22E-52 | -1.69E-46 |
| MS.gene058168 | MS.gene76734 | 0.803682 | 3.10E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene76734 | 0.80461 | 1.99E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene76734 | 0.801966 | 7.02E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene76734 | 0.80777 | 4.30E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene76734 | 0.816623 | 5.03E-52 | -1.69E-46 |
| MS.gene058852 | MS.gene76734 | 0.832941 | 7.09E-56 | -1.69E-46 |
| MS.gene059625 | MS.gene76734 | 0.816905 | 4.35E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene76734 | 0.832458 | 9.35E-56 | -1.69E-46 |
| MS.gene059863 | MS.gene76734 | 0.800637 | 1.31E-48 | -1.69E-46 |
| MS.gene059937 | MS.gene76734 | 0.819898 | 9.12E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene76734 | 0.822036 | 2.94E-53 | -1.69E-46 |
| MS.gene060519 | MS.gene76734 | 0.833666 | 4.68E-56 | -1.69E-46 |
| MS.gene060587 | MS.gene76734 | 0.864038 | 1.62E-64 | -1.69E-46 |
| MS.gene060884 | MS.gene76734 | 0.806317 | 8.72E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76734.t1 | MTR_4g029090 | 93.321 | 554 | 21 | 1 | 1 | 538 | 1 | 554 | 0.0 | 946 |
| MS.gene76734.t1 | MTR_7g072550 | 64.664 | 566 | 155 | 12 | 11 | 538 | 12 | 570 | 0.0 | 635 |
| MS.gene76734.t1 | MTR_3g072350 | 36.789 | 598 | 291 | 11 | 1 | 531 | 1 | 578 | 1.47e-79 | 260 |
| MS.gene76734.t1 | MTR_5g083980 | 37.431 | 545 | 280 | 14 | 18 | 531 | 20 | 534 | 3.61e-68 | 229 |
| MS.gene76734.t1 | MTR_3g072350 | 38.247 | 502 | 237 | 11 | 1 | 430 | 1 | 501 | 1.39e-66 | 224 |
| MS.gene76734.t1 | MTR_3g101660 | 31.790 | 324 | 209 | 4 | 95 | 407 | 534 | 856 | 1.83e-32 | 133 |
| MS.gene76734.t1 | MTR_1g019490 | 32.453 | 265 | 173 | 2 | 148 | 407 | 575 | 838 | 9.99e-26 | 112 |
| MS.gene76734.t1 | MTR_8g070840 | 30.000 | 400 | 209 | 10 | 54 | 417 | 210 | 574 | 3.32e-18 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76734.t1 | AT2G38370 | 46.000 | 550 | 222 | 16 | 2 | 524 | 3 | 504 | 8.83e-116 | 353 |
| MS.gene76734.t1 | AT2G38370 | 46.000 | 550 | 222 | 16 | 2 | 524 | 20 | 521 | 1.23e-115 | 353 |
| MS.gene76734.t1 | AT2G40480 | 39.057 | 530 | 249 | 15 | 14 | 531 | 48 | 515 | 5.23e-75 | 247 |
| MS.gene76734.t1 | AT3G51720 | 38.447 | 515 | 177 | 14 | 18 | 524 | 6 | 388 | 4.25e-69 | 228 |
| MS.gene76734.t1 | AT3G56270 | 34.316 | 475 | 224 | 14 | 3 | 456 | 13 | 420 | 4.20e-42 | 157 |
| MS.gene76734.t1 | AT2G26570 | 32.628 | 331 | 210 | 4 | 81 | 407 | 408 | 729 | 1.33e-33 | 136 |
| MS.gene76734.t1 | AT2G26570 | 45.283 | 106 | 46 | 4 | 12 | 105 | 150 | 255 | 2.81e-11 | 67.0 |
| MS.gene76734.t1 | AT2G26570 | 32.628 | 331 | 210 | 4 | 81 | 407 | 408 | 729 | 1.33e-33 | 136 |
| MS.gene76734.t1 | AT2G26570 | 45.283 | 106 | 46 | 4 | 12 | 105 | 150 | 255 | 2.81e-11 | 67.0 |
| MS.gene76734.t1 | AT4G33390 | 35.897 | 273 | 170 | 2 | 148 | 416 | 459 | 730 | 8.55e-27 | 115 |
| MS.gene76734.t1 | AT5G42880 | 30.970 | 268 | 156 | 4 | 148 | 408 | 423 | 668 | 1.09e-20 | 96.7 |
| MS.gene76734.t1 | AT1G45545 | 29.167 | 264 | 179 | 4 | 156 | 413 | 425 | 686 | 1.03e-16 | 84.0 |
| MS.gene76734.t1 | AT1G45545 | 29.167 | 264 | 179 | 4 | 156 | 413 | 424 | 685 | 1.09e-16 | 84.0 |
Find 88 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGAACATTTCAAGAAAA+TGG | 0.171368 | 4.1:+70853299 | MS.gene76734:CDS |
| GGTTCGGTGGTGTTGGTTAT+TGG | 0.246121 | 4.1:+70851157 | MS.gene76734:CDS |
| CGAAGCAAATGTATCGAAAA+TGG | 0.273101 | 4.1:+70853620 | MS.gene76734:CDS |
| TCTCTGGCATCATCAGTTTC+CGG | 0.279858 | 4.1:-70853938 | None:intergenic |
| TTGAAGAGGCTTTAAGAAAA+TGG | 0.291438 | 4.1:+70853751 | MS.gene76734:CDS |
| TCTGCTAAGAGAAAGAAATT+TGG | 0.309514 | 4.1:+70854101 | MS.gene76734:CDS |
| AGAGCTTGATGCTGGAAAAT+TGG | 0.325183 | 4.1:+70852738 | MS.gene76734:CDS |
| AAGAGAAAGAAATTTGGTTT+TGG | 0.353841 | 4.1:+70854107 | MS.gene76734:CDS |
| CCTGCAGTTTAAGTCTTGTT+TGG | 0.360526 | 4.1:-70853197 | None:intergenic |
| GAAGGCTCTTGAAGAAGCTT+TGG | 0.361979 | 4.1:+70853692 | MS.gene76734:CDS |
| GGTGGTGAACCGGGTTGAAC+CGG | 0.365920 | 4.1:+70851059 | MS.gene76734:CDS |
| TTGAAGCTCTTTCGTAATAT+CGG | 0.374582 | 4.1:-70853262 | None:intergenic |
| CTGAAGCTATGGTGGTGAAC+CGG | 0.383555 | 4.1:+70851049 | MS.gene76734:CDS |
| TGCCTATCAAATTCAAAAGA+TGG | 0.395264 | 4.1:-70854047 | None:intergenic |
| CTCGGCAAGTGCAGCTGCTT+CGG | 0.398865 | 4.1:-70853445 | None:intergenic |
| GGAGGAACAAGCAGTGGAAT+TGG | 0.401433 | 4.1:+70852759 | MS.gene76734:CDS |
| TAAACCTGGACTCACCGAAT+TGG | 0.403358 | 4.1:-70852989 | None:intergenic |
| GTTGAATTTATGTGAAGATA+AGG | 0.409398 | 4.1:+70852915 | MS.gene76734:CDS |
| AGTCGGCTTTAGAACTGGTT+TGG | 0.412171 | 4.1:-70853892 | None:intergenic |
| AGCAGCAACTAATCTAAATT+CGG | 0.412648 | 4.1:-70853394 | None:intergenic |
| ATTCTGAGTTAAACTCTCTC+TGG | 0.432246 | 4.1:-70853139 | None:intergenic |
| CAGCGATATCGTTTGTAGTT+CGG | 0.432690 | 4.1:-70853050 | None:intergenic |
| AAAGAAGCTGTTACTCGGTT+CGG | 0.446194 | 4.1:+70851141 | MS.gene76734:CDS |
| GATAGAGTCGGCTTTAGAAC+TGG | 0.446529 | 4.1:-70853897 | None:intergenic |
| GCAGAACATTTCAAGAAAAT+GGG | 0.446538 | 4.1:+70853300 | MS.gene76734:CDS |
| CCTTCCAATTCGGTGAGTCC+AGG | 0.447560 | 4.1:+70852985 | MS.gene76734:CDS |
| ACGAAAGAATCTCGATGAAA+AGG | 0.462368 | 4.1:+70853982 | MS.gene76734:CDS |
| AAGAGCTTATCGTTAAAGAA+AGG | 0.463956 | 4.1:+70852785 | MS.gene76734:CDS |
| CATCACCTCAAGTTCAAAGT+TGG | 0.465116 | 4.1:-70854173 | None:intergenic |
| CGGTTCACCACCATAGCTTC+AGG | 0.472457 | 4.1:-70851048 | None:intergenic |
| GTTACTCGGTTCGGTGGTGT+TGG | 0.473117 | 4.1:+70851150 | MS.gene76734:CDS |
| GAACCGGGTTCGAAGGAGAA+TGG | 0.477509 | 4.1:+70851075 | MS.gene76734:CDS |
| ATCGCACCTTCAAACTTCTC+TGG | 0.478519 | 4.1:-70853954 | None:intergenic |
| AGAGTAGAGGCTGCAAATAG+AGG | 0.481776 | 4.1:+70853717 | MS.gene76734:CDS |
| AGGGAAGTTAGTAGTTGAAG+AGG | 0.491762 | 4.1:+70853737 | MS.gene76734:CDS |
| AATGGAAATTCCTGAAGCTA+TGG | 0.498017 | 4.1:+70851038 | None:intergenic |
| AACACAGAAGAGCTTGATGC+TGG | 0.508566 | 4.1:+70852730 | MS.gene76734:CDS |
| GATGAAAAGGAAAGTGTCGT+TGG | 0.508711 | 4.1:+70853995 | MS.gene76734:CDS |
| GAGTCGTGTTCCTTCCAATT+CGG | 0.510167 | 4.1:+70852975 | MS.gene76734:CDS |
| AATTCCCTTAAAATTAAACC+TGG | 0.512515 | 4.1:-70853003 | None:intergenic |
| AGAGCTTATCGTTAAAGAAA+GGG | 0.516851 | 4.1:+70852786 | MS.gene76734:CDS |
| GCTTCTTTAACAGACTCAAA+TGG | 0.523386 | 4.1:-70851126 | None:intergenic |
| CCGGGTTGAACCGGGTTCGA+AGG | 0.523792 | 4.1:+70851068 | MS.gene76734:CDS |
| CGCTGATGTTCGAGTTTCTG+TGG | 0.525095 | 4.1:+70853068 | MS.gene76734:CDS |
| AAACCATTCTCCTTCGAACC+CGG | 0.525478 | 4.1:-70851078 | None:intergenic |
| CCTTCGAACCCGGTTCAACC+CGG | 0.529555 | 4.1:-70851068 | None:intergenic |
| TCTCGGTTATTCGACATAAG+TGG | 0.531004 | 4.1:+70853846 | MS.gene76734:CDS |
| CTGTTAAAGAAGCTGTTACT+CGG | 0.535629 | 4.1:+70851136 | MS.gene76734:CDS |
| ATGAAAAGGAAAGTGTCGTT+GGG | 0.538173 | 4.1:+70853996 | MS.gene76734:CDS |
| AGCTTCTTCGATAGTGAGAA+GGG | 0.538244 | 4.1:-70853824 | None:intergenic |
| TTTCTTGAAATGTTCTGCCT+CGG | 0.538325 | 4.1:-70853295 | None:intergenic |
| CGATAGGTCAAATATTGAGC+CGG | 0.541111 | 4.1:+70853919 | MS.gene76734:CDS |
| AAGAGTTGGAAAGTACCAAA+AGG | 0.544666 | 4.1:+70852827 | MS.gene76734:CDS |
| GCTTGATGCTGGAAAATTGG+AGG | 0.546478 | 4.1:+70852741 | MS.gene76734:CDS |
| AGAAGCCAACTTTGAACTTG+AGG | 0.546691 | 4.1:+70854168 | MS.gene76734:CDS |
| GGCGATCCGAGGGTAACAAA+AGG | 0.547667 | 4.1:+70853772 | MS.gene76734:CDS |
| GAGTAGAGGCTGCAAATAGA+GGG | 0.556599 | 4.1:+70853718 | MS.gene76734:CDS |
| AAAGCGTTATCTTATTATGA+CGG | 0.559732 | 4.1:+70853471 | MS.gene76734:CDS |
| GTGTCGTTGGGTCAGATGCT+TGG | 0.562470 | 4.1:+70854008 | MS.gene76734:CDS |
| TAGAGCATTATACTCTTCAA+AGG | 0.563624 | 4.1:-70853529 | None:intergenic |
| AGCTCTTTCGTAATATCGGA+AGG | 0.563753 | 4.1:-70853258 | None:intergenic |
| CGAAGTTAAAACAAGCAAGA+AGG | 0.565482 | 4.1:+70853674 | MS.gene76734:CDS |
| GTGGTGAACCGGGTTGAACC+GGG | 0.565751 | 4.1:+70851060 | MS.gene76734:CDS |
| GAGCTTCTTCGATAGTGAGA+AGG | 0.567321 | 4.1:-70853825 | None:intergenic |
| CTCGGTTATTCGACATAAGT+GGG | 0.570034 | 4.1:+70853847 | MS.gene76734:CDS |
| GATGAAGAAAAGGAAAACCA+TGG | 0.573361 | 4.1:+70852952 | MS.gene76734:CDS |
| TGAAGCTATGGTGGTGAACC+GGG | 0.577121 | 4.1:+70851050 | MS.gene76734:CDS |
| AGAAGCTTTGGAAAGAGTAG+AGG | 0.581826 | 4.1:+70853704 | MS.gene76734:CDS |
| CCTGGACTCACCGAATTGGA+AGG | 0.583487 | 4.1:-70852985 | None:intergenic |
| ATGATGCCAGAGAAGTTTGA+AGG | 0.585755 | 4.1:+70853948 | MS.gene76734:CDS |
| CTCACTATCGAAGAAGCTCT+CGG | 0.599628 | 4.1:+70853829 | MS.gene76734:CDS |
| TGGAAGGAACACGACTCCCA+TGG | 0.603144 | 4.1:-70852969 | None:intergenic |
| ATTTGACCTATCGATAGAGT+CGG | 0.604595 | 4.1:-70853909 | None:intergenic |
| CCAAACAAGACTTAAACTGC+AGG | 0.604751 | 4.1:+70853197 | MS.gene76734:CDS |
| GACTGTGTGCAAAACTGTGA+TGG | 0.605971 | 4.1:+70853495 | MS.gene76734:CDS |
| CTAAAGCCGACTCTATCGAT+AGG | 0.608619 | 4.1:+70853903 | MS.gene76734:CDS |
| AAAATTGGAGGAACAAGCAG+TGG | 0.610904 | 4.1:+70852753 | MS.gene76734:CDS |
| ATGAAGAAAAGGAAAACCAT+GGG | 0.617720 | 4.1:+70852953 | MS.gene76734:CDS |
| TTTAAGAAAATGGCGATCCG+AGG | 0.618775 | 4.1:+70853761 | MS.gene76734:CDS |
| GAAGCTGTTACTCGGTTCGG+TGG | 0.622084 | 4.1:+70851144 | MS.gene76734:CDS |
| TTAAGAAAATGGCGATCCGA+GGG | 0.633233 | 4.1:+70853762 | MS.gene76734:CDS |
| TCTAACATGCAAAGCTCGAG+AGG | 0.633623 | 4.1:+70853548 | MS.gene76734:CDS |
| AACAAGACTTAAACTGCAGG+TGG | 0.640787 | 4.1:+70853200 | MS.gene76734:CDS |
| GGAAATTCCTGAAGCTATGG+TGG | 0.645015 | 4.1:+70851041 | MS.gene76734:CDS |
| ACTCAACAAGAAACTTCAGA+AGG | 0.651200 | 4.1:+70853095 | MS.gene76734:CDS |
| AAAGAAGCTGAAATTGAATG+TGG | 0.654834 | 4.1:+70853225 | MS.gene76734:CDS |
| GAAGGAGAATGGTTTAAGAG+CGG | 0.656453 | 4.1:+70851086 | MS.gene76734:CDS |
| GCTTCAACGATTGAGTTCCG+AGG | 0.676528 | 4.1:+70853278 | MS.gene76734:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAATATTTTTTTTAT+TGG | + | chr4.1:70851320-70851339 | MS.gene76734:intron | 0.0% |
| !! | CATATGAAAAATAATATATT+TGG | + | chr4.1:70851764-70851783 | MS.gene76734:intron | 10.0% |
| !!! | ATTTTTGTATTTTCTAATTA+GGG | + | chr4.1:70851371-70851390 | MS.gene76734:intron | 10.0% |
| !!! | TATTTTTGTATTTTCTAATT+AGG | + | chr4.1:70851370-70851389 | MS.gene76734:intron | 10.0% |
| !! | ATACATTCATTGAAAAAATA+GGG | - | chr4.1:70852442-70852461 | None:intergenic | 15.0% |
| !! | GAAAAATAATATATTTGGAT+AGG | + | chr4.1:70851769-70851788 | MS.gene76734:intron | 15.0% |
| !!! | AAAAACCTTATGTTTTTTTT+TGG | + | chr4.1:70852589-70852608 | MS.gene76734:intron | 15.0% |
| !!! | ATGAACATAGTTTTAAATTA+TGG | - | chr4.1:70852562-70852581 | None:intergenic | 15.0% |
| !!! | TAATTTAAAACTATGTTCAT+AGG | + | chr4.1:70852562-70852581 | MS.gene76734:intron | 15.0% |
| !! | AACATAAAAATAAATACCTG+AGG | - | chr4.1:70851231-70851250 | None:intergenic | 20.0% |
| !! | AATAACAAAAATGCAAACTT+TGG | - | chr4.1:70851301-70851320 | None:intergenic | 20.0% |
| !! | CATACATTCATTGAAAAAAT+AGG | - | chr4.1:70852443-70852462 | None:intergenic | 20.0% |
| !! | CTATTATTATGATTATGAAC+AGG | - | chr4.1:70851186-70851205 | None:intergenic | 20.0% |
| !! | GAAATCCAAAAAAAAACATA+AGG | - | chr4.1:70852597-70852616 | None:intergenic | 20.0% |
| !!! | AGAATTGATTTTATGATGTT+TGG | + | chr4.1:70851854-70851873 | MS.gene76734:intron | 20.0% |
| !!! | GAAAATGGATGTTTTAAAAA+GGG | + | chr4.1:70853635-70853654 | MS.gene76734:CDS | 20.0% |
| !!! | TTTTTTATTGGTAGTTGTTT+GGG | + | chr4.1:70851332-70851351 | MS.gene76734:intron | 20.0% |
| !!! | TTTTTTTATTGGTAGTTGTT+TGG | + | chr4.1:70851331-70851350 | MS.gene76734:intron | 20.0% |
| ! | AATTCCCTTAAAATTAAACC+TGG | - | chr4.1:70853006-70853025 | None:intergenic | 25.0% |
| ! | AGATAAAAGTGAGTTATGTT+TGG | - | chr4.1:70851978-70851997 | None:intergenic | 25.0% |
| ! | CAACAATATAAACATCTTAG+AGG | - | chr4.1:70852535-70852554 | None:intergenic | 25.0% |
| ! | GTTGAATTTATGTGAAGATA+AGG | + | chr4.1:70852915-70852934 | MS.gene76734:CDS | 25.0% |
| ! | TATGAATTATGAATGCTCTT+TGG | + | chr4.1:70852256-70852275 | MS.gene76734:intron | 25.0% |
| ! | TATGATGTTTGGATGATTTA+AGG | + | chr4.1:70851865-70851884 | MS.gene76734:intron | 25.0% |
| ! | TGAGAAAAAAGATGAAGAAA+AGG | + | chr4.1:70852942-70852961 | MS.gene76734:CDS | 25.0% |
| ! | TTCAAAAATAACTTCACTAG+AGG | + | chr4.1:70853164-70853183 | MS.gene76734:CDS | 25.0% |
| ! | TTCAACCTAGAAATCAAAAT+CGG | + | chr4.1:70852171-70852190 | MS.gene76734:intron | 25.0% |
| !! | AAAGCGTTATCTTATTATGA+CGG | + | chr4.1:70853471-70853490 | MS.gene76734:CDS | 25.0% |
| !! | ATAAGATAACGCTTTTATCT+CGG | - | chr4.1:70853466-70853485 | None:intergenic | 25.0% |
| !! | ATCCATCTTTTGAATTTGAT+AGG | + | chr4.1:70854045-70854064 | MS.gene76734:CDS | 25.0% |
| !! | TGTTTGATTTCAATTCTAGA+GGG | + | chr4.1:70851807-70851826 | MS.gene76734:intron | 25.0% |
| !! | TTTGGATTTCATACGTTTTT+GGG | + | chr4.1:70852607-70852626 | MS.gene76734:intron | 25.0% |
| !! | TTTTACCATGATTATTACAG+TGG | + | chr4.1:70852414-70852433 | MS.gene76734:intron | 25.0% |
| !! | TTTTGGATTTCATACGTTTT+TGG | + | chr4.1:70852606-70852625 | MS.gene76734:intron | 25.0% |
| !!! | AAGAGAAAGAAATTTGGTTT+TGG | + | chr4.1:70854107-70854126 | MS.gene76734:CDS | 25.0% |
| !!! | CGAAAATGGATGTTTTAAAA+AGG | + | chr4.1:70853634-70853653 | MS.gene76734:CDS | 25.0% |
| !!! | TCTTGATGTTTTAAAAGAGT+TGG | + | chr4.1:70852813-70852832 | MS.gene76734:CDS | 25.0% |
| AAAGAAGCTGAAATTGAATG+TGG | + | chr4.1:70853225-70853244 | MS.gene76734:CDS | 30.0% | |
| AAATTGCAGTCAAAATGTGA+TGG | + | chr4.1:70852480-70852499 | MS.gene76734:intron | 30.0% | |
| AAGAGCTTATCGTTAAAGAA+AGG | + | chr4.1:70852785-70852804 | MS.gene76734:CDS | 30.0% | |
| AATTGCAGTCAAAATGTGAT+GGG | + | chr4.1:70852481-70852500 | MS.gene76734:intron | 30.0% | |
| AGAGCTTATCGTTAAAGAAA+GGG | + | chr4.1:70852786-70852805 | MS.gene76734:CDS | 30.0% | |
| AGCAGCAACTAATCTAAATT+CGG | - | chr4.1:70853397-70853416 | None:intergenic | 30.0% | |
| ATGAAGAAAAGGAAAACCAT+GGG | + | chr4.1:70852953-70852972 | MS.gene76734:CDS | 30.0% | |
| CTTCCAAATCATTTGTCATT+AGG | + | chr4.1:70852197-70852216 | MS.gene76734:intron | 30.0% | |
| GCAGAACATTTCAAGAAAAT+GGG | + | chr4.1:70853300-70853319 | MS.gene76734:CDS | 30.0% | |
| GTATTGAAGCTACAATTTGT+AGG | + | chr4.1:70851887-70851906 | MS.gene76734:intron | 30.0% | |
| TAAAAGTGAGTTATGTTTGG+AGG | - | chr4.1:70851975-70851994 | None:intergenic | 30.0% | |
| TAAATACCTGAGGAATAATG+AGG | - | chr4.1:70851221-70851240 | None:intergenic | 30.0% | |
| TATTAACCTCATTATTCCTC+AGG | + | chr4.1:70851212-70851231 | MS.gene76734:intron | 30.0% | |
| TCAACCTAGAAATCAAAATC+GGG | + | chr4.1:70852172-70852191 | MS.gene76734:intron | 30.0% | |
| TCTGCTAAGAGAAAGAAATT+TGG | + | chr4.1:70854101-70854120 | MS.gene76734:CDS | 30.0% | |
| TGCCTATCAAATTCAAAAGA+TGG | - | chr4.1:70854050-70854069 | None:intergenic | 30.0% | |
| TGGATTTAGCAACGAAATTA+AGG | - | chr4.1:70851938-70851957 | None:intergenic | 30.0% | |
| TTGAAGCTCTTTCGTAATAT+CGG | - | chr4.1:70853265-70853284 | None:intergenic | 30.0% | |
| ! | AAGCTACAATTTGTAGGTTT+TGG | + | chr4.1:70851893-70851912 | MS.gene76734:intron | 30.0% |
| ! | ATTTTCTAATTAGGGAGACT+TGG | + | chr4.1:70851379-70851398 | MS.gene76734:intron | 30.0% |
| ! | GTGTTTGATTTCAATTCTAG+AGG | + | chr4.1:70851806-70851825 | MS.gene76734:intron | 30.0% |
| ! | TAGAGCATTATACTCTTCAA+AGG | - | chr4.1:70853532-70853551 | None:intergenic | 30.0% |
| ! | TTGGATTTCATACGTTTTTG+GGG | + | chr4.1:70852608-70852627 | MS.gene76734:intron | 30.0% |
| !! | GAGTCCAGGTTTAATTTTAA+GGG | + | chr4.1:70852999-70853018 | MS.gene76734:CDS | 30.0% |
| !! | TGAGTCCAGGTTTAATTTTA+AGG | + | chr4.1:70852998-70853017 | MS.gene76734:CDS | 30.0% |
| !! | TTGAAGAGGCTTTAAGAAAA+TGG | + | chr4.1:70853751-70853770 | MS.gene76734:CDS | 30.0% |
| !!! | AGAATTTTTCAAGACACAGT+TGG | + | chr4.1:70851453-70851472 | MS.gene76734:intron | 30.0% |
| !!! | TTTTGGGGGTATTTTCTTTT+TGG | + | chr4.1:70852623-70852642 | MS.gene76734:intron | 30.0% |
| AAAAATGAAGGAAGCTGCTA+GGG | + | chr4.1:70853419-70853438 | MS.gene76734:CDS | 35.0% | |
| ACGAAAGAATCTCGATGAAA+AGG | + | chr4.1:70853982-70854001 | MS.gene76734:CDS | 35.0% | |
| ACTCAACAAGAAACTTCAGA+AGG | + | chr4.1:70853095-70853114 | MS.gene76734:CDS | 35.0% | |
| AGACTTGGATCTGGATATAT+AGG | + | chr4.1:70851394-70851413 | MS.gene76734:intron | 35.0% | |
| ATTCTGAGTTAAACTCTCTC+TGG | - | chr4.1:70853142-70853161 | None:intergenic | 35.0% | |
| ATTTGACCTATCGATAGAGT+CGG | - | chr4.1:70853912-70853931 | None:intergenic | 35.0% | |
| CCAAATCATTTGTCATTAGG+TGG | + | chr4.1:70852200-70852219 | MS.gene76734:intron | 35.0% | |
| CCACCTAATGACAAATGATT+TGG | - | chr4.1:70852203-70852222 | None:intergenic | 35.0% | |
| CGAAGCAAATGTATCGAAAA+TGG | + | chr4.1:70853620-70853639 | MS.gene76734:CDS | 35.0% | |
| CGAAGTTAAAACAAGCAAGA+AGG | + | chr4.1:70853674-70853693 | MS.gene76734:CDS | 35.0% | |
| CTGTTAAAGAAGCTGTTACT+CGG | + | chr4.1:70851136-70851155 | MS.gene76734:CDS | 35.0% | |
| GAGATATAGCATTGCTCTAT+AGG | + | chr4.1:70851604-70851623 | MS.gene76734:intron | 35.0% | |
| GATGAAGAAAAGGAAAACCA+TGG | + | chr4.1:70852952-70852971 | MS.gene76734:CDS | 35.0% | |
| GCTTCTTTAACAGACTCAAA+TGG | - | chr4.1:70851129-70851148 | None:intergenic | 35.0% | |
| GGAAGTAGATTCTGGTAATT+TGG | + | chr4.1:70852119-70852138 | MS.gene76734:intron | 35.0% | |
| GGCAGAACATTTCAAGAAAA+TGG | + | chr4.1:70853299-70853318 | MS.gene76734:CDS | 35.0% | |
| TGGATCTGGATATATAGGTA+TGG | + | chr4.1:70851399-70851418 | MS.gene76734:intron | 35.0% | |
| TTGACTGCAATTTCGAATCA+CGG | - | chr4.1:70852473-70852492 | None:intergenic | 35.0% | |
| TTTCTTGAAATGTTCTGCCT+CGG | - | chr4.1:70853298-70853317 | None:intergenic | 35.0% | |
| ! | ACATCAAAGGAGTTCTAACT+AGG | - | chr4.1:70852286-70852305 | None:intergenic | 35.0% |
| ! | CAGATTTTCAACAAGCCTTT+TGG | - | chr4.1:70852845-70852864 | None:intergenic | 35.0% |
| ! | GATTCTGGTAATTTGGAGTT+TGG | + | chr4.1:70852126-70852145 | MS.gene76734:intron | 35.0% |
| ! | GGTTCAGCTTTTACAAGAAT+TGG | - | chr4.1:70852034-70852053 | None:intergenic | 35.0% |
| ! | TTTCTAGGTTGAACAACTCT+TGG | - | chr4.1:70852164-70852183 | None:intergenic | 35.0% |
| ! | TTTTCGCAAAACCAAAACTG+CGG | - | chr4.1:70852512-70852531 | None:intergenic | 35.0% |
| !! | AAGAGTTGGAAAGTACCAAA+AGG | + | chr4.1:70852827-70852846 | MS.gene76734:CDS | 35.0% |
| !! | ATGAAAAGGAAAGTGTCGTT+GGG | + | chr4.1:70853996-70854015 | MS.gene76734:CDS | 35.0% |
| !! | TGGAGGCATTTATGTAAAAG+TGG | - | chr4.1:70851958-70851977 | None:intergenic | 35.0% |
| !! | TGGATTTCATACGTTTTTGG+GGG | + | chr4.1:70852609-70852628 | MS.gene76734:intron | 35.0% |
| !!! | AGAACCCGATTTTGATTTCT+AGG | - | chr4.1:70852179-70852198 | None:intergenic | 35.0% |
| !!! | CAACCTCTAGAATCACTTTT+TGG | - | chr4.1:70851833-70851852 | None:intergenic | 35.0% |
| !!! | GGATGTTTTAAAAAGGGTTG+AGG | + | chr4.1:70853641-70853660 | MS.gene76734:CDS | 35.0% |
| AAAATTGGAGGAACAAGCAG+TGG | + | chr4.1:70852753-70852772 | MS.gene76734:CDS | 40.0% | |
| AAAGAAGCTGTTACTCGGTT+CGG | + | chr4.1:70851141-70851160 | MS.gene76734:CDS | 40.0% | |
| AACAAGACTTAAACTGCAGG+TGG | + | chr4.1:70853200-70853219 | MS.gene76734:CDS | 40.0% | |
| AAGCTGAACCAAACATACAC+TGG | + | chr4.1:70852044-70852063 | MS.gene76734:intron | 40.0% | |
| ACCAACCAAGTTGTCAGTTT+GGG | + | chr4.1:70852316-70852335 | MS.gene76734:intron | 40.0% | |
| AGAAGCCAACTTTGAACTTG+AGG | + | chr4.1:70854168-70854187 | MS.gene76734:CDS | 40.0% | |
| AGAGCTTGATGCTGGAAAAT+TGG | + | chr4.1:70852738-70852757 | MS.gene76734:CDS | 40.0% | |
| AGCTCTTTCGTAATATCGGA+AGG | - | chr4.1:70853261-70853280 | None:intergenic | 40.0% | |
| AGCTTCTTCGATAGTGAGAA+GGG | - | chr4.1:70853827-70853846 | None:intergenic | 40.0% | |
| AGGGAAGTTAGTAGTTGAAG+AGG | + | chr4.1:70853737-70853756 | MS.gene76734:CDS | 40.0% | |
| AGTTGCTGCTCGAAAAATGA+AGG | + | chr4.1:70853407-70853426 | MS.gene76734:CDS | 40.0% | |
| ATGATGCCAGAGAAGTTTGA+AGG | + | chr4.1:70853948-70853967 | MS.gene76734:CDS | 40.0% | |
| CAAACATACACTGGTGGTTT+CGG | + | chr4.1:70852053-70852072 | MS.gene76734:intron | 40.0% | |
| CAGCGATATCGTTTGTAGTT+CGG | - | chr4.1:70853053-70853072 | None:intergenic | 40.0% | |
| CCAAACAAGACTTAAACTGC+AGG | + | chr4.1:70853197-70853216 | MS.gene76734:CDS | 40.0% | |
| CGATAGGTCAAATATTGAGC+CGG | + | chr4.1:70853919-70853938 | MS.gene76734:CDS | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | - | chr4.1:70851529-70851548 | None:intergenic | 40.0% | |
| CTCGGTTATTCGACATAAGT+GGG | + | chr4.1:70853847-70853866 | MS.gene76734:CDS | 40.0% | |
| GAAAAATGAAGGAAGCTGCT+AGG | + | chr4.1:70853418-70853437 | MS.gene76734:CDS | 40.0% | |
| GAAGGAGAATGGTTTAAGAG+CGG | + | chr4.1:70851086-70851105 | MS.gene76734:CDS | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | chr4.1:70851532-70851551 | None:intergenic | 40.0% | |
| GGCAAATAGTGCATTGTGAT+TGG | + | chr4.1:70851540-70851559 | MS.gene76734:intron | 40.0% | |
| TAATTAGGGAGACTTGGATC+TGG | + | chr4.1:70851385-70851404 | MS.gene76734:intron | 40.0% | |
| TCTCGGTTATTCGACATAAG+TGG | + | chr4.1:70853846-70853865 | MS.gene76734:CDS | 40.0% | |
| TCTTCTAACTAAGACACGAG+CGG | - | chr4.1:70852236-70852255 | None:intergenic | 40.0% | |
| TTAAGAAAATGGCGATCCGA+GGG | + | chr4.1:70853762-70853781 | MS.gene76734:CDS | 40.0% | |
| TTCATCCCAAACTGACAACT+TGG | - | chr4.1:70852324-70852343 | None:intergenic | 40.0% | |
| TTTAAGAAAATGGCGATCCG+AGG | + | chr4.1:70853761-70853780 | MS.gene76734:CDS | 40.0% | |
| ! | TCAAAGGAGTTCTAACTAGG+AGG | - | chr4.1:70852283-70852302 | None:intergenic | 40.0% |
| !! | AGAAGCTTTGGAAAGAGTAG+AGG | + | chr4.1:70853704-70853723 | MS.gene76734:CDS | 40.0% |
| !! | CCTGCAGTTTAAGTCTTGTT+TGG | - | chr4.1:70853200-70853219 | None:intergenic | 40.0% |
| !! | GATGAAAAGGAAAGTGTCGT+TGG | + | chr4.1:70853995-70854014 | MS.gene76734:CDS | 40.0% |
| AAACCATTCTCCTTCGAACC+CGG | - | chr4.1:70851081-70851100 | None:intergenic | 45.0% | |
| AACACAGAAGAGCTTGATGC+TGG | + | chr4.1:70852730-70852749 | MS.gene76734:CDS | 45.0% | |
| AGAGTAGAGGCTGCAAATAG+AGG | + | chr4.1:70853717-70853736 | MS.gene76734:CDS | 45.0% | |
| ATCGCACCTTCAAACTTCTC+TGG | - | chr4.1:70853957-70853976 | None:intergenic | 45.0% | |
| CACCAACCAAGTTGTCAGTT+TGG | + | chr4.1:70852315-70852334 | MS.gene76734:intron | 45.0% | |
| CGAAACCACCAGTGTATGTT+TGG | - | chr4.1:70852055-70852074 | None:intergenic | 45.0% | |
| CTCACTATCGAAGAAGCTCT+CGG | + | chr4.1:70853829-70853848 | MS.gene76734:CDS | 45.0% | |
| CTGAACCAAACATACACTGG+TGG | + | chr4.1:70852047-70852066 | MS.gene76734:intron | 45.0% | |
| GAAGGCTCTTGAAGAAGCTT+TGG | + | chr4.1:70853692-70853711 | MS.gene76734:CDS | 45.0% | |
| GACTGTGTGCAAAACTGTGA+TGG | + | chr4.1:70853495-70853514 | MS.gene76734:CDS | 45.0% | |
| GAGCTTCTTCGATAGTGAGA+AGG | - | chr4.1:70853828-70853847 | None:intergenic | 45.0% | |
| GAGTAGAGGCTGCAAATAGA+GGG | + | chr4.1:70853718-70853737 | MS.gene76734:CDS | 45.0% | |
| GAGTCGTGTTCCTTCCAATT+CGG | + | chr4.1:70852975-70852994 | MS.gene76734:CDS | 45.0% | |
| GCTTGATGCTGGAAAATTGG+AGG | + | chr4.1:70852741-70852760 | MS.gene76734:CDS | 45.0% | |
| GGAAATTCCTGAAGCTATGG+TGG | + | chr4.1:70851041-70851060 | MS.gene76734:CDS | 45.0% | |
| GGGAGCCACTGTAATAATCA+TGG | - | chr4.1:70852422-70852441 | None:intergenic | 45.0% | |
| GGGCCAAAAAGTGATTCTAG+AGG | + | chr4.1:70851827-70851846 | MS.gene76734:intron | 45.0% | |
| TAAACCTGGACTCACCGAAT+TGG | - | chr4.1:70852992-70853011 | None:intergenic | 45.0% | |
| TACCAGAATCTACTTCCCCT+AGG | - | chr4.1:70852116-70852135 | None:intergenic | 45.0% | |
| TACTTCCCCTAGGAACTAGA+GGG | - | chr4.1:70852106-70852125 | None:intergenic | 45.0% | |
| TCCCAAACTGACAACTTGGT+TGG | - | chr4.1:70852320-70852339 | None:intergenic | 45.0% | |
| TCTAACATGCAAAGCTCGAG+AGG | + | chr4.1:70853548-70853567 | MS.gene76734:CDS | 45.0% | |
| TCTCTGGCATCATCAGTTTC+CGG | - | chr4.1:70853941-70853960 | None:intergenic | 45.0% | |
| TTCCTAGGGGAAGTAGATTC+TGG | + | chr4.1:70852111-70852130 | MS.gene76734:intron | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr4.1:70851512-70851531 | None:intergenic | 45.0% |
| ! | CTAAAGCCGACTCTATCGAT+AGG | + | chr4.1:70853903-70853922 | MS.gene76734:CDS | 45.0% |
| ! | CTGGTAATTTGGAGTTTGGC+CGG | + | chr4.1:70852130-70852149 | MS.gene76734:intron | 45.0% |
| ! | TGATCGCCTTTTGTTACCCT+CGG | - | chr4.1:70853781-70853800 | None:intergenic | 45.0% |
| ! | TGCTTACCCTCTAGTTCCTA+GGG | + | chr4.1:70852097-70852116 | MS.gene76734:intron | 45.0% |
| !! | AGTCGGCTTTAGAACTGGTT+TGG | - | chr4.1:70853895-70853914 | None:intergenic | 45.0% |
| !! | GATAGAGTCGGCTTTAGAAC+TGG | - | chr4.1:70853900-70853919 | None:intergenic | 45.0% |
| ACAACTCTTGGCCAGACTTC+CGG | - | chr4.1:70852152-70852171 | None:intergenic | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | + | chr4.1:70851519-70851538 | MS.gene76734:intron | 50.0% | |
| CGCAAAACCAAAACTGCGGT+TGG | - | chr4.1:70852508-70852527 | None:intergenic | 50.0% | |
| CTACTTCCCCTAGGAACTAG+AGG | - | chr4.1:70852107-70852126 | None:intergenic | 50.0% | |
| GCTTCAACGATTGAGTTCCG+AGG | + | chr4.1:70853278-70853297 | MS.gene76734:CDS | 50.0% | |
| GGAGGAACAAGCAGTGGAAT+TGG | + | chr4.1:70852759-70852778 | MS.gene76734:CDS | 50.0% | |
| GGTGAGCTGAGGAACATCAA+AGG | - | chr4.1:70852299-70852318 | None:intergenic | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | - | chr4.1:70851524-70851543 | None:intergenic | 50.0% | |
| ! | CGCTGATGTTCGAGTTTCTG+TGG | + | chr4.1:70853068-70853087 | MS.gene76734:CDS | 50.0% |
| ! | CTGAAGCTATGGTGGTGAAC+CGG | + | chr4.1:70851049-70851068 | MS.gene76734:CDS | 50.0% |
| ! | GCTTACCCTCTAGTTCCTAG+GGG | + | chr4.1:70852098-70852117 | MS.gene76734:intron | 50.0% |
| ! | GTGCTTACCCTCTAGTTCCT+AGG | + | chr4.1:70852096-70852115 | MS.gene76734:intron | 50.0% |
| ! | TGAAGCTATGGTGGTGAACC+GGG | + | chr4.1:70851050-70851069 | MS.gene76734:CDS | 50.0% |
| !! | ACAACTTGGTTGGTGAGCTG+AGG | - | chr4.1:70852310-70852329 | None:intergenic | 50.0% |
| !! | GGTTCGGTGGTGTTGGTTAT+TGG | + | chr4.1:70851157-70851176 | MS.gene76734:CDS | 50.0% |
| CCTGGACTCACCGAATTGGA+AGG | - | chr4.1:70852988-70853007 | None:intergenic | 55.0% | |
| CGGTTCACCACCATAGCTTC+AGG | - | chr4.1:70851051-70851070 | None:intergenic | 55.0% | |
| GAACCGGGTTCGAAGGAGAA+TGG | + | chr4.1:70851075-70851094 | MS.gene76734:CDS | 55.0% | |
| GGCGATCCGAGGGTAACAAA+AGG | + | chr4.1:70853772-70853791 | MS.gene76734:CDS | 55.0% | |
| TGGAAGGAACACGACTCCCA+TGG | - | chr4.1:70852972-70852991 | None:intergenic | 55.0% | |
| TTGGAGTTTGGCCGGAAGTC+TGG | + | chr4.1:70852138-70852157 | MS.gene76734:intron | 55.0% | |
| ! | CCTTCCAATTCGGTGAGTCC+AGG | + | chr4.1:70852985-70853004 | MS.gene76734:CDS | 55.0% |
| ! | GATGGGTCCAACCGCAGTTT+TGG | + | chr4.1:70852498-70852517 | MS.gene76734:intron | 55.0% |
| ! | GTGTCGTTGGGTCAGATGCT+TGG | + | chr4.1:70854008-70854027 | MS.gene76734:CDS | 55.0% |
| !! | GAAGCTGTTACTCGGTTCGG+TGG | + | chr4.1:70851144-70851163 | MS.gene76734:CDS | 55.0% |
| !! | GTTACTCGGTTCGGTGGTGT+TGG | + | chr4.1:70851150-70851169 | MS.gene76734:CDS | 55.0% |
| CCTTCGAACCCGGTTCAACC+CGG | - | chr4.1:70851071-70851090 | None:intergenic | 60.0% | |
| CTCGGCAAGTGCAGCTGCTT+CGG | - | chr4.1:70853448-70853467 | None:intergenic | 60.0% | |
| ! | GGTGGTGAACCGGGTTGAAC+CGG | + | chr4.1:70851059-70851078 | MS.gene76734:CDS | 60.0% |
| ! | GTGGTGAACCGGGTTGAACC+GGG | + | chr4.1:70851060-70851079 | MS.gene76734:CDS | 60.0% |
| ! | CCGGGTTGAACCGGGTTCGA+AGG | + | chr4.1:70851068-70851087 | MS.gene76734:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 70851039 | 70854193 | 70851039 | ID=MS.gene76734 |
| chr4.1 | mRNA | 70851039 | 70854193 | 70851039 | ID=MS.gene76734.t1;Parent=MS.gene76734 |
| chr4.1 | exon | 70851039 | 70851185 | 70851039 | ID=MS.gene76734.t1.exon1;Parent=MS.gene76734.t1 |
| chr4.1 | CDS | 70851039 | 70851185 | 70851039 | ID=cds.MS.gene76734.t1;Parent=MS.gene76734.t1 |
| chr4.1 | exon | 70852724 | 70854193 | 70852724 | ID=MS.gene76734.t1.exon2;Parent=MS.gene76734.t1 |
| chr4.1 | CDS | 70852724 | 70854193 | 70852724 | ID=cds.MS.gene76734.t1;Parent=MS.gene76734.t1 |
| Gene Sequence |
| Protein sequence |
