Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94447.t1 | XP_003613712.1 | 95.5 | 732 | 33 | 0 | 1 | 732 | 1 | 732 | 0.00E+00 | 1379.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94447.t1 | Q9ZVH4 | 74.2 | 732 | 189 | 0 | 1 | 732 | 1 | 732 | 0.0e+00 | 1114.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94447.t1 | G7KDU2 | 95.5 | 732 | 33 | 0 | 1 | 732 | 1 | 732 | 0.0e+00 | 1379.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene94447 | 0.858136 | 1.01E-62 | -1.69E-46 |
| MS.gene04918 | MS.gene94447 | 0.826003 | 3.44E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene94447 | 0.857737 | 1.33E-62 | -1.69E-46 |
| MS.gene049368 | MS.gene94447 | 0.860335 | 2.22E-63 | -1.69E-46 |
| MS.gene049711 | MS.gene94447 | 0.819497 | 1.13E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene94447 | 0.819178 | 1.33E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene94447 | 0.815014 | 1.15E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene94447 | 0.84567 | 3.51E-59 | -1.69E-46 |
| MS.gene049983 | MS.gene94447 | 0.817716 | 2.85E-52 | -1.69E-46 |
| MS.gene050551 | MS.gene94447 | 0.813726 | 2.21E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene94447 | 0.813591 | 2.37E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene94447 | 0.820067 | 8.34E-53 | -1.69E-46 |
| MS.gene050901 | MS.gene94447 | 0.820298 | 7.38E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene94447 | 0.816504 | 5.34E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene94447 | 0.833822 | 4.28E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene94447 | 0.806644 | 7.44E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene94447 | 0.800297 | 1.54E-48 | -1.69E-46 |
| MS.gene05157 | MS.gene94447 | 0.804628 | 1.97E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene94447 | 0.834192 | 3.46E-56 | -1.69E-46 |
| MS.gene051719 | MS.gene94447 | 0.816915 | 4.32E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene94447 | 0.832944 | 7.08E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene94447 | 0.812187 | 4.81E-51 | -1.69E-46 |
| MS.gene052016 | MS.gene94447 | 0.820275 | 7.47E-53 | -1.69E-46 |
| MS.gene052133 | MS.gene94447 | 0.802718 | 4.91E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene94447 | 0.819818 | 9.51E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene94447 | 0.825679 | 4.11E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene94447 | 0.839063 | 1.98E-57 | -1.69E-46 |
| MS.gene052519 | MS.gene94447 | 0.803529 | 3.34E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene94447 | 0.806468 | 8.11E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene94447 | 0.819736 | 9.93E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene94447 | 0.823653 | 1.23E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene94447 | 0.839756 | 1.31E-57 | -1.69E-46 |
| MS.gene053143 | MS.gene94447 | 0.815692 | 8.12E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene94447 | 0.828828 | 7.24E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene94447 | 0.853374 | 2.49E-61 | -1.69E-46 |
| MS.gene053581 | MS.gene94447 | 0.838876 | 2.22E-57 | -1.69E-46 |
| MS.gene05364 | MS.gene94447 | 0.821077 | 4.89E-53 | -1.69E-46 |
| MS.gene054142 | MS.gene94447 | 0.809808 | 1.58E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene94447 | 0.812649 | 3.81E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene94447 | 0.827905 | 1.21E-54 | -1.69E-46 |
| MS.gene05458 | MS.gene94447 | 0.846157 | 2.59E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene94447 | 0.821347 | 4.24E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene94447 | 0.801948 | 7.08E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene94447 | 0.851633 | 7.82E-61 | -1.69E-46 |
| MS.gene055466 | MS.gene94447 | 0.859679 | 3.50E-63 | -1.69E-46 |
| MS.gene055468 | MS.gene94447 | 0.859549 | 3.83E-63 | -1.69E-46 |
| MS.gene055469 | MS.gene94447 | 0.838294 | 3.13E-57 | -1.69E-46 |
| MS.gene055513 | MS.gene94447 | 0.85483 | 9.48E-62 | -1.69E-46 |
| MS.gene055537 | MS.gene94447 | 0.808017 | 3.81E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene94447 | -0.842377 | 2.68E-58 | -1.69E-46 |
| MS.gene056043 | MS.gene94447 | -0.835935 | 1.26E-56 | -1.69E-46 |
| MS.gene056174 | MS.gene94447 | 0.800807 | 1.21E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene94447 | 0.802082 | 6.64E-49 | -1.69E-46 |
| MS.gene056215 | MS.gene94447 | 0.811132 | 8.16E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene94447 | 0.8651 | 7.54E-65 | -1.69E-46 |
| MS.gene056507 | MS.gene94447 | 0.820966 | 5.19E-53 | -1.69E-46 |
| MS.gene056595 | MS.gene94447 | 0.801595 | 8.36E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene94447 | 0.814674 | 1.37E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene94447 | 0.809189 | 2.14E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene94447 | 0.833115 | 6.42E-56 | -1.69E-46 |
| MS.gene057294 | MS.gene94447 | 0.852773 | 3.71E-61 | -1.69E-46 |
| MS.gene057890 | MS.gene94447 | -0.806346 | 8.60E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene94447 | 0.822917 | 1.83E-53 | -1.69E-46 |
| MS.gene058330 | MS.gene94447 | 0.819547 | 1.10E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene94447 | 0.81068 | 1.02E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene94447 | 0.820629 | 6.20E-53 | -1.69E-46 |
| MS.gene058852 | MS.gene94447 | 0.809467 | 1.87E-50 | -1.69E-46 |
| MS.gene05894 | MS.gene94447 | 0.800941 | 1.14E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene94447 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene059170 | MS.gene94447 | 0.82699 | 2.00E-54 | -1.69E-46 |
| MS.gene059227 | MS.gene94447 | 0.803222 | 3.86E-49 | -1.69E-46 |
| MS.gene059570 | MS.gene94447 | 0.801891 | 7.27E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene94447 | 0.827102 | 1.88E-54 | -1.69E-46 |
| MS.gene059778 | MS.gene94447 | 0.834908 | 2.28E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene94447 | 0.82134 | 4.25E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene94447 | 0.809095 | 2.24E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene94447 | 0.812728 | 3.66E-51 | -1.69E-46 |
| MS.gene060519 | MS.gene94447 | 0.806357 | 8.55E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene94447 | 0.828586 | 8.28E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene94447 | 0.808086 | 3.68E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene94447 | 0.809174 | 2.16E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene94447 | 0.806722 | 7.17E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene94447 | 0.86412 | 1.53E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94447.t1 | MTR_5g039880 | 95.492 | 732 | 33 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1449 |
| MS.gene94447.t1 | MTR_7g039690 | 92.077 | 732 | 34 | 1 | 1 | 732 | 1 | 708 | 0.0 | 1385 |
| MS.gene94447.t1 | MTR_8g056030 | 80.874 | 732 | 139 | 1 | 1 | 732 | 1 | 731 | 0.0 | 1241 |
| MS.gene94447.t1 | MTR_7g039660 | 75.000 | 732 | 171 | 3 | 1 | 732 | 1 | 720 | 0.0 | 1113 |
| MS.gene94447.t1 | MTR_6g011700 | 68.544 | 728 | 205 | 1 | 5 | 732 | 2 | 705 | 0.0 | 1047 |
| MS.gene94447.t1 | MTR_6g011770 | 66.071 | 728 | 223 | 1 | 5 | 732 | 2 | 705 | 0.0 | 998 |
| MS.gene94447.t1 | MTR_1g040925 | 76.589 | 598 | 122 | 2 | 137 | 732 | 360 | 941 | 0.0 | 932 |
| MS.gene94447.t1 | MTR_1g040925 | 72.384 | 344 | 91 | 2 | 11 | 353 | 19 | 359 | 1.03e-165 | 502 |
| MS.gene94447.t1 | MTR_1g040995 | 78.736 | 522 | 109 | 1 | 137 | 656 | 360 | 881 | 0.0 | 844 |
| MS.gene94447.t1 | MTR_1g040995 | 72.384 | 344 | 91 | 2 | 11 | 353 | 19 | 359 | 4.25e-166 | 501 |
| MS.gene94447.t1 | MTR_7g039790 | 52.817 | 710 | 305 | 7 | 28 | 732 | 33 | 717 | 0.0 | 727 |
| MS.gene94447.t1 | MTR_5g039770 | 53.835 | 678 | 285 | 6 | 59 | 732 | 1 | 654 | 0.0 | 712 |
| MS.gene94447.t1 | MTR_7g445240 | 51.412 | 708 | 302 | 7 | 28 | 732 | 33 | 701 | 0.0 | 695 |
| MS.gene94447.t1 | MTR_5g040040 | 62.264 | 530 | 93 | 6 | 203 | 732 | 164 | 586 | 0.0 | 617 |
| MS.gene94447.t1 | MTR_5g039890 | 65.727 | 461 | 113 | 2 | 6 | 421 | 3 | 463 | 0.0 | 593 |
| MS.gene94447.t1 | MTR_2g019260 | 41.201 | 716 | 400 | 12 | 24 | 732 | 91 | 792 | 7.24e-172 | 513 |
| MS.gene94447.t1 | MTR_7g039680 | 66.489 | 376 | 102 | 3 | 6 | 380 | 3 | 355 | 3.25e-169 | 490 |
| MS.gene94447.t1 | MTR_2g019260 | 40.497 | 684 | 387 | 12 | 24 | 700 | 91 | 761 | 1.49e-158 | 478 |
| MS.gene94447.t1 | MTR_5g040180 | 65.449 | 356 | 120 | 2 | 18 | 371 | 5 | 359 | 5.14e-158 | 462 |
| MS.gene94447.t1 | MTR_7g039430 | 64.431 | 343 | 116 | 3 | 18 | 358 | 5 | 343 | 2.56e-144 | 426 |
| MS.gene94447.t1 | MTR_5g040190 | 62.099 | 343 | 124 | 3 | 18 | 358 | 5 | 343 | 2.51e-138 | 411 |
| MS.gene94447.t1 | MTR_7g039440 | 65.541 | 296 | 101 | 1 | 76 | 371 | 1 | 295 | 3.54e-130 | 388 |
| MS.gene94447.t1 | MTR_7g108340 | 33.826 | 745 | 437 | 16 | 26 | 732 | 9 | 735 | 3.14e-125 | 390 |
| MS.gene94447.t1 | MTR_2g437390 | 34.153 | 732 | 439 | 15 | 32 | 732 | 23 | 742 | 8.05e-125 | 389 |
| MS.gene94447.t1 | MTR_4g119413 | 33.653 | 731 | 444 | 14 | 32 | 732 | 25 | 744 | 7.61e-121 | 379 |
| MS.gene94447.t1 | MTR_1g040965 | 79.358 | 218 | 45 | 0 | 515 | 732 | 1 | 218 | 2.70e-120 | 359 |
| MS.gene94447.t1 | MTR_7g039380 | 64.151 | 212 | 67 | 2 | 8 | 217 | 2 | 206 | 1.74e-85 | 269 |
| MS.gene94447.t1 | MTR_4g119413 | 31.746 | 567 | 352 | 12 | 32 | 568 | 25 | 586 | 7.42e-82 | 273 |
| MS.gene94447.t1 | MTR_5g040230 | 70.732 | 164 | 48 | 0 | 54 | 217 | 104 | 267 | 1.67e-73 | 239 |
| MS.gene94447.t1 | MTR_5g039820 | 42.683 | 164 | 54 | 2 | 569 | 732 | 1 | 124 | 5.98e-32 | 120 |
| MS.gene94447.t1 | MTR_7g039770 | 61.957 | 92 | 35 | 0 | 641 | 732 | 105 | 196 | 7.61e-32 | 123 |
| MS.gene94447.t1 | MTR_7g039770 | 54.717 | 106 | 46 | 1 | 464 | 567 | 1 | 106 | 1.75e-31 | 122 |
| MS.gene94447.t1 | MTR_7g445230 | 61.957 | 92 | 35 | 0 | 641 | 732 | 105 | 196 | 7.61e-32 | 123 |
| MS.gene94447.t1 | MTR_7g445230 | 54.717 | 106 | 46 | 1 | 464 | 567 | 1 | 106 | 1.75e-31 | 122 |
| MS.gene94447.t1 | MTR_1g099430 | 40.000 | 115 | 31 | 2 | 618 | 732 | 19 | 95 | 1.37e-16 | 79.3 |
| MS.gene94447.t1 | MTR_5g036450 | 54.717 | 53 | 22 | 1 | 1 | 53 | 1 | 51 | 4.68e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94447.t1 | AT1G26830 | 74.180 | 732 | 189 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1165 |
| MS.gene94447.t1 | AT1G69670 | 72.268 | 732 | 203 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1137 |
| MS.gene94447.t1 | AT1G69670 | 72.268 | 732 | 203 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1137 |
| MS.gene94447.t1 | AT5G46210 | 40.460 | 739 | 418 | 13 | 1 | 732 | 69 | 792 | 3.46e-165 | 496 |
| MS.gene94447.t1 | AT4G02570 | 34.177 | 711 | 424 | 13 | 52 | 732 | 42 | 738 | 3.53e-125 | 390 |
| MS.gene94447.t1 | AT4G02570 | 34.177 | 711 | 424 | 13 | 52 | 732 | 42 | 738 | 3.53e-125 | 390 |
| MS.gene94447.t1 | AT4G02570 | 34.177 | 711 | 424 | 13 | 52 | 732 | 42 | 738 | 3.53e-125 | 390 |
| MS.gene94447.t1 | AT4G02570 | 34.177 | 711 | 424 | 13 | 52 | 732 | 42 | 738 | 3.53e-125 | 390 |
| MS.gene94447.t1 | AT1G02980 | 31.888 | 715 | 440 | 14 | 51 | 732 | 42 | 742 | 3.84e-108 | 346 |
| MS.gene94447.t1 | AT1G02980 | 31.888 | 715 | 440 | 14 | 51 | 732 | 42 | 742 | 3.84e-108 | 346 |
| MS.gene94447.t1 | AT1G43140 | 32.528 | 704 | 419 | 15 | 52 | 732 | 51 | 721 | 3.70e-101 | 327 |
| MS.gene94447.t1 | AT1G59790 | 26.829 | 328 | 216 | 9 | 52 | 366 | 48 | 364 | 2.90e-26 | 111 |
| MS.gene94447.t1 | AT1G59790 | 26.398 | 322 | 213 | 9 | 51 | 359 | 47 | 357 | 2.01e-24 | 106 |
| MS.gene94447.t1 | AT1G59800 | 25.490 | 204 | 146 | 3 | 52 | 251 | 43 | 244 | 1.13e-17 | 84.0 |
| MS.gene94447.t1 | AT4G12100 | 22.253 | 364 | 237 | 11 | 24 | 368 | 76 | 412 | 1.27e-16 | 83.6 |
Find 159 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTAGGTCCTTCTGTTTA+TGG | 0.117167 | 5.1:+30016453 | MS.gene94447:CDS |
| ACAGGATCCTTCAACCTTTC+AGG | 0.147657 | 5.1:-30016864 | None:intergenic |
| AATATGGTTCTTCACAAATT+TGG | 0.179774 | 5.1:+30016069 | MS.gene94447:CDS |
| CACTCAAGGAAGTTCCTTTC+TGG | 0.187285 | 5.1:+30016164 | MS.gene94447:CDS |
| TTTATTGAGTGCTGTGGTTC+TGG | 0.191669 | 5.1:+30016540 | MS.gene94447:CDS |
| TCGACTGTTGAATATGCTTT+TGG | 0.245448 | 5.1:+30016356 | MS.gene94447:CDS |
| ATTGACGTGGCAAACTAATA+TGG | 0.248034 | 5.1:+30017499 | MS.gene94447:CDS |
| ACGTCAATTTCCTGCCATTA+TGG | 0.248558 | 5.1:-30017484 | None:intergenic |
| ATTCAACAAGATTATAGATT+TGG | 0.266006 | 5.1:+30016923 | MS.gene94447:CDS |
| TTAATCTATAAGGAGTCTTC+TGG | 0.270183 | 5.1:+30016696 | MS.gene94447:CDS |
| TTAGCTTTGAAGAGCTTTAC+AGG | 0.270979 | 5.1:+30013448 | MS.gene94447:CDS |
| TGATGATAAATATGAAGATT+TGG | 0.279943 | 5.1:+30016737 | MS.gene94447:CDS |
| TCACTATTGCTGCTTCAATC+TGG | 0.281451 | 5.1:-30017892 | None:intergenic |
| GTTGTGCTCAAGTTGCTTCC+TGG | 0.283417 | 5.1:-30017927 | None:intergenic |
| CACTATTGCTGCTTCAATCT+GGG | 0.291769 | 5.1:-30017891 | None:intergenic |
| CAGCACTTTGCGAGAAATTT+CGG | 0.292111 | 5.1:+30017444 | MS.gene94447:CDS |
| GCAGACTTAAAAGCTACTTT+TGG | 0.295841 | 5.1:+30017527 | MS.gene94447:CDS |
| TTCTTTACATCCGTTGGATT+TGG | 0.302500 | 5.1:-30017995 | None:intergenic |
| GCAATCATTGGCTTTGGTTA+AGG | 0.303138 | 5.1:+30017688 | MS.gene94447:CDS |
| TCAACAGTCGAGTCCTTATC+TGG | 0.305371 | 5.1:-30016344 | None:intergenic |
| CGTCAATTTCCTGCCATTAT+GGG | 0.309194 | 5.1:-30017483 | None:intergenic |
| GGAATCGGAACTGGAGAAAC+TGG | 0.315369 | 5.1:+30017835 | MS.gene94447:CDS |
| ACAAAGATGCTAATGGATTT+AGG | 0.324791 | 5.1:+30016438 | MS.gene94447:CDS |
| CCAATTTACCGCAAAATTAG+AGG | 0.325857 | 5.1:+30017262 | MS.gene94447:CDS |
| ATGAGGAATTCAGATCTTTC+AGG | 0.328092 | 5.1:-30016968 | None:intergenic |
| GTAATCTTCGTTTCAGTTCC+AGG | 0.340515 | 5.1:-30016630 | None:intergenic |
| GGTTCTATTCCGGTATTTGC+AGG | 0.345096 | 5.1:+30017118 | MS.gene94447:CDS |
| TGATAAAACTTGGATCATTC+TGG | 0.345686 | 5.1:+30013383 | MS.gene94447:CDS |
| ATTTAGGTCCTTCTGTTTAT+GGG | 0.347103 | 5.1:+30016454 | MS.gene94447:CDS |
| CAATCATTGGCTTTGGTTAA+GGG | 0.347835 | 5.1:+30017689 | MS.gene94447:CDS |
| AAGCTTCAACTGAGTTCTAT+AGG | 0.353571 | 5.1:+30016502 | MS.gene94447:CDS |
| CATGCTTAGATTAATCTATA+AGG | 0.358765 | 5.1:+30016686 | MS.gene94447:CDS |
| ACAAGGTTATGGTTCTATTC+CGG | 0.358842 | 5.1:+30017108 | MS.gene94447:CDS |
| CGCGAAAATTCCTCTTCCTT+GGG | 0.361595 | 5.1:-30013317 | None:intergenic |
| ACGCGAAAATTCCTCTTCCT+TGG | 0.366742 | 5.1:-30013318 | None:intergenic |
| GATTACCCTTGACAAGGTTA+TGG | 0.368294 | 5.1:+30017097 | MS.gene94447:CDS |
| TGGAAGAATTAAACAGAAAG+TGG | 0.370300 | 5.1:+30016184 | MS.gene94447:CDS |
| GATGATAAATATGAAGATTT+GGG | 0.381206 | 5.1:+30016738 | MS.gene94447:CDS |
| TCAGTTGAAGCTTGCAGAAA+AGG | 0.388471 | 5.1:-30016492 | None:intergenic |
| TTATTGAGTGCTGTGGTTCT+GGG | 0.394402 | 5.1:+30016541 | MS.gene94447:CDS |
| GTGCCTGCAATCATTGGCTT+TGG | 0.396338 | 5.1:+30017682 | MS.gene94447:CDS |
| ACTGTGCAGGTTCTGACAAC+AGG | 0.396783 | 5.1:+30017371 | MS.gene94447:CDS |
| AATGCCGACCACCCTGAGTT+AGG | 0.401152 | 5.1:+30017332 | MS.gene94447:CDS |
| ATCCGTTTCTTTACATCCGT+TGG | 0.402613 | 5.1:-30018001 | None:intergenic |
| CGAGGTATGGTGATAAAACT+TGG | 0.413055 | 5.1:+30013373 | MS.gene94447:CDS |
| ACTTGAGCACAACAATCTTA+TGG | 0.413342 | 5.1:+30017937 | MS.gene94447:CDS |
| GAAGAGGTGCCTGCAATCAT+TGG | 0.418942 | 5.1:+30017676 | MS.gene94447:CDS |
| AGGAACTGTTGTTGCACAAA+AGG | 0.420428 | 5.1:+30017814 | MS.gene94447:CDS |
| TAACCAAAGCCAATGATTGC+AGG | 0.428278 | 5.1:-30017685 | None:intergenic |
| AAAACAACTGTTTATGAACT+TGG | 0.428702 | 5.1:+30016285 | MS.gene94447:CDS |
| AAGTATAACAAAGATGCTAA+TGG | 0.442676 | 5.1:+30016431 | MS.gene94447:CDS |
| AGCTTCAACTGAGTTCTATA+GGG | 0.452068 | 5.1:+30016503 | MS.gene94447:CDS |
| TCTGTTTAATTCTTCCAGAA+AGG | 0.455958 | 5.1:-30016178 | None:intergenic |
| AGCCTCTGCACAAATTCAAC+AGG | 0.456083 | 5.1:-30016882 | None:intergenic |
| GTGAAATGTACTCTGGAATA+CGG | 0.457810 | 5.1:-30017016 | None:intergenic |
| TGCACAAAAGGAATCGGAAC+TGG | 0.458457 | 5.1:+30017826 | MS.gene94447:CDS |
| CATGAGTACACACATTTGAT+AGG | 0.461173 | 5.1:-30017582 | None:intergenic |
| ATATAGGAATGCTTACAATA+TGG | 0.464480 | 5.1:+30016053 | MS.gene94447:intron |
| TTCTTCATTCAAACCAGATA+AGG | 0.468077 | 5.1:+30016331 | MS.gene94447:CDS |
| AAGCTTCGAAAAGGTCTAAA+GGG | 0.471351 | 5.1:+30017053 | MS.gene94447:CDS |
| TACTGATCCTGAAAGGTTGA+AGG | 0.474245 | 5.1:+30016857 | MS.gene94447:CDS |
| TAATCTATAAGGAGTCTTCT+GGG | 0.474589 | 5.1:+30016697 | MS.gene94447:CDS |
| TGATAGAGTGAGCCACTACT+TGG | 0.476648 | 5.1:+30016605 | MS.gene94447:CDS |
| CAACAGATCTAGCCATCTCT+TGG | 0.478016 | 5.1:-30016137 | None:intergenic |
| TGAAATGTACTCTGGAATAC+GGG | 0.483088 | 5.1:-30017015 | None:intergenic |
| AAAGTGGGATGACCACAATA+AGG | 0.483530 | 5.1:+30016200 | MS.gene94447:CDS |
| CACCTCTTCAAATCTGATGC+TGG | 0.488180 | 5.1:-30017662 | None:intergenic |
| TTGACGTGGCAAACTAATAT+GGG | 0.489497 | 5.1:+30017500 | MS.gene94447:CDS |
| TACCCACAGGCTCCTTCCTA+AGG | 0.495503 | 5.1:-30017721 | None:intergenic |
| GTAGGACCATCGCCTAACTC+AGG | 0.500013 | 5.1:-30017344 | None:intergenic |
| CAGAAAGGAACTTCCTTGAG+TGG | 0.500983 | 5.1:-30016163 | None:intergenic |
| TTAAGGGAAGAAATGTCCTT+AGG | 0.501041 | 5.1:+30017705 | MS.gene94447:CDS |
| ACACATTCTATGTTAATGAC+AGG | 0.505783 | 5.1:+30017762 | MS.gene94447:CDS |
| TAAGCTTCGAAAAGGTCTAA+AGG | 0.508584 | 5.1:+30017052 | MS.gene94447:CDS |
| CAGTTCCAGGGTCCAAGTAG+TGG | 0.509512 | 5.1:-30016617 | None:intergenic |
| TAGTGAGGATTATGAAATCC+AGG | 0.510423 | 5.1:+30017909 | MS.gene94447:CDS |
| TATTACCTCAGCACCCATAA+TGG | 0.510591 | 5.1:+30017470 | MS.gene94447:CDS |
| AGGTTCTGACAACAGGGTCT+TGG | 0.511218 | 5.1:+30017378 | MS.gene94447:CDS |
| GGCTGAGATGCGTCTGAATG+AGG | 0.515956 | 5.1:+30016578 | MS.gene94447:CDS |
| GATTACTACTCTGGTGGAGA+AGG | 0.517289 | 5.1:+30016647 | MS.gene94447:CDS |
| TAATCTTCGTTTCAGTTCCA+GGG | 0.519743 | 5.1:-30016629 | None:intergenic |
| TGTTGTTGCACAAAAGGAAT+CGG | 0.522411 | 5.1:+30017820 | MS.gene94447:CDS |
| AGATGAGTAACCCAAGGAAG+AGG | 0.525328 | 5.1:+30013307 | None:intergenic |
| CAGACAAAAGCCGCTTTGCA+AGG | 0.528971 | 5.1:-30017175 | None:intergenic |
| ATCCAACGGATGTAAAGAAA+CGG | 0.530115 | 5.1:+30017999 | MS.gene94447:CDS |
| ACTATTGCTGCTTCAATCTG+GGG | 0.530507 | 5.1:-30017890 | None:intergenic |
| ACCGGCGAAGTTGTTAATAG+AGG | 0.533572 | 5.1:+30016399 | MS.gene94447:CDS |
| AGGTCTAAAGGGAGTTAGTG+AGG | 0.534609 | 5.1:+30017064 | MS.gene94447:CDS |
| CAGATATTTATTGAGTGCTG+TGG | 0.538710 | 5.1:+30016534 | MS.gene94447:CDS |
| TTACATCCGTTGGATTTGGA+AGG | 0.539177 | 5.1:-30017991 | None:intergenic |
| TTTAGGTCCTTCTGTTTATG+GGG | 0.542075 | 5.1:+30016455 | MS.gene94447:CDS |
| ACAAAGAGTGAAATGTACTC+TGG | 0.543670 | 5.1:-30017023 | None:intergenic |
| ACCTCAGCACCCATAATGGC+AGG | 0.544192 | 5.1:+30017474 | MS.gene94447:CDS |
| AACTTGTTCAGTCGTGTCAC+CGG | 0.544635 | 5.1:+30016771 | MS.gene94447:CDS |
| GTGAGCCACTACTTGGACCC+TGG | 0.545452 | 5.1:+30016612 | MS.gene94447:CDS |
| CGAGAGGCTATACTCTGGGC+TGG | 0.546564 | 5.1:+30016092 | MS.gene94447:CDS |
| GTAGACGATAAGCTTCGAAA+AGG | 0.549522 | 5.1:+30017044 | MS.gene94447:CDS |
| GATTGAGTCTCTCCTTGAGC+GGG | 0.549775 | 5.1:+30018021 | MS.gene94447:CDS |
| ACATTCTGATGTACATGGAC+AGG | 0.551895 | 5.1:+30016241 | MS.gene94447:CDS |
| TGAAACGAAGATTACTACTC+TGG | 0.553950 | 5.1:+30016638 | MS.gene94447:CDS |
| ATTTATGATCATAATGCTAG+TGG | 0.555562 | 5.1:+30013423 | MS.gene94447:CDS |
| TTCCAGCATCAGATTTGAAG+AGG | 0.558511 | 5.1:+30017660 | MS.gene94447:CDS |
| TCCTGCCATTATGGGTGCTG+AGG | 0.559850 | 5.1:-30017475 | None:intergenic |
| GTGCTGACATTTCTGTCGGA+AGG | 0.563439 | 5.1:-30017427 | None:intergenic |
| CAATTTACCGCAAAATTAGA+GGG | 0.563610 | 5.1:+30017263 | MS.gene94447:CDS |
| TGGTCCTACACTAACTGTGC+AGG | 0.566945 | 5.1:+30017358 | MS.gene94447:CDS |
| TCATTTGTAATGCCTTATTG+TGG | 0.567815 | 5.1:-30016212 | None:intergenic |
| CTCTTGGAGATGAGAAGTCA+TGG | 0.572652 | 5.1:-30016121 | None:intergenic |
| TGCTGATAGACTAAGCTACA+AGG | 0.574564 | 5.1:+30017616 | MS.gene94447:CDS |
| TCCTCTATTAACAACTTCGC+CGG | 0.574652 | 5.1:-30016400 | None:intergenic |
| TGTCCTTAGGAAGGAGCCTG+TGG | 0.575541 | 5.1:+30017718 | MS.gene94447:CDS |
| GACCACCCTGAGTTAGGCGA+TGG | 0.575850 | 5.1:+30017338 | MS.gene94447:CDS |
| GACTTCTCATCTCCAAGAGA+TGG | 0.576415 | 5.1:+30016125 | MS.gene94447:CDS |
| CAAAGTGCTGACATTTCTGT+CGG | 0.576497 | 5.1:-30017431 | None:intergenic |
| TATTGAGTGCTGTGGTTCTG+GGG | 0.577754 | 5.1:+30016542 | MS.gene94447:CDS |
| GGGAAGAAATGTCCTTAGGA+AGG | 0.582948 | 5.1:+30017709 | MS.gene94447:CDS |
| TTCTTCACAAATTTGGCGAG+AGG | 0.583661 | 5.1:+30016076 | MS.gene94447:CDS |
| TTGGCGAGAGGCTATACTCT+GGG | 0.583670 | 5.1:+30016088 | MS.gene94447:CDS |
| GGAAGAATTAAACAGAAAGT+GGG | 0.584845 | 5.1:+30016185 | MS.gene94447:CDS |
| TTTGGCGAGAGGCTATACTC+TGG | 0.586097 | 5.1:+30016087 | MS.gene94447:CDS |
| ATAAATATGAAGATTTGGGT+AGG | 0.586773 | 5.1:+30016742 | MS.gene94447:CDS |
| TAGAGACATTCTGATGTACA+TGG | 0.588793 | 5.1:+30016236 | MS.gene94447:CDS |
| AGATCTGTTGAAGCCACTCA+AGG | 0.592937 | 5.1:+30016150 | MS.gene94447:CDS |
| AGAAGAAGATGAGTAACCCA+AGG | 0.593480 | 5.1:+30013301 | None:intergenic |
| ATCGCCTAACTCAGGGTGGT+CGG | 0.593707 | 5.1:-30017336 | None:intergenic |
| ACTTCATACGTCAAAGACTA+CGG | 0.595144 | 5.1:+30016822 | MS.gene94447:CDS |
| GCACAACAATCTTATGGCTG+AGG | 0.595338 | 5.1:+30017943 | MS.gene94447:CDS |
| ATGAACTTGGTCAGAACCTG+TGG | 0.595675 | 5.1:+30016298 | MS.gene94447:CDS |
| TTCTGGGGATTATCTCAAGA+AGG | 0.597654 | 5.1:+30016557 | MS.gene94447:CDS |
| GTTGTAATGGATCCGAGGTA+TGG | 0.601802 | 5.1:+30013360 | MS.gene94447:CDS |
| AGCTTGTTACTGATCCTGAA+AGG | 0.602699 | 5.1:+30016850 | MS.gene94447:CDS |
| ATAGAACCATAACCTTGTCA+AGG | 0.604566 | 5.1:-30017103 | None:intergenic |
| AATTCTTCCCCATAAACAGA+AGG | 0.608454 | 5.1:-30016462 | None:intergenic |
| AACGAAGATTACTACTCTGG+TGG | 0.609690 | 5.1:+30016641 | MS.gene94447:CDS |
| TGCAGAGATTACCCTTGACA+AGG | 0.610325 | 5.1:+30017091 | MS.gene94447:CDS |
| TCGCAAACATCTTTACCCAC+AGG | 0.610963 | 5.1:-30017734 | None:intergenic |
| TTAGTACACAGTGAGCGTAC+CGG | 0.613443 | 5.1:+30016381 | MS.gene94447:CDS |
| TACTCTGGTGGAGAAGGAGA+TGG | 0.615285 | 5.1:+30016653 | MS.gene94447:CDS |
| TAGAACCATAACCTTGTCAA+GGG | 0.616816 | 5.1:-30017102 | None:intergenic |
| CATGTCACACTAGATTGAGC+TGG | 0.619728 | 5.1:-30017401 | None:intergenic |
| GTTAAGCTGAAGACAGAATG+TGG | 0.624729 | 5.1:+30017236 | MS.gene94447:CDS |
| GAGTACACACATTTGATAGG+TGG | 0.629808 | 5.1:-30017579 | None:intergenic |
| ACAAGCAGCACCTTGCAAAG+CGG | 0.644467 | 5.1:+30017165 | MS.gene94447:CDS |
| TTGTTCAGTCGTGTCACCGG+TGG | 0.648925 | 5.1:+30016774 | MS.gene94447:CDS |
| TAGGACCATCGCCTAACTCA+GGG | 0.650482 | 5.1:-30017343 | None:intergenic |
| GGATTGAGTCTCTCCTTGAG+CGG | 0.650864 | 5.1:+30018020 | MS.gene94447:CDS |
| ATCCTGTTGAATTTGTGCAG+AGG | 0.652724 | 5.1:+30016880 | MS.gene94447:CDS |
| GCGATTCCTTCCAAATCCAA+CGG | 0.655030 | 5.1:+30017985 | MS.gene94447:CDS |
| CTGTGCAGGTTCTGACAACA+GGG | 0.655678 | 5.1:+30017372 | MS.gene94447:CDS |
| GTCCTTAGGAAGGAGCCTGT+GGG | 0.656948 | 5.1:+30017719 | MS.gene94447:CDS |
| AGAACCTGCACAGTTAGTGT+AGG | 0.658313 | 5.1:-30017362 | None:intergenic |
| CAGTTTCTGATGATGCTGAG+AGG | 0.661049 | 5.1:+30017204 | MS.gene94447:CDS |
| AGATTGAAGCAGCAATAGTG+AGG | 0.663820 | 5.1:+30017894 | MS.gene94447:CDS |
| ATGTGGTTGTAATGGATCCG+AGG | 0.669826 | 5.1:+30013355 | MS.gene94447:CDS |
| GAAATGTACTCTGGAATACG+GGG | 0.691252 | 5.1:-30017014 | None:intergenic |
| GACCATCGCCTAACTCAGGG+TGG | 0.727453 | 5.1:-30017340 | None:intergenic |
| TGTGGGTAAAGATGTTTGCG+AGG | 0.737739 | 5.1:+30017736 | MS.gene94447:CDS |
| ATAATGGCAGGAAATTGACG+TGG | 0.739143 | 5.1:+30017486 | MS.gene94447:CDS |
| TTGGAGATGAGAAGTCATGG+TGG | 0.753515 | 5.1:-30016118 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGATGTAAATTATATTA+TGG | + | chr5.1:30015341-30015360 | MS.gene94447:intron | 10.0% |
| !! | ATTCAAATAAAATTCTAATT+TGG | - | chr5.1:30015406-30015425 | None:intergenic | 10.0% |
| !! | TTCTATAAACTATTAAATAA+AGG | - | chr5.1:30015888-30015907 | None:intergenic | 10.0% |
| !!! | AAAATATTATGTTTAAAACT+CGG | - | chr5.1:30013687-30013706 | None:intergenic | 10.0% |
| !!! | ACTATTTTATTTTCATTATT+AGG | - | chr5.1:30015724-30015743 | None:intergenic | 10.0% |
| !!! | ATTGTTTTATAAGATATATA+GGG | + | chr5.1:30013890-30013909 | MS.gene94447:intron | 10.0% |
| !! | AAAATAATTAAGATGTCATA+TGG | - | chr5.1:30014996-30015015 | None:intergenic | 15.0% |
| !! | AAACTGTATAAGATAAAAAT+AGG | + | chr5.1:30017794-30017813 | MS.gene94447:CDS | 15.0% |
| !! | TACTTTATTGTCTTTATTAT+GGG | + | chr5.1:30015992-30016011 | MS.gene94447:intron | 15.0% |
| !! | TTTAGTCAAATAGAAAATTA+GGG | - | chr5.1:30014376-30014395 | None:intergenic | 15.0% |
| !!! | AGTTAAATTGTTTTCATATA+TGG | - | chr5.1:30014037-30014056 | None:intergenic | 15.0% |
| !!! | CTTGTTTTTAATGATATATA+GGG | + | chr5.1:30013584-30013603 | MS.gene94447:intron | 15.0% |
| !!! | GATTGTTTTATAAGATATAT+AGG | + | chr5.1:30013889-30013908 | MS.gene94447:intron | 15.0% |
| !!! | GTTTTCAAAATATTTTCATA+AGG | + | chr5.1:30014299-30014318 | MS.gene94447:intron | 15.0% |
| !!! | TGAAAATATTTTGAAAACTA+TGG | - | chr5.1:30014297-30014316 | None:intergenic | 15.0% |
| !!! | TGATTTCTATTATTTGTTAT+TGG | + | chr5.1:30013483-30013502 | MS.gene94447:intron | 15.0% |
| !!! | TTGTTTTTAATGATATATAG+GGG | + | chr5.1:30013585-30013604 | MS.gene94447:intron | 15.0% |
| !! | ACATAAAAAAGTTAATTGCT+AGG | - | chr5.1:30015078-30015097 | None:intergenic | 20.0% |
| !! | AGATTTCAAAAAGGAAAATA+GGG | + | chr5.1:30014943-30014962 | MS.gene94447:intron | 20.0% |
| !! | ATTCAACAAGATTATAGATT+TGG | + | chr5.1:30016923-30016942 | MS.gene94447:CDS | 20.0% |
| !! | CTTTAGTCAAATAGAAAATT+AGG | - | chr5.1:30014377-30014396 | None:intergenic | 20.0% |
| !! | GATGATAAATATGAAGATTT+GGG | + | chr5.1:30016738-30016757 | MS.gene94447:CDS | 20.0% |
| !! | GTACTTTATTGTCTTTATTA+TGG | + | chr5.1:30015991-30016010 | MS.gene94447:intron | 20.0% |
| !! | TAAACTATTAAATAAAGGAG+AGG | - | chr5.1:30015883-30015902 | None:intergenic | 20.0% |
| !! | TAGATTTCAAAAAGGAAAAT+AGG | + | chr5.1:30014942-30014961 | MS.gene94447:intron | 20.0% |
| !! | TGATGATAAATATGAAGATT+TGG | + | chr5.1:30016737-30016756 | MS.gene94447:CDS | 20.0% |
| !! | TGTAATTAATACCTGAAATA+TGG | - | chr5.1:30015026-30015045 | None:intergenic | 20.0% |
| !!! | AAAGCAAAAATTTTCAATCT+AGG | + | chr5.1:30014176-30014195 | MS.gene94447:intron | 20.0% |
| !!! | AAGCAAAAATTTTCAATCTA+GGG | + | chr5.1:30014177-30014196 | MS.gene94447:intron | 20.0% |
| !!! | AAGTTGTTTTTATTTGTTGT+TGG | + | chr5.1:30013781-30013800 | MS.gene94447:intron | 20.0% |
| !!! | AGGAAGTATTAAATGTTTTT+AGG | - | chr5.1:30015183-30015202 | None:intergenic | 20.0% |
| !!! | CTTTTAAACCAATAATTAGA+TGG | + | chr5.1:30015798-30015817 | MS.gene94447:intron | 20.0% |
| !!! | GCTTGTTTTTAATGATATAT+AGG | + | chr5.1:30013583-30013602 | MS.gene94447:intron | 20.0% |
| !!! | TATTTTTCATCTTTATCTTG+TGG | + | chr5.1:30016030-30016049 | MS.gene94447:intron | 20.0% |
| !!! | TTGTCATTGGATTTTTTTTA+GGG | + | chr5.1:30014123-30014142 | MS.gene94447:intron | 20.0% |
| !!! | TTTTAAAAACTCCATATTTC+AGG | + | chr5.1:30015012-30015031 | MS.gene94447:intron | 20.0% |
| !!! | TTTTTTAGGGGTTTTTATAA+TGG | + | chr5.1:30014136-30014155 | MS.gene94447:intron | 20.0% |
| ! | AAAACAACTGTTTATGAACT+TGG | + | chr5.1:30016285-30016304 | MS.gene94447:CDS | 25.0% |
| ! | AACTTATGAACAATCGTATA+AGG | - | chr5.1:30013741-30013760 | None:intergenic | 25.0% |
| ! | AAGTATAACAAAGATGCTAA+TGG | + | chr5.1:30016431-30016450 | MS.gene94447:CDS | 25.0% |
| ! | AATATGGTTCTTCACAAATT+TGG | + | chr5.1:30016069-30016088 | MS.gene94447:CDS | 25.0% |
| ! | ATAAATATGAAGATTTGGGT+AGG | + | chr5.1:30016742-30016761 | MS.gene94447:CDS | 25.0% |
| ! | ATAATGTCTATGTGCAAATA+GGG | + | chr5.1:30015505-30015524 | MS.gene94447:intron | 25.0% |
| ! | ATATAGGAATGCTTACAATA+TGG | + | chr5.1:30016053-30016072 | MS.gene94447:intron | 25.0% |
| ! | ATATGTATAGTTAACACAGA+TGG | - | chr5.1:30014838-30014857 | None:intergenic | 25.0% |
| ! | ATCTATGGTATATATCCAAA+CGG | + | chr5.1:30014458-30014477 | MS.gene94447:intron | 25.0% |
| ! | ATTTATGATCATAATGCTAG+TGG | + | chr5.1:30013423-30013442 | MS.gene94447:CDS | 25.0% |
| ! | CATGCTTAGATTAATCTATA+AGG | + | chr5.1:30016686-30016705 | MS.gene94447:CDS | 25.0% |
| ! | GTTAATGAAAAATTCGAATG+AGG | - | chr5.1:30016988-30017007 | None:intergenic | 25.0% |
| ! | TATAATGTCTATGTGCAAAT+AGG | + | chr5.1:30015504-30015523 | MS.gene94447:intron | 25.0% |
| ! | TATGACAATAAGTGATTTGA+AGG | - | chr5.1:30014326-30014345 | None:intergenic | 25.0% |
| ! | TTATGATAAGATGTCATGTT+TGG | + | chr5.1:30014789-30014808 | MS.gene94447:intron | 25.0% |
| !! | GCAATTGAAATGTTTTCTTT+GGG | - | chr5.1:30015479-30015498 | None:intergenic | 25.0% |
| !! | GGTTTTTATAATGGTCAAAT+TGG | + | chr5.1:30014145-30014164 | MS.gene94447:intron | 25.0% |
| !! | TAATATTTTGTGACACTGTT+TGG | + | chr5.1:30013698-30013717 | MS.gene94447:intron | 25.0% |
| !! | TGCAATTGAAATGTTTTCTT+TGG | - | chr5.1:30015480-30015499 | None:intergenic | 25.0% |
| !! | TTGAAAATTTTTGCTTTCCT+AGG | - | chr5.1:30014173-30014192 | None:intergenic | 25.0% |
| !! | TTTATTACTTTGGAGATGTT+TGG | + | chr5.1:30014200-30014219 | MS.gene94447:intron | 25.0% |
| !!! | ATAAACAGTTGTTTTCTTGA+TGG | - | chr5.1:30016280-30016299 | None:intergenic | 25.0% |
| !!! | GTTGTCATTGGATTTTTTTT+AGG | + | chr5.1:30014122-30014141 | MS.gene94447:intron | 25.0% |
| !!! | TGTCATTGGATTTTTTTTAG+GGG | + | chr5.1:30014124-30014143 | MS.gene94447:intron | 25.0% |
| !!! | TTTTATTTGTTGTTGGTTCT+AGG | + | chr5.1:30013788-30013807 | MS.gene94447:intron | 25.0% |
| AAAGGCTGTAGATTTCAAAA+AGG | + | chr5.1:30014934-30014953 | MS.gene94447:intron | 30.0% | |
| AAGCAAATTCTATCGTTCTT+TGG | + | chr5.1:30014647-30014666 | MS.gene94447:intron | 30.0% | |
| ACACATTCTATGTTAATGAC+AGG | + | chr5.1:30017762-30017781 | MS.gene94447:CDS | 30.0% | |
| AGCAAATTCTATCGTTCTTT+GGG | + | chr5.1:30014648-30014667 | MS.gene94447:intron | 30.0% | |
| ATGACAACTAACTACAACTA+TGG | - | chr5.1:30014110-30014129 | None:intergenic | 30.0% | |
| ATTAGAGAAAAGTCGATGTA+AGG | + | chr5.1:30015378-30015397 | MS.gene94447:intron | 30.0% | |
| ATTTAACTGATAAGCACTTG+TGG | + | chr5.1:30014049-30014068 | MS.gene94447:intron | 30.0% | |
| ATTTAGGTCCTTCTGTTTAT+GGG | + | chr5.1:30016454-30016473 | MS.gene94447:CDS | 30.0% | |
| CAATTTACCGCAAAATTAGA+GGG | + | chr5.1:30017263-30017282 | MS.gene94447:CDS | 30.0% | |
| CATCTTTATCTTGTGGATAT+AGG | + | chr5.1:30016037-30016056 | MS.gene94447:intron | 30.0% | |
| GAGCTTATTTGCTTATGTTA+TGG | + | chr5.1:30014225-30014244 | MS.gene94447:intron | 30.0% | |
| GCATATTTGAGCTTATTTAC+TGG | + | chr5.1:30013926-30013945 | MS.gene94447:intron | 30.0% | |
| GCTGTTAAGTTATGAATCTA+TGG | + | chr5.1:30014443-30014462 | MS.gene94447:intron | 30.0% | |
| GGAAGAATTAAACAGAAAGT+GGG | + | chr5.1:30016185-30016204 | MS.gene94447:CDS | 30.0% | |
| TAAGATATATAGGGTCTGAT+TGG | + | chr5.1:30013899-30013918 | MS.gene94447:intron | 30.0% | |
| TAATCTATAAGGAGTCTTCT+GGG | + | chr5.1:30016697-30016716 | MS.gene94447:CDS | 30.0% | |
| TAGTTGTAGTTAGTTGTCAT+TGG | + | chr5.1:30014110-30014129 | MS.gene94447:intron | 30.0% | |
| TATTATGCTGATCAAGTAGA+AGG | + | chr5.1:30015224-30015243 | MS.gene94447:intron | 30.0% | |
| TCACATAAGTTAATGACAGA+AGG | - | chr5.1:30014597-30014616 | None:intergenic | 30.0% | |
| TCTATGGTATATATCCAAAC+GGG | + | chr5.1:30014459-30014478 | MS.gene94447:intron | 30.0% | |
| TCTGTTTAATTCTTCCAGAA+AGG | - | chr5.1:30016181-30016200 | None:intergenic | 30.0% | |
| TGATAAAACTTGGATCATTC+TGG | + | chr5.1:30013383-30013402 | MS.gene94447:CDS | 30.0% | |
| TGCATCTACCATCTAATTAT+TGG | - | chr5.1:30015809-30015828 | None:intergenic | 30.0% | |
| TGCTTTCATATGCACAAATT+TGG | - | chr5.1:30014632-30014651 | None:intergenic | 30.0% | |
| TGGAAGAATTAAACAGAAAG+TGG | + | chr5.1:30016184-30016203 | MS.gene94447:CDS | 30.0% | |
| TTAAATATTGAATGCCAGCT+TGG | - | chr5.1:30015125-30015144 | None:intergenic | 30.0% | |
| TTAATCTATAAGGAGTCTTC+TGG | + | chr5.1:30016696-30016715 | MS.gene94447:CDS | 30.0% | |
| TTCTTCACTCTTATGAACTA+TGG | + | chr5.1:30014743-30014762 | MS.gene94447:intron | 30.0% | |
| TTCTTCATTCAAACCAGATA+AGG | + | chr5.1:30016331-30016350 | MS.gene94447:CDS | 30.0% | |
| ! | AATGATATATAGGGGTTGAT+TGG | + | chr5.1:30013593-30013612 | MS.gene94447:intron | 30.0% |
| ! | ATGTTATTGATAACACTGGT+AGG | + | chr5.1:30015697-30015716 | MS.gene94447:intron | 30.0% |
| ! | CAATCTAGGGTTTATTACTT+TGG | + | chr5.1:30014190-30014209 | MS.gene94447:intron | 30.0% |
| ! | GTGTATTTGAGCTTGTTTAT+TGG | + | chr5.1:30013620-30013639 | MS.gene94447:intron | 30.0% |
| ! | TCATTTGTAATGCCTTATTG+TGG | - | chr5.1:30016215-30016234 | None:intergenic | 30.0% |
| ! | TGTTATTGATAACACTGGTA+GGG | + | chr5.1:30015698-30015717 | MS.gene94447:intron | 30.0% |
| ! | TTTTAAGCATGTGGTTGTAA+TGG | + | chr5.1:30013347-30013366 | MS.gene94447:CDS | 30.0% |
| !! | AAGTTTTGTGATACTGATGT+CGG | + | chr5.1:30013646-30013665 | MS.gene94447:intron | 30.0% |
| !! | ACAAAGATGCTAATGGATTT+AGG | + | chr5.1:30016438-30016457 | MS.gene94447:CDS | 30.0% |
| !! | ATAAGTTTTGTGACACAGTT+TGG | + | chr5.1:30013950-30013969 | MS.gene94447:intron | 30.0% |
| !!! | CAGACTTAAAAGCTACTTTT+GGG | + | chr5.1:30017528-30017547 | MS.gene94447:CDS | 30.0% |
| AAAAAGTTAATTGCTAGGCC+TGG | - | chr5.1:30015073-30015092 | None:intergenic | 35.0% | |
| AAAACTCCAACCAAGAAAAC+AGG | - | chr5.1:30014887-30014906 | None:intergenic | 35.0% | |
| AAACTCCAACCAAGAAAACA+GGG | - | chr5.1:30014886-30014905 | None:intergenic | 35.0% | |
| AAGCTTCAACTGAGTTCTAT+AGG | + | chr5.1:30016502-30016521 | MS.gene94447:CDS | 35.0% | |
| AAGCTTCGAAAAGGTCTAAA+GGG | + | chr5.1:30017053-30017072 | MS.gene94447:CDS | 35.0% | |
| AAGTGACATGATTATGAGTC+AGG | + | chr5.1:30015045-30015064 | MS.gene94447:intron | 35.0% | |
| AATTCTTCCCCATAAACAGA+AGG | - | chr5.1:30016465-30016484 | None:intergenic | 35.0% | |
| ACAAAGAGTGAAATGTACTC+TGG | - | chr5.1:30017026-30017045 | None:intergenic | 35.0% | |
| ACTGGATACTCAACAAAAAG+TGG | + | chr5.1:30017853-30017872 | MS.gene94447:CDS | 35.0% | |
| ACTTCATACGTCAAAGACTA+CGG | + | chr5.1:30016822-30016841 | MS.gene94447:CDS | 35.0% | |
| ACTTGAGCACAACAATCTTA+TGG | + | chr5.1:30017937-30017956 | MS.gene94447:CDS | 35.0% | |
| AGCTTCAACTGAGTTCTATA+GGG | + | chr5.1:30016503-30016522 | MS.gene94447:CDS | 35.0% | |
| ATAGAACCATAACCTTGTCA+AGG | - | chr5.1:30017106-30017125 | None:intergenic | 35.0% | |
| ATCCAACGGATGTAAAGAAA+CGG | + | chr5.1:30017999-30018018 | MS.gene94447:CDS | 35.0% | |
| ATGAGGAATTCAGATCTTTC+AGG | - | chr5.1:30016971-30016990 | None:intergenic | 35.0% | |
| ATTGACGTGGCAAACTAATA+TGG | + | chr5.1:30017499-30017518 | MS.gene94447:CDS | 35.0% | |
| ATTGATACGTGCACATCAAA+TGG | + | chr5.1:30015963-30015982 | MS.gene94447:intron | 35.0% | |
| CATGAGTACACACATTTGAT+AGG | - | chr5.1:30017585-30017604 | None:intergenic | 35.0% | |
| CCAATTTACCGCAAAATTAG+AGG | + | chr5.1:30017262-30017281 | MS.gene94447:CDS | 35.0% | |
| GACACGCATGTCATAATATA+AGG | - | chr5.1:30014708-30014727 | None:intergenic | 35.0% | |
| GAGAGGACAATAATGAAAGT+AGG | - | chr5.1:30015866-30015885 | None:intergenic | 35.0% | |
| GATTTAGGTCCTTCTGTTTA+TGG | + | chr5.1:30016453-30016472 | MS.gene94447:CDS | 35.0% | |
| TAAGCTTCGAAAAGGTCTAA+AGG | + | chr5.1:30017052-30017071 | MS.gene94447:CDS | 35.0% | |
| TAAGTTAATGACAGAAGGCA+AGG | - | chr5.1:30014592-30014611 | None:intergenic | 35.0% | |
| TAATCTTCGTTTCAGTTCCA+GGG | - | chr5.1:30016632-30016651 | None:intergenic | 35.0% | |
| TAGAACCATAACCTTGTCAA+GGG | - | chr5.1:30017105-30017124 | None:intergenic | 35.0% | |
| TAGAGACATTCTGATGTACA+TGG | + | chr5.1:30016236-30016255 | MS.gene94447:CDS | 35.0% | |
| TAGTGAGGATTATGAAATCC+AGG | + | chr5.1:30017909-30017928 | MS.gene94447:CDS | 35.0% | |
| TATATAGGGTCTGATTGGAT+TGG | + | chr5.1:30013904-30013923 | MS.gene94447:intron | 35.0% | |
| TGAAACGAAGATTACTACTC+TGG | + | chr5.1:30016638-30016657 | MS.gene94447:CDS | 35.0% | |
| TGTTGTTGCACAAAAGGAAT+CGG | + | chr5.1:30017820-30017839 | MS.gene94447:CDS | 35.0% | |
| TTAAGGGAAGAAATGTCCTT+AGG | + | chr5.1:30017705-30017724 | MS.gene94447:CDS | 35.0% | |
| TTAGGAATGTTGTGTGAATG+AGG | - | chr5.1:30015165-30015184 | None:intergenic | 35.0% | |
| TTCTTTACATCCGTTGGATT+TGG | - | chr5.1:30017998-30018017 | None:intergenic | 35.0% | |
| TTGACGTGGCAAACTAATAT+GGG | + | chr5.1:30017500-30017519 | MS.gene94447:CDS | 35.0% | |
| TTTAGGTCCTTCTGTTTATG+GGG | + | chr5.1:30016455-30016474 | MS.gene94447:CDS | 35.0% | |
| TTTGATGTGCACGTATCAAT+AGG | - | chr5.1:30015963-30015982 | None:intergenic | 35.0% | |
| ! | AAACATGCCCTCTAATTTTG+CGG | - | chr5.1:30017273-30017292 | None:intergenic | 35.0% |
| ! | ACAAGGTTATGGTTCTATTC+CGG | + | chr5.1:30017108-30017127 | MS.gene94447:CDS | 35.0% |
| ! | CAGATATTTATTGAGTGCTG+TGG | + | chr5.1:30016534-30016553 | MS.gene94447:CDS | 35.0% |
| ! | CATCTTTTTCCTGCAAATAC+CGG | - | chr5.1:30017130-30017149 | None:intergenic | 35.0% |
| ! | CCTCTAATTTTGCGGTAAAT+TGG | - | chr5.1:30017265-30017284 | None:intergenic | 35.0% |
| ! | CTGCATGTTATTGATAACAC+TGG | + | chr5.1:30015693-30015712 | MS.gene94447:intron | 35.0% |
| ! | TATATAGGGGTTGATTGGAT+TGG | + | chr5.1:30013598-30013617 | MS.gene94447:intron | 35.0% |
| ! | TCGACTGTTGAATATGCTTT+TGG | + | chr5.1:30016356-30016375 | MS.gene94447:CDS | 35.0% |
| ! | TTGTTAAGTCCCTGTTTTCT+TGG | + | chr5.1:30014874-30014893 | MS.gene94447:intron | 35.0% |
| !! | CAAGTTTTATCACCATACCT+CGG | - | chr5.1:30013375-30013394 | None:intergenic | 35.0% |
| !! | CAATCATTGGCTTTGGTTAA+GGG | + | chr5.1:30017689-30017708 | MS.gene94447:CDS | 35.0% |
| !! | CAGCACTTTTTAACAACACT+GGG | - | chr5.1:30015537-30015556 | None:intergenic | 35.0% |
| !! | CAGTTGTTTTCTTGATGGTT+TGG | - | chr5.1:30016275-30016294 | None:intergenic | 35.0% |
| !! | GCAGACTTAAAAGCTACTTT+TGG | + | chr5.1:30017527-30017546 | MS.gene94447:CDS | 35.0% |
| !! | GTGAAATGTACTCTGGAATA+CGG | - | chr5.1:30017019-30017038 | None:intergenic | 35.0% |
| !! | TCAGCACTTTTTAACAACAC+TGG | - | chr5.1:30015538-30015557 | None:intergenic | 35.0% |
| !! | TGAAATGTACTCTGGAATAC+GGG | - | chr5.1:30017018-30017037 | None:intergenic | 35.0% |
| !! | TTAGCTTTGAAGAGCTTTAC+AGG | + | chr5.1:30013448-30013467 | MS.gene94447:CDS | 35.0% |
| !!! | TTAAAAGCTACTTTTGGGAG+TGG | + | chr5.1:30017533-30017552 | MS.gene94447:CDS | 35.0% |
| AAAGTGGGATGACCACAATA+AGG | + | chr5.1:30016200-30016219 | MS.gene94447:CDS | 40.0% | |
| AACAAAAAGTGGAGGAGGAT+CGG | + | chr5.1:30017864-30017883 | MS.gene94447:CDS | 40.0% | |
| AACGAAGATTACTACTCTGG+TGG | + | chr5.1:30016641-30016660 | MS.gene94447:CDS | 40.0% | |
| ACATTCTGATGTACATGGAC+AGG | + | chr5.1:30016241-30016260 | MS.gene94447:CDS | 40.0% | |
| ACGTCAATTTCCTGCCATTA+TGG | - | chr5.1:30017487-30017506 | None:intergenic | 40.0% | |
| ACTACAACTATGGCGATGTT+TGG | - | chr5.1:30014100-30014119 | None:intergenic | 40.0% | |
| ACTTCCTACCTTAAGCAACT+GGG | + | chr5.1:30015196-30015215 | MS.gene94447:intron | 40.0% | |
| AGATTGAAGCAGCAATAGTG+AGG | + | chr5.1:30017894-30017913 | MS.gene94447:CDS | 40.0% | |
| AGGAACTGTTGTTGCACAAA+AGG | + | chr5.1:30017814-30017833 | MS.gene94447:CDS | 40.0% | |
| ATAACTCTCCCAGTTGCTTA+AGG | - | chr5.1:30015207-30015226 | None:intergenic | 40.0% | |
| ATAATGGCAGGAAATTGACG+TGG | + | chr5.1:30017486-30017505 | MS.gene94447:CDS | 40.0% | |
| ATCCGTTTCTTTACATCCGT+TGG | - | chr5.1:30018004-30018023 | None:intergenic | 40.0% | |
| ATCCTGTTGAATTTGTGCAG+AGG | + | chr5.1:30016880-30016899 | MS.gene94447:CDS | 40.0% | |
| ATGATTATGAGTCAGGTTCC+AGG | + | chr5.1:30015052-30015071 | MS.gene94447:intron | 40.0% | |
| CAGCACTTTGCGAGAAATTT+CGG | + | chr5.1:30017444-30017463 | MS.gene94447:CDS | 40.0% | |
| CGAGGTATGGTGATAAAACT+TGG | + | chr5.1:30013373-30013392 | MS.gene94447:CDS | 40.0% | |
| CGTATATTTGATTGCCAAGC+TGG | + | chr5.1:30015108-30015127 | MS.gene94447:intron | 40.0% | |
| CGTCAATTTCCTGCCATTAT+GGG | - | chr5.1:30017486-30017505 | None:intergenic | 40.0% | |
| GAGTACACACATTTGATAGG+TGG | - | chr5.1:30017582-30017601 | None:intergenic | 40.0% | |
| GATTACCCTTGACAAGGTTA+TGG | + | chr5.1:30017097-30017116 | MS.gene94447:CDS | 40.0% | |
| GCGAAACTAAGATAGCATCA+CGG | - | chr5.1:30015607-30015626 | None:intergenic | 40.0% | |
| GCTGATCAAGTAGAAGGATA+TGG | + | chr5.1:30015230-30015249 | MS.gene94447:intron | 40.0% | |
| GGATACTCAACAAAAAGTGG+AGG | + | chr5.1:30017856-30017875 | MS.gene94447:CDS | 40.0% | |
| GTAATCTTCGTTTCAGTTCC+AGG | - | chr5.1:30016633-30016652 | None:intergenic | 40.0% | |
| GTAGACGATAAGCTTCGAAA+AGG | + | chr5.1:30017044-30017063 | MS.gene94447:CDS | 40.0% | |
| GTCTATGTGCAAATAGGGTT+AGG | + | chr5.1:30015510-30015529 | MS.gene94447:intron | 40.0% | |
| GTTAAGCTGAAGACAGAATG+TGG | + | chr5.1:30017236-30017255 | MS.gene94447:CDS | 40.0% | |
| TAACCAAAGCCAATGATTGC+AGG | - | chr5.1:30017688-30017707 | None:intergenic | 40.0% | |
| TACTCAACAAAAAGTGGAGG+AGG | + | chr5.1:30017859-30017878 | MS.gene94447:CDS | 40.0% | |
| TACTGATCCTGAAAGGTTGA+AGG | + | chr5.1:30016857-30016876 | MS.gene94447:CDS | 40.0% | |
| TACTTCCTACCTTAAGCAAC+TGG | + | chr5.1:30015195-30015214 | MS.gene94447:intron | 40.0% | |
| TAGTTAACACAGATGGTGAC+TGG | - | chr5.1:30014831-30014850 | None:intergenic | 40.0% | |
| TATTACCTCAGCACCCATAA+TGG | + | chr5.1:30017470-30017489 | MS.gene94447:CDS | 40.0% | |
| TCAGTTGAAGCTTGCAGAAA+AGG | - | chr5.1:30016495-30016514 | None:intergenic | 40.0% | |
| TCCTCTATTAACAACTTCGC+CGG | - | chr5.1:30016403-30016422 | None:intergenic | 40.0% | |
| TGCTGATAGACTAAGCTACA+AGG | + | chr5.1:30017616-30017635 | MS.gene94447:CDS | 40.0% | |
| TTACATCCGTTGGATTTGGA+AGG | - | chr5.1:30017994-30018013 | None:intergenic | 40.0% | |
| TTCCAGCATCAGATTTGAAG+AGG | + | chr5.1:30017660-30017679 | MS.gene94447:CDS | 40.0% | |
| TTCTTCACAAATTTGGCGAG+AGG | + | chr5.1:30016076-30016095 | MS.gene94447:CDS | 40.0% | |
| TTTCCAAAAATTCCCGCTCA+AGG | - | chr5.1:30018036-30018055 | None:intergenic | 40.0% | |
| ! | AAGAGGAATTTTCGCGTTGA+GGG | + | chr5.1:30013324-30013343 | MS.gene94447:CDS | 40.0% |
| ! | ACTATGGTTAGCTGTGTTAG+TGG | + | chr5.1:30014759-30014778 | MS.gene94447:intron | 40.0% |
| ! | ACTATTGCTGCTTCAATCTG+GGG | - | chr5.1:30017893-30017912 | None:intergenic | 40.0% |
| ! | CACTATTGCTGCTTCAATCT+GGG | - | chr5.1:30017894-30017913 | None:intergenic | 40.0% |
| ! | GAAGAACATTTTCTCTCCAC+AGG | - | chr5.1:30016317-30016336 | None:intergenic | 40.0% |
| ! | GTTCTTTGGGTTTACACGTA+GGG | + | chr5.1:30014661-30014680 | MS.gene94447:intron | 40.0% |
| ! | TAAGTCCCTGTTTTCTTGGT+TGG | + | chr5.1:30014878-30014897 | MS.gene94447:intron | 40.0% |
| ! | TAATGGTCAAATTGGTGCCT+AGG | + | chr5.1:30014153-30014172 | MS.gene94447:intron | 40.0% |
| ! | TCACTATTGCTGCTTCAATC+TGG | - | chr5.1:30017895-30017914 | None:intergenic | 40.0% |
| ! | TTATTGAGTGCTGTGGTTCT+GGG | + | chr5.1:30016541-30016560 | MS.gene94447:CDS | 40.0% |
| ! | TTCTGGGGATTATCTCAAGA+AGG | + | chr5.1:30016557-30016576 | MS.gene94447:CDS | 40.0% |
| ! | TTCTTTGGGTTTACACGTAG+GGG | + | chr5.1:30014662-30014681 | MS.gene94447:intron | 40.0% |
| ! | TTTATTGAGTGCTGTGGTTC+TGG | + | chr5.1:30016540-30016559 | MS.gene94447:CDS | 40.0% |
| !! | AGCTTGTTACTGATCCTGAA+AGG | + | chr5.1:30016850-30016869 | MS.gene94447:CDS | 40.0% |
| !! | CAAAGTGCTGACATTTCTGT+CGG | - | chr5.1:30017434-30017453 | None:intergenic | 40.0% |
| !! | GAAATGTACTCTGGAATACG+GGG | - | chr5.1:30017017-30017036 | None:intergenic | 40.0% |
| !! | GCAATCATTGGCTTTGGTTA+AGG | + | chr5.1:30017688-30017707 | MS.gene94447:CDS | 40.0% |
| AAAACTCGGTATCAGACCCA+AGG | - | chr5.1:30013673-30013692 | None:intergenic | 45.0% | |
| ACAGGATCCTTCAACCTTTC+AGG | - | chr5.1:30016867-30016886 | None:intergenic | 45.0% | |
| ACCGGCGAAGTTGTTAATAG+AGG | + | chr5.1:30016399-30016418 | MS.gene94447:CDS | 45.0% | |
| ACGCGAAAATTCCTCTTCCT+TGG | - | chr5.1:30013321-30013340 | None:intergenic | 45.0% | |
| AGAACCTGCACAGTTAGTGT+AGG | - | chr5.1:30017365-30017384 | None:intergenic | 45.0% | |
| AGATCTGTTGAAGCCACTCA+AGG | + | chr5.1:30016150-30016169 | MS.gene94447:CDS | 45.0% | |
| AGCCTCTGCACAAATTCAAC+AGG | - | chr5.1:30016885-30016904 | None:intergenic | 45.0% | |
| AGGTCTAAAGGGAGTTAGTG+AGG | + | chr5.1:30017064-30017083 | MS.gene94447:CDS | 45.0% | |
| ATGAACTTGGTCAGAACCTG+TGG | + | chr5.1:30016298-30016317 | MS.gene94447:CDS | 45.0% | |
| CAACAGATCTAGCCATCTCT+TGG | - | chr5.1:30016140-30016159 | None:intergenic | 45.0% | |
| CACCTCTTCAAATCTGATGC+TGG | - | chr5.1:30017665-30017684 | None:intergenic | 45.0% | |
| CACTCAAGGAAGTTCCTTTC+TGG | + | chr5.1:30016164-30016183 | MS.gene94447:CDS | 45.0% | |
| CAGAAAGGAACTTCCTTGAG+TGG | - | chr5.1:30016166-30016185 | None:intergenic | 45.0% | |
| CATGTCACACTAGATTGAGC+TGG | - | chr5.1:30017404-30017423 | None:intergenic | 45.0% | |
| CGCGAAAATTCCTCTTCCTT+GGG | - | chr5.1:30013320-30013339 | None:intergenic | 45.0% | |
| CTCTTGGAGATGAGAAGTCA+TGG | - | chr5.1:30016124-30016143 | None:intergenic | 45.0% | |
| GACTTCTCATCTCCAAGAGA+TGG | + | chr5.1:30016125-30016144 | MS.gene94447:CDS | 45.0% | |
| GATTACTACTCTGGTGGAGA+AGG | + | chr5.1:30016647-30016666 | MS.gene94447:CDS | 45.0% | |
| GCACAACAATCTTATGGCTG+AGG | + | chr5.1:30017943-30017962 | MS.gene94447:CDS | 45.0% | |
| GCGATTCCTTCCAAATCCAA+CGG | + | chr5.1:30017985-30018004 | MS.gene94447:CDS | 45.0% | |
| GGGAAGAAATGTCCTTAGGA+AGG | + | chr5.1:30017709-30017728 | MS.gene94447:CDS | 45.0% | |
| GGTTCTATTCCGGTATTTGC+AGG | + | chr5.1:30017118-30017137 | MS.gene94447:CDS | 45.0% | |
| TCAACAGTCGAGTCCTTATC+TGG | - | chr5.1:30016347-30016366 | None:intergenic | 45.0% | |
| TCATAGTAGCTGATCCCGTT+TGG | - | chr5.1:30014476-30014495 | None:intergenic | 45.0% | |
| TCGCAAACATCTTTACCCAC+AGG | - | chr5.1:30017737-30017756 | None:intergenic | 45.0% | |
| TGATACTGATGTCGGTCCTT+GGG | + | chr5.1:30013654-30013673 | MS.gene94447:intron | 45.0% | |
| TGATAGAGTGAGCCACTACT+TGG | + | chr5.1:30016605-30016624 | MS.gene94447:CDS | 45.0% | |
| TGCACAAAAGGAATCGGAAC+TGG | + | chr5.1:30017826-30017845 | MS.gene94447:CDS | 45.0% | |
| TGCAGAGATTACCCTTGACA+AGG | + | chr5.1:30017091-30017110 | MS.gene94447:CDS | 45.0% | |
| TGTGGGTAAAGATGTTTGCG+AGG | + | chr5.1:30017736-30017755 | MS.gene94447:CDS | 45.0% | |
| TTAGTACACAGTGAGCGTAC+CGG | + | chr5.1:30016381-30016400 | MS.gene94447:CDS | 45.0% | |
| TTGGAGATGAGAAGTCATGG+TGG | - | chr5.1:30016121-30016140 | None:intergenic | 45.0% | |
| ! | AACTTGTTCAGTCGTGTCAC+CGG | + | chr5.1:30016771-30016790 | MS.gene94447:CDS | 45.0% |
| ! | CAGTTTCTGATGATGCTGAG+AGG | + | chr5.1:30017204-30017223 | MS.gene94447:CDS | 45.0% |
| ! | CGTTCTTTGGGTTTACACGT+AGG | + | chr5.1:30014660-30014679 | MS.gene94447:intron | 45.0% |
| ! | GAAGAGGAATTTTCGCGTTG+AGG | + | chr5.1:30013323-30013342 | MS.gene94447:CDS | 45.0% |
| ! | TATTGAGTGCTGTGGTTCTG+GGG | + | chr5.1:30016542-30016561 | MS.gene94447:CDS | 45.0% |
| ! | TCTCCTTGAGCGGGAATTTT+TGG | + | chr5.1:30018030-30018049 | MS.gene94447:CDS | 45.0% |
| !! | ACGTATTTTCGAGAGACCAC+CGG | - | chr5.1:30016793-30016812 | None:intergenic | 45.0% |
| !! | ATGTGGTTGTAATGGATCCG+AGG | + | chr5.1:30013355-30013374 | MS.gene94447:CDS | 45.0% |
| !! | CAATGATGGCTTGCTACAGA+AGG | - | chr5.1:30014911-30014930 | None:intergenic | 45.0% |
| !! | GTTGTAATGGATCCGAGGTA+TGG | + | chr5.1:30013360-30013379 | MS.gene94447:CDS | 45.0% |
| !!! | CGTTGAGGGTTTTAAGCATG+TGG | + | chr5.1:30013338-30013357 | MS.gene94447:CDS | 45.0% |
| ACAAGCAGCACCTTGCAAAG+CGG | + | chr5.1:30017165-30017184 | MS.gene94447:CDS | 50.0% | |
| AGCAAGCCATCATTGCGCAA+AGG | + | chr5.1:30014916-30014935 | MS.gene94447:intron | 50.0% | |
| CTACAGCCTTTGCGCAATGA+TGG | - | chr5.1:30014925-30014944 | None:intergenic | 50.0% | |
| CTCTCCCAGTTGCTTAAGGT+AGG | - | chr5.1:30015203-30015222 | None:intergenic | 50.0% | |
| GATGGTAGATGCACAAGCTG+TGG | + | chr5.1:30015816-30015835 | MS.gene94447:intron | 50.0% | |
| GATTGAGTCTCTCCTTGAGC+GGG | + | chr5.1:30018021-30018040 | MS.gene94447:CDS | 50.0% | |
| GGAATCGGAACTGGAGAAAC+TGG | + | chr5.1:30017835-30017854 | MS.gene94447:CDS | 50.0% | |
| GGATTGAGTCTCTCCTTGAG+CGG | + | chr5.1:30018020-30018039 | MS.gene94447:CDS | 50.0% | |
| GTAGATGCACAAGCTGTGGT+TGG | + | chr5.1:30015820-30015839 | MS.gene94447:intron | 50.0% | |
| GTGATACTGATGTCGGTCCT+TGG | + | chr5.1:30013653-30013672 | MS.gene94447:intron | 50.0% | |
| GTTATGGCGTAAGCGCTATC+TGG | + | chr5.1:30014241-30014260 | MS.gene94447:intron | 50.0% | |
| TACTCTGGTGGAGAAGGAGA+TGG | + | chr5.1:30016653-30016672 | MS.gene94447:CDS | 50.0% | |
| TAGGACCATCGCCTAACTCA+GGG | - | chr5.1:30017346-30017365 | None:intergenic | 50.0% | |
| TGGTCCTACACTAACTGTGC+AGG | + | chr5.1:30017358-30017377 | MS.gene94447:CDS | 50.0% | |
| TTGGCGAGAGGCTATACTCT+GGG | + | chr5.1:30016088-30016107 | MS.gene94447:CDS | 50.0% | |
| TTTGGCGAGAGGCTATACTC+TGG | + | chr5.1:30016087-30016106 | MS.gene94447:CDS | 50.0% | |
| ! | ACTGTGCAGGTTCTGACAAC+AGG | + | chr5.1:30017371-30017390 | MS.gene94447:CDS | 50.0% |
| ! | AGGTTCTGACAACAGGGTCT+TGG | + | chr5.1:30017378-30017397 | MS.gene94447:CDS | 50.0% |
| ! | CAGACAAAAGCCGCTTTGCA+AGG | - | chr5.1:30017178-30017197 | None:intergenic | 50.0% |
| ! | CTGTGCAGGTTCTGACAACA+GGG | + | chr5.1:30017372-30017391 | MS.gene94447:CDS | 50.0% |
| ! | CTTGCAAAGCGGCTTTTGTC+TGG | + | chr5.1:30017176-30017195 | MS.gene94447:CDS | 50.0% |
| ! | GTGCTGACATTTCTGTCGGA+AGG | - | chr5.1:30017430-30017449 | None:intergenic | 50.0% |
| ! | GTTGTGCTCAAGTTGCTTCC+TGG | - | chr5.1:30017930-30017949 | None:intergenic | 50.0% |
| !! | AAGTGCTGATAGCAGCGCTA+TGG | + | chr5.1:30015549-30015568 | MS.gene94447:intron | 50.0% |
| !! | GAAGAGGTGCCTGCAATCAT+TGG | + | chr5.1:30017676-30017695 | MS.gene94447:CDS | 50.0% |
| !! | GTGCCTGCAATCATTGGCTT+TGG | + | chr5.1:30017682-30017701 | MS.gene94447:CDS | 50.0% |
| AATGCCGACCACCCTGAGTT+AGG | + | chr5.1:30017332-30017351 | MS.gene94447:CDS | 55.0% | |
| ACCTCAGCACCCATAATGGC+AGG | + | chr5.1:30017474-30017493 | MS.gene94447:CDS | 55.0% | |
| ATCGCCTAACTCAGGGTGGT+CGG | - | chr5.1:30017339-30017358 | None:intergenic | 55.0% | |
| CAGTTCCAGGGTCCAAGTAG+TGG | - | chr5.1:30016620-30016639 | None:intergenic | 55.0% | |
| GGCTGAGATGCGTCTGAATG+AGG | + | chr5.1:30016578-30016597 | MS.gene94447:CDS | 55.0% | |
| GTAGGACCATCGCCTAACTC+AGG | - | chr5.1:30017347-30017366 | None:intergenic | 55.0% | |
| GTCCTTAGGAAGGAGCCTGT+GGG | + | chr5.1:30017719-30017738 | MS.gene94447:CDS | 55.0% | |
| TACCCACAGGCTCCTTCCTA+AGG | - | chr5.1:30017724-30017743 | None:intergenic | 55.0% | |
| TGTCCTTAGGAAGGAGCCTG+TGG | + | chr5.1:30017718-30017737 | MS.gene94447:CDS | 55.0% | |
| TTGTTCAGTCGTGTCACCGG+TGG | + | chr5.1:30016774-30016793 | MS.gene94447:CDS | 55.0% | |
| ! | TCCTGCCATTATGGGTGCTG+AGG | - | chr5.1:30017478-30017497 | None:intergenic | 55.0% |
| CGAGAGGCTATACTCTGGGC+TGG | + | chr5.1:30016092-30016111 | MS.gene94447:CDS | 60.0% | |
| GACCACCCTGAGTTAGGCGA+TGG | + | chr5.1:30017338-30017357 | MS.gene94447:CDS | 60.0% | |
| GACCATCGCCTAACTCAGGG+TGG | - | chr5.1:30017343-30017362 | None:intergenic | 60.0% | |
| GTGAGCCACTACTTGGACCC+TGG | + | chr5.1:30016612-30016631 | MS.gene94447:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 30013309 | 30018096 | 30013309 | ID=MS.gene94447 |
| chr5.1 | mRNA | 30013309 | 30018096 | 30013309 | ID=MS.gene94447.t1;Parent=MS.gene94447 |
| chr5.1 | exon | 30013309 | 30013469 | 30013309 | ID=MS.gene94447.t1.exon1;Parent=MS.gene94447.t1 |
| chr5.1 | CDS | 30013309 | 30013469 | 30013309 | ID=cds.MS.gene94447.t1;Parent=MS.gene94447.t1 |
| chr5.1 | exon | 30016059 | 30018096 | 30016059 | ID=MS.gene94447.t1.exon2;Parent=MS.gene94447.t1 |
| chr5.1 | CDS | 30016059 | 30018096 | 30016059 | ID=cds.MS.gene94447.t1;Parent=MS.gene94447.t1 |
| Gene Sequence |
| Protein sequence |
