AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98089

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98089.t1 MTR_7g028970 95.039 907 18 2 1 881 1 906 0.0 1731
MS.gene98089.t1 MTR_4g109450 86.308 891 96 1 1 865 1 891 0.0 1558
MS.gene98089.t1 MTR_4g109450 85.907 816 89 1 1 790 1 816 0.0 1418
MS.gene98089.t1 MTR_7g012820 52.659 771 353 6 66 827 172 939 0.0 834
MS.gene98089.t1 MTR_7g012820 52.659 771 353 6 66 827 101 868 0.0 832
MS.gene98089.t1 MTR_6g013660 52.911 773 348 6 66 827 168 935 0.0 831
MS.gene98089.t1 MTR_3g106160 50.953 787 367 8 61 833 175 956 0.0 793
MS.gene98089.t1 MTR_8g100040 46.207 725 319 9 123 835 244 909 0.0 636
MS.gene98089.t1 MTR_2g099075 67.715 477 144 3 374 849 4 471 0.0 635
MS.gene98089.t1 MTR_3g498725 46.676 722 314 10 126 835 243 905 0.0 627
MS.gene98089.t1 MTR_3g102830 45.931 725 321 9 123 835 245 910 0.0 627
MS.gene98089.t1 MTR_3g098310 42.391 736 342 13 119 835 279 951 0.0 550
MS.gene98089.t1 MTR_2g006950 64.762 420 108 6 435 852 1 382 1.23e-175 521
MS.gene98089.t1 MTR_2g006950 64.961 254 68 4 615 865 350 585 1.15e-95 312
MS.gene98089.t1 MTR_3g098310 43.531 572 252 11 119 681 279 788 8.76e-141 437
MS.gene98089.t1 MTR_3g461000 40.351 456 252 7 402 841 310 761 2.41e-103 339
MS.gene98089.t1 MTR_3g461000 38.344 326 185 7 66 378 90 412 2.14e-62 226
MS.gene98089.t1 MTR_7g096480 75.000 172 19 2 690 861 96 243 3.93e-76 248
MS.gene98089.t1 MTR_7g096480 57.812 128 21 1 504 631 1 95 2.28e-35 135
MS.gene98089.t1 MTR_6g048860 50.685 146 69 2 123 266 121 265 5.31e-41 155
MS.gene98089.t1 MTR_5g098360 68.421 95 29 1 532 626 74 167 3.90e-36 134
MS.gene98089.t1 MTR_1g076440 61.628 86 33 0 605 690 158 243 1.03e-29 120
MS.gene98089.t1 MTR_1614s0010 39.500 200 114 3 612 810 1 194 2.18e-29 116
MS.gene98089.t1 MTR_5g071060 24.638 207 126 5 522 706 629 827 5.21e-11 67.4
MS.gene98089.t1 MTR_5g071060 24.638 207 126 5 522 706 662 860 5.68e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98089.t1 AT1G74310 79.101 890 154 4 1 864 1 884 0.0 1439
MS.gene98089.t1 AT1G74310 79.657 816 137 2 1 790 1 813 0.0 1332
MS.gene98089.t1 AT5G15450 51.948 770 359 6 66 827 166 932 0.0 822
MS.gene98089.t1 AT2G25140 50.627 798 374 7 61 843 166 958 0.0 805
MS.gene98089.t1 AT4G14670 66.939 611 160 5 24 632 50 620 0.0 791
MS.gene98089.t1 AT5G50920 46.345 725 314 12 131 843 250 911 0.0 629
MS.gene98089.t1 AT3G48870 45.798 714 316 8 134 835 243 897 0.0 620
MS.gene98089.t1 AT3G48870 45.798 714 316 8 134 835 274 928 0.0 619
MS.gene98089.t1 AT3G48870 45.798 714 316 8 134 835 274 928 0.0 619
MS.gene98089.t1 AT3G48870 45.798 714 316 8 134 835 274 928 0.0 619
MS.gene98089.t1 AT5G51070 50.962 312 142 1 509 809 590 901 6.04e-99 330
MS.gene98089.t1 AT5G51070 51.004 249 114 4 138 379 271 518 1.87e-69 248
MS.gene98089.t1 AT4G14675 51.351 148 40 1 694 841 1 116 4.59e-44 157
MS.gene98089.t1 AT3G45450 45.198 177 77 4 150 324 151 309 1.88e-38 147

Find 182 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAATTGATCGATTGATTT+TGG 0.086673 7.2:-70887584 MS.gene98089:CDS
CCAACCTTTCTTTATCATTT+TGG 0.125585 7.2:+70885620 None:intergenic
TTGATAATGGAAGAGCTTTC+TGG 0.214612 7.2:+70887658 None:intergenic
CATCTCATAAGTGGACTTTC+AGG 0.227432 7.2:-70884782 MS.gene98089:CDS
GGGAAACTTGATCCTGTTAT+TGG 0.273106 7.2:-70887382 MS.gene98089:CDS
AATCTGGTGTGGCTGCTTCT+AGG 0.276407 7.2:-70887522 MS.gene98089:CDS
TCCAGCCTATTCAACAATTC+TGG 0.282474 7.2:+70884698 None:intergenic
TAGGTTATTTGCTTTGGATA+TGG 0.286287 7.2:-70887200 MS.gene98089:CDS
TTCTCAAGCCACCTTCTAAT+TGG 0.289169 7.2:+70884380 None:intergenic
GTTGCATTCTCTTCCTTTCA+AGG 0.293230 7.2:+70886306 None:intergenic
TTTGAAGCATTGAAAACTTA+TGG 0.300040 7.2:-70887427 MS.gene98089:CDS
AAGAACAATCCTGTTATTAT+AGG 0.300913 7.2:-70887310 MS.gene98089:CDS
TGCTTCTAGGGTTAAATTAG+AGG 0.305282 7.2:-70887509 MS.gene98089:CDS
GATGAAATTCATCTTGTTCT+CGG 0.335841 7.2:-70887073 MS.gene98089:CDS
ACTAAATCAATTGCCTTATC+AGG 0.337759 7.2:+70886389 None:intergenic
AGTCGCTGGTACTCAGTATA+GGG 0.347042 7.2:-70887170 MS.gene98089:CDS
TGACGTTAGGTTATTTGCTT+TGG 0.360244 7.2:-70887206 MS.gene98089:CDS
TCTTCATCGCGTCCAATAAC+AGG 0.361690 7.2:+70887370 None:intergenic
GCAGACTTGTTGACAGAATC+TGG 0.376822 7.2:-70887538 MS.gene98089:CDS
AGGTTATTTGCTTTGGATAT+GGG 0.377187 7.2:-70887199 MS.gene98089:CDS
TCTTTCAATGACTTTGATAA+TGG 0.377205 7.2:+70887645 None:intergenic
TTCCTATTCCTTGGTCCAAC+CGG 0.381964 7.2:-70885475 MS.gene98089:CDS
ATATCGTAGGTCTGCAGCTC+TGG 0.383932 7.2:+70885798 None:intergenic
ATTCATCTTGTTCTCGGTGC+TGG 0.396509 7.2:-70887067 MS.gene98089:CDS
CCTGGCTCACCTATAATAAC+AGG 0.397627 7.2:+70887301 None:intergenic
ACTGGTTCCTTCCTATTCCT+TGG 0.398409 7.2:-70885484 MS.gene98089:CDS
TCAGGCCAGAATTGTTGAAT+AGG 0.402278 7.2:-70884703 MS.gene98089:CDS
TCAAGGTTGTCAATTTCCTC+TGG 0.405921 7.2:+70886323 None:intergenic
CTAACGTCAGCAAGATTACT+AGG 0.408821 7.2:+70887220 None:intergenic
AGGCTTTCTCCTTACAGCTT+CGG 0.411007 7.2:+70884964 None:intergenic
ATGTCTAGTCGGTACATAAC+TGG 0.411033 7.2:-70886779 MS.gene98089:intron
TAGTCGCTGGTACTCAGTAT+AGG 0.418958 7.2:-70887171 MS.gene98089:CDS
CAACAACACTTGATGAATAT+AGG 0.419042 7.2:-70886967 MS.gene98089:CDS
CGGAGAATACTAATGGTATC+AGG 0.420528 7.2:+70886875 None:intergenic
ATCTGGTGTGGCTGCTTCTA+GGG 0.427152 7.2:-70887521 MS.gene98089:CDS
TAAAATCAACAGTTCTTCCT+TGG 0.433442 7.2:+70884846 None:intergenic
TTTATCGTTGTGTAGGTGTA+TGG 0.436237 7.2:-70884410 MS.gene98089:intron
GGAAGTAGAACTCCATGCTT+TGG 0.442970 7.2:-70886282 MS.gene98089:CDS
TAGTCCACGGAGAATACTAA+TGG 0.443420 7.2:+70886868 None:intergenic
CAGCGACAGCTTTAACTGCT+TGG 0.449855 7.2:+70885554 None:intergenic
TTGGCTAAGAGAATAGTTAG+AGG 0.451148 7.2:-70887250 MS.gene98089:CDS
GAAAATCTTCGCAGTAAAGA+AGG 0.454419 7.2:-70887484 MS.gene98089:CDS
TGCTCGCGACCGAGTAATGC+TGG 0.456834 7.2:-70884741 MS.gene98089:CDS
TGAAAGGAAGAGAATGCAAC+TGG 0.457893 7.2:-70886303 MS.gene98089:CDS
TATACCAAATCACTTCCCTT+TGG 0.459313 7.2:+70884278 None:intergenic
ACTTGACATGTCGGAATACA+TGG 0.463181 7.2:-70885383 MS.gene98089:CDS
ACAACCTCAGCTATTTGATC+TGG 0.466362 7.2:+70885679 None:intergenic
GCTGTCTATGATGCTTATAA+AGG 0.467051 7.2:-70884342 MS.gene98089:CDS
ATTTGAAAGGAGGTTTCAAC+AGG 0.467761 7.2:-70886921 MS.gene98089:CDS
ATCAATTGCTCGTGAGATAG+AGG 0.468800 7.2:+70884656 None:intergenic
TGGTCCAAAGGGAAGTGATT+TGG 0.469216 7.2:-70884282 MS.gene98089:CDS
AGAGCTCCTCTTTGCACTAC+AGG 0.471282 7.2:-70885845 MS.gene98089:CDS
GCCAGAATTGTTGAATAGGC+TGG 0.473395 7.2:-70884699 MS.gene98089:CDS
AGAGCTGCAGACCTACGATA+TGG 0.473492 7.2:-70885796 MS.gene98089:CDS
AATCTTGAAGGTAGCACTGA+TGG 0.474434 7.2:-70885742 MS.gene98089:CDS
GGGATTGTTGATGCTGAAAC+TGG 0.476859 7.2:-70884236 MS.gene98089:CDS
CACCGGTTGGACCAAGGAAT+AGG 0.477910 7.2:+70885473 None:intergenic
GACAATTGACCGAAGCTGTA+AGG 0.481182 7.2:-70884973 MS.gene98089:CDS
TAGGCCAAAATGATAAAGAA+AGG 0.482063 7.2:-70885624 MS.gene98089:CDS
AGGGCGTCGTCTTCCTGATA+AGG 0.483337 7.2:-70886402 MS.gene98089:CDS
AATGATAAAGAAAGGTTGGT+TGG 0.485880 7.2:-70885616 MS.gene98089:CDS
AAAGAAAGGTTGGTTGGACT+TGG 0.488358 7.2:-70885610 MS.gene98089:CDS
TCTGGTACATGCTGTGGTGG+AGG 0.490797 7.2:+70887676 None:intergenic
ATAGGGGACAATTTGAAGAA+AGG 0.491092 7.2:-70887153 MS.gene98089:CDS
CCTCCTCTTTCTCCAAAGCA+TGG 0.492338 7.2:+70886270 None:intergenic
CTCGGTGCTGGTCGATGTCA+AGG 0.493860 7.2:-70887055 MS.gene98089:CDS
CTAGTAATCTTGCTGACGTT+AGG 0.493992 7.2:-70887219 MS.gene98089:CDS
GTGAGATCGAGAGCTGGTCT+AGG 0.495303 7.2:-70885523 MS.gene98089:CDS
AACAGCTGTTGTTGAAGGGT+TGG 0.496393 7.2:-70887269 MS.gene98089:CDS
AGTATAGCAAAGAGAAAGAG+AGG 0.498177 7.2:-70885903 MS.gene98089:CDS
ATATAGGCAATATGTTGAAA+AGG 0.498900 7.2:-70886951 MS.gene98089:CDS
TTGCTATACTTCATCTTCAG+AGG 0.500208 7.2:+70885916 None:intergenic
GGTCATTGGTGATGATGAAA+TGG 0.500884 7.2:-70884147 MS.gene98089:CDS
AGAGACTTGGTTGAACAAGC+AGG 0.501662 7.2:-70887403 MS.gene98089:CDS
CCTGTTATTATAGGTGAGCC+AGG 0.503359 7.2:-70887301 MS.gene98089:CDS
TGGACTAAAAGAGAAATATG+AGG 0.504636 7.2:-70886852 MS.gene98089:CDS
AGGAAATTGACAACCTTGAA+AGG 0.506457 7.2:-70886319 MS.gene98089:CDS
AGATTGATCGGTGCACCACC+AGG 0.509852 7.2:-70885343 MS.gene98089:CDS
TTCCAAGCAATTTCCAATGT+CGG 0.510415 7.2:-70887769 MS.gene98089:intron
CCAAAATGATAAAGAAAGGT+TGG 0.513032 7.2:-70885620 MS.gene98089:CDS
GACGCGATGAAGAGATAAGA+AGG 0.515086 7.2:-70887360 MS.gene98089:CDS
ATGCTCGGCACCGAGGTTTG+AGG 0.516806 7.2:+70884802 None:intergenic
CTAATGGTATCAGGCACACT+AGG 0.517122 7.2:+70886884 None:intergenic
AAGGAACCAGTTGGTTGTTG+TGG 0.521039 7.2:+70885496 None:intergenic
GGAAGACCACAACAACCAAC+TGG 0.521898 7.2:-70885502 MS.gene98089:CDS
TAAACGAGTCACTGGTATAC+CGG 0.522890 7.2:+70885645 None:intergenic
GAGAAATATGAGGGTCATCA+TGG 0.522895 7.2:-70886842 MS.gene98089:CDS
TTCCTTGGTCCAACCGGTGT+CGG 0.525904 7.2:-70885469 MS.gene98089:CDS
ACAATTTGAAGAAAGGTTGA+AGG 0.528800 7.2:-70887146 MS.gene98089:CDS
GGTATACCAGTGACTCGTTT+AGG 0.529289 7.2:-70885643 MS.gene98089:CDS
TGTCGGTGAAAATGGATATG+AGG 0.535364 7.2:-70884168 MS.gene98089:CDS
GGTAAAACAGCTGTTGTTGA+AGG 0.536011 7.2:-70887274 MS.gene98089:CDS
ACTCCATGCTTTGGAGAAAG+AGG 0.536190 7.2:-70886273 MS.gene98089:CDS
ATCTCACGAGCAATTGATGA+AGG 0.536962 7.2:-70884651 MS.gene98089:CDS
GATATGGGAGCGTTAGTCGC+TGG 0.541820 7.2:-70887184 MS.gene98089:CDS
GCAAGTATATAATCTAGTGC+TGG 0.545509 7.2:+70884557 None:intergenic
AGATTGCATAGTAGAGTTGT+GGG 0.545910 7.2:-70885583 MS.gene98089:CDS
ATTATAGGTGAGCCAGGTGT+TGG 0.546216 7.2:-70887295 MS.gene98089:CDS
TGCATTGATGCTGGTCCAAA+GGG 0.546349 7.2:-70884293 MS.gene98089:CDS
CTTTGATAATGAAAATCAGA+TGG 0.549900 7.2:-70885410 MS.gene98089:CDS
CAGATTGCATAGTAGAGTTG+TGG 0.550710 7.2:-70885584 MS.gene98089:CDS
AAAAGGATGCTGCATTTGAA+AGG 0.550728 7.2:-70886934 MS.gene98089:CDS
AGTGGAAGATGCTGAAGGGA+AGG 0.551183 7.2:-70887110 MS.gene98089:CDS
GTATACCGTGTGGAAAAGAA+TGG 0.554197 7.2:-70884260 MS.gene98089:CDS
GGTGCCGAGCATCTCATAAG+TGG 0.555456 7.2:-70884791 MS.gene98089:CDS
TGACGAATCTGCACGTTCCG+TGG 0.559545 7.2:-70887743 MS.gene98089:CDS
CGGTAAAACAGAACTTGCTA+AGG 0.560192 7.2:-70885449 MS.gene98089:CDS
AGGATGCTGCATTTGAAAGG+AGG 0.560849 7.2:-70886931 MS.gene98089:CDS
AAGAGATAAGAAGGGTTGTG+AGG 0.561006 7.2:-70887351 MS.gene98089:CDS
TGCTGAGAGAGGAATTGCAT+TGG 0.564643 7.2:-70884591 MS.gene98089:CDS
TACTCGGTATCAAGATTGAT+CGG 0.564793 7.2:-70885355 MS.gene98089:CDS
AAGAAGTGGAAGATGCTGAA+GGG 0.565725 7.2:-70887114 MS.gene98089:CDS
GAAAATGGATATGAGGTCAT+TGG 0.566679 7.2:-70884161 MS.gene98089:CDS
CTGCTTCAAGTCTTAGACGA+TGG 0.568439 7.2:-70884884 MS.gene98089:CDS
CAAGCAATTTCCAATGTCGG+TGG 0.569212 7.2:-70887766 MS.gene98089:intron
GAAAACTTATGGTAGAGACT+TGG 0.572735 7.2:-70887416 MS.gene98089:CDS
CAAAGTCATTGAAAGAGCAC+AGG 0.574398 7.2:-70887638 MS.gene98089:CDS
GGCAATTGATTTAGTTGACG+AGG 0.575315 7.2:-70886381 MS.gene98089:CDS
AGATTCGTCACCACCGACAT+TGG 0.576451 7.2:+70887756 None:intergenic
ATCTTGAAGGTAGCACTGAT+GGG 0.576475 7.2:-70885741 MS.gene98089:CDS
CGTGGACAACTTAGATGCAT+CGG 0.576960 7.2:-70886992 MS.gene98089:CDS
TTCAAACCTATGCTTGCTCG+TGG 0.581065 7.2:-70887010 MS.gene98089:CDS
GAGGTTGTAAGCCGATGGAC+CGG 0.583520 7.2:-70885664 MS.gene98089:CDS
AGTTGTCCACGAGCAAGCAT+AGG 0.583829 7.2:+70887004 None:intergenic
AGCAATTGATGAAGGTTGCA+AGG 0.584736 7.2:-70884643 MS.gene98089:CDS
TAGCTGAGGTTGTAAGCCGA+TGG 0.585089 7.2:-70885669 MS.gene98089:CDS
GGTTGCAAGGTTGCAAATGA+AGG 0.587123 7.2:-70884630 MS.gene98089:CDS
GAGCTTTCTGGTACATGCTG+TGG 0.588543 7.2:+70887670 None:intergenic
CTTTCTGGTACATGCTGTGG+TGG 0.588981 7.2:+70887673 None:intergenic
ATATGGTGCAATTGAAGAGG+TGG 0.594534 7.2:-70885779 MS.gene98089:CDS
TGGTCGATGTCAAGGATCAA+TGG 0.595645 7.2:-70887047 MS.gene98089:CDS
AAGTCCACTTATGAGATGCT+CGG 0.596761 7.2:+70884787 None:intergenic
TTGATGCTGACGGAAACTGT+TGG 0.601313 7.2:-70885703 MS.gene98089:CDS
TACCGACACCGGTTGGACCA+AGG 0.602227 7.2:+70885467 None:intergenic
GGAAGATTAACTGATGGCCA+AGG 0.602336 7.2:-70884863 MS.gene98089:CDS
GGACTAAAAGAGAAATATGA+GGG 0.605026 7.2:-70886851 MS.gene98089:CDS
ACAACTGTATGCATTGATGC+TGG 0.605777 7.2:-70884302 MS.gene98089:CDS
AAAATCTTCGCAGTAAAGAA+GGG 0.606540 7.2:-70887483 MS.gene98089:CDS
TACCGTGTGGAAAAGAATGG+AGG 0.607054 7.2:-70884257 MS.gene98089:CDS
AAAGAAGTGGAAGATGCTGA+AGG 0.609450 7.2:-70887115 MS.gene98089:CDS
CAGCCTCCTGTAGTGCAAAG+AGG 0.611133 7.2:+70885839 None:intergenic
ATGCATTGATGCTGGTCCAA+AGG 0.614033 7.2:-70884294 MS.gene98089:CDS
ACCGTGTGGAAAAGAATGGA+GGG 0.614544 7.2:-70884256 MS.gene98089:CDS
ATTATCATGACCTCAAACCT+CGG 0.614824 7.2:-70884812 MS.gene98089:CDS
GCTGTAGTGAGATCGAGAGC+TGG 0.615407 7.2:-70885529 MS.gene98089:CDS
TGTGGTGGAGGCTGTTGAGT+AGG 0.617546 7.2:+70887688 None:intergenic
GGTAGCACTGATGGGAACAA+AGG 0.620040 7.2:-70885733 MS.gene98089:CDS
GCTAGTCGTCTTGCTGAGAG+AGG 0.621064 7.2:-70884602 MS.gene98089:CDS
GACGATGGAAGATTAACTGA+TGG 0.625680 7.2:-70884869 MS.gene98089:CDS
ACGATATGGTGCAATTGAAG+AGG 0.629693 7.2:-70885782 MS.gene98089:CDS
TTGCAGCTCAGATGTCTAGT+CGG 0.630610 7.2:-70886790 MS.gene98089:CDS
TCACTGGTATACCGGTCCAT+CGG 0.631048 7.2:+70885653 None:intergenic
CTTCAATTGCACCATATCGT+AGG 0.632100 7.2:+70885785 None:intergenic
TCGGTCGCGAGCAACTTGCA+TGG 0.632357 7.2:+70884751 None:intergenic
GAGACTTGGTTGAACAAGCA+GGG 0.632899 7.2:-70887402 MS.gene98089:CDS
GTAAAACAGCTGTTGTTGAA+GGG 0.633556 7.2:-70887273 MS.gene98089:CDS
GATGGTTAGACTTGACATGT+CGG 0.635197 7.2:-70885392 MS.gene98089:CDS
TATATTGGACATGACGAAGG+TGG 0.635832 7.2:-70884995 MS.gene98089:CDS
TGCTGAAACTGGTGTGAAGT+CGG 0.635880 7.2:-70884225 MS.gene98089:CDS
AGGTATATTGGACATGACGA+AGG 0.636676 7.2:-70884998 MS.gene98089:CDS
GAGCTGCAACAACAATTGCA+CGG 0.636905 7.2:+70886804 None:intergenic
GTCGCTGGTACTCAGTATAG+GGG 0.640895 7.2:-70887169 MS.gene98089:CDS
AGGTGAGAACTTGATGCTGA+CGG 0.642271 7.2:-70885713 MS.gene98089:CDS
ATGGTGCTAGACCAATTAGA+AGG 0.648738 7.2:-70884391 MS.gene98089:CDS
ACGCGATGAAGAGATAAGAA+GGG 0.655851 7.2:-70887359 MS.gene98089:CDS
CACTACAGGAGGCTGAGAGG+CGG 0.665779 7.2:-70885831 MS.gene98089:CDS
CCATGCTTTGGAGAAAGAGG+AGG 0.666114 7.2:-70886270 MS.gene98089:CDS
AGGAATAGGAAGGAACCAGT+TGG 0.666288 7.2:+70885487 None:intergenic
GTGCTAGACCAATTAGAAGG+TGG 0.668833 7.2:-70884388 MS.gene98089:CDS
AGCAGTTAAAGCTGTCGCTG+AGG 0.669051 7.2:-70885551 MS.gene98089:CDS
GGTTGGACCAAGGAATAGGA+AGG 0.669647 7.2:+70885477 None:intergenic
GCTCCTCTTTGCACTACAGG+AGG 0.670257 7.2:-70885842 MS.gene98089:CDS
CTTGTTGACAGAATCTGGTG+TGG 0.670357 7.2:-70887533 MS.gene98089:CDS
TTGCACTACAGGAGGCTGAG+AGG 0.672526 7.2:-70885834 MS.gene98089:CDS
TCAACTTGACAGTCAGCCAG+AGG 0.673368 7.2:-70886339 MS.gene98089:CDS
AAGTGATTTGGTATACCGTG+TGG 0.679627 7.2:-70884270 MS.gene98089:CDS
GATTGATCGGTGCACCACCA+GGG 0.688237 7.2:-70885342 MS.gene98089:intron
TGGACCAGATCAAATAGCTG+AGG 0.699839 7.2:-70885683 MS.gene98089:CDS
AATACAATATCTTACCCTGG+TGG 0.701412 7.2:+70885328 None:intergenic
CAGGAAGCACAGAAGTCACG+CGG 0.704887 7.2:-70887619 MS.gene98089:CDS
TTATGAGATGCTCGGCACCG+AGG 0.725766 7.2:+70884795 None:intergenic
GATACCATTAGTATTCTCCG+TGG 0.753882 7.2:-70886872 MS.gene98089:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATGCTATATTTGA+GGG - chr7.2:70887562-70887581 MS.gene98089:CDS 15.0%
!! AATGAGATAATAAATAGTTA+AGG - chr7.2:70885444-70885463 MS.gene98089:CDS 15.0%
!! GATAAAATGTTTAATATGTT+TGG - chr7.2:70886775-70886794 MS.gene98089:intron 15.0%
!! TAAAAAAAATGCTATATTTG+AGG - chr7.2:70887561-70887580 MS.gene98089:CDS 15.0%
!!! ATAAGATTTAGTGATTTTAT+TGG - chr7.2:70885505-70885524 MS.gene98089:CDS 15.0%
!! AAAAAAATGCTATATTTGAG+GGG - chr7.2:70887563-70887582 MS.gene98089:CDS 20.0%
!! AAAAACCAAATTTCAAATGT+CGG + chr7.2:70886892-70886911 None:intergenic 20.0%
!! AATGCAATAAAAAATCTTGA+AGG - chr7.2:70886282-70886301 MS.gene98089:CDS 20.0%
!! ATGGTAAAATAAAAAATGAC+TGG - chr7.2:70885972-70885991 MS.gene98089:intron 20.0%
!! ATTAGAATAAAGGAGAATAA+TGG + chr7.2:70886044-70886063 None:intergenic 20.0%
!! GACATCAATAATTAGAATAA+AGG + chr7.2:70886054-70886073 None:intergenic 20.0%
!! TCTCTAAATATTTCAAATGT+CGG - chr7.2:70886824-70886843 MS.gene98089:CDS 20.0%
!!! AAGTCTAAATAAGTATTGAA+AGG + chr7.2:70886950-70886969 None:intergenic 20.0%
!!! GAAGTTTTTCTTTTAACTAA+GGG - chr7.2:70885832-70885851 MS.gene98089:CDS 20.0%
!!! TGAAGTTTTTCTTTTAACTA+AGG - chr7.2:70885831-70885850 MS.gene98089:CDS 20.0%
! AAAAATACAATATCTTACCC+TGG + chr7.2:70886714-70886733 None:intergenic 25.0%
! AAGAACAATCCTGTTATTAT+AGG - chr7.2:70884726-70884745 MS.gene98089:CDS 25.0%
! ATATAGGCAATATGTTGAAA+AGG - chr7.2:70885085-70885104 MS.gene98089:intron 25.0%
! ATTGAGATCAGAAATTAAAG+TGG + chr7.2:70884238-70884257 None:intergenic 25.0%
! ATTTATGTATTGAATGTGGA+TGG - chr7.2:70885563-70885582 MS.gene98089:CDS 25.0%
! CTGAAAACTCATTTCATAAT+TGG + chr7.2:70887020-70887039 None:intergenic 25.0%
! GAGTATTTATGTATTGAATG+TGG - chr7.2:70885559-70885578 MS.gene98089:CDS 25.0%
! GTAAAATAAAAAATGACTGG+TGG - chr7.2:70885975-70885994 MS.gene98089:intron 25.0%
! GTATAATTAATTACTCCATC+TGG - chr7.2:70885299-70885318 MS.gene98089:intron 25.0%
! TAAATAGTTAAGGCTGTTAT+AGG - chr7.2:70885454-70885473 MS.gene98089:CDS 25.0%
! TATGTGTACACAATCTTAAA+AGG - chr7.2:70885528-70885547 MS.gene98089:CDS 25.0%
! TCTTTCAATGACTTTGATAA+TGG + chr7.2:70884394-70884413 None:intergenic 25.0%
! TTATCCAAGAATCGATTATA+TGG - chr7.2:70885953-70885972 MS.gene98089:CDS 25.0%
! TTTATCTCCAAGTATAACTT+AGG + chr7.2:70886761-70886780 None:intergenic 25.0%
!! ACTTTAATTTCTGATCTCAA+TGG - chr7.2:70884237-70884256 MS.gene98089:CDS 25.0%
!! CAATTATGAAATGAGTTTTC+AGG - chr7.2:70887018-70887037 MS.gene98089:CDS 25.0%
!! TTTAACCGACATTTGAAATT+TGG - chr7.2:70886884-70886903 MS.gene98089:CDS 25.0%
!! TTTACCATATAATCGATTCT+TGG + chr7.2:70885960-70885979 None:intergenic 25.0%
!!! AAATGAGTTTTCAGGTATAT+TGG - chr7.2:70887026-70887045 MS.gene98089:CDS 25.0%
!!! ATTTTGATTCAGATTCCAAA+TGG - chr7.2:70887836-70887855 MS.gene98089:intron 25.0%
!!! CTTTGATAATGAAAATCAGA+TGG - chr7.2:70886626-70886645 MS.gene98089:intron 25.0%
!!! GTTTCTGTTTTGTTTGTTAA+GGG - chr7.2:70885615-70885634 MS.gene98089:CDS 25.0%
!!! TGATTATATAAGAGCACTTA+CGG + chr7.2:70887519-70887538 None:intergenic 25.0%
!!! TGTTTCTGTTTTGTTTGTTA+AGG - chr7.2:70885614-70885633 MS.gene98089:CDS 25.0%
!!! TTGTTTTAAAACTCTTTCCA+CGG + chr7.2:70884313-70884332 None:intergenic 25.0%
!!! TTTGAAGCATTGAAAACTTA+TGG - chr7.2:70884609-70884628 MS.gene98089:CDS 25.0%
!!! TTTTTCTTTTAACTAAGGGT+TGG - chr7.2:70885836-70885855 MS.gene98089:CDS 25.0%
AAAATCTTCGCAGTAAAGAA+GGG - chr7.2:70884553-70884572 MS.gene98089:CDS 30.0%
AACAAGTAAAAAGAACCAGA+TGG + chr7.2:70885317-70885336 None:intergenic 30.0%
ACAATCTTAAAAGGAATGGA+GGG - chr7.2:70885537-70885556 MS.gene98089:CDS 30.0%
ACAATTTGAAGAAAGGTTGA+AGG - chr7.2:70884890-70884909 MS.gene98089:CDS 30.0%
ACTAAATCAATTGCCTTATC+AGG + chr7.2:70885650-70885669 None:intergenic 30.0%
AGAAAACTAGCAATAAGTTC+AGG - chr7.2:70884190-70884209 MS.gene98089:CDS 30.0%
ATGGAAAAGAGCTACAAATT+TGG - chr7.2:70886801-70886820 MS.gene98089:CDS 30.0%
CAACAACACTTGATGAATAT+AGG - chr7.2:70885069-70885088 MS.gene98089:intron 30.0%
CCAAAATGATAAAGAAAGGT+TGG - chr7.2:70886416-70886435 MS.gene98089:intron 30.0%
CTAATTATTGATGTCATTGC+AGG - chr7.2:70886059-70886078 MS.gene98089:intron 30.0%
GATGAAATTCATCTTGTTCT+CGG - chr7.2:70884963-70884982 MS.gene98089:CDS 30.0%
GGAATACATGGAAAAATACT+CGG - chr7.2:70886665-70886684 MS.gene98089:intron 30.0%
GGACTAAAAGAGAAATATGA+GGG - chr7.2:70885185-70885204 MS.gene98089:intron 30.0%
GTAAAAGCCTAAGTTATACT+TGG - chr7.2:70886751-70886770 MS.gene98089:intron 30.0%
GTACACAATCTTAAAAGGAA+TGG - chr7.2:70885533-70885552 MS.gene98089:CDS 30.0%
TAAAATCAACAGTTCTTCCT+TGG + chr7.2:70887193-70887212 None:intergenic 30.0%
TAGGCCAAAATGATAAAGAA+AGG - chr7.2:70886412-70886431 MS.gene98089:intron 30.0%
TGGACTAAAAGAGAAATATG+AGG - chr7.2:70885184-70885203 MS.gene98089:intron 30.0%
TGTTTAATATGTTTGGTCCA+TGG - chr7.2:70886782-70886801 MS.gene98089:CDS 30.0%
! AAATTTGTAGCTCTTTTCCA+TGG + chr7.2:70886802-70886821 None:intergenic 30.0%
! AATGATAAAGAAAGGTTGGT+TGG - chr7.2:70886420-70886439 MS.gene98089:intron 30.0%
! ACTATGTTTTATCGTTGTGT+AGG - chr7.2:70887619-70887638 MS.gene98089:CDS 30.0%
! AGGTTATTTGCTTTGGATAT+GGG - chr7.2:70884837-70884856 MS.gene98089:CDS 30.0%
! CATATTTCTCTTTTAGTCCA+CGG + chr7.2:70885184-70885203 None:intergenic 30.0%
! CCAACCTTTCTTTATCATTT+TGG + chr7.2:70886419-70886438 None:intergenic 30.0%
! TAGGTTATTTGCTTTGGATA+TGG - chr7.2:70884836-70884855 MS.gene98089:CDS 30.0%
! TTTTTACTTCCAGCATTACT+CGG + chr7.2:70887307-70887326 None:intergenic 30.0%
!! AGCAATTGATCGATTGATTT+TGG - chr7.2:70884452-70884471 MS.gene98089:intron 30.0%
!! ATTGATTTTGGGAATTCTTG+AGG - chr7.2:70884464-70884483 MS.gene98089:intron 30.0%
!! GAGAATAATGGATGTTACAA+AGG + chr7.2:70886032-70886051 None:intergenic 30.0%
!! GATTATATAAGAGCACTTAC+GGG + chr7.2:70887518-70887537 None:intergenic 30.0%
!! GCAATTGATCGATTGATTTT+GGG - chr7.2:70884453-70884472 MS.gene98089:intron 30.0%
!! TCAAAAAGTACTAGACTGTA+AGG + chr7.2:70887095-70887114 None:intergenic 30.0%
!! TGGAAGTAAAAAAGCATTTC+AGG - chr7.2:70887315-70887334 MS.gene98089:CDS 30.0%
!!! AAGGAAGAACTGTTGATTTT+AGG - chr7.2:70887192-70887211 MS.gene98089:CDS 30.0%
!!! AATTTTGTCGCTTTCATACT+CGG + chr7.2:70885914-70885933 None:intergenic 30.0%
!!! GTTTTGTTTGTAAACTTTCG+TGG + chr7.2:70884148-70884167 None:intergenic 30.0%
AAAAGGATGCTGCATTTGAA+AGG - chr7.2:70885102-70885121 MS.gene98089:intron 35.0%
AATACAATATCTTACCCTGG+TGG + chr7.2:70886711-70886730 None:intergenic 35.0%
AGATTGCATAGTAGAGTTGT+GGG - chr7.2:70886453-70886472 MS.gene98089:intron 35.0%
AGGAAATTGACAACCTTGAA+AGG - chr7.2:70885717-70885736 MS.gene98089:CDS 35.0%
AGTATAGCAAAGAGAAAGAG+AGG - chr7.2:70886133-70886152 MS.gene98089:intron 35.0%
ATAGGGGACAATTTGAAGAA+AGG - chr7.2:70884883-70884902 MS.gene98089:CDS 35.0%
ATTATCATGACCTCAAACCT+CGG - chr7.2:70887224-70887243 MS.gene98089:CDS 35.0%
ATTTGAAAGGAGGTTTCAAC+AGG - chr7.2:70885115-70885134 MS.gene98089:intron 35.0%
CACAATCTTAAAAGGAATGG+AGG - chr7.2:70885536-70885555 MS.gene98089:CDS 35.0%
GAAAACTTATGGTAGAGACT+TGG - chr7.2:70884620-70884639 MS.gene98089:CDS 35.0%
GAAAATCTTCGCAGTAAAGA+AGG - chr7.2:70884552-70884571 MS.gene98089:CDS 35.0%
GAAAATGGATATGAGGTCAT+TGG - chr7.2:70887875-70887894 MS.gene98089:CDS 35.0%
GCAAGTATATAATCTAGTGC+TGG + chr7.2:70887482-70887501 None:intergenic 35.0%
GCTGTCTATGATGCTTATAA+AGG - chr7.2:70887694-70887713 MS.gene98089:CDS 35.0%
GTAAAACAGCTGTTGTTGAA+GGG - chr7.2:70884763-70884782 MS.gene98089:CDS 35.0%
TACTCGGTATCAAGATTGAT+CGG - chr7.2:70886681-70886700 MS.gene98089:intron 35.0%
TATACCAAATCACTTCCCTT+TGG + chr7.2:70887761-70887780 None:intergenic 35.0%
TGACGTTAGGTTATTTGCTT+TGG - chr7.2:70884830-70884849 MS.gene98089:CDS 35.0%
TTCCAAGCAATTTCCAATGT+CGG - chr7.2:70884267-70884286 MS.gene98089:CDS 35.0%
TTGCTATACTTCATCTTCAG+AGG + chr7.2:70886123-70886142 None:intergenic 35.0%
TTGGCTAAGAGAATAGTTAG+AGG - chr7.2:70884786-70884805 MS.gene98089:CDS 35.0%
TTTATCGTTGTGTAGGTGTA+TGG - chr7.2:70887626-70887645 MS.gene98089:CDS 35.0%
! AATGTGGATGGTTTTTGTTG+TGG - chr7.2:70885575-70885594 MS.gene98089:CDS 35.0%
! TTGTGAGGATTTTGTCAAGA+AGG - chr7.2:70884700-70884719 MS.gene98089:CDS 35.0%
!! TGCTTCTAGGGTTAAATTAG+AGG - chr7.2:70884527-70884546 MS.gene98089:intron 35.0%
!! TTGATAATGGAAGAGCTTTC+TGG + chr7.2:70884381-70884400 None:intergenic 35.0%
!! TTGTTGTGGTTTTGCTAACA+TGG - chr7.2:70885589-70885608 MS.gene98089:CDS 35.0%
AAAGAAGTGGAAGATGCTGA+AGG - chr7.2:70884921-70884940 MS.gene98089:CDS 40.0%
AAGAAGTGGAAGATGCTGAA+GGG - chr7.2:70884922-70884941 MS.gene98089:CDS 40.0%
AAGAGATAAGAAGGGTTGTG+AGG - chr7.2:70884685-70884704 MS.gene98089:CDS 40.0%
AAGGTGGCTTGAGAAAAATG+TGG - chr7.2:70887664-70887683 MS.gene98089:CDS 40.0%
AAGTCCACTTATGAGATGCT+CGG + chr7.2:70887252-70887271 None:intergenic 40.0%
ACAACCTCAGCTATTTGATC+TGG + chr7.2:70886360-70886379 None:intergenic 40.0%
ACGATATGGTGCAATTGAAG+AGG - chr7.2:70886254-70886273 MS.gene98089:CDS 40.0%
ACGCGATGAAGAGATAAGAA+GGG - chr7.2:70884677-70884696 MS.gene98089:CDS 40.0%
ACTTGACATGTCGGAATACA+TGG - chr7.2:70886653-70886672 MS.gene98089:intron 40.0%
AGCAATTGATGAAGGTTGCA+AGG - chr7.2:70887393-70887412 MS.gene98089:CDS 40.0%
AGGTATATTGGACATGACGA+AGG - chr7.2:70887038-70887057 MS.gene98089:CDS 40.0%
ATATGGTGCAATTGAAGAGG+TGG - chr7.2:70886257-70886276 MS.gene98089:CDS 40.0%
ATCAATTGCTCGTGAGATAG+AGG + chr7.2:70887383-70887402 None:intergenic 40.0%
ATCTCACGAGCAATTGATGA+AGG - chr7.2:70887385-70887404 MS.gene98089:CDS 40.0%
ATGTCTAGTCGGTACATAAC+TGG - chr7.2:70885257-70885276 MS.gene98089:intron 40.0%
CAGATTGCATAGTAGAGTTG+TGG - chr7.2:70886452-70886471 MS.gene98089:intron 40.0%
CCAAAAACTGTCGGTGAAAA+TGG - chr7.2:70887860-70887879 MS.gene98089:CDS 40.0%
CCAAATGGACCAAAAACTGT+CGG - chr7.2:70887851-70887870 MS.gene98089:intron 40.0%
CGGAGAATACTAATGGTATC+AGG + chr7.2:70885164-70885183 None:intergenic 40.0%
CTAACGTCAGCAAGATTACT+AGG + chr7.2:70884819-70884838 None:intergenic 40.0%
CTAGTAATCTTGCTGACGTT+AGG - chr7.2:70884817-70884836 MS.gene98089:CDS 40.0%
CTTCAATTGCACCATATCGT+AGG + chr7.2:70886254-70886273 None:intergenic 40.0%
GACGATGGAAGATTAACTGA+TGG - chr7.2:70887167-70887186 MS.gene98089:CDS 40.0%
GAGAAATATGAGGGTCATCA+TGG - chr7.2:70885194-70885213 MS.gene98089:intron 40.0%
GATACCATTAGTATTCTCCG+TGG - chr7.2:70885164-70885183 MS.gene98089:intron 40.0%
GATGGTTAGACTTGACATGT+CGG - chr7.2:70886644-70886663 MS.gene98089:intron 40.0%
GGGAAACTTGATCCTGTTAT+TGG - chr7.2:70884654-70884673 MS.gene98089:CDS 40.0%
GGTAAAACAGCTGTTGTTGA+AGG - chr7.2:70884762-70884781 MS.gene98089:CDS 40.0%
GTATACCGTGTGGAAAAGAA+TGG - chr7.2:70887776-70887795 MS.gene98089:intron 40.0%
GTTGCATTCTCTTCCTTTCA+AGG + chr7.2:70885733-70885752 None:intergenic 40.0%
TAAACGAGTCACTGGTATAC+CGG + chr7.2:70886394-70886413 None:intergenic 40.0%
TAGTCCACGGAGAATACTAA+TGG + chr7.2:70885171-70885190 None:intergenic 40.0%
TATATTGGACATGACGAAGG+TGG - chr7.2:70887041-70887060 MS.gene98089:CDS 40.0%
TATTGATGTCATTGCAGGTG+CGG - chr7.2:70886064-70886083 MS.gene98089:intron 40.0%
TCAAGGTTGTCAATTTCCTC+TGG + chr7.2:70885716-70885735 None:intergenic 40.0%
TCAGGCCAGAATTGTTGAAT+AGG - chr7.2:70887333-70887352 MS.gene98089:CDS 40.0%
TCCAGCCTATTCAACAATTC+TGG + chr7.2:70887341-70887360 None:intergenic 40.0%
TCGTCTTGTAGATGTAAGTG+TGG - chr7.2:70885805-70885824 MS.gene98089:CDS 40.0%
TGAAAGGAAGAGAATGCAAC+TGG - chr7.2:70885733-70885752 MS.gene98089:CDS 40.0%
TGTCGGTGAAAATGGATATG+AGG - chr7.2:70887868-70887887 MS.gene98089:CDS 40.0%
TTCTCAAGCCACCTTCTAAT+TGG + chr7.2:70887659-70887678 None:intergenic 40.0%
! AAAGAAAGGTTGGTTGGACT+TGG - chr7.2:70886426-70886445 MS.gene98089:intron 40.0%
! AAGTTCTGTTTTACCGACAC+CGG + chr7.2:70886583-70886602 None:intergenic 40.0%
! AATCTTGAAGGTAGCACTGA+TGG - chr7.2:70886294-70886313 MS.gene98089:CDS 40.0%
! ACAACTGTATGCATTGATGC+TGG - chr7.2:70887734-70887753 MS.gene98089:CDS 40.0%
! ATGGTGCTAGACCAATTAGA+AGG - chr7.2:70887645-70887664 MS.gene98089:CDS 40.0%
! CAAAGTCATTGAAAGAGCAC+AGG - chr7.2:70884398-70884417 MS.gene98089:CDS 40.0%
! CATCTCATAAGTGGACTTTC+AGG - chr7.2:70887254-70887273 MS.gene98089:CDS 40.0%
! CCATTTTCACCGACAGTTTT+TGG + chr7.2:70887863-70887882 None:intergenic 40.0%
! GGCAATTGATTTAGTTGACG+AGG - chr7.2:70885655-70885674 MS.gene98089:CDS 40.0%
!! AAGTGATTTGGTATACCGTG+TGG - chr7.2:70887766-70887785 MS.gene98089:intron 40.0%
!! ATCTTGAAGGTAGCACTGAT+GGG - chr7.2:70886295-70886314 MS.gene98089:CDS 40.0%
!! CGGTAAAACAGAACTTGCTA+AGG - chr7.2:70886587-70886606 MS.gene98089:intron 40.0%
!! GGTCATTGGTGATGATGAAA+TGG - chr7.2:70887889-70887908 MS.gene98089:CDS 40.0%
!!! GAAGGCAGTTTTGAAAGAAG+TGG - chr7.2:70884908-70884927 MS.gene98089:CDS 40.0%
AACAGCTGTTGTTGAAGGGT+TGG - chr7.2:70884767-70884786 MS.gene98089:CDS 45.0%
AAGGAACCAGTTGGTTGTTG+TGG + chr7.2:70886543-70886562 None:intergenic 45.0%
ACCGTGTGGAAAAGAATGGA+GGG - chr7.2:70887780-70887799 MS.gene98089:intron 45.0%
AGGAATAGGAAGGAACCAGT+TGG + chr7.2:70886552-70886571 None:intergenic 45.0%
AGGATGCTGCATTTGAAAGG+AGG - chr7.2:70885105-70885124 MS.gene98089:intron 45.0%
AGGCTTTCTCCTTACAGCTT+CGG + chr7.2:70887075-70887094 None:intergenic 45.0%
AGGTGAGAACTTGATGCTGA+CGG - chr7.2:70886323-70886342 MS.gene98089:CDS 45.0%
AGTCGCTGGTACTCAGTATA+GGG - chr7.2:70884866-70884885 MS.gene98089:CDS 45.0%
ATTATAGGTGAGCCAGGTGT+TGG - chr7.2:70884741-70884760 MS.gene98089:CDS 45.0%
CAAGCAATTTCCAATGTCGG+TGG - chr7.2:70884270-70884289 MS.gene98089:CDS 45.0%
CACCGACATTGGAAATTGCT+TGG + chr7.2:70884272-70884291 None:intergenic 45.0%
CCTGGCTCACCTATAATAAC+AGG + chr7.2:70884738-70884757 None:intergenic 45.0%
CCTGTTATTATAGGTGAGCC+AGG - chr7.2:70884735-70884754 MS.gene98089:CDS 45.0%
CGTGGACAACTTAGATGCAT+CGG - chr7.2:70885044-70885063 MS.gene98089:intron 45.0%
CTAATGGTATCAGGCACACT+AGG + chr7.2:70885155-70885174 None:intergenic 45.0%
CTGCTTCAAGTCTTAGACGA+TGG - chr7.2:70887152-70887171 MS.gene98089:CDS 45.0%
CTTGTTGACAGAATCTGGTG+TGG - chr7.2:70884503-70884522 MS.gene98089:intron 45.0%
GACAATTGACCGAAGCTGTA+AGG - chr7.2:70887063-70887082 MS.gene98089:CDS 45.0%
GACGCGATGAAGAGATAAGA+AGG - chr7.2:70884676-70884695 MS.gene98089:CDS 45.0%
GAGCTGCAACAACAATTGCA+CGG + chr7.2:70885235-70885254 None:intergenic 45.0%
GCCAGAATTGTTGAATAGGC+TGG - chr7.2:70887337-70887356 MS.gene98089:CDS 45.0%
GGAAGATTAACTGATGGCCA+AGG - chr7.2:70887173-70887192 MS.gene98089:CDS 45.0%
GGAAGTAGAACTCCATGCTT+TGG - chr7.2:70885754-70885773 MS.gene98089:CDS 45.0%
GGGATTGTTGATGCTGAAAC+TGG - chr7.2:70887800-70887819 MS.gene98089:intron 45.0%
GGTATACCAGTGACTCGTTT+AGG - chr7.2:70886393-70886412 MS.gene98089:CDS 45.0%
GGTTGCAAGGTTGCAAATGA+AGG - chr7.2:70887406-70887425 MS.gene98089:CDS 45.0%
GTGCTAGACCAATTAGAAGG+TGG - chr7.2:70887648-70887667 MS.gene98089:CDS 45.0%
TACCGTGTGGAAAAGAATGG+AGG - chr7.2:70887779-70887798 MS.gene98089:intron 45.0%
TAGTCGCTGGTACTCAGTAT+AGG - chr7.2:70884865-70884884 MS.gene98089:CDS 45.0%
TCTTCATCGCGTCCAATAAC+AGG + chr7.2:70884669-70884688 None:intergenic 45.0%
TGCTGAAACTGGTGTGAAGT+CGG - chr7.2:70887811-70887830 MS.gene98089:intron 45.0%
TGCTGAGAGAGGAATTGCAT+TGG - chr7.2:70887445-70887464 MS.gene98089:CDS 45.0%
TGGACCAGATCAAATAGCTG+AGG - chr7.2:70886353-70886372 MS.gene98089:CDS 45.0%
TGGTCCAAAGGGAAGTGATT+TGG - chr7.2:70887754-70887773 MS.gene98089:CDS 45.0%
TGGTCGATGTCAAGGATCAA+TGG - chr7.2:70884989-70885008 MS.gene98089:CDS 45.0%
TTCAAACCTATGCTTGCTCG+TGG - chr7.2:70885026-70885045 MS.gene98089:intron 45.0%
TTCCTATTCCTTGGTCCAAC+CGG - chr7.2:70886561-70886580 MS.gene98089:intron 45.0%
TTGATGCTGACGGAAACTGT+TGG - chr7.2:70886333-70886352 MS.gene98089:CDS 45.0%
TTGCAGCTCAGATGTCTAGT+CGG - chr7.2:70885246-70885265 MS.gene98089:intron 45.0%
! ACTGGTTCCTTCCTATTCCT+TGG - chr7.2:70886552-70886571 MS.gene98089:intron 45.0%
! AGAGACTTGGTTGAACAAGC+AGG - chr7.2:70884633-70884652 MS.gene98089:CDS 45.0%
! ATGCATTGATGCTGGTCCAA+AGG - chr7.2:70887742-70887761 MS.gene98089:CDS 45.0%
! ATTCATCTTGTTCTCGGTGC+TGG - chr7.2:70884969-70884988 MS.gene98089:CDS 45.0%
! GAGACTTGGTTGAACAAGCA+GGG - chr7.2:70884634-70884653 MS.gene98089:CDS 45.0%
! TCCCTCCATTCTTTTCCACA+CGG + chr7.2:70887784-70887803 None:intergenic 45.0%
! TGCATTGATGCTGGTCCAAA+GGG - chr7.2:70887743-70887762 MS.gene98089:CDS 45.0%
! TTTTGGCCTAAACGAGTCAC+TGG + chr7.2:70886402-70886421 None:intergenic 45.0%
!! ACAGCTGTTTTACCAACACC+TGG + chr7.2:70884756-70884775 None:intergenic 45.0%
!! ACTCCATGCTTTGGAGAAAG+AGG - chr7.2:70885763-70885782 MS.gene98089:CDS 45.0%
!! GCAGACTTGTTGACAGAATC+TGG - chr7.2:70884498-70884517 MS.gene98089:intron 45.0%
!!! CCGACAGTTTTTGGTCCATT+TGG + chr7.2:70887854-70887873 None:intergenic 45.0%
AATCTGGTGTGGCTGCTTCT+AGG - chr7.2:70884514-70884533 MS.gene98089:intron 50.0%
AGAGCTCCTCTTTGCACTAC+AGG - chr7.2:70886191-70886210 MS.gene98089:intron 50.0%
AGAGCTGCAGACCTACGATA+TGG - chr7.2:70886240-70886259 MS.gene98089:intron 50.0%
AGATTCGTCACCACCGACAT+TGG + chr7.2:70884283-70884302 None:intergenic 50.0%
AGCAGTTAAAGCTGTCGCTG+AGG - chr7.2:70886485-70886504 MS.gene98089:intron 50.0%
AGTGGAAGATGCTGAAGGGA+AGG - chr7.2:70884926-70884945 MS.gene98089:CDS 50.0%
AGTTGTCCACGAGCAAGCAT+AGG + chr7.2:70885035-70885054 None:intergenic 50.0%
ATATCGTAGGTCTGCAGCTC+TGG + chr7.2:70886241-70886260 None:intergenic 50.0%
ATCTGGTGTGGCTGCTTCTA+GGG - chr7.2:70884515-70884534 MS.gene98089:intron 50.0%
CCTCCTCTTTCTCCAAAGCA+TGG + chr7.2:70885769-70885788 None:intergenic 50.0%
GGAAGACCACAACAACCAAC+TGG - chr7.2:70886534-70886553 MS.gene98089:intron 50.0%
GGTTGGACCAAGGAATAGGA+AGG + chr7.2:70886562-70886581 None:intergenic 50.0%
GTCGCTGGTACTCAGTATAG+GGG - chr7.2:70884867-70884886 MS.gene98089:CDS 50.0%
TAGCTGAGGTTGTAAGCCGA+TGG - chr7.2:70886367-70886386 MS.gene98089:CDS 50.0%
TCAACTTGACAGTCAGCCAG+AGG - chr7.2:70885697-70885716 MS.gene98089:CDS 50.0%
TCACTGGTATACCGGTCCAT+CGG + chr7.2:70886386-70886405 None:intergenic 50.0%
! CAGCGACAGCTTTAACTGCT+TGG + chr7.2:70886485-70886504 None:intergenic 50.0%
! CTTTCTGGTACATGCTGTGG+TGG + chr7.2:70884366-70884385 None:intergenic 50.0%
! GAGCTTTCTGGTACATGCTG+TGG + chr7.2:70884369-70884388 None:intergenic 50.0%
! TCTGTTTTACCGACACCGGT+TGG + chr7.2:70886579-70886598 None:intergenic 50.0%
!! CCATGCTTTGGAGAAAGAGG+AGG - chr7.2:70885766-70885785 MS.gene98089:CDS 50.0%
!! GGTAGCACTGATGGGAACAA+AGG - chr7.2:70886303-70886322 MS.gene98089:CDS 50.0%
AGATTGATCGGTGCACCACC+AGG - chr7.2:70886693-70886712 MS.gene98089:intron 55.0%
CAGCCTCCTGTAGTGCAAAG+AGG + chr7.2:70886200-70886219 None:intergenic 55.0%
GAGGTTGTAAGCCGATGGAC+CGG - chr7.2:70886372-70886391 MS.gene98089:CDS 55.0%
GATTGATCGGTGCACCACCA+GGG - chr7.2:70886694-70886713 MS.gene98089:intron 55.0%
GCTAGTCGTCTTGCTGAGAG+AGG - chr7.2:70887434-70887453 MS.gene98089:CDS 55.0%
GCTCCTCTTTGCACTACAGG+AGG - chr7.2:70886194-70886213 MS.gene98089:intron 55.0%
GCTGTAGTGAGATCGAGAGC+TGG - chr7.2:70886507-70886526 MS.gene98089:intron 55.0%
TCTGGTACATGCTGTGGTGG+AGG + chr7.2:70884363-70884382 None:intergenic 55.0%
TGACGAATCTGCACGTTCCG+TGG - chr7.2:70884293-70884312 MS.gene98089:CDS 55.0%
TTATGAGATGCTCGGCACCG+AGG + chr7.2:70887244-70887263 None:intergenic 55.0%
TTCCTTGGTCCAACCGGTGT+CGG - chr7.2:70886567-70886586 MS.gene98089:intron 55.0%
TTGCACTACAGGAGGCTGAG+AGG - chr7.2:70886202-70886221 MS.gene98089:intron 55.0%
! CACCGGTTGGACCAAGGAAT+AGG + chr7.2:70886566-70886585 None:intergenic 55.0%
! CAGGAAGCACAGAAGTCACG+CGG - chr7.2:70884417-70884436 MS.gene98089:intron 55.0%
! GGTGCCGAGCATCTCATAAG+TGG - chr7.2:70887245-70887264 MS.gene98089:CDS 55.0%
! GTGAGATCGAGAGCTGGTCT+AGG - chr7.2:70886513-70886532 MS.gene98089:intron 55.0%
! TGTGGTGGAGGCTGTTGAGT+AGG + chr7.2:70884351-70884370 None:intergenic 55.0%
!! AGGGCGTCGTCTTCCTGATA+AGG - chr7.2:70885634-70885653 MS.gene98089:CDS 55.0%
!! GATATGGGAGCGTTAGTCGC+TGG - chr7.2:70884852-70884871 MS.gene98089:CDS 55.0%
CACTACAGGAGGCTGAGAGG+CGG - chr7.2:70886205-70886224 MS.gene98089:intron 60.0%
TCGGTCGCGAGCAACTTGCA+TGG + chr7.2:70887288-70887307 None:intergenic 60.0%
TGCTCGCGACCGAGTAATGC+TGG - chr7.2:70887295-70887314 MS.gene98089:CDS 60.0%
! ATGCTCGGCACCGAGGTTTG+AGG + chr7.2:70887237-70887256 None:intergenic 60.0%
! TACCGACACCGGTTGGACCA+AGG + chr7.2:70886572-70886591 None:intergenic 60.0%
!! CTCGGTGCTGGTCGATGTCA+AGG - chr7.2:70884981-70885000 MS.gene98089:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 70884139 70887919 70884139 ID=MS.gene98089
chr7.2 mRNA 70884139 70887919 70884139 ID=MS.gene98089.t1;Parent=MS.gene98089
chr7.2 exon 70887853 70887919 70887853 ID=MS.gene98089.t1.exon1;Parent=MS.gene98089.t1
chr7.2 CDS 70887853 70887919 70887853 ID=cds.MS.gene98089.t1;Parent=MS.gene98089.t1
chr7.2 exon 70886780 70887784 70886780 ID=MS.gene98089.t1.exon2;Parent=MS.gene98089.t1
chr7.2 CDS 70886780 70887784 70886780 ID=cds.MS.gene98089.t1;Parent=MS.gene98089.t1
chr7.2 exon 70886241 70886422 70886241 ID=MS.gene98089.t1.exon3;Parent=MS.gene98089.t1
chr7.2 CDS 70886241 70886422 70886241 ID=cds.MS.gene98089.t1;Parent=MS.gene98089.t1
chr7.2 exon 70885343 70885977 70885343 ID=MS.gene98089.t1.exon4;Parent=MS.gene98089.t1
chr7.2 CDS 70885343 70885977 70885343 ID=cds.MS.gene98089.t1;Parent=MS.gene98089.t1
chr7.2 exon 70884541 70885018 70884541 ID=MS.gene98089.t1.exon5;Parent=MS.gene98089.t1
chr7.2 CDS 70884541 70885018 70884541 ID=cds.MS.gene98089.t1;Parent=MS.gene98089.t1
chr7.2 exon 70884139 70884417 70884139 ID=MS.gene98089.t1.exon6;Parent=MS.gene98089.t1
chr7.2 CDS 70884139 70884417 70884139 ID=cds.MS.gene98089.t1;Parent=MS.gene98089.t1
Gene Sequence

>MS.gene98089

ATGGATCCACGAAAGTTTACAAACAAAACAAACGAATCATTTGCTGTTGCTAGAAAACTAGCAATAAGTTCAGGACATGCTCAGCTCACTTTGCATCCACTTTAATTTCTGATCTCAATGGTATATTTTTCCAAGCAATTTCCAATGTCGGTGGTGACGAATCTGCACGTTCCGTGGAAAGAGTTTTAAAACAAGCACTGAAAAAATATCCTACTCAACAGCCTCCACCACAGCATGTACCAGAAAGCTCTTCCATTATCAAAGTCATTGAAAGAGCACAGGAAGCACAGAAGTCACGCGGTGACACTCATTTAGCAATTGATCGATTGATTTTGGGAATTCTTGAGGATTCTCAAATTGCAGACTTGTTGACAGAATCTGGTGTGGCTGCTTCTAGGGTTAAATTAGAGGTTGAAAATCTTCGCAGTAAAGAAGGGACGAAAGTTGAGACTGCTTATAGTGACAATAAATTTGAAGCATTGAAAACTTATGGTAGAGACTTGGTTGAACAAGCAGGGAAACTTGATCCTGTTATTGGACGCGATGAAGAGATAAGAAGGGTTGTGAGGATTTTGTCAAGAAGGACAAAGAACAATCCTGTTATTATAGGTGAGCCAGGTGTTGGTAAAACAGCTGTTGTTGAAGGGTTGGCTAAGAGAATAGTTAGAGGAGATGTTCCTAGTAATCTTGCTGACGTTAGGTTATTTGCTTTGGATATGGGAGCGTTAGTCGCTGGTACTCAGTATAGGGGACAATTTGAAGAAAGGTTGAAGGCAGTTTTGAAAGAAGTGGAAGATGCTGAAGGGAAGGTTATTGTTTTCATTGATGAAATTCATCTTGTTCTCGGTGCTGGTCGATGTCAAGGATCAATGGATGCTGCTAATCTTTTCAAACCTATGCTTGCTCGTGGACAACTTAGATGCATCGGTGCAACAACACTTGATGAATATAGGCAATATGTTGAAAAGGATGCTGCATTTGAAAGGAGGTTTCAACAGGTTCATGTTTCTGAACCTAGTGTGCCTGATACCATTAGTATTCTCCGTGGACTAAAAGAGAAATATGAGGGTCATCATGGTGTTCGAATTCAAGACCGTGCAATTGTTGTTGCAGCTCAGATGTCTAGTCGGTACATAACTGGTATAGATAAGTTCTCTTGAGTATAATTAATTACTCCATCTGGTTCTTTTTACTTGTTGCTTTTATAGATTTTTTTTTTTTCTATTTACTTGTCACTTTCAAAGTGCAATGCGATATTAGCTACTGTTTTATCAATATTACACTTAAGTATTTATTGCGAACAGTAATGAGATAATAAATAGTTAAGGCTGTTATAGGTAAAAGTGAAATAATTATATCAAAAGTAATAAGATTTAGTGATTTTATTGGTATGTGTACACAATCTTAAAAGGAATGGAGGGAGTATTTATGTATTGAATGTGGATGGTTTTTGTTGTGGTTTTGCTAACATGGTATGTTTCTGTTTTGTTTGTTAAGGGCGTCGTCTTCCTGATAAGGCAATTGATTTAGTTGACGAGGCTTGTGCAAATGTTAGAGTTCAACTTGACAGTCAGCCAGAGGAAATTGACAACCTTGAAAGGAAGAGAATGCAACTGGAAGTAGAACTCCATGCTTTGGAGAAAGAGGAGGACAAAGCTAGCAAAGCTCGTCTTGTAGATGTAAGTGTGGATTTGAAGTTTTTCTTTTAACTAAGGGTTGGTGATATATTTGACAATGAACATATATCTATTCTAAAGAGCTATGCTAAATTTCCGAGTATGAAAGCGACAAAATTCTACGACAATTGAATAAAATTATCCAAGAATCGATTATATGGTAAAATAAAAAATGACTGGTGGACAATGATTTTTGTTGTTTTCGTATACACTGCCTTTGTAACATCCATTATTCTCCTTTATTCTAATTATTGATGTCATTGCAGGTGCGGAAAGAACTTGACAATTTAAGAGACAAGCTTCAACCTCTGAAGATGAAGTATAGCAAAGAGAAAGAGAGGATTGATGAGATTCGAAGTCTGAAACAGAAACGTGAAGAGCTCCTCTTTGCACTACAGGAGGCTGAGAGGCGGTATGATCTAGCCAGAGCTGCAGACCTACGATATGGTGCAATTGAAGAGGTGGAAAATGCAATAAAAAATCTTGAAGGTAGCACTGATGGGAACAAAGGTGAGAACTTGATGCTGACGGAAACTGTTGGACCAGATCAAATAGCTGAGGTTGTAAGCCGATGGACCGGTATACCAGTGACTCGTTTAGGCCAAAATGATAAAGAAAGGTTGGTTGGACTTGGTGACAGATTGCATAGTAGAGTTGTGGGACAAGACCAAGCAGTTAAAGCTGTCGCTGAGGCTGTAGTGAGATCGAGAGCTGGTCTAGGAAGACCACAACAACCAACTGGTTCCTTCCTATTCCTTGGTCCAACCGGTGTCGGTAAAACAGAACTTGCTAAGGCTCTTGCTCAACAACTCTTTGATAATGAAAATCAGATGGTTAGACTTGACATGTCGGAATACATGGAAAAATACTCGGTATCAAGATTGATCGGTGCACCACCAGGGTAAGATATTGTATTTTTAGCTGCATTTGATTATAGTAAAAGCCTAAGTTATACTTGGAGATAAAATGTTTAATATGTTTGGTCCATGGAAAAGAGCTACAAATTTGGTCTCTAAATATTTCAAATGTCGGTCAAATTAGTCATTTATAAAGTGTGTGTTGAGATTTATTTAACCGACATTTGAAATTTGGTTTTTCAGACTTCATTGAATGCGAGTTGTTTTTTCTTTTTCCTTTCAATACTTATTTAGACTTGTAGTCTTTCACTTATCGTGAATTAAAGATATGCATCTCAAGTGTCACCAATTATGAAATGAGTTTTCAGGTATATTGGACATGACGAAGGTGGACAATTGACCGAAGCTGTAAGGAGAAAGCCTTACAGTCTAGTACTTTTTGATGAAGTAGAGAAAGCACATACATCTGTATTCAACACTCTGCTTCAAGTCTTAGACGATGGAAGATTAACTGATGGCCAAGGAAGAACTGTTGATTTTAGGAACACAGTCATTATCATGACCTCAAACCTCGGTGCCGAGCATCTCATAAGTGGACTTTCAGGAAATTGTACCATGCAAGTTGCTCGCGACCGAGTAATGCTGGAAGTAAAAAAGCATTTCAGGCCAGAATTGTTGAATAGGCTGGACGAAGTTGTTGTATTCGATCCTCTATCTCACGAGCAATTGATGAAGGTTGCAAGGTTGCAAATGAAGGATGTAGCTAGTCGTCTTGCTGAGAGAGGAATTGCATTGGCAGTTACTGATCCAGCACTAGATTATATACTTGCTGAAAGCTATGATCCCGTAAGTGCTCTTATATAATCATCATCTTAATCATTTTCTTAAATAAAAAAAATGCTATATTTGAGGGGACTAAAATCAAATTTAAACGAAAAATGTGACTAACTATGTTTTATCGTTGTGTAGGTGTATGGTGCTAGACCAATTAGAAGGTGGCTTGAGAAAAATGTGGTGACAGAGCTGTCTATGATGCTTATAAAGGAAGAAATTGATGAGAATACAACTGTATGCATTGATGCTGGTCCAAAGGGAAGTGATTTGGTATACCGTGTGGAAAAGAATGGAGGGATTGTTGATGCTGAAACTGGTGTGAAGTCGGATATTTTGATTCAGATTCCAAATGGACCAAAAACTGTCGGTGAAAATGGATATGAGGTCATTGGTGATGATGAAATGGAAGAGTAA
Protein sequence

>MS.gene98089.t1

MDPRKFTNKTNESFAVARKLAITISNVGGDESARSVERVLKQALKKYPTQQPPPQHVPESSSIIKVIERAQEAQKSRGDTHLAIDRLILGILEDSQIADLLTESGVAASRVKLEVENLRSKEGTKVETAYSDNKFEALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVIIGEPGVGKTAVVEGLAKRIVRGDVPSNLADVRLFALDMGALVAGTQYRGQFEERLKAVLKEVEDAEGKVIVFIDEIHLVLGAGRCQGSMDAANLFKPMLARGQLRCIGATTLDEYRQYVEKDAAFERRFQQVHVSEPSVPDTISILRGLKEKYEGHHGVRIQDRAIVVAAQMSSRYITGRRLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEEDKASKARLVDVRKELDNLRDKLQPLKMKYSKEKERIDEIRSLKQKREELLFALQEAERRYDLARAADLRYGAIEEVENAIKNLEGSTDGNKGENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNDKERLVGLGDRLHSRVVGQDQAVKAVAEAVVRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAQQLFDNENQMVRLDMSEYMEKYSVSRLIGAPPGYIGHDEGGQLTEAVRRKPYSLVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLISGLSGNCTMQVARDRVMLEVKKHFRPELLNRLDEVVVFDPLSHEQLMKVARLQMKDVASRLAERGIALAVTDPALDYILAESYDPVYGARPIRRWLEKNVVTELSMMLIKEEIDENTTVCIDAGPKGSDLVYRVEKNGGIVDAETGVKSDILIQIPNGPKTVGENGYEVIGDDEMEE