AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036208.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036208.01.T01 MTR_7g009820 88.652 282 10 1 2 283 224 483 3.21e-167 478
MsG0780036208.01.T01 MTR_7g009780 66.551 287 70 4 2 286 214 476 5.02e-114 341
MsG0780036208.01.T01 MTR_7g009760 49.324 148 67 2 142 286 133 275 5.77e-29 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 85 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAACCCTGATGCTGATTT+TGG 0.132899 7:+4714940 MsG0780036208.01.T01:CDS
CTGGGTTTGGCAACGGTTAT+TGG 0.236274 7:+4716002 MsG0780036208.01.T01:CDS
AATATTCTGGTGGAGCTATA+TGG 0.264475 7:+4714632 MsG0780036208.01.T01:CDS
TTCCAGTGGCAATGTATATA+TGG 0.265099 7:-4714687 None:intergenic
TGTACGATGGTGAAATTAAA+TGG 0.273223 7:+4714842 MsG0780036208.01.T01:CDS
CCATTAGCAGTTGCATTACT+AGG 0.279759 7:-4715805 None:intergenic
ATTAAATGGTACCATCAATT+AGG 0.316692 7:+4714856 MsG0780036208.01.T01:CDS
GATAGGTCCTTTCTTATTTG+TGG 0.326651 7:-4715866 None:intergenic
ACATCAATTGTGAGCATCAT+TGG 0.339785 7:-4714970 None:intergenic
ACGGTTATTGGAGGCCTTAC+TGG 0.340046 7:+4716014 MsG0780036208.01.T01:CDS
AACAATGGTTGCATATATCT+TGG 0.341143 7:+4715966 MsG0780036208.01.T01:CDS
GCTGGACCTGGTGGAATTGC+AGG 0.341429 7:+4715616 MsG0780036208.01.T01:CDS
ATGCTCACAATTGATGTAAA+TGG 0.353186 7:+4714976 MsG0780036208.01.T01:CDS
TTTCTTGATGCATCAATAGA+TGG 0.353889 7:-4714664 None:intergenic
GCTAATGGCATTGTCTTTGC+AGG 0.354990 7:+4715841 MsG0780036208.01.T01:CDS
TCCGGTCGTTGTTGTCTTGT+TGG 0.370598 7:-4715728 None:intergenic
CCTAGTAATGCAACTGCTAA+TGG 0.377088 7:+4715805 MsG0780036208.01.T01:CDS
AATTAGGTGGATATGATGTT+TGG 0.379146 7:+4714872 MsG0780036208.01.T01:CDS
GGCAAAAGAGGTGAATATTC+TGG 0.389528 7:+4714619 MsG0780036208.01.T01:CDS
TGTCGCGACACCACAACAAC+GGG 0.390691 7:+4715240 MsG0780036208.01.T01:CDS
TTAGGTCCAGGAGGACAATT+AGG 0.391186 7:-4714922 None:intergenic
ATGCCATTAGCTACACTAAC+AGG 0.393915 7:-4715829 None:intergenic
CAAGTAGTGGCAAGATCTTA+TGG 0.397359 7:+4715770 MsG0780036208.01.T01:CDS
CTTACCGTTATTGCATAGAT+AGG 0.410717 7:-4715883 None:intergenic
CTTGGAAATGGTTATACTCT+GGG 0.411208 7:+4715984 MsG0780036208.01.T01:CDS
ATATTCTGGTGGAGCTATAT+GGG 0.413118 7:+4714633 MsG0780036208.01.T01:CDS
AAATGGTTATACTCTGGGTT+TGG 0.413220 7:+4715989 MsG0780036208.01.T01:CDS
GGTTGCATATATCTTGGAAA+TGG 0.416429 7:+4715972 MsG0780036208.01.T01:CDS
GTCACAATGGCGACATCATT+TGG 0.416873 7:+4715058 MsG0780036208.01.T01:CDS
CATCATATCCACCTAATTGA+TGG 0.425001 7:-4714867 None:intergenic
GCTTCTCCAAAATCAGCATC+AGG 0.427656 7:-4714946 None:intergenic
CCAAAATCAGCATCAGGGTT+AGG 0.434986 7:-4714940 None:intergenic
TCTGGTTCAACACATTGATC+AGG 0.439239 7:-4714787 None:intergenic
GACAACAACGACCGGAGGTT+GGG 0.452196 7:+4715735 MsG0780036208.01.T01:CDS
ATAGTTTACTTAAACACAAA+AGG 0.454120 7:-4716054 None:intergenic
TCTTGGAAATGGTTATACTC+TGG 0.463329 7:+4715983 MsG0780036208.01.T01:CDS
ATTGTTATCAGGTAACATAT+AGG 0.480668 7:-4714596 None:intergenic
GTCGTTGTTGTCTTGTTGGA+TGG 0.481353 7:-4715724 None:intergenic
TCAACACCTAATTGTCCTCC+TGG 0.489198 7:+4714916 MsG0780036208.01.T01:CDS
CCTGATAACAATGGCAAAAG+AGG 0.493988 7:+4714607 MsG0780036208.01.T01:CDS
GGTTTGGCAACGGTTATTGG+AGG 0.496155 7:+4716005 MsG0780036208.01.T01:CDS
GGTCCTGTTAGTGTAGCTAA+TGG 0.500128 7:+4715826 MsG0780036208.01.T01:CDS
TTCCATTGCTACCCAACCTC+CGG 0.505492 7:-4715746 None:intergenic
CATTAGCAGTTGCATTACTA+GGG 0.507343 7:-4715804 None:intergenic
GAATTGCAGGAGGTGGAACA+TGG 0.511710 7:+4715629 MsG0780036208.01.T01:CDS
ACACATTGATCAGGTTGAGT+TGG 0.517315 7:-4714778 None:intergenic
GACCGGAGGTTGGGTAGCAA+TGG 0.522325 7:+4715744 MsG0780036208.01.T01:CDS
CTATGCAATAACGGTAAGAC+TGG 0.525555 7:+4715888 MsG0780036208.01.T01:CDS
TGCATTACTAGGGTTAGCTA+TGG 0.526749 7:-4715794 None:intergenic
AGACAACAACGACCGGAGGT+TGG 0.527268 7:+4715734 MsG0780036208.01.T01:CDS
TGACATTGACGTATGTGTAA+AGG 0.534143 7:-4714724 None:intergenic
CCACCTCCTGCAATTCCACC+AGG 0.536641 7:-4715622 None:intergenic
AAAGAGAAGTACCACCAGTA+AGG 0.537523 7:-4716028 None:intergenic
TTATACTCTGGGTTTGGCAA+CGG 0.538064 7:+4715995 MsG0780036208.01.T01:CDS
TCCAACAAGACAACAACGAC+CGG 0.539301 7:+4715727 MsG0780036208.01.T01:CDS
GCAGGATCCACAAATAAGAA+AGG 0.545631 7:+4715859 MsG0780036208.01.T01:CDS
TCAGCATCAGGGTTAGGTCC+AGG 0.546165 7:-4714934 None:intergenic
CCTGGTGGAATTGCAGGAGG+TGG 0.549486 7:+4715622 MsG0780036208.01.T01:CDS
AACCATATATACATTGCCAC+TGG 0.550879 7:+4714685 MsG0780036208.01.T01:CDS
GAGACTGGAGCAACTGTGTA+TGG 0.552916 7:+4715930 MsG0780036208.01.T01:CDS
TGGCGACATCATTTGGTCTA+CGG 0.562799 7:+4715065 MsG0780036208.01.T01:CDS
ATGTCGCGACACCACAACAA+CGG 0.571251 7:+4715239 MsG0780036208.01.T01:CDS
AATTGCAGGAGGTGGAACAT+GGG 0.577922 7:+4715630 MsG0780036208.01.T01:CDS
AGGACCTATCTATGCAATAA+CGG 0.579023 7:+4715879 MsG0780036208.01.T01:CDS
GGTGGTATTTCAATTAACAA+TGG 0.583317 7:+4715951 MsG0780036208.01.T01:CDS
ACTTAATCAACCCGTTGTTG+TGG 0.584828 7:-4715250 None:intergenic
TTAGCACTTGATTTGTACGA+TGG 0.587635 7:+4714829 MsG0780036208.01.T01:CDS
ATTGCAGGAGGTGGAACATG+GGG 0.597976 7:+4715631 MsG0780036208.01.T01:CDS
TTGACAAATCATTACAAGCA+AGG 0.600049 7:-4714897 None:intergenic
AAATGGTACCATCAATTAGG+TGG 0.606186 7:+4714859 MsG0780036208.01.T01:CDS
TGGGCTTTGCACCGTCACAA+TGG 0.619336 7:+4715045 MsG0780036208.01.T01:CDS
TTTAAGGAAGCTGGACCTGG+TGG 0.626935 7:+4715607 MsG0780036208.01.T01:intron
GTTGTTGCTGTACAAAAGAG+TGG 0.628248 7:+4715015 MsG0780036208.01.T01:CDS
TATTCTGGTGGAGCTATATG+GGG 0.659541 7:+4714634 MsG0780036208.01.T01:CDS
CTTCTCCAAAATCAGCATCA+GGG 0.663016 7:-4714945 None:intergenic
GGACCTGGTGGAATTGCAGG+AGG 0.666186 7:+4715619 MsG0780036208.01.T01:CDS
GTAGCAATGGAAGCAAGTAG+TGG 0.670681 7:+4715757 MsG0780036208.01.T01:CDS
AAATGATGTCGCCATTGTGA+CGG 0.678248 7:-4715056 None:intergenic
AACAAGACAACAACGACCGG+AGG 0.684320 7:+4715730 MsG0780036208.01.T01:CDS
GTTATTGGAGGCCTTACTGG+TGG 0.687764 7:+4716017 MsG0780036208.01.T01:CDS
AGCTGAGTACAAATTTCCAG+TGG 0.694688 7:-4714701 None:intergenic
GCATCAGGGTTAGGTCCAGG+AGG 0.710561 7:-4714931 None:intergenic
AAAAGAGGTGAATATTCTGG+TGG 0.712735 7:+4714622 MsG0780036208.01.T01:CDS
TATATGTTACCTGATAACAA+TGG 0.716707 7:+4714598 MsG0780036208.01.T01:CDS
ACTGGAGCAACTGTGTATGG+TGG 0.753578 7:+4715933 MsG0780036208.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTATTTTGATTTTTTTTAAT+AGG + Chr7:4715415-4715434 MsG0780036208.01.T01:intron 10.0%
!!! TTCATTTACATATTTTTTTA+AGG + Chr7:4715591-4715610 MsG0780036208.01.T01:intron 10.0%
!! TATTAATGTAAAGTCTAATT+TGG + Chr7:4715445-4715464 MsG0780036208.01.T01:intron 15.0%
!!! AAAGATGTTTTTATTTTTGA+AGG - Chr7:4715377-4715396 None:intergenic 15.0%
!!! TACTTTTTAAAGAATAAAAG+TGG + Chr7:4715513-4715532 MsG0780036208.01.T01:intron 15.0%
!!! TTTAGCAATACAATTTTTTA+TGG - Chr7:4715567-4715586 None:intergenic 15.0%
!! ATATTTATTAGTTGTAGGAA+TGG - Chr7:4715477-4715496 None:intergenic 20.0%
!! GAAATAATTCGTTACTATAA+TGG - Chr7:4715121-4715140 None:intergenic 20.0%
!! TATTTATTAGTTGTAGGAAT+GGG - Chr7:4715476-4715495 None:intergenic 20.0%
!! TCTCAATATTTATTAGTTGT+AGG - Chr7:4715482-4715501 None:intergenic 20.0%
!!! AAACATCTTTTAAACCTAAT+AGG + Chr7:4715387-4715406 MsG0780036208.01.T01:intron 20.0%
!!! ATGTTTTTATTTTTGAAGGA+AGG - Chr7:4715373-4715392 None:intergenic 20.0%
!!! ATTGAATTAGAATGATTTTC+TGG - Chr7:4714808-4714827 None:intergenic 20.0%
! ATTAAATGGTACCATCAATT+AGG + Chr7:4714856-4714875 MsG0780036208.01.T01:CDS 25.0%
! ATTGTTATCAGGTAACATAT+AGG - Chr7:4714599-4714618 None:intergenic 25.0%
! TATATGTTACCTGATAACAA+TGG + Chr7:4714598-4714617 MsG0780036208.01.T01:CDS 25.0%
! TCAAAATAGTTTGACCTATT+AGG - Chr7:4715404-4715423 None:intergenic 25.0%
!!! ACATATTTTTTTAAGGAAGC+TGG + Chr7:4715598-4715617 MsG0780036208.01.T01:intron 25.0%
!!! TGATTTTGTGATTGATTTAG+AGG + Chr7:4715204-4715223 MsG0780036208.01.T01:CDS 25.0%
AACAATGGTTGCATATATCT+TGG + Chr7:4715966-4715985 MsG0780036208.01.T01:CDS 30.0%
AATTAGGTGGATATGATGTT+TGG + Chr7:4714872-4714891 MsG0780036208.01.T01:CDS 30.0%
ATGCTCACAATTGATGTAAA+TGG + Chr7:4714976-4714995 MsG0780036208.01.T01:CDS 30.0%
GGTGGTATTTCAATTAACAA+TGG + Chr7:4715951-4715970 MsG0780036208.01.T01:CDS 30.0%
TGTACGATGGTGAAATTAAA+TGG + Chr7:4714842-4714861 MsG0780036208.01.T01:CDS 30.0%
TTGACAAATCATTACAAGCA+AGG - Chr7:4714900-4714919 None:intergenic 30.0%
TTTCTTGATGCATCAATAGA+TGG - Chr7:4714667-4714686 None:intergenic 30.0%
AAAAGAGGTGAATATTCTGG+TGG + Chr7:4714622-4714641 MsG0780036208.01.T01:CDS 35.0%
AAATGGTACCATCAATTAGG+TGG + Chr7:4714859-4714878 MsG0780036208.01.T01:CDS 35.0%
AAATGGTTATACTCTGGGTT+TGG + Chr7:4715989-4716008 MsG0780036208.01.T01:CDS 35.0%
AACCATATATACATTGCCAC+TGG + Chr7:4714685-4714704 MsG0780036208.01.T01:CDS 35.0%
AATATTCTGGTGGAGCTATA+TGG + Chr7:4714632-4714651 MsG0780036208.01.T01:CDS 35.0%
ACATCAATTGTGAGCATCAT+TGG - Chr7:4714973-4714992 None:intergenic 35.0%
AGGACCTATCTATGCAATAA+CGG + Chr7:4715879-4715898 MsG0780036208.01.T01:CDS 35.0%
ATATTCTGGTGGAGCTATAT+GGG + Chr7:4714633-4714652 MsG0780036208.01.T01:CDS 35.0%
CATCATATCCACCTAATTGA+TGG - Chr7:4714870-4714889 None:intergenic 35.0%
CATTAGCAGTTGCATTACTA+GGG - Chr7:4715807-4715826 None:intergenic 35.0%
CTTACCGTTATTGCATAGAT+AGG - Chr7:4715886-4715905 None:intergenic 35.0%
CTTGGAAATGGTTATACTCT+GGG + Chr7:4715984-4716003 MsG0780036208.01.T01:CDS 35.0%
GGTTGCATATATCTTGGAAA+TGG + Chr7:4715972-4715991 MsG0780036208.01.T01:CDS 35.0%
TATTAGTTGTAGGAATGGGT+TGG - Chr7:4715472-4715491 None:intergenic 35.0%
TCTTGGAAATGGTTATACTC+TGG + Chr7:4715983-4716002 MsG0780036208.01.T01:CDS 35.0%
TGACATTGACGTATGTGTAA+AGG - Chr7:4714727-4714746 None:intergenic 35.0%
TTCCAGTGGCAATGTATATA+TGG - Chr7:4714690-4714709 None:intergenic 35.0%
TTTCAATCTCTACAGCAGTT+CGG + Chr7:4715137-4715156 MsG0780036208.01.T01:intron 35.0%
! GATAGGTCCTTTCTTATTTG+TGG - Chr7:4715869-4715888 None:intergenic 35.0%
! GTAAGACTGGTGAAATTTTG+TGG + Chr7:4715901-4715920 MsG0780036208.01.T01:CDS 35.0%
!! ACAAAAGAGTGGTTTTGCTT+GGG + Chr7:4715026-4715045 MsG0780036208.01.T01:CDS 35.0%
!! CAGCAGTTCGGTTTTATAAT+TGG + Chr7:4715149-4715168 MsG0780036208.01.T01:intron 35.0%
!! TACAAAAGAGTGGTTTTGCT+TGG + Chr7:4715025-4715044 MsG0780036208.01.T01:CDS 35.0%
!! TTAGCACTTGATTTGTACGA+TGG + Chr7:4714829-4714848 MsG0780036208.01.T01:CDS 35.0%
!!! ATTTTGTGGTCTTATGAGAC+TGG + Chr7:4715915-4715934 MsG0780036208.01.T01:CDS 35.0%
AAATGATGTCGCCATTGTGA+CGG - Chr7:4715059-4715078 None:intergenic 40.0%
ACTTAATCAACCCGTTGTTG+TGG - Chr7:4715253-4715272 None:intergenic 40.0%
AGCTGAGTACAAATTTCCAG+TGG - Chr7:4714704-4714723 None:intergenic 40.0%
ATGCCATTAGCTACACTAAC+AGG - Chr7:4715832-4715851 None:intergenic 40.0%
CAAGTAGTGGCAAGATCTTA+TGG + Chr7:4715770-4715789 MsG0780036208.01.T01:CDS 40.0%
CCATTAGCAGTTGCATTACT+AGG - Chr7:4715808-4715827 None:intergenic 40.0%
CCTAGTAATGCAACTGCTAA+TGG + Chr7:4715805-4715824 MsG0780036208.01.T01:CDS 40.0%
CCTGATAACAATGGCAAAAG+AGG + Chr7:4714607-4714626 MsG0780036208.01.T01:CDS 40.0%
CTATGCAATAACGGTAAGAC+TGG + Chr7:4715888-4715907 MsG0780036208.01.T01:CDS 40.0%
CTTCTCCAAAATCAGCATCA+GGG - Chr7:4714948-4714967 None:intergenic 40.0%
GCAGGATCCACAAATAAGAA+AGG + Chr7:4715859-4715878 MsG0780036208.01.T01:CDS 40.0%
GGCAAAAGAGGTGAATATTC+TGG + Chr7:4714619-4714638 MsG0780036208.01.T01:CDS 40.0%
GTTGTTGCTGTACAAAAGAG+TGG + Chr7:4715015-4715034 MsG0780036208.01.T01:CDS 40.0%
TATTCTGGTGGAGCTATATG+GGG + Chr7:4714634-4714653 MsG0780036208.01.T01:CDS 40.0%
TTATACTCTGGGTTTGGCAA+CGG + Chr7:4715995-4716014 MsG0780036208.01.T01:CDS 40.0%
! CCTCTTTTGCCATTGTTATC+AGG - Chr7:4714610-4714629 None:intergenic 40.0%
! TCTGGTTCAACACATTGATC+AGG - Chr7:4714790-4714809 None:intergenic 40.0%
! TGTCGCGACATTTTGCAAAT+TGG - Chr7:4715230-4715249 None:intergenic 40.0%
!! AAAGAGAAGTACCACCAGTA+AGG - Chr7:4716031-4716050 None:intergenic 40.0%
!! ACACATTGATCAGGTTGAGT+TGG - Chr7:4714781-4714800 None:intergenic 40.0%
!! TGCATTACTAGGGTTAGCTA+TGG - Chr7:4715797-4715816 None:intergenic 40.0%
!!! TTTTTTAAGGAAGCTGGACC+TGG + Chr7:4715604-4715623 MsG0780036208.01.T01:intron 40.0%
AATTGCAGGAGGTGGAACAT+GGG + Chr7:4715630-4715649 MsG0780036208.01.T01:CDS 45.0%
CCAAAATCAGCATCAGGGTT+AGG - Chr7:4714943-4714962 None:intergenic 45.0%
GCTAATGGCATTGTCTTTGC+AGG + Chr7:4715841-4715860 MsG0780036208.01.T01:CDS 45.0%
GCTTCTCCAAAATCAGCATC+AGG - Chr7:4714949-4714968 None:intergenic 45.0%
GGTCCTGTTAGTGTAGCTAA+TGG + Chr7:4715826-4715845 MsG0780036208.01.T01:CDS 45.0%
GTAGCAATGGAAGCAAGTAG+TGG + Chr7:4715757-4715776 MsG0780036208.01.T01:CDS 45.0%
GTCACAATGGCGACATCATT+TGG + Chr7:4715058-4715077 MsG0780036208.01.T01:CDS 45.0%
TCAACACCTAATTGTCCTCC+TGG + Chr7:4714916-4714935 MsG0780036208.01.T01:CDS 45.0%
TCCAACAAGACAACAACGAC+CGG + Chr7:4715727-4715746 MsG0780036208.01.T01:CDS 45.0%
TGGCGACATCATTTGGTCTA+CGG + Chr7:4715065-4715084 MsG0780036208.01.T01:CDS 45.0%
TTAGGTCCAGGAGGACAATT+AGG - Chr7:4714925-4714944 None:intergenic 45.0%
! GTCGTTGTTGTCTTGTTGGA+TGG - Chr7:4715727-4715746 None:intergenic 45.0%
!!! CCTAACCCTGATGCTGATTT+TGG + Chr7:4714940-4714959 MsG0780036208.01.T01:CDS 45.0%
AACAAGACAACAACGACCGG+AGG + Chr7:4715730-4715749 MsG0780036208.01.T01:CDS 50.0%
ACGGTTATTGGAGGCCTTAC+TGG + Chr7:4716014-4716033 MsG0780036208.01.T01:CDS 50.0%
ACTGGAGCAACTGTGTATGG+TGG + Chr7:4715933-4715952 MsG0780036208.01.T01:CDS 50.0%
ATGTCGCGACACCACAACAA+CGG + Chr7:4715239-4715258 MsG0780036208.01.T01:CDS 50.0%
ATTGCAGGAGGTGGAACATG+GGG + Chr7:4715631-4715650 MsG0780036208.01.T01:CDS 50.0%
CTGGGTTTGGCAACGGTTAT+TGG + Chr7:4716002-4716021 MsG0780036208.01.T01:CDS 50.0%
GAATTGCAGGAGGTGGAACA+TGG + Chr7:4715629-4715648 MsG0780036208.01.T01:CDS 50.0%
GAGACTGGAGCAACTGTGTA+TGG + Chr7:4715930-4715949 MsG0780036208.01.T01:CDS 50.0%
GGTTTGGCAACGGTTATTGG+AGG + Chr7:4716005-4716024 MsG0780036208.01.T01:CDS 50.0%
GTTATTGGAGGCCTTACTGG+TGG + Chr7:4716017-4716036 MsG0780036208.01.T01:CDS 50.0%
TCCGGTCGTTGTTGTCTTGT+TGG - Chr7:4715731-4715750 None:intergenic 50.0%
TTCCATTGCTACCCAACCTC+CGG - Chr7:4715749-4715768 None:intergenic 50.0%
TTTAAGGAAGCTGGACCTGG+TGG + Chr7:4715607-4715626 MsG0780036208.01.T01:intron 50.0%
AGACAACAACGACCGGAGGT+TGG + Chr7:4715734-4715753 MsG0780036208.01.T01:CDS 55.0%
GACAACAACGACCGGAGGTT+GGG + Chr7:4715735-4715754 MsG0780036208.01.T01:CDS 55.0%
TCAGCATCAGGGTTAGGTCC+AGG - Chr7:4714937-4714956 None:intergenic 55.0%
TGGGCTTTGCACCGTCACAA+TGG + Chr7:4715045-4715064 MsG0780036208.01.T01:CDS 55.0%
TGTCGCGACACCACAACAAC+GGG + Chr7:4715240-4715259 MsG0780036208.01.T01:CDS 55.0%
CCACCTCCTGCAATTCCACC+AGG - Chr7:4715625-4715644 None:intergenic 60.0%
CCTGGTGGAATTGCAGGAGG+TGG + Chr7:4715622-4715641 MsG0780036208.01.T01:CDS 60.0%
GACCGGAGGTTGGGTAGCAA+TGG + Chr7:4715744-4715763 MsG0780036208.01.T01:CDS 60.0%
GCATCAGGGTTAGGTCCAGG+AGG - Chr7:4714934-4714953 None:intergenic 60.0%
GCTGGACCTGGTGGAATTGC+AGG + Chr7:4715616-4715635 MsG0780036208.01.T01:CDS 60.0%
GGACCTGGTGGAATTGCAGG+AGG + Chr7:4715619-4715638 MsG0780036208.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 4714589 4716071 4714589 ID=MsG0780036208.01;Name=MsG0780036208.01
Chr7 mRNA 4714589 4716071 4714589 ID=MsG0780036208.01.T01;Parent=MsG0780036208.01;Name=MsG0780036208.01.T01;_AED=0.36;_eAED=0.41;_QI=0|0|0|1|1|1|3|0|340
Chr7 exon 4714589 4715086 4714589 ID=MsG0780036208.01.T01:exon:2651;Parent=MsG0780036208.01.T01
Chr7 exon 4715196 4715261 4715196 ID=MsG0780036208.01.T01:exon:2652;Parent=MsG0780036208.01.T01
Chr7 exon 4715613 4716071 4715613 ID=MsG0780036208.01.T01:exon:2653;Parent=MsG0780036208.01.T01
Chr7 CDS 4714589 4715086 4714589 ID=MsG0780036208.01.T01:cds;Parent=MsG0780036208.01.T01
Chr7 CDS 4715196 4715261 4715196 ID=MsG0780036208.01.T01:cds;Parent=MsG0780036208.01.T01
Chr7 CDS 4715613 4716071 4715613 ID=MsG0780036208.01.T01:cds;Parent=MsG0780036208.01.T01
Gene Sequence

>MsG0780036208.01.T01

ATGGAAACCTATATGTTACCTGATAACAATGGCAAAAGAGGTGAATATTCTGGTGGAGCTATATGGGGAAGTAGTCCATCTATTGATGCATCAAGAAACCATATATACATTGCCACTGGAAATTTGTACTCAGCTCCTTTACACATACGTCAATGTCAAGAAGAAGAAAATAATAAAAATTTAACAAGACCAACTCAACCTGATCAATGTGTTGAACCAGAAAATCATTCTAATTCAATCTTAGCACTTGATTTGTACGATGGTGAAATTAAATGGTACCATCAATTAGGTGGATATGATGTTTGGTTCCTTGCTTGTAATGATTTGTCAACACCTAATTGTCCTCCTGGACCTAACCCTGATGCTGATTTTGGAGAAGCACCAATGATGCTCACAATTGATGTAAATGGTACTAAACAAGATATTGTTGTTGCTGTACAAAAGAGTGGTTTTGCTTGGGCTTTGCACCGTCACAATGGCGACATCATTTGGTCTACGTCGATAAATGATTTTGTGATTGATTTAGAGGCCAATTTGCAAAATGTCGCGACACCACAACAACGGGAAGCTGGACCTGGTGGAATTGCAGGAGGTGGAACATGGGGAGCAGCAACAGACAAAGAAAGAGTTTATACAAACATAGCTAATTCAAATGCGAAGAATTTCACTCTTAAACCATCCAACAAGACAACAACGACCGGAGGTTGGGTAGCAATGGAAGCAAGTAGTGGCAAGATCTTATGGTCCATAGCTAACCCTAGTAATGCAACTGCTAATGGTCCTGTTAGTGTAGCTAATGGCATTGTCTTTGCAGGATCCACAAATAAGAAAGGACCTATCTATGCAATAACGGTAAGACTGGTGAAATTTTGTGGTCTTATGAGACTGGAGCAACTGTGTATGGTGGTATTTCAATTAACAATGGTTGCATATATCTTGGAAATGGTTATACTCTGGGTTTGGCAACGGTTATTGGAGGCCTTACTGGTGGTACTTCTCTTTATGCCTTTTGTGTTTAAGTAA

Protein sequence

>MsG0780036208.01.T01

METYMLPDNNGKRGEYSGGAIWGSSPSIDASRNHIYIATGNLYSAPLHIRQCQEEENNKNLTRPTQPDQCVEPENHSNSILALDLYDGEIKWYHQLGGYDVWFLACNDLSTPNCPPGPNPDADFGEAPMMLTIDVNGTKQDIVVAVQKSGFAWALHRHNGDIIWSTSINDFVIDLEANLQNVATPQQREAGPGGIAGGGTWGAATDKERVYTNIANSNAKNFTLKPSNKTTTTGGWVAMEASSGKILWSIANPSNATANGPVSVANGIVFAGSTNKKGPIYAITVRLVKFCGLMRLEQLCMVVFQLTMVAYILEMVILWVWQRLLEALLVVLLFMPFVFK*