AlfalfaGEDB | MsG0180005281.01

M. sativa cultivar ZhongmuNo.1 / MsG0180005281.01

KEGG: -
GO: GO:0008168 GO:0008171 GO:0046983
PFAM: PF00891 PF08100

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005281.01.T01	AFK37032.1	96.939	98	3	0	97	194	15	112	1.29E-63	202

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005281.01.T01	P93324	100	98	0	0	97	194	275	372	1.72E-66	211

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005281.01.T01	I3S9U0	96.939	98	3	0	97	194	15	112	6.16e-64	202

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048134.01	MsG0180005281.01	0.815539	8.779725e-52	6.069989e-49
MsG0080048889.01	MsG0180005281.01	0.806138	9.514292e-50	5.124789e-47
MsG0180001029.01	MsG0180005281.01	0.801434	9.020198e-49	4.307300e-46
MsG0180001797.01	MsG0180005281.01	0.805519	1.283925e-49	6.806506e-47
MsG0180001800.01	MsG0180005281.01	0.831049	2.080054e-55	2.231361e-52
MsG0180005281.01	MsG0280006546.01	0.800707	1.270102e-48	5.954174e-46
MsG0180005281.01	MsG0280007678.01	0.801563	8.489409e-49	4.066980e-46
MsG0180005281.01	MsG0280009657.01	0.801029	1.091749e-48	5.160658e-46
MsG0180005281.01	MsG0280010539.01	0.824308	8.660944e-54	7.642289e-51
MsG0180005281.01	MsG0280011236.01	0.807816	4.201508e-50	2.363290e-47
MsG0180005281.01	MsG0380015660.01	0.814831	1.260718e-51	8.549376e-49
MsG0180005281.01	MsG0380015711.01	0.807216	5.634175e-50	3.120055e-47
MsG0180005281.01	MsG0380016299.01	0.820684	6.023211e-53	4.798153e-50
MsG0180005281.01	MsG0380016300.01	0.812003	5.275763e-51	3.315141e-48
MsG0180005281.01	MsG0380017901.01	0.804273	2.337616e-49	1.200183e-46
MsG0180005281.01	MsG0480019146.01	0.847472	1.131857e-59	2.014060e-56
MsG0180005281.01	MsG0480019301.01	0.810790	9.675842e-51	5.887616e-48
MsG0180005281.01	MsG0480019346.01	0.801771	7.693792e-49	3.705233e-46
MsG0180005281.01	MsG0480019348.01	0.805374	1.376578e-49	7.270931e-47
MsG0180005281.01	MsG0480022428.01	0.812986	3.216342e-51	2.074751e-48
MsG0180005281.01	MsG0580024087.01	0.818404	1.995305e-52	1.492267e-49
MsG0180005281.01	MsG0580025590.01	0.819747	9.874797e-53	7.664875e-50
MsG0180005281.01	MsG0580025961.01	0.813990	1.934608e-51	1.282397e-48
MsG0180005281.01	MsG0580027751.01	0.816291	5.964633e-52	4.209809e-49
MsG0180005281.01	MsG0580027752.01	0.800021	1.751845e-48	8.071162e-46
MsG0180005281.01	MsG0580027753.01	0.809240	2.087019e-50	1.218941e-47
MsG0180005281.01	MsG0580029937.01	0.800418	1.454570e-48	6.769733e-46
MsG0180005281.01	MsG0580029938.01	0.815303	9.906459e-52	6.804532e-49
MsG0180005281.01	MsG0680031200.01	0.809477	1.855596e-50	1.090600e-47
MsG0180005281.01	MsG0780036208.01	0.806492	8.011861e-50	4.354647e-47
MsG0180005281.01	MsG0780036649.01	0.813635	2.317109e-51	1.521260e-48
MsG0180005281.01	MsG0780036839.01	0.828717	7.698348e-55	7.713751e-52
MsG0180005281.01	MsG0780038305.01	0.808008	3.824830e-50	2.162320e-47
MsG0180005281.01	MsG0780038519.01	0.837017	6.661572e-57	8.542884e-54
MsG0180005281.01	MsG0780039237.01	0.806664	7.370193e-50	4.023285e-47
MsG0180005281.01	MsG0780039979.01	0.807812	4.209526e-50	2.367581e-47
MsG0180005281.01	MsG0780040498.01	0.812431	4.254521e-51	2.704752e-48
MsG0180005281.01	MsG0780041248.01	0.823165	1.604150e-53	1.370632e-50
MsG0180005281.01	MsG0880043217.01	0.803858	2.851843e-49	1.448715e-46
MsG0180005281.01	MsG0880044026.01	0.810325	1.218982e-50	7.325948e-48
MsG0180005281.01	MsG0880047383.01	0.822942	1.808197e-53	1.535309e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005281.01.T01	MTR_1g096310	68.354	158	34	4	37	194	231	372	1.69e-67	211
MsG0180005281.01.T01	MTR_1g096310	93.878	98	6	0	1	98	1	98	1.31e-58	188
MsG0180005281.01.T01	MTR_7g011900	48.101	158	66	3	37	194	229	370	4.15e-44	150
MsG0180005281.01.T01	MTR_7g011900	65.625	96	30	2	1	96	1	93	3.34e-30	114
MsG0180005281.01.T01	MTR_7g012040	50.000	158	63	4	37	194	227	368	3.56e-43	148
MsG0180005281.01.T01	MTR_7g012040	65.169	89	28	2	8	96	7	92	1.99e-28	109
MsG0180005281.01.T01	MTR_7g012070	48.734	158	65	4	37	194	234	375	3.55e-42	145
MsG0180005281.01.T01	MTR_7g012070	53.535	99	42	2	1	96	1	98	5.29e-24	97.4
MsG0180005281.01.T01	MTR_7g012090	49.057	159	63	4	37	194	234	375	3.66e-42	145
MsG0180005281.01.T01	MTR_7g012090	54.545	99	41	2	1	96	1	98	8.29e-25	99.8
MsG0180005281.01.T01	MTR_2g055940	47.799	159	65	5	37	194	222	363	1.58e-41	144
MsG0180005281.01.T01	MTR_2g055940	64.474	76	23	2	21	96	15	86	3.41e-19	84.3
MsG0180005281.01.T01	MTR_7g011990	45.283	159	69	5	37	194	226	367	2.25e-38	135
MsG0180005281.01.T01	MTR_7g011990	62.921	89	26	2	8	96	8	89	2.11e-25	101
MsG0180005281.01.T01	MTR_1g036460	58.163	98	40	1	98	194	273	370	2.74e-36	130
MsG0180005281.01.T01	MTR_1g036460	52.174	92	39	3	7	96	5	93	3.34e-16	75.9
MsG0180005281.01.T01	MTR_1g036490	57.143	98	41	1	98	194	273	370	5.26e-36	129
MsG0180005281.01.T01	MTR_1g036490	50.000	90	41	2	9	96	6	93	9.39e-17	77.4
MsG0180005281.01.T01	MTR_7g012020	43.671	158	73	5	37	194	228	369	8.92e-36	129
MsG0180005281.01.T01	MTR_7g012020	52.893	121	48	4	8	126	7	120	6.87e-29	110
MsG0180005281.01.T01	MTR_3g021430	61.224	98	37	1	97	194	261	357	1.14e-35	128
MsG0180005281.01.T01	MTR_3g021430	54.839	93	37	4	16	106	4	93	3.42e-19	84.0
MsG0180005281.01.T01	MTR_1g036510	55.102	98	43	1	98	194	287	384	1.59e-34	125
MsG0180005281.01.T01	MTR_1g036510	49.474	95	36	3	12	96	15	107	1.67e-14	71.2
MsG0180005281.01.T01	MTR_3g021440	55.102	98	43	1	97	194	274	370	2.81e-33	122
MsG0180005281.01.T01	MTR_3g021440	54.545	88	35	4	21	106	22	106	2.01e-19	84.7
MsG0180005281.01.T01	MTR_7g012020	52.893	121	48	4	8	126	7	120	5.40e-30	111
MsG0180005281.01.T01	MTR_7g012020	52.893	121	48	4	8	126	7	120	1.11e-29	111
MsG0180005281.01.T01	MTR_3g092900	50.000	98	47	2	98	194	267	363	6.79e-28	107
MsG0180005281.01.T01	MTR_3g092900	49.425	87	40	3	10	96	6	88	7.47e-13	66.2
MsG0180005281.01.T01	MTR_5g098170	48.980	98	48	2	98	194	267	363	7.76e-26	102
MsG0180005281.01.T01	MTR_5g098170	47.368	76	38	2	20	95	14	87	2.93e-11	61.6
MsG0180005281.01.T01	MTR_8g068760	31.193	218	97	5	26	194	20	233	8.94e-26	99.8
MsG0180005281.01.T01	MTR_1g050220	51.220	82	40	0	96	177	206	287	1.86e-25	100
MsG0180005281.01.T01	MTR_1g050220	54.795	73	29	2	26	96	6	76	1.91e-14	70.5
MsG0180005281.01.T01	MTR_6g060290	45.652	138	52	6	8	127	8	140	6.66e-22	87.8
MsG0180005281.01.T01	MTR_7g118300	44.898	98	52	2	98	194	279	375	2.97e-21	90.1
MsG0180005281.01.T01	MTR_8g024160	42.857	98	54	2	98	194	232	328	5.13e-19	83.2
MsG0180005281.01.T01	MTR_8g068730	39.796	98	57	2	98	194	249	345	1.32e-18	82.4
MsG0180005281.01.T01	MTR_7g118320	37.755	98	59	2	98	194	266	362	3.18e-17	78.6
MsG0180005281.01.T01	MTR_8g068750	38.776	98	58	2	98	194	281	377	5.61e-17	78.2
MsG0180005281.01.T01	MTR_0591s0010	40.816	98	56	2	98	194	281	377	1.91e-16	76.6
MsG0180005281.01.T01	MTR_8g068690	39.394	99	58	2	97	194	279	376	2.41e-16	76.3
MsG0180005281.01.T01	MTR_8g068870	38.776	98	58	2	98	194	267	363	1.18e-15	74.3
MsG0180005281.01.T01	MTR_1g036510	49.474	95	36	3	12	96	15	107	9.85e-15	71.2
MsG0180005281.01.T01	MTR_1g036510	49.474	95	36	3	12	96	15	107	9.86e-15	70.9
MsG0180005281.01.T01	MTR_4g088340	34.615	104	64	2	93	193	230	332	2.37e-14	70.5
MsG0180005281.01.T01	MTR_4g088345	36.471	85	51	1	98	179	258	342	2.40e-14	70.5
MsG0180005281.01.T01	MTR_6g078850	32.990	97	63	2	98	193	287	382	2.76e-14	70.9
MsG0180005281.01.T01	MTR_5g074610	35.294	85	52	1	98	179	228	312	4.99e-14	69.3
MsG0180005281.01.T01	MTR_8g068580	40.217	92	53	2	104	194	43	133	1.29e-13	65.1
MsG0180005281.01.T01	MTR_4g025570	31.325	166	80	6	39	174	38	199	3.35e-13	65.9
MsG0180005281.01.T01	MTR_5g074680	38.202	89	47	3	98	180	261	347	4.90e-13	67.0
MsG0180005281.01.T01	MTR_5g074580	35.955	89	49	3	98	180	261	347	9.73e-13	65.9
MsG0180005281.01.T01	MTR_7g024520	35.294	85	52	1	98	179	252	336	1.43e-12	65.5
MsG0180005281.01.T01	MTR_5g074600	37.079	89	48	3	98	180	260	346	1.78e-12	65.1
MsG0180005281.01.T01	MTR_3g083620	38.824	85	49	2	98	179	263	347	5.74e-12	63.9
MsG0180005281.01.T01	MTR_3g096070	37.000	100	50	4	102	194	242	335	1.92e-11	62.0
MsG0180005281.01.T01	MTR_5g074540	33.333	102	59	4	98	193	242	340	3.85e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005281.01.T01	AT5G54160	49.438	89	44	1	98	185	265	353	4.09e-25	100
MsG0180005281.01.T01	AT5G54160	50.602	83	35	3	20	101	15	92	1.05e-13	68.9
MsG0180005281.01.T01	AT1G62900	42.424	99	54	3	98	194	108	205	1.19e-19	82.8
MsG0180005281.01.T01	AT1G77520	43.434	99	53	3	98	194	284	381	1.29e-19	85.5
MsG0180005281.01.T01	AT1G63140	42.424	99	54	3	98	194	304	401	5.23e-19	84.0
MsG0180005281.01.T01	AT1G63140	42.424	99	54	3	98	194	284	381	6.21e-19	83.6
MsG0180005281.01.T01	AT1G21110	38.384	99	58	3	98	194	276	373	8.60e-19	83.2
MsG0180005281.01.T01	AT1G21110	39.655	116	58	3	26	129	27	142	7.84e-13	66.2
MsG0180005281.01.T01	AT1G21100	36.364	99	60	3	98	194	276	373	7.11e-18	80.5
MsG0180005281.01.T01	AT1G21100	41.584	101	44	2	26	125	27	113	2.40e-13	67.8
MsG0180005281.01.T01	AT1G51990	34.746	118	70	4	79	193	248	361	2.07e-17	79.3
MsG0180005281.01.T01	AT1G51990	34.746	118	70	4	79	193	248	361	2.24e-17	79.3
MsG0180005281.01.T01	AT1G33030	41.000	100	53	3	98	194	254	350	2.92e-17	79.0
MsG0180005281.01.T01	AT1G21130	35.354	99	61	3	98	194	276	373	4.46e-17	78.6
MsG0180005281.01.T01	AT1G21130	48.193	83	41	2	26	106	27	109	9.21e-14	68.9
MsG0180005281.01.T01	AT1G77530	43.434	99	53	3	98	194	284	381	5.23e-17	78.2
MsG0180005281.01.T01	AT1G21120	35.354	99	61	3	98	194	276	373	1.63e-16	77.0
MsG0180005281.01.T01	AT1G21120	48.649	74	37	1	26	98	27	100	8.55e-13	66.2
MsG0180005281.01.T01	AT1G21120	35.354	99	61	3	98	194	324	421	3.37e-16	76.3
MsG0180005281.01.T01	AT1G21120	48.649	74	37	1	26	98	75	148	6.72e-13	66.6
MsG0180005281.01.T01	AT5G53810	38.384	99	58	3	98	194	281	378	3.63e-16	75.9
MsG0180005281.01.T01	AT5G37170	31.677	161	89	7	37	194	44	186	5.19e-16	72.8
MsG0180005281.01.T01	AT5G37170	31.677	161	89	7	37	194	92	234	1.26e-15	72.8
MsG0180005281.01.T01	AT1G76790	37.374	99	59	3	98	194	268	365	3.47e-15	73.2
MsG0180005281.01.T01	AT5G37170	31.677	161	89	7	37	194	192	334	5.53e-15	72.4
MsG0180005281.01.T01	AT1G21130	39.655	116	58	3	26	129	27	142	4.98e-14	69.3
MsG0180005281.01.T01	AT4G35150	37.374	99	51	5	98	187	220	316	4.73e-12	63.9
MsG0180005281.01.T01	AT4G35160	38.462	91	47	4	98	179	277	367	4.82e-11	61.2

Find 34 sgRNAs with CRISPR-Local

Find 46 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCACTTGTGTTTGGTTCTTC+TGG	0.194077	1:-89599707	None:intergenic
ACGGCAAGCAACTTGAAATT+TGG	0.263471	1:-89599837	None:intergenic
GTTCTGAGGTAACACTAATT+TGG	0.264949	1:-89599137	None:intergenic
TGCCGTGCTTTCAACAGTTT+GGG	0.308799	1:+89599854	MsG0180005281.01.T01:CDS
TTGCCGTGCTTTCAACAGTT+TGG	0.318040	1:+89599853	MsG0180005281.01.T01:CDS
TTAGATTCTTCACTTGTGTT+TGG	0.326373	1:-89599716	None:intergenic
TGTAGGCTGTATGCCATAAT+TGG	0.348746	1:+89599597	MsG0180005281.01.T01:intron
AGCACTCGGACTTGCCTAAT+AGG	0.390804	1:+89599334	MsG0180005281.01.T01:CDS
GTTATCCTCCTTGGTAATGT+AGG	0.401834	1:-89599115	None:intergenic
AGCATGCGGTCAAGCCTATT+AGG	0.413248	1:-89599348	None:intergenic
ACTAATTTGGTTATCCTCCT+TGG	0.424947	1:-89599124	None:intergenic
CACAAAGCTTTATCACCAAA+TGG	0.430052	1:+89599656	MsG0180005281.01.T01:CDS
GAGAAATTGAGCAAACTCTC+TGG	0.445194	1:+89599809	MsG0180005281.01.T01:CDS
ATAGCAGCATTTAACACTGC+TGG	0.468445	1:-89599216	None:intergenic
CTCATGTTTATCACAGTTGG+TGG	0.480360	1:+89599761	MsG0180005281.01.T01:CDS
AATCTCATGTTTATCACAGT+TGG	0.506086	1:+89599758	MsG0180005281.01.T01:CDS
TGCTGGATAAACAAGATTAG+TGG	0.509486	1:-89599199	None:intergenic
TTTATTTGAGATCATAGCTA+AGG	0.511778	1:+89599248	MsG0180005281.01.T01:CDS
TTTCAACAGTTTGGGAGTGA+TGG	0.524643	1:+89599862	MsG0180005281.01.T01:CDS
TGTTTATCACAGTTGGTGGA+AGG	0.529690	1:+89599765	MsG0180005281.01.T01:CDS
TCCGAGTGCTGCGTTGATGC+TGG	0.530284	1:-89599321	None:intergenic
GTTTATCACAGTTGGTGGAA+GGG	0.544261	1:+89599766	MsG0180005281.01.T01:CDS
ACCAGCATCAACGCAGCACT+CGG	0.557596	1:+89599320	MsG0180005281.01.T01:CDS
ATAGCTAAGGCAACACCACC+TGG	0.567142	1:+89599261	MsG0180005281.01.T01:CDS
CTCCCAAACTGTTGAAAGCA+CGG	0.568203	1:-89599856	None:intergenic
AATTTAGAAGCAATTTCAGA+TGG	0.568884	1:-89599297	None:intergenic
ACTGTCTTCAGTTTGTTCTG+AGG	0.589302	1:-89599151	None:intergenic
CAGTGCATGTCTTTCAGCAA+TGG	0.602261	1:+89599170	MsG0180005281.01.T01:CDS
AAATGGAAAAGTGATTATTG+TGG	0.620942	1:+89599673	MsG0180005281.01.T01:CDS
GATGGTGACATGAAAGCACC+AGG	0.624085	1:-89599279	None:intergenic
TAGCAAGCAAACGCAGCATG+CGG	0.640854	1:-89599362	None:intergenic
GGGAAATTCCTACATTACCA+AGG	0.642464	1:+89599107	MsG0180005281.01.T01:CDS
AAATTCCTACATTACCAAGG+AGG	0.730361	1:+89599110	MsG0180005281.01.T01:CDS
GGTGACATGAAAGCACCAGG+TGG	0.810388	1:-89599276	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAATGGAAAAGTGATTATTG+TGG	+	Chr1:89599673-89599692	MsG0180005281.01.T01:CDS	25.0%
!	AATTTAGAAGCAATTTCAGA+TGG	-	Chr1:89599300-89599319	None:intergenic	25.0%
!	TGCTAGTTATTCTGTTAAAA+GGG	+	Chr1:89599380-89599399	MsG0180005281.01.T01:intron	25.0%
!	TTGCTAGTTATTCTGTTAAA+AGG	+	Chr1:89599379-89599398	MsG0180005281.01.T01:intron	25.0%
!!	ATTTTTCATCTGACCAATTA+TGG	-	Chr1:89599613-89599632	None:intergenic	25.0%
!!	GACTTTGTTTACATAATTGT+AGG	+	Chr1:89599580-89599599	MsG0180005281.01.T01:intron	25.0%
!!	TTTATTTGAGATCATAGCTA+AGG	+	Chr1:89599248-89599267	MsG0180005281.01.T01:CDS	25.0%
!!!	ACAATAATCACTTTTCCATT+TGG	-	Chr1:89599674-89599693	None:intergenic	25.0%
	AATCTCATGTTTATCACAGT+TGG	+	Chr1:89599758-89599777	MsG0180005281.01.T01:CDS	30.0%
	TATACTTACCTTCAGTATCA+TGG	-	Chr1:89599455-89599474	None:intergenic	30.0%
	TTAGATTCTTCACTTGTGTT+TGG	-	Chr1:89599719-89599738	None:intergenic	30.0%
	AAATTCCTACATTACCAAGG+AGG	+	Chr1:89599110-89599129	MsG0180005281.01.T01:CDS	35.0%
	ACTAATTTGGTTATCCTCCT+TGG	-	Chr1:89599127-89599146	None:intergenic	35.0%
	TGCTGGATAAACAAGATTAG+TGG	-	Chr1:89599202-89599221	None:intergenic	35.0%
	TTAAAAGGGATTGAGCATGT+TGG	+	Chr1:89599394-89599413	MsG0180005281.01.T01:intron	35.0%
!	CACAAAGCTTTATCACCAAA+TGG	+	Chr1:89599656-89599675	MsG0180005281.01.T01:CDS	35.0%
!!	GTTCTGAGGTAACACTAATT+TGG	-	Chr1:89599140-89599159	None:intergenic	35.0%
	ACGGCAAGCAACTTGAAATT+TGG	-	Chr1:89599840-89599859	None:intergenic	40.0%
	ATAGCAGCATTTAACACTGC+TGG	-	Chr1:89599219-89599238	None:intergenic	40.0%
	ATGTTTGCAAGTGTTCCACA+GGG	+	Chr1:89599424-89599443	MsG0180005281.01.T01:intron	40.0%
	CTCATGTTTATCACAGTTGG+TGG	+	Chr1:89599761-89599780	MsG0180005281.01.T01:CDS	40.0%
	GAGAAATTGAGCAAACTCTC+TGG	+	Chr1:89599809-89599828	MsG0180005281.01.T01:CDS	40.0%
	GGGAAATTCCTACATTACCA+AGG	+	Chr1:89599107-89599126	MsG0180005281.01.T01:CDS	40.0%
	TATGTTTGCAAGTGTTCCAC+AGG	+	Chr1:89599423-89599442	MsG0180005281.01.T01:intron	40.0%
	TGTAGGCTGTATGCCATAAT+TGG	+	Chr1:89599597-89599616	MsG0180005281.01.T01:intron	40.0%
	TTTCAACAGTTTGGGAGTGA+TGG	+	Chr1:89599862-89599881	MsG0180005281.01.T01:CDS	40.0%
!	ACTGTCTTCAGTTTGTTCTG+AGG	-	Chr1:89599154-89599173	None:intergenic	40.0%
!!	GTTATCCTCCTTGGTAATGT+AGG	-	Chr1:89599118-89599137	None:intergenic	40.0%
!!	GTTTATCACAGTTGGTGGAA+GGG	+	Chr1:89599766-89599785	MsG0180005281.01.T01:CDS	40.0%
!!	TCACTTGTGTTTGGTTCTTC+TGG	-	Chr1:89599710-89599729	None:intergenic	40.0%
!!	TGTTTATCACAGTTGGTGGA+AGG	+	Chr1:89599765-89599784	MsG0180005281.01.T01:CDS	40.0%
	AAAGGGATTGAGCATGTTGG+AGG	+	Chr1:89599397-89599416	MsG0180005281.01.T01:intron	45.0%
	CAGTGCATGTCTTTCAGCAA+TGG	+	Chr1:89599170-89599189	MsG0180005281.01.T01:CDS	45.0%
	CTCCCAAACTGTTGAAAGCA+CGG	-	Chr1:89599859-89599878	None:intergenic	45.0%
	TGCCGTGCTTTCAACAGTTT+GGG	+	Chr1:89599854-89599873	MsG0180005281.01.T01:CDS	45.0%
	TTGCCGTGCTTTCAACAGTT+TGG	+	Chr1:89599853-89599872	MsG0180005281.01.T01:CDS	45.0%
	AGCACTCGGACTTGCCTAAT+AGG	+	Chr1:89599334-89599353	MsG0180005281.01.T01:CDS	50.0%
	AGCATGCGGTCAAGCCTATT+AGG	-	Chr1:89599351-89599370	None:intergenic	50.0%
	AGTATCATGGCATCACCCTG+TGG	-	Chr1:89599442-89599461	None:intergenic	50.0%
	ATAGCTAAGGCAACACCACC+TGG	+	Chr1:89599261-89599280	MsG0180005281.01.T01:CDS	50.0%
	GGGTGATGCCATGATACTGA+AGG	+	Chr1:89599444-89599463	MsG0180005281.01.T01:intron	50.0%
	TAGCAAGCAAACGCAGCATG+CGG	-	Chr1:89599365-89599384	None:intergenic	50.0%
!!	GATGGTGACATGAAAGCACC+AGG	-	Chr1:89599282-89599301	None:intergenic	50.0%
	ACCAGCATCAACGCAGCACT+CGG	+	Chr1:89599320-89599339	MsG0180005281.01.T01:CDS	55.0%
!!	GGTGACATGAAAGCACCAGG+TGG	-	Chr1:89599279-89599298	None:intergenic	55.0%
!	TCCGAGTGCTGCGTTGATGC+TGG	-	Chr1:89599324-89599343	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	89599105	89599898	89599105	ID=MsG0180005281.01;Name=MsG0180005281.01
Chr1	mRNA	89599105	89599898	89599105	ID=MsG0180005281.01.T01;Parent=MsG0180005281.01;Name=MsG0180005281.01.T01;_AED=0.23;_eAED=0.24;_QI=0\|0\|0\|1\|1\|1\|2\|0\|194
Chr1	exon	89599105	89599392	89599105	ID=MsG0180005281.01.T01:exon:17236;Parent=MsG0180005281.01.T01
Chr1	exon	89599602	89599898	89599602	ID=MsG0180005281.01.T01:exon:17237;Parent=MsG0180005281.01.T01
Chr1	CDS	89599105	89599392	89599105	ID=MsG0180005281.01.T01:cds;Parent=MsG0180005281.01.T01
Chr1	CDS	89599602	89599898	89599602	ID=MsG0180005281.01.T01:cds;Parent=MsG0180005281.01.T01

Gene Sequence

>MsG0180005281.01.T01

ATGGGAAATTCCTACATTACCAAGGAGGATAACCAAATTAGTGTTACCTCAGAACAAACTGAAGACAGTGCATGTCTTTCAGCAATGGTACTTACCACTAATCTTGTTTATCCAGCAGTGTTAAATGCTGCTATTGATCTCAATTTATTTGAGATCATAGCTAAGGCAACACCACCTGGTGCTTTCATGTCACCATCTGAAATTGCTTCTAAATTACCAGCATCAACGCAGCACTCGGACTTGCCTAATAGGCTTGACCGCATGCTGCGTTTGCTTGCTAGTTATTCTGCTGTATGCCATAATTGGTCAGATGAAAAATGCATAGAATTTTTAAGCAATTGTCACAAAGCTTTATCACCAAATGGAAAAGTGATTATTGTGGAGTTCATATTGCCAGAAGAACCAAACACAAGTGAAGAATCTAAGCTTGTTTCAACTCTTGACAATCTCATGTTTATCACAGTTGGTGGAAGGGAAAGAACTGAGAAACAATATGAGAAATTGAGCAAACTCTCTGGATTTTCCAAATTTCAAGTTGCTTGCCGTGCTTTCAACAGTTTGGGAGTGATGGAATTTTATAAATGA

Protein sequence

>MsG0180005281.01.T01

MGNSYITKEDNQISVTSEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK*