Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99244.t1 | KEH40977.1 | 87.6 | 461 | 21 | 1 | 1 | 461 | 1 | 425 | 7.10E-231 | 809.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99244.t1 | Q8GT20 | 66.1 | 440 | 147 | 2 | 2 | 441 | 6 | 443 | 4.0e-174 | 612.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99244.t1 | A0A072VGR1 | 87.6 | 461 | 21 | 1 | 1 | 461 | 1 | 425 | 5.1e-231 | 809.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32938 | MS.gene99244 | PPI |
| MS.gene38362 | MS.gene99244 | PPI |
| MS.gene99244 | MS.gene38703 | PPI |
| MS.gene99244 | MS.gene38365 | PPI |
| MS.gene99244 | MS.gene012961 | PPI |
| MS.gene99244 | MS.gene32933 | PPI |
| MS.gene99244 | MS.gene38363 | PPI |
| MS.gene99244 | MS.gene66891 | PPI |
| MS.gene99244 | MS.gene38701 | PPI |
| MS.gene99244 | MS.gene38359 | PPI |
| MS.gene99244 | MS.gene039597 | PPI |
| MS.gene38704 | MS.gene99244 | PPI |
| MS.gene38361 | MS.gene99244 | PPI |
| MS.gene99244 | MS.gene012959 | PPI |
| MS.gene046246 | MS.gene99244 | PPI |
| MS.gene99244 | MS.gene012957 | PPI |
| MS.gene38700 | MS.gene99244 | PPI |
| MS.gene012960 | MS.gene99244 | PPI |
| MS.gene012965 | MS.gene99244 | PPI |
| MS.gene99244 | MS.gene38699 | PPI |
| MS.gene99244 | MS.gene38706 | PPI |
| MS.gene99244 | MS.gene32934 | PPI |
| MS.gene99244 | MS.gene038905 | PPI |
| MS.gene99244 | MS.gene042317 | PPI |
| MS.gene99244 | MS.gene069321 | PPI |
| MS.gene95242 | MS.gene99244 | PPI |
| MS.gene99244 | MS.gene38702 | PPI |
| MS.gene99244 | MS.gene069436 | PPI |
| MS.gene32936 | MS.gene99244 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99244.t1 | MTR_1g040320 | 87.636 | 461 | 21 | 1 | 1 | 461 | 1 | 425 | 0.0 | 818 |
| MS.gene99244.t1 | MTR_1g040175 | 85.249 | 461 | 65 | 1 | 1 | 461 | 1 | 458 | 0.0 | 816 |
| MS.gene99244.t1 | MTR_1g040215 | 76.790 | 461 | 107 | 0 | 1 | 461 | 1 | 461 | 0.0 | 746 |
| MS.gene99244.t1 | MTR_1g040195 | 72.017 | 461 | 104 | 3 | 1 | 461 | 1 | 436 | 0.0 | 674 |
| MS.gene99244.t1 | MTR_1g040315 | 65.293 | 461 | 116 | 4 | 1 | 461 | 1 | 417 | 0.0 | 588 |
| MS.gene99244.t1 | MTR_7g114560 | 55.727 | 454 | 194 | 6 | 5 | 455 | 6 | 455 | 0.0 | 521 |
| MS.gene99244.t1 | MTR_7g114550 | 54.367 | 458 | 202 | 6 | 2 | 456 | 3 | 456 | 0.0 | 520 |
| MS.gene99244.t1 | MTR_5g076700 | 55.507 | 454 | 194 | 6 | 5 | 454 | 6 | 455 | 0.0 | 514 |
| MS.gene99244.t1 | MTR_7g114520 | 55.507 | 454 | 183 | 7 | 5 | 448 | 7 | 451 | 0.0 | 514 |
| MS.gene99244.t1 | MTR_7g114470 | 55.044 | 456 | 194 | 7 | 5 | 454 | 7 | 457 | 5.20e-177 | 504 |
| MS.gene99244.t1 | MTR_1g081660 | 57.859 | 439 | 180 | 5 | 4 | 440 | 13 | 448 | 3.02e-176 | 501 |
| MS.gene99244.t1 | MTR_7g114490 | 54.292 | 431 | 191 | 5 | 5 | 432 | 6 | 433 | 1.96e-169 | 486 |
| MS.gene99244.t1 | MTR_0042s0190 | 73.737 | 297 | 78 | 0 | 165 | 461 | 1 | 297 | 6.53e-163 | 461 |
| MS.gene99244.t1 | MTR_0042s0190 | 74.138 | 232 | 60 | 0 | 230 | 461 | 1 | 232 | 5.51e-123 | 358 |
| MS.gene99244.t1 | MTR_7g114510 | 51.125 | 311 | 134 | 6 | 147 | 448 | 8 | 309 | 7.76e-101 | 305 |
| MS.gene99244.t1 | MTR_0502s0010 | 57.438 | 242 | 95 | 4 | 100 | 337 | 1 | 238 | 1.24e-95 | 288 |
| MS.gene99244.t1 | MTR_3g035000 | 62.613 | 222 | 56 | 3 | 199 | 419 | 43 | 238 | 2.01e-87 | 270 |
| MS.gene99244.t1 | MTR_0042s0230 | 84.354 | 147 | 23 | 0 | 1 | 147 | 1 | 147 | 5.92e-86 | 260 |
| MS.gene99244.t1 | MTR_3g098980 | 32.867 | 429 | 269 | 10 | 9 | 432 | 14 | 428 | 1.42e-78 | 251 |
| MS.gene99244.t1 | MTR_7g114420 | 44.558 | 294 | 128 | 6 | 165 | 454 | 1 | 263 | 2.10e-76 | 240 |
| MS.gene99244.t1 | MTR_8g096530 | 32.414 | 435 | 274 | 11 | 1 | 430 | 1 | 420 | 8.99e-75 | 241 |
| MS.gene99244.t1 | MTR_7g027175 | 32.547 | 424 | 266 | 11 | 13 | 430 | 20 | 429 | 2.10e-74 | 240 |
| MS.gene99244.t1 | MTR_8g039950 | 79.688 | 128 | 26 | 0 | 1 | 128 | 1 | 128 | 6.88e-71 | 221 |
| MS.gene99244.t1 | MTR_7g114500 | 59.333 | 150 | 61 | 0 | 2 | 151 | 3 | 152 | 1.30e-63 | 202 |
| MS.gene99244.t1 | MTR_3g051790 | 62.329 | 146 | 55 | 0 | 2 | 147 | 6 | 151 | 2.38e-59 | 192 |
| MS.gene99244.t1 | MTR_3g112180 | 32.905 | 389 | 233 | 12 | 17 | 391 | 20 | 394 | 2.02e-54 | 188 |
| MS.gene99244.t1 | MTR_1g053315 | 30.385 | 441 | 287 | 12 | 17 | 440 | 26 | 463 | 2.80e-54 | 188 |
| MS.gene99244.t1 | MTR_4g007540 | 30.282 | 426 | 271 | 12 | 9 | 420 | 3 | 416 | 7.76e-53 | 184 |
| MS.gene99244.t1 | MTR_8g075610 | 29.742 | 427 | 254 | 11 | 16 | 420 | 1 | 403 | 2.30e-51 | 179 |
| MS.gene99244.t1 | MTR_4g055170 | 28.728 | 456 | 296 | 12 | 3 | 437 | 6 | 453 | 1.38e-50 | 178 |
| MS.gene99244.t1 | MTR_2g105330 | 28.636 | 440 | 288 | 12 | 9 | 436 | 3 | 428 | 1.44e-49 | 175 |
| MS.gene99244.t1 | MTR_2g064495 | 28.636 | 440 | 288 | 12 | 9 | 436 | 3 | 428 | 7.39e-49 | 173 |
| MS.gene99244.t1 | MTR_3g071320 | 30.923 | 401 | 249 | 11 | 9 | 391 | 5 | 395 | 2.35e-45 | 164 |
| MS.gene99244.t1 | MTR_7g110610 | 29.808 | 416 | 223 | 13 | 5 | 411 | 1 | 356 | 5.76e-44 | 159 |
| MS.gene99244.t1 | MTR_7g084940 | 28.354 | 395 | 266 | 9 | 5 | 391 | 12 | 397 | 9.01e-44 | 159 |
| MS.gene99244.t1 | MTR_3g465990 | 28.913 | 460 | 286 | 15 | 9 | 439 | 10 | 457 | 3.84e-42 | 155 |
| MS.gene99244.t1 | MTR_7g086000 | 30.049 | 406 | 237 | 16 | 17 | 385 | 12 | 407 | 6.88e-40 | 149 |
| MS.gene99244.t1 | MTR_3g465930 | 27.742 | 465 | 293 | 14 | 7 | 439 | 8 | 461 | 8.74e-40 | 149 |
| MS.gene99244.t1 | MTR_7g084910 | 27.708 | 397 | 246 | 11 | 8 | 391 | 16 | 384 | 2.31e-39 | 147 |
| MS.gene99244.t1 | MTR_3g465980 | 28.696 | 460 | 287 | 16 | 9 | 439 | 10 | 457 | 9.77e-39 | 146 |
| MS.gene99244.t1 | MTR_3g026950 | 26.961 | 408 | 258 | 10 | 17 | 392 | 10 | 409 | 2.51e-38 | 145 |
| MS.gene99244.t1 | MTR_7g085930 | 27.594 | 424 | 259 | 15 | 9 | 392 | 6 | 421 | 3.67e-38 | 145 |
| MS.gene99244.t1 | MTR_3g465910 | 28.362 | 409 | 261 | 12 | 7 | 392 | 8 | 407 | 4.00e-38 | 145 |
| MS.gene99244.t1 | MTR_6g053810 | 25.265 | 471 | 305 | 13 | 3 | 439 | 5 | 462 | 5.39e-38 | 144 |
| MS.gene99244.t1 | MTR_7g085990 | 27.468 | 466 | 282 | 18 | 9 | 434 | 2 | 451 | 8.25e-38 | 144 |
| MS.gene99244.t1 | MTR_2g015430 | 30.412 | 388 | 256 | 10 | 9 | 387 | 2 | 384 | 1.25e-37 | 143 |
| MS.gene99244.t1 | MTR_7g056087 | 27.640 | 445 | 274 | 16 | 16 | 434 | 11 | 433 | 6.39e-37 | 140 |
| MS.gene99244.t1 | MTR_3g465880 | 27.447 | 470 | 291 | 17 | 7 | 439 | 8 | 464 | 1.80e-33 | 132 |
| MS.gene99244.t1 | MTR_4g088765 | 79.452 | 73 | 15 | 0 | 1 | 73 | 1 | 73 | 1.99e-33 | 122 |
| MS.gene99244.t1 | MTR_3g465950 | 28.021 | 389 | 252 | 12 | 7 | 378 | 8 | 385 | 2.80e-33 | 131 |
| MS.gene99244.t1 | MTR_4g127650 | 26.570 | 414 | 267 | 12 | 8 | 392 | 9 | 414 | 3.89e-33 | 130 |
| MS.gene99244.t1 | MTR_3g049150 | 26.980 | 404 | 255 | 12 | 17 | 390 | 10 | 403 | 7.79e-33 | 129 |
| MS.gene99244.t1 | MTR_4g013050 | 24.612 | 451 | 241 | 16 | 17 | 430 | 12 | 400 | 8.01e-31 | 123 |
| MS.gene99244.t1 | MTR_5g090830 | 26.733 | 404 | 228 | 14 | 61 | 427 | 63 | 435 | 2.52e-30 | 123 |
| MS.gene99244.t1 | MTR_4g097090 | 25.977 | 435 | 278 | 14 | 17 | 420 | 17 | 438 | 6.63e-30 | 121 |
| MS.gene99244.t1 | MTR_5g090810 | 26.065 | 399 | 237 | 13 | 61 | 427 | 63 | 435 | 1.73e-29 | 120 |
| MS.gene99244.t1 | MTR_5g090880 | 25.750 | 400 | 238 | 14 | 61 | 427 | 64 | 437 | 2.20e-27 | 114 |
| MS.gene99244.t1 | MTR_3g450710 | 26.136 | 440 | 232 | 18 | 64 | 454 | 65 | 460 | 5.01e-27 | 113 |
| MS.gene99244.t1 | MTR_3g465870 | 28.814 | 295 | 185 | 10 | 5 | 282 | 8 | 294 | 1.17e-25 | 108 |
| MS.gene99244.t1 | MTR_3g450690 | 25.635 | 433 | 240 | 17 | 64 | 454 | 72 | 464 | 1.40e-24 | 106 |
| MS.gene99244.t1 | MTR_1g094790 | 26.116 | 448 | 252 | 19 | 15 | 419 | 9 | 420 | 9.71e-24 | 103 |
| MS.gene99244.t1 | MTR_5g084870 | 22.901 | 393 | 260 | 13 | 15 | 388 | 9 | 377 | 2.10e-23 | 102 |
| MS.gene99244.t1 | MTR_3g070170 | 26.932 | 427 | 243 | 17 | 53 | 432 | 55 | 459 | 2.48e-23 | 102 |
| MS.gene99244.t1 | MTR_4g094828 | 25.185 | 405 | 266 | 15 | 51 | 432 | 49 | 439 | 3.05e-22 | 99.4 |
| MS.gene99244.t1 | MTR_4g094842 | 25.729 | 377 | 245 | 14 | 48 | 399 | 46 | 412 | 6.91e-22 | 98.2 |
| MS.gene99244.t1 | MTR_0190s0020 | 25.432 | 405 | 262 | 16 | 48 | 432 | 47 | 431 | 3.32e-21 | 96.3 |
| MS.gene99244.t1 | MTR_3g086020 | 24.181 | 397 | 242 | 15 | 15 | 390 | 11 | 369 | 3.56e-21 | 95.9 |
| MS.gene99244.t1 | MTR_5g084850 | 22.308 | 390 | 265 | 12 | 15 | 388 | 9 | 376 | 1.29e-20 | 94.4 |
| MS.gene99244.t1 | MTR_3g101960 | 27.989 | 368 | 226 | 16 | 61 | 402 | 65 | 419 | 2.29e-20 | 93.6 |
| MS.gene99244.t1 | MTR_8g041770 | 25.205 | 365 | 239 | 14 | 49 | 395 | 49 | 397 | 3.78e-20 | 92.8 |
| MS.gene99244.t1 | MTR_8g467580 | 24.634 | 410 | 276 | 15 | 15 | 405 | 9 | 404 | 5.18e-20 | 92.4 |
| MS.gene99244.t1 | MTR_8g079710 | 26.404 | 356 | 220 | 15 | 59 | 387 | 54 | 394 | 5.25e-20 | 92.4 |
| MS.gene99244.t1 | MTR_3g101930 | 26.446 | 363 | 223 | 14 | 64 | 397 | 70 | 417 | 8.31e-20 | 92.0 |
| MS.gene99244.t1 | MTR_4g094835 | 24.324 | 407 | 268 | 14 | 46 | 432 | 49 | 435 | 1.16e-19 | 91.7 |
| MS.gene99244.t1 | MTR_7g026860 | 27.027 | 407 | 254 | 20 | 48 | 432 | 42 | 427 | 1.93e-19 | 90.9 |
| MS.gene99244.t1 | MTR_8g079970 | 23.018 | 391 | 268 | 11 | 15 | 388 | 9 | 383 | 3.15e-19 | 90.1 |
| MS.gene99244.t1 | MTR_8g079950 | 22.475 | 396 | 264 | 12 | 15 | 388 | 9 | 383 | 2.95e-18 | 87.4 |
| MS.gene99244.t1 | MTR_4g022720 | 25.613 | 367 | 244 | 14 | 51 | 399 | 44 | 399 | 3.29e-18 | 87.0 |
| MS.gene99244.t1 | MTR_3g101900 | 24.878 | 410 | 259 | 16 | 61 | 445 | 63 | 448 | 3.47e-18 | 87.0 |
| MS.gene99244.t1 | MTR_4g094832 | 26.836 | 354 | 225 | 15 | 94 | 432 | 85 | 419 | 6.53e-18 | 86.3 |
| MS.gene99244.t1 | MTR_3g101970 | 28.520 | 277 | 172 | 10 | 61 | 329 | 66 | 324 | 7.43e-18 | 85.9 |
| MS.gene99244.t1 | MTR_4g022800 | 26.582 | 316 | 201 | 12 | 23 | 323 | 25 | 324 | 1.96e-17 | 84.7 |
| MS.gene99244.t1 | MTR_7g114417 | 67.308 | 52 | 16 | 1 | 89 | 139 | 29 | 80 | 1.97e-17 | 77.4 |
| MS.gene99244.t1 | MTR_4g094838 | 22.432 | 370 | 238 | 12 | 53 | 399 | 53 | 396 | 3.08e-17 | 84.0 |
| MS.gene99244.t1 | MTR_5g084900 | 20.958 | 334 | 219 | 10 | 61 | 388 | 6 | 300 | 6.60e-17 | 82.4 |
| MS.gene99244.t1 | MTR_3g102010 | 26.790 | 377 | 223 | 16 | 61 | 402 | 62 | 420 | 6.72e-16 | 80.1 |
| MS.gene99244.t1 | MTR_3g102020 | 25.067 | 375 | 228 | 15 | 61 | 402 | 66 | 420 | 2.30e-15 | 78.6 |
| MS.gene99244.t1 | MTR_4g022825 | 25.185 | 405 | 251 | 17 | 57 | 432 | 48 | 429 | 2.79e-15 | 78.2 |
| MS.gene99244.t1 | MTR_4g022670 | 23.876 | 356 | 246 | 13 | 51 | 387 | 44 | 393 | 8.51e-15 | 76.6 |
| MS.gene99244.t1 | MTR_6g045553 | 23.698 | 384 | 216 | 15 | 58 | 385 | 60 | 422 | 1.10e-14 | 76.3 |
| MS.gene99244.t1 | MTR_4g022760 | 28.727 | 275 | 176 | 11 | 64 | 323 | 55 | 324 | 5.06e-14 | 73.9 |
| MS.gene99244.t1 | MTR_3g051820 | 48.276 | 87 | 41 | 3 | 367 | 452 | 1 | 84 | 8.95e-14 | 67.4 |
| MS.gene99244.t1 | MTR_3g026310 | 25.753 | 365 | 229 | 16 | 64 | 395 | 55 | 410 | 1.74e-13 | 72.8 |
| MS.gene99244.t1 | MTR_3g049140 | 32.000 | 150 | 83 | 5 | 257 | 390 | 54 | 200 | 2.53e-13 | 70.1 |
| MS.gene99244.t1 | MTR_2g007880 | 23.239 | 426 | 249 | 19 | 6 | 389 | 14 | 403 | 5.38e-13 | 71.2 |
| MS.gene99244.t1 | MTR_2g036780 | 23.785 | 391 | 238 | 13 | 72 | 437 | 74 | 429 | 9.75e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99244.t1 | AT5G17540 | 54.487 | 468 | 199 | 9 | 1 | 461 | 1 | 461 | 7.79e-175 | 498 |
| MS.gene99244.t1 | AT3G03480 | 52.252 | 444 | 197 | 9 | 5 | 441 | 15 | 450 | 1.40e-152 | 441 |
| MS.gene99244.t1 | AT5G63560 | 32.952 | 437 | 267 | 11 | 1 | 430 | 1 | 418 | 6.80e-80 | 254 |
| MS.gene99244.t1 | AT5G41040 | 34.398 | 407 | 244 | 11 | 7 | 404 | 15 | 407 | 7.26e-80 | 254 |
| MS.gene99244.t1 | AT5G41040 | 34.398 | 407 | 244 | 11 | 7 | 404 | 31 | 423 | 8.90e-80 | 255 |
| MS.gene99244.t1 | AT3G48720 | 30.575 | 435 | 284 | 10 | 1 | 430 | 1 | 422 | 8.26e-77 | 246 |
| MS.gene99244.t1 | AT1G27620 | 29.933 | 451 | 287 | 12 | 10 | 450 | 10 | 441 | 1.00e-52 | 184 |
| MS.gene99244.t1 | AT5G48930 | 30.045 | 446 | 278 | 13 | 8 | 436 | 2 | 430 | 1.63e-52 | 183 |
| MS.gene99244.t1 | AT3G62160 | 32.178 | 404 | 236 | 13 | 5 | 394 | 1 | 380 | 2.49e-50 | 177 |
| MS.gene99244.t1 | AT1G03390 | 31.218 | 394 | 246 | 12 | 14 | 391 | 27 | 411 | 6.01e-49 | 174 |
| MS.gene99244.t1 | AT5G57840 | 28.261 | 414 | 260 | 12 | 8 | 397 | 2 | 402 | 3.10e-46 | 166 |
| MS.gene99244.t1 | AT1G28680 | 28.700 | 446 | 293 | 14 | 13 | 441 | 8 | 445 | 4.88e-46 | 166 |
| MS.gene99244.t1 | AT1G65450 | 29.978 | 457 | 274 | 15 | 7 | 440 | 16 | 449 | 7.76e-46 | 165 |
| MS.gene99244.t1 | AT2G40230 | 30.858 | 431 | 262 | 15 | 9 | 421 | 5 | 417 | 4.29e-45 | 163 |
| MS.gene99244.t1 | AT2G19070 | 29.268 | 410 | 254 | 13 | 12 | 392 | 7 | 409 | 4.66e-44 | 160 |
| MS.gene99244.t1 | AT1G28680 | 29.700 | 367 | 242 | 11 | 13 | 368 | 8 | 369 | 8.92e-42 | 153 |
| MS.gene99244.t1 | AT3G47170 | 26.582 | 474 | 299 | 15 | 3 | 440 | 6 | 466 | 2.52e-38 | 145 |
| MS.gene99244.t1 | AT5G07080 | 28.784 | 403 | 250 | 11 | 9 | 387 | 14 | 403 | 3.04e-38 | 144 |
| MS.gene99244.t1 | AT2G23510 | 27.778 | 468 | 287 | 17 | 1 | 439 | 5 | 450 | 1.36e-35 | 137 |
| MS.gene99244.t1 | AT2G25150 | 27.273 | 451 | 301 | 14 | 9 | 441 | 13 | 454 | 2.85e-35 | 137 |
| MS.gene99244.t1 | AT1G32910 | 28.395 | 405 | 249 | 14 | 62 | 441 | 63 | 451 | 1.40e-34 | 135 |
| MS.gene99244.t1 | AT1G78990 | 27.907 | 387 | 232 | 13 | 62 | 431 | 65 | 421 | 7.11e-34 | 132 |
| MS.gene99244.t1 | AT1G31490 | 28.610 | 374 | 222 | 13 | 38 | 389 | 36 | 386 | 2.11e-29 | 120 |
| MS.gene99244.t1 | AT1G24420 | 27.000 | 400 | 236 | 15 | 15 | 388 | 11 | 380 | 4.27e-25 | 107 |
| MS.gene99244.t1 | AT1G24420 | 27.000 | 400 | 236 | 15 | 15 | 388 | 11 | 380 | 4.27e-25 | 107 |
| MS.gene99244.t1 | AT5G07860 | 26.884 | 398 | 239 | 12 | 64 | 437 | 72 | 441 | 2.10e-23 | 102 |
| MS.gene99244.t1 | AT5G07850 | 27.945 | 365 | 225 | 14 | 64 | 402 | 70 | 422 | 5.43e-23 | 101 |
| MS.gene99244.t1 | AT3G26040 | 24.250 | 400 | 254 | 14 | 15 | 390 | 9 | 383 | 8.87e-23 | 100 |
| MS.gene99244.t1 | AT4G31910 | 27.089 | 395 | 242 | 14 | 25 | 384 | 24 | 407 | 9.21e-23 | 100 |
| MS.gene99244.t1 | AT5G16410 | 25.496 | 353 | 220 | 13 | 62 | 390 | 89 | 422 | 9.60e-23 | 101 |
| MS.gene99244.t1 | AT5G23970 | 25.167 | 449 | 270 | 15 | 8 | 431 | 2 | 409 | 3.60e-22 | 99.0 |
| MS.gene99244.t1 | AT5G38130 | 26.617 | 402 | 246 | 16 | 23 | 399 | 48 | 425 | 1.02e-21 | 97.8 |
| MS.gene99244.t1 | AT5G42830 | 27.098 | 417 | 253 | 15 | 21 | 402 | 18 | 418 | 1.85e-20 | 94.0 |
| MS.gene99244.t1 | AT5G07870 | 27.147 | 361 | 239 | 10 | 64 | 402 | 72 | 430 | 2.38e-20 | 94.0 |
| MS.gene99244.t1 | AT4G15390 | 24.213 | 413 | 262 | 17 | 3 | 388 | 2 | 390 | 3.00e-20 | 93.2 |
| MS.gene99244.t1 | AT4G15390 | 24.213 | 413 | 262 | 17 | 3 | 388 | 2 | 390 | 3.00e-20 | 93.2 |
| MS.gene99244.t1 | AT1G24430 | 25.547 | 274 | 184 | 6 | 43 | 315 | 41 | 295 | 3.17e-20 | 93.2 |
| MS.gene99244.t1 | AT3G50280 | 25.140 | 358 | 237 | 13 | 64 | 399 | 59 | 407 | 3.54e-20 | 93.2 |
| MS.gene99244.t1 | AT1G65450 | 27.632 | 304 | 179 | 11 | 158 | 440 | 2 | 285 | 3.85e-20 | 90.9 |
| MS.gene99244.t1 | AT3G50270 | 25.698 | 358 | 237 | 11 | 64 | 399 | 62 | 412 | 1.53e-19 | 91.3 |
| MS.gene99244.t1 | AT5G67160 | 24.545 | 440 | 302 | 14 | 13 | 437 | 2 | 426 | 5.32e-19 | 89.4 |
| MS.gene99244.t1 | AT5G47980 | 25.536 | 466 | 278 | 21 | 15 | 447 | 11 | 440 | 4.89e-18 | 86.7 |
| MS.gene99244.t1 | AT3G30280 | 23.227 | 409 | 262 | 17 | 7 | 388 | 4 | 387 | 9.35e-17 | 82.8 |
| MS.gene99244.t1 | AT2G39980 | 24.688 | 401 | 249 | 12 | 53 | 402 | 51 | 449 | 1.75e-15 | 79.0 |
| MS.gene99244.t1 | AT3G23840 | 23.711 | 291 | 174 | 9 | 80 | 353 | 81 | 340 | 1.69e-12 | 69.3 |
| MS.gene99244.t1 | AT5G47950 | 24.679 | 312 | 196 | 12 | 7 | 309 | 4 | 285 | 2.93e-12 | 68.9 |
| MS.gene99244.t1 | AT1G65450 | 33.333 | 147 | 93 | 4 | 7 | 151 | 16 | 159 | 3.41e-12 | 65.1 |
| MS.gene99244.t1 | AT3G29670 | 23.563 | 348 | 231 | 15 | 64 | 387 | 66 | 402 | 6.33e-12 | 67.8 |
Find 0 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAATTTAAAATTTTGTG+GGG | + | 6862:11809-11828 | MS.gene99244:intron | 10.0% |
| !!! | AAATATTTTTTTATAAGGAT+TGG | + | 6862:11495-11514 | MS.gene99244:intron | 10.0% |
| !!! | AAATTTTTTATTAATTGAAG+TGG | + | 6862:12185-12204 | MS.gene99244:intron | 10.0% |
| !!! | TTTAAACCTTATTTTTAATA+TGG | - | 6862:11345-11364 | MS.gene99244:intergenic | 10.0% |
| !! | AAAATGATTCAAATATATTG+TGG | + | 6862:11866-11885 | MS.gene99244:intron | 15.0% |
| !! | ATAAAAAGTAGTATATTTGT+AGG | + | 6862:11588-11607 | MS.gene99244:intron | 15.0% |
| !!! | AAGTTGAAGTAATATTTTAT+AGG | + | 6862:11897-11916 | MS.gene99244:intron | 15.0% |
| !!! | AGTTGAAGTAATATTTTATA+GGG | + | 6862:11898-11917 | MS.gene99244:intron | 15.0% |
| !!! | ATATTTGAATCATTTTTTGA+AGG | - | 6862:11862-11881 | MS.gene99244:intergenic | 15.0% |
| !!! | CAATTTATTTTATCTTTTCA+AGG | + | 6862:11532-11551 | MS.gene99244:intron | 15.0% |
| !!! | TTCAATTCATTTTAACTTTT+AGG | - | 6862:11631-11650 | MS.gene99244:intergenic | 15.0% |
| !! | AAAACTTATTGAAAATCCAT+TGG | + | 6862:12885-12904 | MS.gene99244:CDS | 20.0% |
| !! | CATGTTAAAAAATTGTTACA+AGG | - | 6862:12088-12107 | MS.gene99244:intergenic | 20.0% |
| !! | GATATTACTCTTAAACAATT+TGG | + | 6862:10975-10994 | MS.gene99244:CDS | 20.0% |
| !! | TAGAAAGTTCAAATCTTTAT+GGG | - | 6862:12235-12254 | MS.gene99244:intergenic | 20.0% |
| !! | TATAACAAATGTAACATCAA+AGG | - | 6862:12258-12277 | MS.gene99244:intergenic | 20.0% |
| !! | TGGTTATAAAATTGTATCAA+AGG | - | 6862:10789-10808 | MS.gene99244:intergenic | 20.0% |
| !! | TTTAGGCCATATTAAAAATA+AGG | + | 6862:11336-11355 | MS.gene99244:intron | 20.0% |
| !!! | ATTATTTTAACAAGTGATGA+TGG | - | 6862:11796-11815 | MS.gene99244:intergenic | 20.0% |
| !!! | ATTCCTTTTACAAATGATAA+AGG | + | 6862:13147-13166 | MS.gene99244:CDS | 20.0% |
| ! | AAACTTATGGTTGATTGTAA+TGG | + | 6862:10921-10940 | MS.gene99244:CDS | 25.0% |
| ! | AATCATAAAAGGTTTAAGCT+CGG | - | 6862:11770-11789 | MS.gene99244:intergenic | 25.0% |
| ! | AATCTTTATGGGGTTAAAAA+TGG | - | 6862:12224-12243 | MS.gene99244:intergenic | 25.0% |
| ! | AGAAAGTTCAAATCTTTATG+GGG | - | 6862:12234-12253 | MS.gene99244:intergenic | 25.0% |
| ! | ATGATTCAAATATATTGTGG+TGG | + | 6862:11869-11888 | MS.gene99244:intron | 25.0% |
| ! | GTAGAAAGTTCAAATCTTTA+TGG | - | 6862:12236-12255 | MS.gene99244:intergenic | 25.0% |
| ! | GTCCTTTCAATACTTATTTA+AGG | - | 6862:11432-11451 | MS.gene99244:intergenic | 25.0% |
| ! | TATGCAGTGAATTAAACTTA+AGG | - | 6862:12301-12320 | MS.gene99244:intergenic | 25.0% |
| ! | TCTCCTTTATCATTTGTAAA+AGG | - | 6862:13153-13172 | MS.gene99244:intergenic | 25.0% |
| ! | TGATTCAAATATATTGTGGT+GGG | + | 6862:11870-11889 | MS.gene99244:intron | 25.0% |
| ! | TTATAACCATGATCCAAATA+TGG | + | 6862:10800-10819 | MS.gene99244:CDS | 25.0% |
| !! | AAAATGAATTGAAGCCTTAT+CGG | + | 6862:11638-11657 | MS.gene99244:intron | 25.0% |
| !! | AAAGTTTTCCGATAATATGT+AGG | - | 6862:11119-11138 | MS.gene99244:intergenic | 25.0% |
| !! | AAGTTTTCCGATAATATGTA+GGG | - | 6862:11118-11137 | MS.gene99244:intergenic | 25.0% |
| !! | ACATTTTTATTGAGATCACA+CGG | + | 6862:11188-11207 | MS.gene99244:intron | 25.0% |
| !!! | ATCAAGAGTATTTAAAAGCT+TGG | - | 6862:11671-11690 | MS.gene99244:intergenic | 25.0% |
| !!! | GATGATGGATTAATCATAAA+AGG | - | 6862:11781-11800 | MS.gene99244:intergenic | 25.0% |
| !!! | GTCCTTAAATAAGTATTGAA+AGG | + | 6862:11427-11446 | MS.gene99244:intron | 25.0% |
| !!! | TTATTTTAAAATTGGGCAAG+TGG | + | 6862:12162-12181 | MS.gene99244:intron | 25.0% |
| ACAAATGATAAAGGAGAGAA+AGG | + | 6862:13156-13175 | MS.gene99244:CDS | 30.0% | |
| AGTAACTATTTGGAAGTTGT+TGG | - | 6862:12822-12841 | MS.gene99244:intergenic | 30.0% | |
| CAACTTCCAAATAGTTACTA+TGG | + | 6862:12823-12842 | MS.gene99244:CDS | 30.0% | |
| CACTTTGAATACTAGAGATT+TGG | - | 6862:10664-10683 | MS.gene99244:intergenic | 30.0% | |
| GAAAAGATCAATTGTATACC+TGG | - | 6862:11094-11113 | MS.gene99244:intergenic | 30.0% | |
| GCATTACCATAGTAACTATT+TGG | - | 6862:12832-12851 | MS.gene99244:intergenic | 30.0% | |
| TGCAGCAATGATTTCAAAAT+TGG | - | 6862:12704-12723 | MS.gene99244:intergenic | 30.0% | |
| ! | AAATCATTGCTGCATACTTT+TGG | + | 6862:12710-12729 | MS.gene99244:CDS | 30.0% |
| ! | CTTTTCACCCTACATATTAT+CGG | + | 6862:11108-11127 | MS.gene99244:intron | 30.0% |
| ! | CTTTTCGAATAACATCAACA+GGG | - | 6862:10836-10855 | MS.gene99244:intergenic | 30.0% |
| ! | GCAGATTTTATGGTTATCAA+GGG | + | 6862:12973-12992 | MS.gene99244:CDS | 30.0% |
| !! | AAGAGTATTTAAAAGCTTGG+TGG | - | 6862:11668-11687 | MS.gene99244:intergenic | 30.0% |
| !! | AATTGGAGTATTGTTGCAAT+TGG | - | 6862:12687-12706 | MS.gene99244:intergenic | 30.0% |
| !! | TTGAAGGTGTTATCAATTCA+GGG | - | 6862:10698-10717 | MS.gene99244:intergenic | 30.0% |
| !! | TTTGAAGGTGTTATCAATTC+AGG | - | 6862:10699-10718 | MS.gene99244:intergenic | 30.0% |
| !!! | GGATTTAGAGATGTTGATTT+TGG | + | 6862:13051-13070 | MS.gene99244:CDS | 30.0% |
| !!! | TAGAGATGTTGATTTTGGTT+GGG | + | 6862:13056-13075 | MS.gene99244:CDS | 30.0% |
| !!! | TTAGAGATGTTGATTTTGGT+TGG | + | 6862:13055-13074 | MS.gene99244:CDS | 30.0% |
| AAATTCAATGCATACGCCAA+TGG | - | 6862:12904-12923 | MS.gene99243:intergenic | 35.0% | |
| AACATTAACCAGCCTACTAA+GGG | + | 6862:13255-13274 | MS.gene99244:CDS | 35.0% | |
| AATTTGTGATCACCCTTAGT+AGG | - | 6862:13270-13289 | MS.gene99244:intergenic | 35.0% | |
| ACAACTAGATTCTAACGAAG+AGG | + | 6862:12753-12772 | MS.gene99244:CDS | 35.0% | |
| ACGGGTGTGTATAAGTATAA+GGG | - | 6862:11972-11991 | MS.gene99244:intergenic | 35.0% | |
| ACTAAGGGTGATCACAAATT+TGG | + | 6862:13270-13289 | MS.gene99244:CDS | 35.0% | |
| ATGACCAAGATTCATTACGT+TGG | + | 6862:10757-10776 | MS.gene99244:CDS | 35.0% | |
| ATGGTTGATTGTAATGGTGA+AGG | + | 6862:10927-10946 | MS.gene99244:CDS | 35.0% | |
| CACTGAATGCATATACTCTT+TGG | - | 6862:12953-12972 | MS.gene99244:intergenic | 35.0% | |
| CGATCACAATCAAACACTTA+CGG | - | 6862:11991-12010 | MS.gene99244:intergenic | 35.0% | |
| CGTAAGTGTTTGATTGTGAT+CGG | + | 6862:11989-12008 | MS.gene99244:intron | 35.0% | |
| CTCTAGTATTCAAAGTGAAG+AGG | + | 6862:10667-10686 | MS.gene99244:CDS | 35.0% | |
| GAACTTCTTTATGATGTTCC+AGG | + | 6862:11032-11051 | MS.gene99244:CDS | 35.0% | |
| GATCACAATCAAACACTTAC+GGG | - | 6862:11990-12009 | MS.gene99244:intergenic | 35.0% | |
| GGAAAACTTTGCATTATAGC+CGG | + | 6862:11129-11148 | MS.gene99244:intron | 35.0% | |
| TAAAGAAGTTCATCCAAGCA+AGG | - | 6862:11023-11042 | MS.gene99244:intergenic | 35.0% | |
| TACGGGTGTGTATAAGTATA+AGG | - | 6862:11973-11992 | MS.gene99244:intergenic | 35.0% | |
| TATAATCCCGCAGTAGTTAA+AGG | - | 6862:13006-13025 | MS.gene99244:intergenic | 35.0% | |
| TATACCTGGATAAGTAGCAA+TGG | - | 6862:11080-11099 | MS.gene99244:intergenic | 35.0% | |
| TATTGTTGCAATTGGTGAGT+TGG | - | 6862:12679-12698 | MS.gene99244:intergenic | 35.0% | |
| TCAACCATAAGTTTCCTACT+AGG | - | 6862:10915-10934 | MS.gene99244:intergenic | 35.0% | |
| TGATAAAGGAGAGAAAGGTT+TGG | + | 6862:13161-13180 | MS.gene99244:CDS | 35.0% | |
| TTAATCACATCTGAAGAACC+TGG | - | 6862:11053-11072 | MS.gene99244:intergenic | 35.0% | |
| TTTACTATCCATTTGCAGGT+AGG | + | 6862:10877-10896 | MS.gene99244:CDS | 35.0% | |
| ! | AAACATGGTTCCTTTGTTGT+CGG | - | 6862:12584-12603 | MS.gene99244:intergenic | 35.0% |
| ! | CAAAGAGTATATGCATTCAG+TGG | + | 6862:12951-12970 | MS.gene99244:CDS | 35.0% |
| ! | GAAAGCGTAAAAATCATGAC+CGG | - | 6862:11151-11170 | MS.gene99244:intergenic | 35.0% |
| ! | GCTTTTCGAATAACATCAAC+AGG | - | 6862:10837-10856 | MS.gene99244:intergenic | 35.0% |
| ! | GGCAGATTTTATGGTTATCA+AGG | + | 6862:12972-12991 | MS.gene99244:CDS | 35.0% |
| ! | GTGTTTTACTATCCATTTGC+AGG | + | 6862:10873-10892 | MS.gene99244:CDS | 35.0% |
| !! | ACTTGAGTTGGCAAAAAAAC+TGG | - | 6862:13192-13211 | MS.gene99244:intergenic | 35.0% |
| !!! | AGAGATGTTGATTTTGGTTG+GGG | + | 6862:13057-13076 | MS.gene99244:CDS | 35.0% |
| !!! | AGTTTTGTTTCATGAGGTGT+GGG | - | 6862:10723-10742 | MS.gene99244:intergenic | 35.0% |
| !!! | CTTCAATTTTTGAGTGCCTT+AGG | + | 6862:12442-12461 | MS.gene99244:CDS | 35.0% |
| !!! | GAGAGTAGTTTTGTTTCATG+AGG | - | 6862:10729-10748 | MS.gene99244:intergenic | 35.0% |
| !!! | TAGTTTTGTTTCATGAGGTG+TGG | - | 6862:10724-10743 | MS.gene99244:intergenic | 35.0% |
| !!! | TTTTTTGCCAACTCAAGTCA+TGG | + | 6862:13194-13213 | MS.gene99244:CDS | 35.0% |
| AACCATGATCCAAATATGGC+AGG | + | 6862:10804-10823 | MS.gene99244:CDS | 40.0% | |
| ACCATGATCCAAATATGGCA+GGG | + | 6862:10805-10824 | MS.gene99244:CDS | 40.0% | |
| AGATAAAACCACCACACTTG+AGG | - | 6862:12378-12397 | MS.gene99244:intergenic | 40.0% | |
| AGGTCCTAGTAGGAAACTTA+TGG | + | 6862:10908-10927 | MS.gene99244:CDS | 40.0% | |
| AGTTCATCCAAGCAAGGAAA+TGG | - | 6862:11017-11036 | MS.gene99244:intergenic | 40.0% | |
| ATATGAAAGACAGCTTGACC+AGG | - | 6862:13129-13148 | MS.gene99244:intergenic | 40.0% | |
| ATCCATTTGCAGGTAGGTTA+AGG | + | 6862:10883-10902 | MS.gene99244:CDS | 40.0% | |
| CAACATTAACCAGCCTACTA+AGG | + | 6862:13254-13273 | MS.gene99244:CDS | 40.0% | |
| CACAAACACATCGAAACGAA+AGG | - | 6862:11260-11279 | MS.gene99244:intergenic | 40.0% | |
| CATACATTGAGTGATGCATC+AGG | + | 6862:12415-12434 | MS.gene99244:CDS | 40.0% | |
| CGATGAGTAAATGTCACTCT+TGG | - | 6862:12544-12563 | MS.gene99244:intergenic | 40.0% | |
| CTGATGCATCACTCAATGTA+TGG | - | 6862:12417-12436 | MS.gene99244:intergenic | 40.0% | |
| CTTGAATTGTAACTACGTGC+AGG | + | 6862:12345-12364 | MS.gene99244:intron | 40.0% | |
| CTTGCCAACGTAATGAATCT+TGG | - | 6862:10764-10783 | MS.gene99244:intergenic | 40.0% | |
| GAGTAAACCTTCAATCTCAC+CGG | + | 6862:12483-12502 | MS.gene99244:CDS | 40.0% | |
| TCCATTTGCAGGTAGGTTAA+GGG | + | 6862:10884-10903 | MS.gene99244:CDS | 40.0% | |
| TGAGTAAATGTCACTCTTGG+TGG | - | 6862:12541-12560 | MS.gene99244:intergenic | 40.0% | |
| ! | AACATGGTTCCTTTGTTGTC+GGG | - | 6862:12583-12602 | MS.gene99244:intergenic | 40.0% |
| ! | GCATTCAGTGGCAGATTTTA+TGG | + | 6862:12963-12982 | MS.gene99244:CDS | 40.0% |
| !! | AACAGATTTGCTACGTGCAT+CGG | - | 6862:12797-12816 | MS.gene99244:intergenic | 40.0% |
| !!! | GAGATGTTGATTTTGGTTGG+GGG | + | 6862:13058-13077 | MS.gene99244:CDS | 40.0% |
| AACCTCTCCATGACTTGAGT+TGG | - | 6862:13204-13223 | MS.gene99244:intergenic | 45.0% | |
| AACTCAAGTCATGGAGAGGT+TGG | + | 6862:13203-13222 | MS.gene99244:CDS | 45.0% | |
| AATCCCGCAGTAGTTAAAGG+AGG | - | 6862:13003-13022 | MS.gene99244:intergenic | 45.0% | |
| CAGAGAGCTTCTTAACGCAA+GGG | + | 6862:12513-12532 | MS.gene99244:CDS | 45.0% | |
| CATGTCGTCTAAGGGAAACA+TGG | - | 6862:12599-12618 | MS.gene99244:intergenic | 45.0% | |
| CATGTTTCCCTTAGACGACA+TGG | + | 6862:12597-12616 | MS.gene99244:CDS | 45.0% | |
| GTTCACCGCACTTTCTTCAT+TGG | + | 6862:12619-12638 | MS.gene99244:CDS | 45.0% | |
| GTTTATGGAGGACCAGCTAA+AGG | + | 6862:13087-13106 | MS.gene99244:CDS | 45.0% | |
| TACGCTTTCACGTTGTCTCT+AGG | + | 6862:11162-11181 | MS.gene99244:intron | 45.0% | |
| TCATCCAAGCAAGGAAATGG+AGG | - | 6862:11014-11033 | MS.gene99244:intergenic | 45.0% | |
| TCATCCTCCATTTCCTTGCT+TGG | + | 6862:11007-11026 | MS.gene99244:CDS | 45.0% | |
| TCCCTGCCATATTTGGATCA+TGG | - | 6862:10809-10828 | MS.gene99244:intergenic | 45.0% | |
| TCCCTTAACCTACCTGCAAA+TGG | - | 6862:10888-10907 | MS.gene99244:intergenic | 45.0% | |
| TCGTCCTCCTTTAACTACTG+CGG | + | 6862:12996-13015 | MS.gene99244:CDS | 45.0% | |
| TGGGACCAATGAAGAAAGTG+CGG | - | 6862:12627-12646 | MS.gene99244:intergenic | 45.0% | |
| TTTGCAGGTAGGTTAAGGGA+AGG | + | 6862:10888-10907 | MS.gene99244:CDS | 45.0% | |
| ! | AGCTTGGTGGTATTCCGATA+AGG | - | 6862:11655-11674 | MS.gene99244:intergenic | 45.0% |
| ! | CACTCCATTGCTACTTATCC+AGG | + | 6862:11073-11092 | MS.gene99244:CDS | 45.0% |
| ! | GGAGAGGTTGGTTAAAGAGT+TGG | + | 6862:13215-13234 | MS.gene99244:CDS | 45.0% |
| ! | GTTGCAATTGGTGAGTTGGA+AGG | - | 6862:12675-12694 | MS.gene99244:intergenic | 45.0% |
| !! | TCATGAGGTGTGGGTTTTGA+AGG | - | 6862:10714-10733 | MS.gene99244:intergenic | 45.0% |
| !!! | AAAATAATTTAAAATTTTGT+GGG | + | 6862:11808-11827 | MS.gene99244:intron | 5.0% |
| !!! | ACATAAAATATTTTTTTATA+AGG | + | 6862:11490-11509 | MS.gene99244:intron | 5.0% |
| !!! | ACTAAAATTTTAAATTTTAT+AGG | + | 6862:11928-11947 | MS.gene99244:intron | 5.0% |
| !!! | ATTTTATATCATTTAATTTT+AGG | + | 6862:11319-11338 | MS.gene99244:intron | 5.0% |
| !!! | CAAATTTTTATTTTAAAATT+GGG | + | 6862:12155-12174 | MS.gene99244:intron | 5.0% |
| !!! | TAAAATAATTTAAAATTTTG+TGG | + | 6862:11807-11826 | MS.gene99244:intron | 5.0% |
| !!! | TATAAAAAAATATTTTATGT+TGG | - | 6862:11490-11509 | MS.gene99244:intergenic | 5.0% |
| !!! | TCAAATTTTTATTTTAAAAT+TGG | + | 6862:12154-12173 | MS.gene99244:intron | 5.0% |
| !!! | TTTTAAAATAAAAATTTGAT+AGG | - | 6862:12153-12172 | MS.gene99244:intergenic | 5.0% |
| AACCTTCAATCTCACCGGTG+TGG | + | 6862:12488-12507 | MS.gene99244:CDS | 50.0% | |
| AGAGCGAATTGCAGCTACCT+CGG | - | 6862:12650-12669 | MS.gene99244:intergenic | 50.0% | |
| ATGGAGGACCAGCTAAAGGA+GGG | + | 6862:13091-13110 | MS.gene99244:CDS | 50.0% | |
| CCTTAGGAGAGATATCTCGC+GGG | + | 6862:12458-12477 | MS.gene99244:CDS | 50.0% | |
| CGGTGAACCATGTCGTCTAA+GGG | - | 6862:12607-12626 | MS.gene99244:intergenic | 50.0% | |
| CGTCCTCCTTTAACTACTGC+GGG | + | 6862:12997-13016 | MS.gene99244:CDS | 50.0% | |
| GAACCAGAACCCGACAACAA+AGG | + | 6862:12571-12590 | MS.gene99244:CDS | 50.0% | |
| GCAGAGAGCTTCTTAACGCA+AGG | + | 6862:12512-12531 | MS.gene99244:CDS | 50.0% | |
| GCCTTAGGAGAGATATCTCG+CGG | + | 6862:12457-12476 | MS.gene99244:CDS | 50.0% | |
| GGGTCTTTCCCTGCCATATT+TGG | - | 6862:10816-10835 | MS.gene99244:intergenic | 50.0% | |
| GGTTAAGGGAAGGTCCTAGT+AGG | + | 6862:10898-10917 | MS.gene99244:CDS | 50.0% | |
| GGTTGGGGGAAAGCTGTTTA+TGG | + | 6862:13072-13091 | MS.gene99244:CDS | 50.0% | |
| GTGTCTGATGTTACACGTGC+TGG | + | 6862:13030-13049 | MS.gene99244:CDS | 50.0% | |
| TATGGAGGACCAGCTAAAGG+AGG | + | 6862:13090-13109 | MS.gene99244:CDS | 50.0% | |
| TCCTGCAGTTGTAACCGCAA+CGG | - | 6862:12866-12885 | MS.gene99244:intergenic | 50.0% | |
| TGCCAACTCAAGTCATGGAG+AGG | + | 6862:13199-13218 | MS.gene99244:CDS | 50.0% | |
| TGCTTTAGCGTTTCCCGTTG+CGG | + | 6862:12849-12868 | MS.gene99244:CDS | 50.0% | |
| TGGGGGAAAGCTGTTTATGG+AGG | + | 6862:13075-13094 | MS.gene99244:CDS | 50.0% | |
| TGTGATCACCCTTAGTAGGC+TGG | - | 6862:13266-13285 | MS.gene99244:intergenic | 50.0% | |
| TTTCTTCATTGGTCCCACCG+AGG | + | 6862:12630-12649 | MS.gene99244:CDS | 50.0% | |
| ! | GTTCCTTTGTTGTCGGGTTC+TGG | - | 6862:12577-12596 | MS.gene99244:intergenic | 50.0% |
| AGAAGCTCTCTGCTCCACAC+CGG | - | 6862:12505-12524 | MS.gene99244:intergenic | 55.0% | |
| CAGGTAACACGCCTCAAGTG+TGG | + | 6862:12364-12383 | MS.gene99244:intron | 55.0% | |
| CCCGCGAGATATCTCTCCTA+AGG | - | 6862:12461-12480 | MS.gene99244:intergenic | 55.0% | |
| CCTGCAGTTGTAACCGCAAC+GGG | - | 6862:12865-12884 | MS.gene99244:intergenic | 55.0% | |
| CGAATTGCAGCTACCTCGGT+GGG | - | 6862:12646-12665 | MS.gene99244:intergenic | 55.0% | |
| CTCCACACCGGTGAGATTGA+AGG | - | 6862:12493-12512 | MS.gene99244:intergenic | 55.0% | |
| GCGGTGAACCATGTCGTCTA+AGG | - | 6862:12608-12627 | MS.gene99244:intergenic | 55.0% | |
| GTAACACGCCTCAAGTGTGG+TGG | + | 6862:12367-12386 | MS.gene99244:CDS | 55.0% | |
| TGGAGGACCAGCTAAAGGAG+GGG | + | 6862:13092-13111 | MS.gene99244:CDS | 55.0% | |
| CCCGTTGCGGTTACAACTGC+AGG | + | 6862:12862-12881 | MS.gene99244:CDS | 60.0% | |
| GCACCATCCCCTCCTTTAGC+TGG | - | 6862:13102-13121 | MS.gene99244:intergenic | 60.0% | |
| GCGAATTGCAGCTACCTCGG+TGG | - | 6862:12647-12666 | MS.gene99244:intergenic | 60.0% | |
| GGACCAGCTAAAGGAGGGGA+TGG | + | 6862:13096-13115 | MS.gene99244:CDS | 60.0% | |
| GGAGGGGATGGTGCTCTTCC+TGG | + | 6862:13108-13127 | MS.gene99244:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 6862 | gene | 10657 | 13314 | 10657 | ID=MS.gene99244 |
| 6862 | mRNA | 10657 | 13314 | 10657 | ID=MS.gene99244.t1;Parent=MS.gene99244 |
| 6862 | exon | 10657 | 11094 | 10657 | ID=MS.gene99244.t1.exon1;Parent=MS.gene99244.t1 |
| 6862 | CDS | 10657 | 11094 | 10657 | ID=cds.MS.gene99244.t1;Parent=MS.gene99244.t1 |
| 6862 | exon | 12367 | 13314 | 12367 | ID=MS.gene99244.t1.exon2;Parent=MS.gene99244.t1 |
| 6862 | CDS | 12367 | 13314 | 12367 | ID=cds.MS.gene99244.t1;Parent=MS.gene99244.t1 |
| Gene Sequence |
| Protein sequence |
