AlfalfaGEDB | MsG0780041248.01

M. sativa cultivar ZhongmuNo.1 / MsG0780041248.01

KEGG: K00430
GO: GO:0004601 GO:0006979 GO:0020037 GO:0055114
PFAM: PF00141

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041248.01.T01	AFK41845.1	98.765	81	1	0	1	81	1	81	2.50E-51	165

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041248.01.T01	Q9LSY7	47.561	82	41	1	1	80	246	327	5.55E-19	81.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041248.01.T01	I3SNK3	98.765	81	1	0	1	81	1	81	1.19e-51	165

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048134.01	MsG0780041248.01	0.844147	9.049688e-59	1.447804e-55
MsG0080048506.01	MsG0780041248.01	0.807196	5.689412e-50	3.149018e-47
MsG0180000028.01	MsG0780041248.01	0.802194	6.298407e-49	3.066034e-46
MsG0180000029.01	MsG0780041248.01	0.824093	9.728425e-54	8.532565e-51
MsG0180000466.01	MsG0780041248.01	0.811402	7.129375e-51	4.409086e-48
MsG0180000985.01	MsG0780041248.01	0.808867	2.508125e-50	1.450277e-47
MsG0180001029.01	MsG0780041248.01	0.852137	5.621717e-61	1.163497e-57
MsG0180001515.01	MsG0780041248.01	0.812475	4.160728e-51	2.648211e-48
MsG0180001800.01	MsG0780041248.01	0.822541	2.241400e-53	1.881726e-50
MsG0180002238.01	MsG0780041248.01	0.803525	3.344456e-49	1.684517e-46
MsG0180003320.01	MsG0780041248.01	0.853515	2.271274e-61	4.920366e-58
MsG0180003322.01	MsG0780041248.01	0.812754	3.615177e-51	2.317784e-48
MsG0180003405.01	MsG0780041248.01	-0.803440	3.482679e-49	1.750194e-46
MsG0180003505.01	MsG0780041248.01	0.807329	5.329910e-50	2.960344e-47
MsG0180004232.01	MsG0780041248.01	0.805993	1.020454e-49	5.476569e-47
MsG0180004359.01	MsG0780041248.01	0.801348	9.394171e-49	4.476170e-46
MsG0180004549.01	MsG0780041248.01	0.815846	7.497611e-52	5.227123e-49
MsG0180004830.01	MsG0780041248.01	0.806330	8.669778e-50	4.692814e-47
MsG0180005080.01	MsG0780041248.01	0.802809	4.703269e-49	2.325940e-46
MsG0180005267.01	MsG0780041248.01	0.811860	5.667162e-51	3.547308e-48
MsG0180005281.01	MsG0780041248.01	0.823165	1.604150e-53	1.370632e-50
MsG0180006195.01	MsG0780041248.01	0.830594	2.689713e-55	2.846762e-52
MsG0280006446.01	MsG0780041248.01	0.809679	1.679558e-50	9.924835e-48
MsG0780040497.01	MsG0780041248.01	0.826012	3.425647e-54	3.174021e-51
MsG0780040498.01	MsG0780041248.01	0.820590	6.330522e-53	5.029700e-50
MsG0780040716.01	MsG0780041248.01	0.845898	3.047796e-59	5.155668e-56
MsG0780040719.01	MsG0780041248.01	0.801088	1.061812e-48	5.026603e-46
MsG0780041036.01	MsG0780041248.01	0.816890	4.379113e-52	3.141581e-49
MsG0780041246.01	MsG0780041248.01	0.852214	5.347783e-61	1.109528e-57
MsG0780041248.01	MsG0880041977.01	0.809960	1.461265e-50	8.698987e-48
MsG0780041248.01	MsG0880042262.01	0.801198	1.008017e-48	4.784905e-46
MsG0780041248.01	MsG0880042369.01	0.808543	2.941020e-50	1.686230e-47
MsG0780041248.01	MsG0880043882.01	0.806881	6.630714e-50	3.640198e-47
MsG0780041248.01	MsG0880044712.01	0.844806	6.016701e-59	9.827607e-56
MsG0780041248.01	MsG0880045801.01	0.839168	1.862461e-57	2.550603e-54
MsG0780041248.01	MsG0880045854.01	0.801703	7.944324e-49	3.819285e-46
MsG0780041248.01	MsG0880046870.01	0.841201	5.484739e-58	7.999409e-55
MsG0780041248.01	MsG0880046946.01	0.814010	1.915288e-51	1.270318e-48
MsG0780041248.01	MsG0880047383.01	0.822379	2.445168e-53	2.043293e-50
MsG0280010936.01	MsG0780041248.01	0.805882	1.077156e-49	5.764200e-47
MsG0280011269.01	MsG0780041248.01	0.805293	1.431910e-49	7.547258e-47
MsG0280011292.01	MsG0780041248.01	0.818177	2.245585e-52	1.668854e-49
MsG0380011635.01	MsG0780041248.01	0.800876	1.173219e-48	5.524128e-46
MsG0380011701.01	MsG0780041248.01	0.832166	1.103800e-55	1.223743e-52
MsG0680031200.01	MsG0780041248.01	0.856738	2.626775e-62	6.330464e-59
MsG0680031684.01	MsG0780041248.01	0.801007	1.103115e-48	5.211486e-46
MsG0680032932.01	MsG0780041248.01	0.849772	2.609553e-60	5.001087e-57
MsG0680034238.01	MsG0780041248.01	0.874484	6.514870e-68	2.938203e-64
MsG0680034254.01	MsG0780041248.01	0.819886	9.176223e-53	7.150289e-50
MsG0680034391.01	MsG0780041248.01	0.817280	3.579002e-52	2.595029e-49
MsG0680034418.01	MsG0780041248.01	0.808575	2.895427e-50	1.661441e-47
MsG0680034728.01	MsG0780041248.01	0.800272	1.557617e-48	7.222259e-46
MsG0680034969.01	MsG0780041248.01	0.807167	5.768807e-50	3.190593e-47
MsG0680034974.01	MsG0780041248.01	0.818657	1.747951e-52	1.316277e-49
MsG0480019146.01	MsG0780041248.01	0.850688	1.444713e-60	2.852998e-57
MsG0480019346.01	MsG0780041248.01	0.828276	9.839203e-55	9.733404e-52
MsG0480019348.01	MsG0780041248.01	0.818734	1.679198e-52	1.267241e-49
MsG0480019817.01	MsG0780041248.01	0.801592	8.372967e-49	4.014048e-46
MsG0480020285.01	MsG0780041248.01	0.801081	1.065364e-48	5.042408e-46
MsG0480020810.01	MsG0780041248.01	0.823813	1.131910e-53	9.850717e-51
MsG0480020904.01	MsG0780041248.01	0.850817	1.328772e-60	2.635584e-57
MsG0480021133.01	MsG0780041248.01	0.807505	4.891345e-50	2.729285e-47
MsG0480021230.01	MsG0780041248.01	0.826166	3.148347e-54	2.929808e-51
MsG0480021360.01	MsG0780041248.01	0.806842	6.759178e-50	3.707015e-47
MsG0480022055.01	MsG0780041248.01	0.818875	1.560289e-52	1.182133e-49
MsG0480022078.01	MsG0780041248.01	0.821337	4.261199e-53	3.457030e-50
MsG0480022833.01	MsG0780041248.01	0.809086	2.251712e-50	1.309691e-47
MsG0480022840.01	MsG0780041248.01	0.803235	3.839679e-49	1.919473e-46
MsG0480022886.01	MsG0780041248.01	0.807291	5.429587e-50	3.012723e-47
MsG0480023432.01	MsG0780041248.01	0.825267	5.144121e-54	4.666198e-51
MsG0580024087.01	MsG0780041248.01	0.834513	2.869281e-56	3.412966e-53
MsG0580025960.01	MsG0780041248.01	0.807228	5.600556e-50	3.102459e-47
MsG0580025961.01	MsG0780041248.01	0.802506	5.431311e-49	2.665186e-46
MsG0580026019.01	MsG0780041248.01	0.813151	2.959163e-51	1.917319e-48
MsG0380015659.01	MsG0780041248.01	0.817791	2.746085e-52	2.019301e-49
MsG0380015660.01	MsG0780041248.01	0.823909	1.074553e-53	9.376591e-51
MsG0380015711.01	MsG0780041248.01	0.816177	6.325013e-52	4.450022e-49
MsG0380016045.01	MsG0780041248.01	0.805900	1.067905e-49	5.717273e-47
MsG0380016299.01	MsG0780041248.01	0.842774	2.106011e-58	3.226625e-55
MsG0380016300.01	MsG0780041248.01	0.801050	1.080961e-48	5.112317e-46
MsG0380016490.01	MsG0780041248.01	0.851443	8.847339e-61	1.791076e-57
MsG0380017168.01	MsG0780041248.01	0.844341	8.026020e-59	1.291807e-55
MsG0380017694.01	MsG0780041248.01	0.800992	1.110951e-48	5.246592e-46
MsG0380017901.01	MsG0780041248.01	0.859082	5.289783e-63	1.379851e-59
MsG0580026521.01	MsG0780041248.01	0.837125	6.249821e-57	8.040574e-54
MsG0580027751.01	MsG0780041248.01	0.819586	1.074701e-52	8.304599e-50
MsG0580027752.01	MsG0780041248.01	0.830773	2.431885e-55	2.587540e-52
MsG0580027753.01	MsG0780041248.01	0.834361	3.133293e-56	3.709875e-53
MsG0580029158.01	MsG0780041248.01	0.813760	2.174178e-51	1.432243e-48
MsG0580029937.01	MsG0780041248.01	0.842604	2.336104e-58	3.560566e-55
MsG0580029938.01	MsG0780041248.01	0.826839	2.176107e-54	2.064310e-51
MsG0680030296.01	MsG0780041248.01	0.809139	2.193633e-50	1.277733e-47
MsG0680030613.01	MsG0780041248.01	0.806671	7.345790e-50	4.010725e-47
MsG0280006546.01	MsG0780041248.01	0.827800	1.280701e-54	1.249364e-51
MsG0280006560.01	MsG0780041248.01	0.838386	2.966595e-57	3.967121e-54
MsG0280006579.01	MsG0780041248.01	0.806710	7.208535e-50	3.939826e-47
MsG0280009232.01	MsG0780041248.01	0.824608	7.362602e-54	6.554338e-51
MsG0280009432.01	MsG0780041248.01	0.822600	2.171848e-53	1.826459e-50
MsG0280010539.01	MsG0780041248.01	0.847180	1.361260e-59	2.399674e-56
MsG0780035930.01	MsG0780041248.01	0.812471	4.169154e-51	2.653332e-48
MsG0780036199.01	MsG0780041248.01	0.807142	5.841069e-50	3.228321e-47
MsG0780036378.01	MsG0780041248.01	0.801895	7.255347e-49	3.505392e-46
MsG0780036472.01	MsG0780041248.01	0.816553	5.212114e-52	3.704693e-49
MsG0780036649.01	MsG0780041248.01	0.827741	1.322831e-54	1.288339e-51
MsG0780036839.01	MsG0780041248.01	0.863899	1.790911e-64	5.517386e-61
MsG0780038313.01	MsG0780041248.01	0.825926	3.591554e-54	3.319616e-51
MsG0780038519.01	MsG0780041248.01	0.847554	1.074642e-59	1.917279e-56
MsG0780038657.01	MsG0780041248.01	0.839747	1.317096e-57	1.836107e-54
MsG0780039373.01	MsG0780041248.01	0.863894	1.796944e-64	5.535019e-61
MsG0780039883.01	MsG0780041248.01	0.802595	5.207442e-49	2.561108e-46
MsG0780039979.01	MsG0780041248.01	0.825929	3.585315e-54	3.314115e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041248.01.T01	MTR_7g107500	95.062	81	4	0	1	81	17	97	9.35e-53	159
MsG0780041248.01.T01	MTR_7g107520	98.765	81	1	0	1	81	240	320	3.74e-52	165
MsG0780041248.01.T01	MTR_4g046713	48.780	82	41	1	1	81	245	326	2.15e-20	82.8
MsG0780041248.01.T01	MTR_1g098320	50.000	78	38	1	5	81	47	124	5.10e-18	73.2
MsG0780041248.01.T01	MTR_2g088770	42.169	83	46	1	1	81	243	325	2.44e-17	74.3
MsG0780041248.01.T01	MTR_1g009750	46.341	82	43	1	1	81	230	311	1.76e-16	72.0
MsG0780041248.01.T01	MTR_1g009750	46.341	82	43	1	1	81	247	328	1.84e-16	72.0
MsG0780041248.01.T01	MTR_3g094650	46.154	78	41	1	1	77	241	318	3.45e-16	71.2
MsG0780041248.01.T01	MTR_6g043280	43.902	82	45	1	1	81	251	332	6.06e-16	70.5
MsG0780041248.01.T01	MTR_5g017860	46.341	82	43	1	1	81	245	326	7.31e-16	70.5
MsG0780041248.01.T01	MTR_4g095450	46.914	81	42	1	1	80	243	323	8.28e-16	70.1
MsG0780041248.01.T01	MTR_5g021060	49.333	75	36	2	9	81	256	330	1.42e-15	69.7
MsG0780041248.01.T01	MTR_5g022870	44.048	84	37	4	1	81	240	316	4.47e-15	68.2
MsG0780041248.01.T01	MTR_8g075100	45.000	80	35	3	5	81	246	319	8.24e-15	67.4
MsG0780041248.01.T01	MTR_4g125940	44.186	86	43	2	1	81	189	274	8.75e-15	67.0
MsG0780041248.01.T01	MTR_1g054205	45.238	84	43	2	1	81	243	326	1.22e-14	67.0
MsG0780041248.01.T01	MTR_7g029030	43.902	82	45	1	1	81	239	320	1.26e-14	67.0
MsG0780041248.01.T01	MTR_4g125940	41.860	86	45	1	1	81	244	329	1.45e-14	67.0
MsG0780041248.01.T01	MTR_5g016010	43.210	81	45	1	1	80	248	328	1.49e-14	66.6
MsG0780041248.01.T01	MTR_7g093370	45.238	84	43	2	1	81	288	371	1.50e-14	67.0
MsG0780041248.01.T01	MTR_2g029860	46.429	84	42	2	1	81	247	330	1.63e-14	66.6
MsG0780041248.01.T01	MTR_2g029830	44.578	83	43	2	2	81	179	261	1.65e-14	66.2
MsG0780041248.01.T01	MTR_3g092990	45.122	82	44	1	1	81	234	315	2.09e-14	66.2
MsG0780041248.01.T01	MTR_3g092990	45.122	82	44	1	1	81	245	326	2.20e-14	66.2
MsG0780041248.01.T01	MTR_2g029830	44.578	83	43	2	2	81	247	329	2.52e-14	66.2
MsG0780041248.01.T01	MTR_2g029820	44.578	83	43	2	2	81	248	330	5.46e-14	65.5
MsG0780041248.01.T01	MTR_2g029740	44.578	83	43	2	2	81	248	330	5.85e-14	65.1
MsG0780041248.01.T01	MTR_2g084090	40.244	82	48	1	1	81	237	318	9.80e-14	64.3
MsG0780041248.01.T01	MTR_6g043460	40.244	82	48	1	1	81	247	328	1.15e-13	64.3
MsG0780041248.01.T01	MTR_2g029800	43.373	83	44	2	2	81	248	330	1.22e-13	64.3
MsG0780041248.01.T01	MTR_1g086320	40.244	82	48	1	1	81	252	333	1.44e-13	63.9
MsG0780041248.01.T01	MTR_6g043240	41.463	82	47	1	1	81	250	331	1.55e-13	63.9
MsG0780041248.01.T01	MTR_2g040000	42.045	88	43	3	1	81	245	331	1.62e-13	63.9
MsG0780041248.01.T01	MTR_4g127670	43.902	82	45	1	1	81	242	323	1.70e-13	63.9
MsG0780041248.01.T01	MTR_2g084080	40.244	82	48	1	1	81	236	317	1.76e-13	63.9
MsG0780041248.01.T01	MTR_7g072510	40.244	82	48	1	1	81	231	312	1.87e-13	63.5
MsG0780041248.01.T01	MTR_1g038680	37.805	82	50	1	1	81	251	332	2.23e-13	63.5
MsG0780041248.01.T01	MTR_1g077000	40.541	74	43	1	9	81	254	327	2.37e-13	63.5
MsG0780041248.01.T01	MTR_5g017850	40.244	82	48	1	1	81	245	326	2.69e-13	63.2
MsG0780041248.01.T01	MTR_2g029750	45.783	83	42	2	2	81	248	330	2.79e-13	63.2
MsG0780041248.01.T01	MTR_2g029850	45.238	84	43	2	1	81	247	330	2.83e-13	63.2
MsG0780041248.01.T01	MTR_2g029815	43.373	83	44	2	2	81	248	330	3.19e-13	63.2
MsG0780041248.01.T01	MTR_8g076820	44.578	83	44	2	1	81	248	330	3.31e-13	63.2
MsG0780041248.01.T01	MTR_3g094670	41.026	78	45	1	1	77	241	318	3.51e-13	62.8
MsG0780041248.01.T01	MTR_0155s0040	38.462	78	47	1	5	81	238	315	5.80e-13	62.4
MsG0780041248.01.T01	MTR_2g029910	44.048	84	44	2	1	81	249	332	5.96e-13	62.4
MsG0780041248.01.T01	MTR_5g083860	40.244	82	48	1	1	81	244	325	6.44e-13	62.4
MsG0780041248.01.T01	MTR_2g084020	43.373	83	45	1	1	81	236	318	6.48e-13	62.0
MsG0780041248.01.T01	MTR_2g028980	42.169	83	45	2	2	81	248	330	7.65e-13	62.0
MsG0780041248.01.T01	MTR_3g072190	39.024	82	49	1	1	81	170	251	8.39e-13	61.2
MsG0780041248.01.T01	MTR_2g084110	40.244	82	48	1	1	81	236	317	9.34e-13	61.6
MsG0780041248.01.T01	MTR_1g101830	41.772	79	43	2	4	81	246	322	9.89e-13	61.6
MsG0780041248.01.T01	MTR_4g132110	39.506	81	48	1	2	81	248	328	2.60e-12	60.5
MsG0780041248.01.T01	MTR_5g014100	37.647	85	49	1	1	81	247	331	2.66e-12	60.5
MsG0780041248.01.T01	MTR_4g132110	39.506	81	48	1	2	81	253	333	2.96e-12	60.5
MsG0780041248.01.T01	MTR_3g072190	39.024	82	49	1	1	81	237	318	3.26e-12	60.1
MsG0780041248.01.T01	MTR_3g105790	39.024	82	49	1	1	81	165	246	3.50e-12	59.7
MsG0780041248.01.T01	MTR_3g105790	39.024	82	49	1	1	81	241	322	5.39e-12	59.7
MsG0780041248.01.T01	MTR_2g084010	43.373	83	45	1	1	81	236	318	7.50e-12	59.3
MsG0780041248.01.T01	MTR_2g084000	40.244	82	47	2	2	81	238	319	8.39e-12	58.9
MsG0780041248.01.T01	MTR_3g094630	39.024	82	49	1	1	81	241	322	2.02e-11	58.2
MsG0780041248.01.T01	MTR_7g086820	36.585	82	51	1	1	81	231	312	3.61e-11	57.4
MsG0780041248.01.T01	MTR_1g086490	38.272	81	49	1	2	81	260	340	3.83e-11	57.4
MsG0780041248.01.T01	MTR_1g066710	37.037	81	50	1	2	81	243	323	4.49e-11	57.0
MsG0780041248.01.T01	MTR_7g026990	40.506	79	46	1	4	81	244	322	6.32e-11	56.6
MsG0780041248.01.T01	MTR_2g029560	41.667	84	46	2	1	81	242	325	8.26e-11	56.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041248.01.T01	AT3G21770	47.561	82	41	1	1	80	246	327	5.66e-20	81.6
MsG0780041248.01.T01	AT4G11290	49.398	83	40	1	1	81	244	326	4.50e-19	79.3
MsG0780041248.01.T01	AT1G05260	46.988	83	42	1	1	81	243	325	5.93e-19	79.0
MsG0780041248.01.T01	AT4G30170	50.000	82	40	1	1	81	244	325	2.20e-18	77.4
MsG0780041248.01.T01	AT1G05240	43.529	85	44	1	1	81	241	325	6.48e-18	75.9
MsG0780041248.01.T01	AT1G05250	43.529	85	44	1	1	81	241	325	6.48e-18	75.9
MsG0780041248.01.T01	AT5G15180	45.783	83	43	1	1	81	247	329	9.44e-18	75.5
MsG0780041248.01.T01	AT2G24800	46.914	81	42	1	2	81	249	329	9.53e-18	75.5
MsG0780041248.01.T01	AT2G39040	45.783	83	43	1	1	81	268	350	2.70e-17	74.7
MsG0780041248.01.T01	AT5G19880	45.238	84	43	2	1	81	246	329	4.64e-17	73.6
MsG0780041248.01.T01	AT2G18140	44.578	83	44	2	1	81	253	335	6.67e-17	73.2
MsG0780041248.01.T01	AT4G31760	44.444	81	44	1	2	81	246	326	7.26e-17	73.2
MsG0780041248.01.T01	AT2G18150	43.373	83	45	2	1	81	254	336	7.75e-16	70.5
MsG0780041248.01.T01	AT4G37530	45.122	82	44	1	1	81	248	329	9.06e-16	70.1
MsG0780041248.01.T01	AT5G39580	43.902	82	45	1	1	81	238	319	1.03e-15	70.1
MsG0780041248.01.T01	AT5G64120	45.122	82	44	1	1	81	247	328	1.12e-15	70.1
MsG0780041248.01.T01	AT2G18980	45.122	82	44	1	1	81	242	323	1.30e-15	69.7
MsG0780041248.01.T01	AT4G36430	42.169	83	46	2	1	81	248	330	1.56e-15	69.7
MsG0780041248.01.T01	AT1G71695	45.679	81	43	1	2	81	259	339	1.69e-15	69.7
MsG0780041248.01.T01	AT4G37520	43.902	82	45	1	1	81	245	326	2.49e-15	68.9
MsG0780041248.01.T01	AT4G37520	43.902	82	45	1	1	81	248	329	2.71e-15	68.9
MsG0780041248.01.T01	AT1G14540	46.914	81	38	2	3	81	238	315	3.44e-15	68.6
MsG0780041248.01.T01	AT3G01190	43.373	83	45	1	1	81	239	321	4.44e-15	68.2
MsG0780041248.01.T01	AT1G14550	46.914	81	38	2	3	81	244	321	6.85e-15	67.8
MsG0780041248.01.T01	AT2G35380	40.000	85	47	1	1	81	163	247	1.12e-14	66.6
MsG0780041248.01.T01	AT5G66390	50.000	76	34	3	9	81	259	333	1.62e-14	66.6
MsG0780041248.01.T01	AT2G35380	40.000	85	47	1	1	81	251	335	2.14e-14	66.6
MsG0780041248.01.T01	AT5G17820	39.024	82	49	1	1	81	232	313	3.64e-14	65.9
MsG0780041248.01.T01	AT5G17820	39.024	82	49	1	1	81	285	366	4.67e-14	65.5
MsG0780041248.01.T01	AT3G49960	43.902	82	45	1	1	81	248	329	5.22e-14	65.5
MsG0780041248.01.T01	AT5G14130	42.683	82	46	1	1	81	290	371	1.06e-13	64.7
MsG0780041248.01.T01	AT5G14130	42.683	82	46	1	1	81	249	330	1.09e-13	64.3
MsG0780041248.01.T01	AT5G64110	42.353	85	45	1	1	81	246	330	2.08e-13	63.5
MsG0780041248.01.T01	AT4G08770	42.857	84	44	2	2	81	244	327	2.60e-13	63.5
MsG0780041248.01.T01	AT5G06730	45.238	84	43	2	1	81	251	334	2.69e-13	63.5
MsG0780041248.01.T01	AT5G67400	41.463	82	47	1	1	81	248	329	3.21e-13	63.2
MsG0780041248.01.T01	AT1G34510	37.805	82	50	1	1	81	228	309	4.11e-13	62.8
MsG0780041248.01.T01	AT2G38390	45.238	84	43	2	1	81	250	333	4.65e-13	62.8
MsG0780041248.01.T01	AT5G19890	39.535	86	45	2	1	81	244	327	5.15e-13	62.4
MsG0780041248.01.T01	AT5G06720	45.238	84	43	2	1	81	250	333	1.14e-12	61.6
MsG0780041248.01.T01	AT4G33420	39.189	74	44	1	9	81	252	325	2.63e-12	60.5
MsG0780041248.01.T01	AT4G33420	39.189	74	44	1	9	81	299	372	2.92e-12	60.5
MsG0780041248.01.T01	AT4G21960	37.037	81	50	1	2	81	247	327	6.13e-12	59.7
MsG0780041248.01.T01	AT3G50990	40.964	83	47	1	1	81	259	341	7.17e-12	59.3
MsG0780041248.01.T01	AT3G32980	40.000	85	45	2	2	81	251	334	1.31e-11	58.5
MsG0780041248.01.T01	AT5G24070	40.741	81	47	1	2	81	255	335	1.35e-11	58.5
MsG0780041248.01.T01	AT5G40150	38.554	83	45	3	1	81	250	328	3.09e-11	57.8
MsG0780041248.01.T01	AT5G58390	38.462	78	47	1	1	77	235	312	4.48e-11	57.0
MsG0780041248.01.T01	AT3G28200	36.585	82	48	2	1	81	238	316	5.46e-11	57.0
MsG0780041248.01.T01	AT4G08780	40.000	85	45	2	2	81	244	327	6.99e-11	56.6

Find 14 sgRNAs with CRISPR-Local

Find 16 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATTCATTAACAATGTTTC+TGG	0.127160	7:+88773738	None:intergenic
TCAAATGTTGTTGAGCTATT+TGG	0.173041	7:+88773838	None:intergenic
CAGAAACATTGTTAATGAAT+TGG	0.289764	7:-88773737	MsG0780041248.01.T01:CDS
GTTTGAATGGAGAAATTAGA+AGG	0.402528	7:-88773642	MsG0780041248.01.T01:CDS
GAGGTCCTCACTGGTTTGAA+TGG	0.449923	7:-88773655	MsG0780041248.01.T01:CDS
AACAATGTTTCTGGATTGCT+TGG	0.462159	7:+88773747	None:intergenic
GAAGAGGATGGGAGCTATTG+AGG	0.498561	7:-88773674	MsG0780041248.01.T01:CDS
GGAGCTATTGAGGTCCTCAC+TGG	0.501455	7:-88773664	MsG0780041248.01.T01:CDS
TTCTCAGTCAATGAAGAGGA+TGG	0.515611	7:-88773686	MsG0780041248.01.T01:CDS
TCCTGTACTTCTACAAAACA+AGG	0.536222	7:-88773803	MsG0780041248.01.T01:CDS
CTTCATTGACTGAGAAAACT+CGG	0.554984	7:+88773693	None:intergenic
TCTCAGTCAATGAAGAGGAT+GGG	0.577113	7:-88773685	MsG0780041248.01.T01:CDS
CCTGTACTTCTACAAAACAA+GGG	0.691319	7:-88773802	MsG0780041248.01.T01:CDS
TTTCTCCATTCAAACCAGTG+AGG	0.718240	7:+88773650	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CAATTCATTAACAATGTTTC+TGG	+	Chr7:88773730-88773749	None:intergenic	25.0%
!	CAGAAACATTGTTAATGAAT+TGG	-	Chr7:88773728-88773747	MsG0780041248.01.T01:CDS	25.0%
	GTTTGAATGGAGAAATTAGA+AGG	-	Chr7:88773823-88773842	MsG0780041248.01.T01:CDS	30.0%
	TCAAATGTTGTTGAGCTATT+TGG	+	Chr7:88773630-88773649	None:intergenic	30.0%
	CCTGTACTTCTACAAAACAA+GGG	-	Chr7:88773663-88773682	MsG0780041248.01.T01:CDS	35.0%
	TCCTGTACTTCTACAAAACA+AGG	-	Chr7:88773662-88773681	MsG0780041248.01.T01:CDS	35.0%
!	AGTTTTCTCAGTCAATGAAG+AGG	-	Chr7:88773775-88773794	MsG0780041248.01.T01:CDS	35.0%
!	CTTCATTGACTGAGAAAACT+CGG	+	Chr7:88773775-88773794	None:intergenic	35.0%
!!	AACAATGTTTCTGGATTGCT+TGG	+	Chr7:88773721-88773740	None:intergenic	35.0%
	TCTCAGTCAATGAAGAGGAT+GGG	-	Chr7:88773780-88773799	MsG0780041248.01.T01:CDS	40.0%
	TTCTCAGTCAATGAAGAGGA+TGG	-	Chr7:88773779-88773798	MsG0780041248.01.T01:CDS	40.0%
	TTTCTCCATTCAAACCAGTG+AGG	+	Chr7:88773818-88773837	None:intergenic	40.0%
!!!	CCCTTGTTTTGTAGAAGTAC+AGG	+	Chr7:88773666-88773685	None:intergenic	40.0%
	GAAGAGGATGGGAGCTATTG+AGG	-	Chr7:88773791-88773810	MsG0780041248.01.T01:CDS	50.0%
!!	GAGGTCCTCACTGGTTTGAA+TGG	-	Chr7:88773810-88773829	MsG0780041248.01.T01:CDS	50.0%
	GGAGCTATTGAGGTCCTCAC+TGG	-	Chr7:88773801-88773820	MsG0780041248.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	88773621	88773866	88773621	ID=MsG0780041248.01;Name=MsG0780041248.01
Chr7	mRNA	88773621	88773866	88773621	ID=MsG0780041248.01.T01;Parent=MsG0780041248.01;Name=MsG0780041248.01.T01;_AED=0.40;_eAED=0.40;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|81
Chr7	exon	88773621	88773866	88773621	ID=MsG0780041248.01.T01:exon:20222;Parent=MsG0780041248.01.T01
Chr7	CDS	88773621	88773866	88773621	ID=MsG0780041248.01.T01:cds;Parent=MsG0780041248.01.T01

Gene Sequence	>MsG0780041248.01.T01 ATGGATCCAAATAGCTCAACAACATTTGACAATGACTATTATCCTGTACTTCTACAAAACAAGGGTCTCTTCACATCAGACGCTGCTCTTCTAACAACCAAGCAATCCAGAAACATTGTTAATGAATTGGTTTCACAAAACAAATTCTTCACCGAGTTTTCTCAGTCAATGAAGAGGATGGGAGCTATTGAGGTCCTCACTGGTTTGAATGGAGAAATTAGAAGGAAGTGCTCTGTTGTTAATTAA
Protein sequence	>MsG0780041248.01.T01 MDPNSSTTFDNDYYPVLLQNKGLFTSDAALLTTKQSRNIVNELVSQNKFFTEFSQSMKRMGAIEVLTGLNGEIRRKCSVVN*