AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029712.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029712.01.T01 MTR_5g091240 84.191 816 70 4 20 787 36 840 0.0 1391
MsG0580029712.01.T01 MTR_5g091230 59.832 595 132 11 64 613 14 546 0.0 654
MsG0580029712.01.T01 MTR_5g091230 40.086 464 181 13 363 787 139 544 2.35e-74 258
MsG0580029712.01.T01 MTR_5g091200 62.248 347 116 5 20 361 39 375 8.67e-135 418
MsG0580029712.01.T01 MTR_5g091200 48.466 163 60 6 527 670 214 371 1.08e-31 129
MsG0580029712.01.T01 MTR_5g091200 41.667 168 79 5 363 515 208 371 2.60e-25 110
MsG0580029712.01.T01 MTR_3g046880 59.249 346 126 5 20 358 63 400 3.07e-121 383
MsG0580029712.01.T01 MTR_3g046880 44.172 163 67 6 527 668 238 397 3.95e-25 110
MsG0580029712.01.T01 MTR_3g046880 34.524 168 89 4 363 512 232 396 1.38e-16 84.3
MsG0580029712.01.T01 MTR_8g099555 30.748 361 203 8 1 336 1 339 1.17e-38 148
MsG0580029712.01.T01 MTR_5g028370 31.025 361 190 10 1 330 1 333 6.63e-34 134
MsG0580029712.01.T01 MTR_5g028370 31.025 361 190 10 1 330 13 345 7.17e-34 134
MsG0580029712.01.T01 MTR_7g060420 45.098 102 50 1 1083 1184 949 1044 4.29e-16 84.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029712.01.T01 AT5G50890 54.412 340 145 6 20 352 68 404 1.30e-112 360
MsG0580029712.01.T01 AT5G50890 36.747 166 78 9 527 667 243 406 2.32e-14 77.4
MsG0580029712.01.T01 AT5G50890 32.353 170 95 6 363 512 237 406 1.59e-12 71.6
MsG0580029712.01.T01 AT5G24230 29.254 335 189 7 23 327 38 354 5.65e-31 126
MsG0580029712.01.T01 AT5G24230 29.254 335 189 7 23 327 38 354 5.65e-31 126
MsG0580029712.01.T01 AT5G24230 29.254 335 189 7 23 327 38 354 5.65e-31 126
MsG0580029712.01.T01 AT2G05260 27.457 346 196 8 23 333 25 350 2.97e-29 121
MsG0580029712.01.T01 AT2G05260 37.640 178 97 3 23 196 25 192 6.36e-29 119
MsG0580029712.01.T01 AT4G10955 28.333 360 218 13 1 336 2 345 8.55e-29 119
MsG0580029712.01.T01 AT4G10955 28.333 360 218 13 1 336 2 345 8.55e-29 119
MsG0580029712.01.T01 AT5G24220 27.164 335 192 8 23 330 41 350 1.09e-27 117
MsG0580029712.01.T01 AT5G24180 26.879 346 186 12 23 333 39 352 4.97e-25 109
MsG0580029712.01.T01 AT5G24200 30.029 343 167 10 24 328 25 332 4.50e-23 102
MsG0580029712.01.T01 AT5G24200 30.029 343 167 10 24 328 25 332 4.50e-23 102
MsG0580029712.01.T01 AT5G24200 30.029 343 167 10 24 328 25 332 4.50e-23 102
MsG0580029712.01.T01 AT5G24210 28.571 336 182 11 24 328 30 338 9.90e-22 99.0
MsG0580029712.01.T01 AT5G24210 28.571 336 182 11 24 328 30 338 9.90e-22 99.0
MsG0580029712.01.T01 AT5G24210 28.571 336 182 11 24 328 30 338 9.90e-22 99.0

Find 254 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAGCTGTTCAACGTATT+TGG 0.125304 5:+101084551 MsG0580029712.01.T01:CDS
AATATATGATTTGACTTAAT+TGG 0.151155 5:-101085507 None:intergenic
GGCTTGAAGGATGCTGCTTT+TGG 0.189077 5:+101083115 MsG0580029712.01.T01:CDS
CATGAGCTTCGAGAAATTTC+TGG 0.197329 5:-101081682 None:intergenic
TCCCACAAAAGTTGGATTAT+TGG 0.209408 5:-101084866 None:intergenic
GTGATGTGCCTTTGCATAAA+AGG 0.223885 5:+101084668 MsG0580029712.01.T01:CDS
CCCACAAAAGTTGGATTATT+GGG 0.224878 5:-101084865 None:intergenic
GGGGCACCAATTGGTTTAAA+TGG 0.231548 5:-101081023 None:intergenic
GTAACATTCGATGGCAAAAT+TGG 0.232206 5:+101085066 MsG0580029712.01.T01:CDS
TTGTTCAAGTCTAGTGAATT+TGG 0.245956 5:-101084022 None:intergenic
AAAGAGTGTTGACGGGAAAT+TGG 0.255145 5:+101084483 MsG0580029712.01.T01:CDS
TGTCAGTTGTGATTCTAATT+TGG 0.271155 5:+101085644 MsG0580029712.01.T01:CDS
CAGAAAAGGAAGAATTTATA+TGG 0.274727 5:+101082341 MsG0580029712.01.T01:CDS
AAGAAATCTCTGCTGTTCTT+TGG 0.275359 5:-101082617 None:intergenic
GCTTGAAGGATACCGGTTAT+TGG 0.275423 5:+101082008 MsG0580029712.01.T01:CDS
TGCATTGGAGGGCATTCTTT+AGG 0.288580 5:+101081218 MsG0580029712.01.T01:CDS
CCGGTTATTGGGTGTGGAAA+TGG 0.295956 5:+101082020 MsG0580029712.01.T01:CDS
GATGGTTAGAAAGGAGAATA+TGG 0.298618 5:+101082087 MsG0580029712.01.T01:CDS
TCAATAAGAGTTCGTTATTT+CGG 0.301943 5:+101084725 MsG0580029712.01.T01:CDS
GAATTAAATGTTCTTGATCT+AGG 0.303865 5:+101085387 MsG0580029712.01.T01:CDS
ATGATTCAGACTTCATTATC+TGG 0.304514 5:+101083094 MsG0580029712.01.T01:intron
CATCGCCAATGTGGAGAATA+TGG 0.306203 5:+101081607 MsG0580029712.01.T01:CDS
GCCTCGTTTATCGCGCTTGA+TGG 0.306679 5:+101081484 MsG0580029712.01.T01:CDS
TGCCTTCACTGTCAGGCCTC+AGG 0.308352 5:+101082938 MsG0580029712.01.T01:CDS
CAAAATGAAATGATTTGCTT+TGG 0.309624 5:-101085726 None:intergenic
GAGAAGTGACATATTATGTT+TGG 0.311865 5:+101081876 MsG0580029712.01.T01:CDS
CTTCCTTGCAGCTCATGGTT+TGG 0.319831 5:+101082168 MsG0580029712.01.T01:CDS
AAAGAGAGCAGAAATTGATT+TGG 0.319903 5:+101084636 MsG0580029712.01.T01:CDS
TATAATGTCAGTTATATTCA+TGG 0.321487 5:+101080576 MsG0580029712.01.T01:CDS
CATCTTTAGCCCATGCCTTA+GGG 0.322185 5:+101084701 MsG0580029712.01.T01:CDS
CTTGAAGGATACCGGTTATT+GGG 0.330056 5:+101082009 MsG0580029712.01.T01:CDS
CATTCTTTAGGTGCTGGATT+TGG 0.332747 5:+101081230 MsG0580029712.01.T01:CDS
GCTTCATTGTGCTCATTAGA+AGG 0.334639 5:-101081632 None:intergenic
GCTATGAGCCTTGGAAATAT+TGG 0.338194 5:+101081332 MsG0580029712.01.T01:CDS
TCATGATGATATTTCAGTTA+TGG 0.339133 5:+101083922 MsG0580029712.01.T01:CDS
GCATCTTTAGCCCATGCCTT+AGG 0.339419 5:+101084700 MsG0580029712.01.T01:CDS
GAGAAAAGGCTGAATATGTT+TGG 0.339958 5:+101081354 MsG0580029712.01.T01:CDS
TCATAAAAGAGCCTGCTAAA+AGG 0.343475 5:+101085103 MsG0580029712.01.T01:CDS
CAATTGGACCACGGCATAAC+CGG 0.343829 5:-101082965 None:intergenic
TGCTGAAGTTCTAAATCATT+TGG 0.347676 5:-101082202 None:intergenic
GGTTTGATACCTCAGTTATC+TGG 0.350558 5:+101082454 MsG0580029712.01.T01:CDS
TTCAAACCATTTAAACCAAT+TGG 0.351269 5:+101081017 MsG0580029712.01.T01:CDS
AGATCAAGAACATTTAATTC+AGG 0.352721 5:-101085384 None:intergenic
ATTCAAATCTATTGCAACTA+AGG 0.362601 5:-101083969 None:intergenic
AGCTGGGTGCCTTCACTGTC+AGG 0.364707 5:+101082931 MsG0580029712.01.T01:CDS
TATCCTTCAAGCTAGATAAC+TGG 0.365811 5:-101081997 None:intergenic
TCAAAATCTCTTCGCATTGT+AGG 0.366852 5:-101081086 None:intergenic
CGCTTGATGGATGCTTGTTT+AGG 0.369232 5:+101081497 MsG0580029712.01.T01:CDS
TGCTATAAAGCCTTTCTTGA+AGG 0.370936 5:+101084783 MsG0580029712.01.T01:CDS
TGGATTATTGGGTATGCTAT+TGG 0.373228 5:-101084854 None:intergenic
AAAATGAAATGATTTGCTTT+GGG 0.373280 5:-101085725 None:intergenic
ATGAGTTTGCTATCATGAAT+AGG 0.374508 5:-101082691 None:intergenic
GTGGCTAATGAAACATAATA+TGG 0.377198 5:-101081836 None:intergenic
AAGAGTGTTGACGGGAAATT+GGG 0.378578 5:+101084484 MsG0580029712.01.T01:CDS
TTTATGTTAACAAGAATGAT+TGG 0.381468 5:+101081543 MsG0580029712.01.T01:CDS
CAAACGGGAAGTGAAATAAA+AGG 0.381800 5:-101082775 None:intergenic
TCTTCAAGTGGGAAAGGAAT+TGG 0.386231 5:+101081253 MsG0580029712.01.T01:CDS
TGTTGCTTGGGAATGCTTGA+AGG 0.386263 5:+101081124 MsG0580029712.01.T01:CDS
ATTGAAGACACAACAATTGC+TGG 0.390386 5:-101085771 None:intergenic
ACATTTAATTCAGGAGAATT+CGG 0.394892 5:-101085375 None:intergenic
GACTTCAGGTATAAGTTTGA+TGG 0.395063 5:+101081964 MsG0580029712.01.T01:CDS
CAAATTTGTTTACTGTCTCC+AGG 0.397324 5:+101082134 MsG0580029712.01.T01:CDS
CAGGTATAAGTTTGATGGGT+TGG 0.400012 5:+101081969 MsG0580029712.01.T01:CDS
TTATCTTGTTGAATAAATAT+CGG 0.400979 5:-101085264 None:intergenic
TGTACTTTCTTGAACTTGAT+AGG 0.401899 5:+101080847 MsG0580029712.01.T01:CDS
TGCCATGTGTCTTGCAGAAA+AGG 0.402782 5:+101082327 MsG0580029712.01.T01:CDS
TGTTACGTCCCAAGGTGTAT+TGG 0.407057 5:-101082740 None:intergenic
GCTTGAAGAATGTAGCTTAT+CGG 0.408674 5:+101082476 MsG0580029712.01.T01:CDS
GACTTCATTATCTGGCTTGA+AGG 0.411218 5:+101083102 MsG0580029712.01.T01:intron
CGGTTATTGGGTGTGGAAAT+GGG 0.414784 5:+101082021 MsG0580029712.01.T01:CDS
CTTTCTTGAACTTGATAGGC+AGG 0.417473 5:+101080851 MsG0580029712.01.T01:CDS
GAATCACAACTGACATTTGT+TGG 0.421370 5:-101085636 None:intergenic
GAACACTGGTACACCTTCTC+AGG 0.421632 5:+101081796 MsG0580029712.01.T01:CDS
CGGTTATGCCGTGGTCCAAT+TGG 0.422848 5:+101082966 MsG0580029712.01.T01:CDS
GGAGGGCATTCTTTAGGTGC+TGG 0.423182 5:+101081224 MsG0580029712.01.T01:CDS
TTGTGTGGGCTTATACTTGA+AGG 0.432168 5:-101080919 None:intergenic
TCTGAGTGCTAAAACAGCTC+TGG 0.433869 5:-101081045 None:intergenic
GTTTCACTTGCTATGAGCCT+TGG 0.434142 5:+101081323 MsG0580029712.01.T01:CDS
CTCTTGTCAGCATACAGATA+TGG 0.434564 5:-101083154 None:intergenic
TACTTCCGGTGTTGGTTTGA+AGG 0.434795 5:+101082432 MsG0580029712.01.T01:CDS
TTATACATTCCCACAAAAGT+TGG 0.435188 5:-101084874 None:intergenic
ATACGTTGAACAGCTAATAT+AGG 0.439247 5:-101084547 None:intergenic
CCATTTCCACACCCAATAAC+CGG 0.442745 5:-101082020 None:intergenic
TTTCGGTGCAATATTTGAAT+GGG 0.446693 5:+101080971 MsG0580029712.01.T01:CDS
AGCTTATCGGGTGTGCGAAT+GGG 0.447934 5:+101082489 MsG0580029712.01.T01:CDS
TCCTTCAAGCAGTGAATCTC+GGG 0.448588 5:+101082390 MsG0580029712.01.T01:CDS
CTTTGTGATAACATACAACT+TGG 0.450055 5:-101081654 None:intergenic
AAACTCATAAGCAGGCGAAT+TGG 0.451049 5:+101082706 MsG0580029712.01.T01:CDS
ACCCGAGATTCACTGCTTGA+AGG 0.451306 5:-101082391 None:intergenic
CAAAATCTCTTCGCATTGTA+GGG 0.452318 5:-101081085 None:intergenic
CTGAACTTCCTTGCAGCTCA+TGG 0.458712 5:+101082163 MsG0580029712.01.T01:CDS
CTTGAAGAATGTAGCTTATC+GGG 0.459208 5:+101082477 MsG0580029712.01.T01:CDS
CAGAAATTTCTCGAAGCTCA+TGG 0.459672 5:+101081683 MsG0580029712.01.T01:CDS
GACCACATCTTGACATTCTG+TGG 0.460734 5:-101084612 None:intergenic
TAGCTTATCGGGTGTGCGAA+TGG 0.460950 5:+101082488 MsG0580029712.01.T01:CDS
TTCCTTCAAGCAGTGAATCT+CGG 0.460978 5:+101082389 MsG0580029712.01.T01:CDS
CAAGTGTACCATTGAAGAGC+TGG 0.466299 5:+101082914 MsG0580029712.01.T01:CDS
CCTTGGAAATATTGGAGAAA+AGG 0.466462 5:+101081340 MsG0580029712.01.T01:CDS
TGTCAAGCTGTTAAGGAAAG+TGG 0.470430 5:+101085324 MsG0580029712.01.T01:CDS
GAAGAGATCATGAAAGCAAA+AGG 0.471880 5:+101085552 MsG0580029712.01.T01:CDS
TCAGTCATTACAACAACAAA+AGG 0.472762 5:+101085425 MsG0580029712.01.T01:CDS
TCTCTCTTGTTCCATCGGTA+TGG 0.476992 5:-101081583 None:intergenic
TGCTGAAGTTCTGCATCACT+TGG 0.477143 5:-101082667 None:intergenic
ATAGTAACCACTTGTGGTAG+TGG 0.477502 5:-101084397 None:intergenic
CTGCTCACAGCTTGCAACAA+TGG 0.478674 5:+101082641 MsG0580029712.01.T01:CDS
TTTATACACCAATACACCTT+GGG 0.480101 5:+101082732 MsG0580029712.01.T01:CDS
ACTTGAGGTTCACTACTTGA+AGG 0.482250 5:-101081398 None:intergenic
TTCTATGTGAATCGAATCTC+GGG 0.482776 5:-101085041 None:intergenic
CTGAGTGCTAAAACAGCTCT+GGG 0.484719 5:-101081044 None:intergenic
AGGATACCGGTTATTGGGTG+TGG 0.485209 5:+101082014 MsG0580029712.01.T01:CDS
CTGTCAGGCCTCAGGGATAC+CGG 0.485436 5:+101082946 MsG0580029712.01.T01:CDS
TTCATCAATCAATATTTGTG+TGG 0.487447 5:-101080934 None:intergenic
TCGGAGGCTGGCACATCAAA+CGG 0.487569 5:-101085356 None:intergenic
GCCTTCACTGTCAGGCCTCA+GGG 0.487725 5:+101082939 MsG0580029712.01.T01:CDS
TCTATACACCGGTTCACCTT+GGG 0.488752 5:+101082267 MsG0580029712.01.T01:CDS
TGTGAGATTTAAAGTAGCTA+TGG 0.489698 5:+101081151 MsG0580029712.01.T01:CDS
GGTTACAATACTTCCGGTGT+TGG 0.494372 5:+101082424 MsG0580029712.01.T01:CDS
AGCCATTGCAAGTCTTATAC+AGG 0.495279 5:+101080821 MsG0580029712.01.T01:CDS
GATGTTCTCTCTTGTTCCAT+CGG 0.496658 5:-101081588 None:intergenic
TTATCTAGCTTGAAGGATAC+CGG 0.497729 5:+101082001 MsG0580029712.01.T01:CDS
ACCCCAGTTATCTAGCTTGA+AGG 0.497805 5:+101081994 MsG0580029712.01.T01:CDS
ATTCAGGAGAATTCGGAGGC+TGG 0.497844 5:-101085368 None:intergenic
GGAGACTAAACCAATCCTTT+CGG 0.499425 5:+101085155 MsG0580029712.01.T01:CDS
CTCTATACACCGGTTCACCT+TGG 0.500163 5:+101082266 MsG0580029712.01.T01:CDS
ACTTCCGGTGTTGGTTTGAA+GGG 0.501655 5:+101082433 MsG0580029712.01.T01:CDS
CTGATACTATCGAGACAAAC+GGG 0.501736 5:-101082790 None:intergenic
TAATAGAGTGGCTGGTACAA+TGG 0.503429 5:+101085134 MsG0580029712.01.T01:CDS
TCATCAATCAATATTTGTGT+GGG 0.503887 5:-101080933 None:intergenic
TCTGATACTATCGAGACAAA+CGG 0.505540 5:-101082791 None:intergenic
ACATCATCATCATTAGTAAG+AGG 0.510216 5:-101084052 None:intergenic
AGCAGAAATGTATGCATTGG+AGG 0.512323 5:+101081206 MsG0580029712.01.T01:CDS
ACTTCAGGTATAAGTTTGAT+GGG 0.514160 5:+101081965 MsG0580029712.01.T01:CDS
GACTGTGTATATTCTTCTTG+AGG 0.515355 5:-101084100 None:intergenic
GAAGGCACCCAGCTCTTCAA+TGG 0.515579 5:-101082922 None:intergenic
TGATGAACTTGTTACTGTTG+TGG 0.516377 5:+101085461 MsG0580029712.01.T01:CDS
TACCCTCTGTCATGGACGTA+TGG 0.516677 5:+101085220 MsG0580029712.01.T01:CDS
TTCAAATCTATTGCAACTAA+GGG 0.523154 5:-101083968 None:intergenic
AATGATGGTTACAATACTTC+CGG 0.524409 5:+101082418 MsG0580029712.01.T01:CDS
TTCACTGCTTGAAGGAAGCA+TGG 0.524986 5:-101082383 None:intergenic
CTTTATACACCAATACACCT+TGG 0.524989 5:+101082731 MsG0580029712.01.T01:CDS
ACTAGTGTTAATAGAGTGGC+TGG 0.526202 5:+101085126 MsG0580029712.01.T01:CDS
TGTGTGCCTCATCATATAAG+TGG 0.526824 5:+101081911 MsG0580029712.01.T01:CDS
GGAAGCAGAAATGTATGCAT+TGG 0.529257 5:+101081203 MsG0580029712.01.T01:CDS
CAGCTCATGGTTTGGAACAA+TGG 0.530134 5:+101082176 MsG0580029712.01.T01:CDS
TTTCTATGTGAATCGAATCT+CGG 0.532420 5:-101085042 None:intergenic
CACAGAAGAGGAGGTTGACA+AGG 0.533386 5:+101082543 MsG0580029712.01.T01:CDS
TGCTCACAAATTTGCTATTG+CGG 0.533627 5:-101081757 None:intergenic
GTGCAATATTTGAATGGGAT+CGG 0.533820 5:+101080976 MsG0580029712.01.T01:CDS
ATCGAATCTCGGGCGAGCTA+CGG 0.534172 5:-101085031 None:intergenic
TGATTCTAATTTGGTGCAAG+AGG 0.536010 5:+101085653 MsG0580029712.01.T01:CDS
ATCCTTCAAGCTAGATAACT+GGG 0.536251 5:-101081996 None:intergenic
ATCTTTAGCCCATGCCTTAG+GGG 0.537301 5:+101084702 MsG0580029712.01.T01:CDS
GAATCTCGGGTGCTCAATGA+TGG 0.537378 5:+101082403 MsG0580029712.01.T01:CDS
TTATTTCGGCTTATGCAGTC+CGG 0.538943 5:+101084739 MsG0580029712.01.T01:CDS
AACGACGGACAAATGACTTC+AGG 0.539145 5:+101081950 MsG0580029712.01.T01:CDS
TCATTCACATTGATGAGAAG+TGG 0.539543 5:+101084899 MsG0580029712.01.T01:CDS
CATAGAAATGTAACATTCGA+TGG 0.543350 5:+101085057 MsG0580029712.01.T01:CDS
ATGATAGCAAACTCATAAGC+AGG 0.543690 5:+101082698 MsG0580029712.01.T01:CDS
AGCATTCCCAAGCAACAAAA+CGG 0.544874 5:-101081118 None:intergenic
CAACTTAAATCTTTGAACAC+TGG 0.546107 5:+101081782 MsG0580029712.01.T01:CDS
GCTCTAGTGACCGAAAGGAT+TGG 0.546715 5:-101085165 None:intergenic
GTATGGCCGATAGAAGATAT+CGG 0.547446 5:+101085237 MsG0580029712.01.T01:CDS
TTTCTAGTGCCACATCCCAC+TGG 0.548219 5:-101084153 None:intergenic
TGTGTATATTCTTCTTGAGG+TGG 0.548383 5:-101084097 None:intergenic
TGTCGTGAAGATGGTTAGAA+AGG 0.551376 5:+101082078 MsG0580029712.01.T01:CDS
TGCTGGATTTGGTCTTCAAG+TGG 0.552254 5:+101081241 MsG0580029712.01.T01:CDS
TCTTTCAAGTAGTGAAACTC+AGG 0.553879 5:+101082861 MsG0580029712.01.T01:CDS
TTGCTTACGCAATGACGCGT+CGG 0.553896 5:-101084976 None:intergenic
AAGGAAGTTCAGTTGTTCCC+TGG 0.555227 5:-101082152 None:intergenic
AAGCTCATGGCTTGAAACAA+TGG 0.556200 5:+101081696 MsG0580029712.01.T01:CDS
TGTGTGGGCTTATACTTGAA+GGG 0.556397 5:-101080918 None:intergenic
GTGATGGAAAACTCATAAGA+AGG 0.559123 5:+101082233 MsG0580029712.01.T01:CDS
AAATCAGTGTATGATACGTA+TGG 0.561870 5:+101081182 MsG0580029712.01.T01:CDS
GCACTAGAAAACTCAGATGA+TGG 0.565112 5:+101084166 MsG0580029712.01.T01:CDS
TAGAAAAGTACTACCTGAGA+AGG 0.565700 5:-101081809 None:intergenic
AAATTTGTTTACTGTCTCCA+GGG 0.565902 5:+101082135 MsG0580029712.01.T01:CDS
ATTTGGTCTTCAAGTGGGAA+AGG 0.566357 5:+101081247 MsG0580029712.01.T01:CDS
CTTATTGACCCCTAAGGCAT+GGG 0.567948 5:-101084710 None:intergenic
TCTAATATTTATGTGACGAG+TGG 0.571796 5:-101081855 None:intergenic
GGCAAAGGAAATGATTAATG+TGG 0.573590 5:+101081274 MsG0580029712.01.T01:CDS
CAAGAATTGTGGCACAGAAG+AGG 0.573673 5:+101082531 MsG0580029712.01.T01:CDS
TCTTATTGACCCCTAAGGCA+TGG 0.575379 5:-101084711 None:intergenic
CTTGACTTTACAAACGTGCA+TGG 0.576320 5:+101085530 MsG0580029712.01.T01:CDS
CAAAGTATTACCCTCTGTCA+TGG 0.577757 5:+101085212 MsG0580029712.01.T01:CDS
CGAACTCTTATTGACCCCTA+AGG 0.578468 5:-101084716 None:intergenic
CTGTATGCTAATGAGAATGT+TGG 0.580429 5:+101082052 MsG0580029712.01.T01:CDS
TGTTGGCGCTGTCGTGAAGA+TGG 0.583445 5:+101082069 MsG0580029712.01.T01:CDS
TCTCAATAACCAGTGGGATG+TGG 0.583858 5:+101084144 MsG0580029712.01.T01:CDS
TGGAAACGAGCAAAAGATTG+TGG 0.584705 5:+101084571 MsG0580029712.01.T01:CDS
GCTGGATTTGGTCTTCAAGT+GGG 0.586198 5:+101081242 MsG0580029712.01.T01:CDS
GGAGGTTGACAAGGAGAATG+TGG 0.588267 5:+101082552 MsG0580029712.01.T01:CDS
GATTTACCACTTATATGATG+AGG 0.590671 5:-101081917 None:intergenic
ACCACATCTTGACATTCTGT+GGG 0.593036 5:-101084611 None:intergenic
TGGGTTCCTCATCTGTATGT+TGG 0.593149 5:+101082508 MsG0580029712.01.T01:CDS
CTTCAGCAAACTATCCGTGA+TGG 0.594715 5:+101082217 MsG0580029712.01.T01:CDS
TATTGATTGATGAAAGAGAT+GGG 0.597435 5:+101080943 MsG0580029712.01.T01:CDS
AAGTGTACCATTGAAGAGCT+GGG 0.601631 5:+101082915 MsG0580029712.01.T01:CDS
GAGAATATGGATCATGAAGA+CGG 0.602100 5:+101082100 MsG0580029712.01.T01:CDS
CTGTATGTTGGCAAGAATTG+TGG 0.603147 5:+101082520 MsG0580029712.01.T01:CDS
CTCACAGCTTGCAACAATGG+TGG 0.604093 5:+101082644 MsG0580029712.01.T01:CDS
GGCCATACGTCCATGACAGA+GGG 0.605589 5:-101085222 None:intergenic
TAATCACGAGGAAGCTGATG+AGG 0.605828 5:+101084369 MsG0580029712.01.T01:CDS
TTCTCATTAGCATACAGAAG+AGG 0.607136 5:-101082046 None:intergenic
TAATAGCTCTAGTGACCGAA+AGG 0.612060 5:-101085170 None:intergenic
ACCTCAAGTCAGCATTGATG+TGG 0.612184 5:+101081412 MsG0580029712.01.T01:CDS
TTATTGATAGTAACCACTTG+TGG 0.613483 5:-101084403 None:intergenic
AGGATCCATATTCTCCACAT+TGG 0.613667 5:-101081612 None:intergenic
CAGGGATACCGGTTATGCCG+TGG 0.613998 5:+101082957 MsG0580029712.01.T01:CDS
AAGGACTAGTGTTAATAGAG+TGG 0.614577 5:+101085122 MsG0580029712.01.T01:CDS
TGCCTGTATAAGACTTGCAA+TGG 0.616517 5:-101080823 None:intergenic
GTGGTTACTATCAATAAGAG+AGG 0.617617 5:+101084409 MsG0580029712.01.T01:CDS
GATGGTTGACAAAGAGAACA+AGG 0.618389 5:+101083195 MsG0580029712.01.T01:CDS
TGGTGGAAAAGACGACAAGA+TGG 0.619277 5:+101083177 MsG0580029712.01.T01:CDS
GAATTGTGGCACAGAAGAGG+AGG 0.621076 5:+101082534 MsG0580029712.01.T01:CDS
TCCACATCAATGCTGACTTG+AGG 0.623615 5:-101081413 None:intergenic
CTCATGGTTTGGAACAATGG+TGG 0.626885 5:+101082179 MsG0580029712.01.T01:CDS
GGAATTCCGATATCTTCTAT+CGG 0.627614 5:-101085243 None:intergenic
AGTGGGAAAGGAATTGGCAA+AGG 0.630778 5:+101081259 MsG0580029712.01.T01:CDS
GCAGAAATGTATGCATTGGA+GGG 0.630869 5:+101081207 MsG0580029712.01.T01:CDS
GAGTGCTAAAACAGCTCTGG+GGG 0.631284 5:-101081042 None:intergenic
GTTCCAAACCATGAGCTGCA+AGG 0.631713 5:-101082171 None:intergenic
AAACAATGGTGGTCAAGTGA+CGG 0.632207 5:+101081710 MsG0580029712.01.T01:CDS
CAAATTAAATCTCTATACAC+CGG 0.632498 5:+101082256 MsG0580029712.01.T01:CDS
TTTAATTCAGGAGAATTCGG+AGG 0.637643 5:-101085372 None:intergenic
ATATTGATTGATGAAAGAGA+TGG 0.641336 5:+101080942 MsG0580029712.01.T01:CDS
TCCCACAGAATGTCAAGATG+TGG 0.641379 5:+101084610 MsG0580029712.01.T01:CDS
TCATCATCATTAGTAAGAGG+TGG 0.643495 5:-101084049 None:intergenic
TCCATCAAGCGCGATAAACG+AGG 0.644282 5:-101081485 None:intergenic
AAGAGAGAACATCGCCAATG+TGG 0.644761 5:+101081598 MsG0580029712.01.T01:CDS
TGATGTGGACGAGACTTATG+TGG 0.646267 5:+101081427 MsG0580029712.01.T01:CDS
CGGCCATACGTCCATGACAG+AGG 0.649285 5:-101085223 None:intergenic
GGACATGCCACTACCACAAG+TGG 0.650382 5:+101084390 MsG0580029712.01.T01:CDS
CTCATAGCAAGTGAAACAGA+AGG 0.653693 5:-101081317 None:intergenic
TCAAGAAGAATATACACAGT+CGG 0.655056 5:+101084102 MsG0580029712.01.T01:CDS
TCCCTGAGGCCTGACAGTGA+AGG 0.656091 5:-101082940 None:intergenic
TTCTTGTTAACATAAAGATG+AGG 0.656648 5:-101081536 None:intergenic
CTCATGGCTTGAAACAATGG+TGG 0.660620 5:+101081699 MsG0580029712.01.T01:CDS
TTCTTGCCAACATACAGATG+AGG 0.662002 5:-101082514 None:intergenic
AGACTTTCTCAATAACCAGT+GGG 0.662457 5:+101084138 MsG0580029712.01.T01:CDS
AAGACTTTCTCAATAACCAG+TGG 0.663149 5:+101084137 MsG0580029712.01.T01:CDS
CAAACCCTTCAAACCAACAC+CGG 0.663576 5:-101082437 None:intergenic
AAGAAAGCGTTGGAAAGACA+AGG 0.664969 5:+101085606 MsG0580029712.01.T01:CDS
ATAGCAAGTGAAACAGAAGG+TGG 0.668464 5:-101081314 None:intergenic
CTGTATGCTGACAAGAGTGG+TGG 0.669477 5:+101083160 MsG0580029712.01.T01:CDS
GGGTAGAACTGCAACACGAG+AGG 0.673446 5:+101084504 MsG0580029712.01.T01:CDS
AAATCTCAAATCATCAACGA+CGG 0.700893 5:+101081935 MsG0580029712.01.T01:CDS
TGAGTGCTAAAACAGCTCTG+GGG 0.702289 5:-101081043 None:intergenic
CCTAGGAACCAATTGGACCA+CGG 0.706088 5:-101082974 None:intergenic
TTCTTCAAGCCAGATAACTG+AGG 0.718042 5:-101082463 None:intergenic
CGGCATAACCGGTATCCCTG+AGG 0.720056 5:-101082954 None:intergenic
TCCTTCAAGCTAGATAACTG+GGG 0.720408 5:-101081995 None:intergenic
ATGGTTGACAAAGAGAACAA+GGG 0.722106 5:+101083196 MsG0580029712.01.T01:CDS
TGATGCTAATGATAATCACG+AGG 0.734370 5:+101084357 MsG0580029712.01.T01:CDS
TATCTGTATGCTGACAAGAG+TGG 0.771941 5:+101083157 MsG0580029712.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTATAAGTTTATTTTGT+GGG + Chr5:101085791-101085810 MsG0580029712.01.T01:three_prime_UTR 10.0%
!! TTATAAAAAATTGTGATAGA+AGG - Chr5:101084252-101084271 None:intergenic 15.0%
!! TTATCTTGTTGAATAAATAT+CGG - Chr5:101085267-101085286 None:intergenic 15.0%
!!! AACTTTTATAAGCAATTTTA+AGG - Chr5:101083897-101083916 None:intergenic 15.0%
!!! AATACCCTTATTTTATTTTT+TGG + Chr5:101083606-101083625 MsG0580029712.01.T01:intron 15.0%
!!! AATATATGATTTGACTTAAT+TGG - Chr5:101085510-101085529 None:intergenic 15.0%
!!! ACTTTTATAAGCAATTTTAA+GGG - Chr5:101083896-101083915 None:intergenic 15.0%
!!! CAATTTATAAGTTTATTTTG+TGG + Chr5:101085790-101085809 MsG0580029712.01.T01:three_prime_UTR 15.0%
!! AAACATCAAATAAAAAGGAA+TGG - Chr5:101083523-101083542 None:intergenic 20.0%
!! AAAGAAAAAGAATGCATAAT+TGG - Chr5:101084333-101084352 None:intergenic 20.0%
!! AATGAAAATAGTTGTAGATT+TGG + Chr5:101083578-101083597 MsG0580029712.01.T01:intron 20.0%
!! AGCTAAAACATCAAATAAAA+AGG - Chr5:101083528-101083547 None:intergenic 20.0%
!! GTAAGTAATAAATGTATTGA+GGG - Chr5:101083710-101083729 None:intergenic 20.0%
!! TATAATGTCAGTTATATTCA+TGG + Chr5:101080576-101080595 MsG0580029712.01.T01:CDS 20.0%
!! TGTAAGTAATAAATGTATTG+AGG - Chr5:101083711-101083730 None:intergenic 20.0%
!! TTTATGTTAACAAGAATGAT+TGG + Chr5:101081543-101081562 MsG0580029712.01.T01:CDS 20.0%
!!! AAAATGAAATGATTTGCTTT+GGG - Chr5:101085728-101085747 None:intergenic 20.0%
!!! AAGAAGAATTTTTATGGAAA+TGG + Chr5:101082818-101082837 MsG0580029712.01.T01:CDS 20.0%
!!! ATAATTGTTTTGTTTCAAAC+AGG + Chr5:101080775-101080794 MsG0580029712.01.T01:intron 20.0%
!!! ATTCATGGTTTTTTATTGTA+TGG + Chr5:101080591-101080610 MsG0580029712.01.T01:intron 20.0%
!!! GACAAAAAGAAGAATTTTTA+TGG + Chr5:101082812-101082831 MsG0580029712.01.T01:CDS 20.0%
!!! TTAAAAACCTCAAAAGTATA+AGG - Chr5:101083837-101083856 None:intergenic 20.0%
!!! TTATGCATTCTTTTTCTTTT+AGG + Chr5:101084334-101084353 MsG0580029712.01.T01:intron 20.0%
!!! TTTGAAACAAAACAATTATC+AGG - Chr5:101080774-101080793 None:intergenic 20.0%
!!! TTTTCCTTTTTTCAATTATG+AGG + Chr5:101083991-101084010 MsG0580029712.01.T01:CDS 20.0%
! ACATTTAATTCAGGAGAATT+CGG - Chr5:101085378-101085397 None:intergenic 25.0%
! AGATCAAGAACATTTAATTC+AGG - Chr5:101085387-101085406 None:intergenic 25.0%
! ATCAAATAAAAAGGAATGGA+GGG - Chr5:101083519-101083538 None:intergenic 25.0%
! ATTCAAATCTATTGCAACTA+AGG - Chr5:101083972-101083991 None:intergenic 25.0%
! CAAATTAAATCTCTATACAC+CGG + Chr5:101082256-101082275 MsG0580029712.01.T01:CDS 25.0%
! CAGAAAAGGAAGAATTTATA+TGG + Chr5:101082341-101082360 MsG0580029712.01.T01:CDS 25.0%
! CATTGTTAAGATTGAAAACT+TGG - Chr5:101083288-101083307 None:intergenic 25.0%
! GAAGTAAAAAAAGGATCAAA+TGG + Chr5:101082289-101082308 MsG0580029712.01.T01:CDS 25.0%
! GAATTAAATGTTCTTGATCT+AGG + Chr5:101085387-101085406 MsG0580029712.01.T01:CDS 25.0%
! GCAGCCAAAAAATAAAATAA+GGG - Chr5:101083613-101083632 None:intergenic 25.0%
! TCAATAAGAGTTCGTTATTT+CGG + Chr5:101084725-101084744 MsG0580029712.01.T01:CDS 25.0%
! TCATCAATCAATATTTGTGT+GGG - Chr5:101080936-101080955 None:intergenic 25.0%
! TCATGATGATATTTCAGTTA+TGG + Chr5:101083922-101083941 MsG0580029712.01.T01:CDS 25.0%
! TTCAAACCATTTAAACCAAT+TGG + Chr5:101081017-101081036 MsG0580029712.01.T01:CDS 25.0%
! TTCAAATCTATTGCAACTAA+GGG - Chr5:101083971-101083990 None:intergenic 25.0%
! TTCATCAATCAATATTTGTG+TGG - Chr5:101080937-101080956 None:intergenic 25.0%
! TTCTTGTTAACATAAAGATG+AGG - Chr5:101081539-101081558 None:intergenic 25.0%
! TTGATACTTCTTAAAGCTAT+TGG - Chr5:101083376-101083395 None:intergenic 25.0%
! TTGTTTAGGAAGAGAAAAAT+GGG + Chr5:101081511-101081530 MsG0580029712.01.T01:CDS 25.0%
! TTTGCCTCATAATTGAAAAA+AGG - Chr5:101083998-101084017 None:intergenic 25.0%
!! ATATTGATTGATGAAAGAGA+TGG + Chr5:101080942-101080961 MsG0580029712.01.T01:CDS 25.0%
!! ATTTTGTTCCAAAAAAGACA+AGG + Chr5:101085696-101085715 MsG0580029712.01.T01:three_prime_UTR 25.0%
!! GTTTAAGTTCTTAAAACTCT+AGG + Chr5:101083340-101083359 MsG0580029712.01.T01:intron 25.0%
!! TATTGATTGATGAAAGAGAT+GGG + Chr5:101080943-101080962 MsG0580029712.01.T01:CDS 25.0%
!! TTAAATCCATTGTTAACTTG+AGG - Chr5:101083246-101083265 None:intergenic 25.0%
!!! ATATGAGATTCTAAAATGAG+TGG - Chr5:101083866-101083885 None:intergenic 25.0%
!!! ATTTTGAGAAGAAAAAAGCA+AGG - Chr5:101083646-101083665 None:intergenic 25.0%
!!! CAAAATGAAATGATTTGCTT+TGG - Chr5:101085729-101085748 None:intergenic 25.0%
!!! TATGAGATTCTAAAATGAGT+GGG - Chr5:101083865-101083884 None:intergenic 25.0%
!!! TGACACTTTTAAAAAGTGAA+AGG + Chr5:101083761-101083780 MsG0580029712.01.T01:intron 25.0%
!!! TTATTGAAAAAGAGTGTTGA+CGG + Chr5:101084475-101084494 MsG0580029712.01.T01:CDS 25.0%
AAAAAAGCAAGGAGTAATCA+TGG - Chr5:101083635-101083654 None:intergenic 30.0%
AAAGAGAGCAGAAATTGATT+TGG + Chr5:101084636-101084655 MsG0580029712.01.T01:CDS 30.0%
AAATCAGTGTATGATACGTA+TGG + Chr5:101081182-101081201 MsG0580029712.01.T01:CDS 30.0%
AAATCTCAAATCATCAACGA+CGG + Chr5:101081935-101081954 MsG0580029712.01.T01:CDS 30.0%
AAATCTTCTTAAATGAGCTG+TGG + Chr5:101083669-101083688 MsG0580029712.01.T01:intron 30.0%
AATCTTCTTAAATGAGCTGT+GGG + Chr5:101083670-101083689 MsG0580029712.01.T01:intron 30.0%
AATGATGGTTACAATACTTC+CGG + Chr5:101082418-101082437 MsG0580029712.01.T01:CDS 30.0%
ACAGCTCATTTAAGAAGATT+TGG - Chr5:101083670-101083689 None:intergenic 30.0%
ACATCATCATCATTAGTAAG+AGG - Chr5:101084055-101084074 None:intergenic 30.0%
ACTTCAGGTATAAGTTTGAT+GGG + Chr5:101081965-101081984 MsG0580029712.01.T01:CDS 30.0%
AGAAGGAAATAAAGTGAAGA+TGG - Chr5:101084235-101084254 None:intergenic 30.0%
AGCTGATTACACACATATTA+AGG + Chr5:101083544-101083563 MsG0580029712.01.T01:intron 30.0%
ATGATTCAGACTTCATTATC+TGG + Chr5:101083094-101083113 MsG0580029712.01.T01:intron 30.0%
CAACTTAAATCTTTGAACAC+TGG + Chr5:101081782-101081801 MsG0580029712.01.T01:CDS 30.0%
CATAGAAATGTAACATTCGA+TGG + Chr5:101085057-101085076 MsG0580029712.01.T01:CDS 30.0%
CATCAAATAAAAAGGAATGG+AGG - Chr5:101083520-101083539 None:intergenic 30.0%
CTTGTTTAGGAAGAGAAAAA+TGG + Chr5:101081510-101081529 MsG0580029712.01.T01:CDS 30.0%
CTTTGTGATAACATACAACT+TGG - Chr5:101081657-101081676 None:intergenic 30.0%
GAGAAGTGACATATTATGTT+TGG + Chr5:101081876-101081895 MsG0580029712.01.T01:CDS 30.0%
GATTTACCACTTATATGATG+AGG - Chr5:101081920-101081939 None:intergenic 30.0%
GGCAGCCAAAAAATAAAATA+AGG - Chr5:101083614-101083633 None:intergenic 30.0%
GTGGCTAATGAAACATAATA+TGG - Chr5:101081839-101081858 None:intergenic 30.0%
TAAATAGAAGTGAGGTGAAA+TGG + Chr5:101083413-101083432 MsG0580029712.01.T01:intron 30.0%
TATTAGCTGTTCAACGTATT+TGG + Chr5:101084551-101084570 MsG0580029712.01.T01:CDS 30.0%
TATTCGTCTAAATAGAAGTG+AGG + Chr5:101083405-101083424 MsG0580029712.01.T01:intron 30.0%
TCAAGAAGAATATACACAGT+CGG + Chr5:101084102-101084121 MsG0580029712.01.T01:CDS 30.0%
TCAGTCATTACAACAACAAA+AGG + Chr5:101085425-101085444 MsG0580029712.01.T01:CDS 30.0%
TCTAATATTTATGTGACGAG+TGG - Chr5:101081858-101081877 None:intergenic 30.0%
TGGAAATATAACACTAACTG+CGG - Chr5:101084313-101084332 None:intergenic 30.0%
TGTACTTTCTTGAACTTGAT+AGG + Chr5:101080847-101080866 MsG0580029712.01.T01:CDS 30.0%
TGTCAGTTGTGATTCTAATT+TGG + Chr5:101085644-101085663 MsG0580029712.01.T01:CDS 30.0%
TTATACATTCCCACAAAAGT+TGG - Chr5:101084877-101084896 None:intergenic 30.0%
TTGTTCAAGTCTAGTGAATT+TGG - Chr5:101084025-101084044 None:intergenic 30.0%
TTTATACACCAATACACCTT+GGG + Chr5:101082732-101082751 MsG0580029712.01.T01:CDS 30.0%
TTTCTATGTGAATCGAATCT+CGG - Chr5:101085045-101085064 None:intergenic 30.0%
TTTGCTGGAAAAAAAAACGT+GGG - Chr5:101083797-101083816 None:intergenic 30.0%
! AAAACCTCAAAAGTATAAGG+TGG - Chr5:101083834-101083853 None:intergenic 30.0%
! AAAATGAACGTGGAAGTATA+AGG + Chr5:101083738-101083757 MsG0580029712.01.T01:intron 30.0%
! AAACCTCAAAAGTATAAGGT+GGG - Chr5:101083833-101083852 None:intergenic 30.0%
! AAATTTGTTTACTGTCTCCA+GGG + Chr5:101082135-101082154 MsG0580029712.01.T01:CDS 30.0%
! AGAATTTTGTCAAGCTGTTA+AGG + Chr5:101085317-101085336 MsG0580029712.01.T01:CDS 30.0%
! ATTGTTGTCCTTTTATGCAA+AGG - Chr5:101084679-101084698 None:intergenic 30.0%
! GGAAATACTAAATGTTTTGC+TGG - Chr5:101083812-101083831 None:intergenic 30.0%
! TACTTTTATATCCATACCGA+TGG + Chr5:101081572-101081591 MsG0580029712.01.T01:CDS 30.0%
! TATGTCTCTTCTTTTGTCAT+TGG - Chr5:101084446-101084465 None:intergenic 30.0%
! TGTGAGATTTAAAGTAGCTA+TGG + Chr5:101081151-101081170 MsG0580029712.01.T01:CDS 30.0%
! TTATTGATAGTAACCACTTG+TGG - Chr5:101084406-101084425 None:intergenic 30.0%
! TTCTTATGAGTTTTCCATCA+CGG - Chr5:101082234-101082253 None:intergenic 30.0%
! TTGTTTTCTTCCTTCAAGAA+AGG - Chr5:101084796-101084815 None:intergenic 30.0%
! TTTCGGTGCAATATTTGAAT+GGG + Chr5:101080971-101080990 MsG0580029712.01.T01:CDS 30.0%
! TTTTGCTGGAAAAAAAAACG+TGG - Chr5:101083798-101083817 None:intergenic 30.0%
!! ATGAGTTTGCTATCATGAAT+AGG - Chr5:101082694-101082713 None:intergenic 30.0%
!! TATTGAAAAAGAGTGTTGAC+GGG + Chr5:101084476-101084495 MsG0580029712.01.T01:CDS 30.0%
!! TGCTGAAGTTCTAAATCATT+TGG - Chr5:101082205-101082224 None:intergenic 30.0%
!! TTTTCGGTGCAATATTTGAA+TGG + Chr5:101080970-101080989 MsG0580029712.01.T01:CDS 30.0%
!!! ATACTTCCACGTTCATTTTT+TGG - Chr5:101083737-101083756 None:intergenic 30.0%
!!! GGATTTATCCTTGTCTTTTT+TGG - Chr5:101085707-101085726 None:intergenic 30.0%
!!! TTGTTTTGTTTCAAACAGGA+AGG + Chr5:101080779-101080798 MsG0580029712.01.T01:intron 30.0%
AAGAAATCTCTGCTGTTCTT+TGG - Chr5:101082620-101082639 None:intergenic 35.0%
AAGACTTTCTCAATAACCAG+TGG + Chr5:101084137-101084156 MsG0580029712.01.T01:CDS 35.0%
AAGCAAAAACTTTCTCCCAA+AGG + Chr5:101084993-101085012 MsG0580029712.01.T01:CDS 35.0%
ACACTTCCAAAAAATGAACG+TGG + Chr5:101083728-101083747 MsG0580029712.01.T01:intron 35.0%
AGACTTTCTCAATAACCAGT+GGG + Chr5:101084138-101084157 MsG0580029712.01.T01:CDS 35.0%
ATCCTTCAAGCTAGATAACT+GGG - Chr5:101081999-101082018 None:intergenic 35.0%
ATGATAGCAAACTCATAAGC+AGG + Chr5:101082698-101082717 MsG0580029712.01.T01:CDS 35.0%
ATGGTTGACAAAGAGAACAA+GGG + Chr5:101083196-101083215 MsG0580029712.01.T01:CDS 35.0%
ATTGAAGACACAACAATTGC+TGG - Chr5:101085774-101085793 None:intergenic 35.0%
CAAAATCTCTTCGCATTGTA+GGG - Chr5:101081088-101081107 None:intergenic 35.0%
CAAACGGGAAGTGAAATAAA+AGG - Chr5:101082778-101082797 None:intergenic 35.0%
CCCACAAAAGTTGGATTATT+GGG - Chr5:101084868-101084887 None:intergenic 35.0%
CCTTGGAAATATTGGAGAAA+AGG + Chr5:101081340-101081359 MsG0580029712.01.T01:CDS 35.0%
CTGTATGCTAATGAGAATGT+TGG + Chr5:101082052-101082071 MsG0580029712.01.T01:CDS 35.0%
CTTGAAGAATGTAGCTTATC+GGG + Chr5:101082477-101082496 MsG0580029712.01.T01:CDS 35.0%
CTTGTTCTTCAGTATTTCCA+AGG - Chr5:101083038-101083057 None:intergenic 35.0%
CTTTATACACCAATACACCT+TGG + Chr5:101082731-101082750 MsG0580029712.01.T01:CDS 35.0%
GAAGAGATCATGAAAGCAAA+AGG + Chr5:101085552-101085571 MsG0580029712.01.T01:CDS 35.0%
GAATCACAACTGACATTTGT+TGG - Chr5:101085639-101085658 None:intergenic 35.0%
GACTGTGTATATTCTTCTTG+AGG - Chr5:101084103-101084122 None:intergenic 35.0%
GACTTCAGGTATAAGTTTGA+TGG + Chr5:101081964-101081983 MsG0580029712.01.T01:CDS 35.0%
GAGAAAAGGCTGAATATGTT+TGG + Chr5:101081354-101081373 MsG0580029712.01.T01:CDS 35.0%
GAGAATATGGATCATGAAGA+CGG + Chr5:101082100-101082119 MsG0580029712.01.T01:CDS 35.0%
GAGCAGTACTCATAATAAGA+TGG - Chr5:101084283-101084302 None:intergenic 35.0%
GATAAATACCTAAGTTGCCT+AGG - Chr5:101082994-101083013 None:intergenic 35.0%
GATGGTTAGAAAGGAGAATA+TGG + Chr5:101082087-101082106 MsG0580029712.01.T01:CDS 35.0%
GCTTGAAGAATGTAGCTTAT+CGG + Chr5:101082476-101082495 MsG0580029712.01.T01:CDS 35.0%
GGAAATATAACACTAACTGC+GGG - Chr5:101084312-101084331 None:intergenic 35.0%
GGAATTCCGATATCTTCTAT+CGG - Chr5:101085246-101085265 None:intergenic 35.0%
GGCAAAGGAAATGATTAATG+TGG + Chr5:101081274-101081293 MsG0580029712.01.T01:CDS 35.0%
GTAACATTCGATGGCAAAAT+TGG + Chr5:101085066-101085085 MsG0580029712.01.T01:CDS 35.0%
GTGCAATATTTGAATGGGAT+CGG + Chr5:101080976-101080995 MsG0580029712.01.T01:CDS 35.0%
GTGGTTACTATCAATAAGAG+AGG + Chr5:101084409-101084428 MsG0580029712.01.T01:CDS 35.0%
TATCCTTCAAGCTAGATAAC+TGG - Chr5:101082000-101082019 None:intergenic 35.0%
TCAAAATCTCTTCGCATTGT+AGG - Chr5:101081089-101081108 None:intergenic 35.0%
TCACCTTGGGAAGTAAAAAA+AGG + Chr5:101082280-101082299 MsG0580029712.01.T01:CDS 35.0%
TCATAAAAGAGCCTGCTAAA+AGG + Chr5:101085103-101085122 MsG0580029712.01.T01:CDS 35.0%
TCATCATCATTAGTAAGAGG+TGG - Chr5:101084052-101084071 None:intergenic 35.0%
TCATTCACATTGATGAGAAG+TGG + Chr5:101084899-101084918 MsG0580029712.01.T01:CDS 35.0%
TCCCACAAAAGTTGGATTAT+TGG - Chr5:101084869-101084888 None:intergenic 35.0%
TCTGATACTATCGAGACAAA+CGG - Chr5:101082794-101082813 None:intergenic 35.0%
TGATGCTAATGATAATCACG+AGG + Chr5:101084357-101084376 MsG0580029712.01.T01:CDS 35.0%
TGCTATAAAGCCTTTCTTGA+AGG + Chr5:101084783-101084802 MsG0580029712.01.T01:CDS 35.0%
TGGATTATTGGGTATGCTAT+TGG - Chr5:101084857-101084876 None:intergenic 35.0%
TGTGTATATTCTTCTTGAGG+TGG - Chr5:101084100-101084119 None:intergenic 35.0%
TGTTCCCTATGTTATTGCAA+AGG - Chr5:101083223-101083242 None:intergenic 35.0%
TTATGCAGTCCGGAAAAATA+CGG + Chr5:101084749-101084768 MsG0580029712.01.T01:CDS 35.0%
TTCTATGTGAATCGAATCTC+GGG - Chr5:101085044-101085063 None:intergenic 35.0%
TTCTCATTAGCATACAGAAG+AGG - Chr5:101082049-101082068 None:intergenic 35.0%
TTTAATTCAGGAGAATTCGG+AGG - Chr5:101085375-101085394 None:intergenic 35.0%
! AAGGACTAGTGTTAATAGAG+TGG + Chr5:101085122-101085141 MsG0580029712.01.T01:CDS 35.0%
! AATCTTTTTGTTACGTCCCA+AGG - Chr5:101082751-101082770 None:intergenic 35.0%
! ACACATGAAAAAGAAAGCGT+TGG + Chr5:101085596-101085615 MsG0580029712.01.T01:CDS 35.0%
! ACCCAATAATCCAACTTTTG+TGG + Chr5:101084864-101084883 MsG0580029712.01.T01:CDS 35.0%
! ACTTGGCATTTTGCAAACTA+TGG - Chr5:101083271-101083290 None:intergenic 35.0%
! CAAATTTGTTTACTGTCTCC+AGG + Chr5:101082134-101082153 MsG0580029712.01.T01:CDS 35.0%
! CCCAATAATCCAACTTTTGT+GGG + Chr5:101084865-101084884 MsG0580029712.01.T01:CDS 35.0%
! CCTTTTCTCCAATATTTCCA+AGG - Chr5:101081343-101081362 None:intergenic 35.0%
! GAAAGAGATGGGTCAATTTT+CGG + Chr5:101080954-101080973 MsG0580029712.01.T01:CDS 35.0%
! GCAGTAATTTTCTCATTTGC+AGG - Chr5:101082580-101082599 None:intergenic 35.0%
! GTGATGGAAAACTCATAAGA+AGG + Chr5:101082233-101082252 MsG0580029712.01.T01:CDS 35.0%
! TCTTTCAAGTAGTGAAACTC+AGG + Chr5:101082861-101082880 MsG0580029712.01.T01:CDS 35.0%
! TTAACACTAGTCCTTTTAGC+AGG - Chr5:101085117-101085136 None:intergenic 35.0%
! TTATCTAGCTTGAAGGATAC+CGG + Chr5:101082001-101082020 MsG0580029712.01.T01:CDS 35.0%
! TTTCCCACCTTATACTTTTG+AGG + Chr5:101083827-101083846 MsG0580029712.01.T01:intron 35.0%
!! AACGCTTTCTTTTTCATGTG+TGG - Chr5:101085597-101085616 None:intergenic 35.0%
!! TAGAAAAGTACTACCTGAGA+AGG - Chr5:101081812-101081831 None:intergenic 35.0%
!! TGATGAACTTGTTACTGTTG+TGG + Chr5:101085461-101085480 MsG0580029712.01.T01:CDS 35.0%
!! TGATTCTAATTTGGTGCAAG+AGG + Chr5:101085653-101085672 MsG0580029712.01.T01:CDS 35.0%
!! TGCTCACAAATTTGCTATTG+CGG - Chr5:101081760-101081779 None:intergenic 35.0%
!!! AGAGGTGTCATCACATTTTA+CGG + Chr5:101084522-101084541 MsG0580029712.01.T01:CDS 35.0%
!!! GATCCTTTTTTTACTTCCCA+AGG - Chr5:101082286-101082305 None:intergenic 35.0%
AAACAATGGTGGTCAAGTGA+CGG + Chr5:101081710-101081729 MsG0580029712.01.T01:CDS 40.0%
AAACTCATAAGCAGGCGAAT+TGG + Chr5:101082706-101082725 MsG0580029712.01.T01:CDS 40.0%
AAGCTCATGGCTTGAAACAA+TGG + Chr5:101081696-101081715 MsG0580029712.01.T01:CDS 40.0%
AAGTGTACCATTGAAGAGCT+GGG + Chr5:101082915-101082934 MsG0580029712.01.T01:CDS 40.0%
AATATAACACTAACTGCGGG+AGG - Chr5:101084309-101084328 None:intergenic 40.0%
ACCACATCTTGACATTCTGT+GGG - Chr5:101084614-101084633 None:intergenic 40.0%
ACTAGTGTTAATAGAGTGGC+TGG + Chr5:101085126-101085145 MsG0580029712.01.T01:CDS 40.0%
ACTTGAGGTTCACTACTTGA+AGG - Chr5:101081401-101081420 None:intergenic 40.0%
AGCAGAAATGTATGCATTGG+AGG + Chr5:101081206-101081225 MsG0580029712.01.T01:CDS 40.0%
AGCATTCCCAAGCAACAAAA+CGG - Chr5:101081121-101081140 None:intergenic 40.0%
AGGATCCATATTCTCCACAT+TGG - Chr5:101081615-101081634 None:intergenic 40.0%
AGGGTCCTTTGCAATAACAT+AGG + Chr5:101083215-101083234 MsG0580029712.01.T01:intron 40.0%
ATAGCAAGTGAAACAGAAGG+TGG - Chr5:101081317-101081336 None:intergenic 40.0%
ATAGTAACCACTTGTGGTAG+TGG - Chr5:101084400-101084419 None:intergenic 40.0%
CAGAAATTTCTCGAAGCTCA+TGG + Chr5:101081683-101081702 MsG0580029712.01.T01:CDS 40.0%
CAGCCAAAAACATGACCTTT+GGG - Chr5:101085011-101085030 None:intergenic 40.0%
CATGAGCTTCGAGAAATTTC+TGG - Chr5:101081685-101081704 None:intergenic 40.0%
CTCATAGCAAGTGAAACAGA+AGG - Chr5:101081320-101081339 None:intergenic 40.0%
CTCTTGTCAGCATACAGATA+TGG - Chr5:101083157-101083176 None:intergenic 40.0%
CTGATACTATCGAGACAAAC+GGG - Chr5:101082793-101082812 None:intergenic 40.0%
CTGTATGTTGGCAAGAATTG+TGG + Chr5:101082520-101082539 MsG0580029712.01.T01:CDS 40.0%
CTTGACTTTACAAACGTGCA+TGG + Chr5:101085530-101085549 MsG0580029712.01.T01:CDS 40.0%
CTTTCTTGAACTTGATAGGC+AGG + Chr5:101080851-101080870 MsG0580029712.01.T01:CDS 40.0%
GATGGTTGACAAAGAGAACA+AGG + Chr5:101083195-101083214 MsG0580029712.01.T01:CDS 40.0%
GATGTTCTCTCTTGTTCCAT+CGG - Chr5:101081591-101081610 None:intergenic 40.0%
GCACTAGAAAACTCAGATGA+TGG + Chr5:101084166-101084185 MsG0580029712.01.T01:CDS 40.0%
GCAGAAATGTATGCATTGGA+GGG + Chr5:101081207-101081226 MsG0580029712.01.T01:CDS 40.0%
GCTATGAGCCTTGGAAATAT+TGG + Chr5:101081332-101081351 MsG0580029712.01.T01:CDS 40.0%
GCTTCATTGTGCTCATTAGA+AGG - Chr5:101081635-101081654 None:intergenic 40.0%
GGAACACCTCAAGTTAACAA+TGG + Chr5:101083237-101083256 MsG0580029712.01.T01:intron 40.0%
GGAAGCAGAAATGTATGCAT+TGG + Chr5:101081203-101081222 MsG0580029712.01.T01:CDS 40.0%
GGAGACTAAACCAATCCTTT+CGG + Chr5:101085155-101085174 MsG0580029712.01.T01:CDS 40.0%
GGGTCCTTTGCAATAACATA+GGG + Chr5:101083216-101083235 MsG0580029712.01.T01:intron 40.0%
GGTTTGATACCTCAGTTATC+TGG + Chr5:101082454-101082473 MsG0580029712.01.T01:CDS 40.0%
GTATGGCCGATAGAAGATAT+CGG + Chr5:101085237-101085256 MsG0580029712.01.T01:CDS 40.0%
GTGATGTGCCTTTGCATAAA+AGG + Chr5:101084668-101084687 MsG0580029712.01.T01:CDS 40.0%
TAAGTTGCCTAGGAACCAAT+TGG - Chr5:101082984-101083003 None:intergenic 40.0%
TAATAGAGTGGCTGGTACAA+TGG + Chr5:101085134-101085153 MsG0580029712.01.T01:CDS 40.0%
TATCTGTATGCTGACAAGAG+TGG + Chr5:101083157-101083176 MsG0580029712.01.T01:CDS 40.0%
TCCTTCAAGCTAGATAACTG+GGG - Chr5:101081998-101082017 None:intergenic 40.0%
TCTTCAAGTGGGAAAGGAAT+TGG + Chr5:101081253-101081272 MsG0580029712.01.T01:CDS 40.0%
TGCCTGTATAAGACTTGCAA+TGG - Chr5:101080826-101080845 None:intergenic 40.0%
TGGAAACGAGCAAAAGATTG+TGG + Chr5:101084571-101084590 MsG0580029712.01.T01:CDS 40.0%
TGTCAAGCTGTTAAGGAAAG+TGG + Chr5:101085324-101085343 MsG0580029712.01.T01:CDS 40.0%
TGTCGTGAAGATGGTTAGAA+AGG + Chr5:101082078-101082097 MsG0580029712.01.T01:CDS 40.0%
TGTGTGCCTCATCATATAAG+TGG + Chr5:101081911-101081930 MsG0580029712.01.T01:CDS 40.0%
TGTGTGGGCTTATACTTGAA+GGG - Chr5:101080921-101080940 None:intergenic 40.0%
TTATTTCGGCTTATGCAGTC+CGG + Chr5:101084739-101084758 MsG0580029712.01.T01:CDS 40.0%
TTCCTTCAAGCAGTGAATCT+CGG + Chr5:101082389-101082408 MsG0580029712.01.T01:CDS 40.0%
TTCTTCAAGCCAGATAACTG+AGG - Chr5:101082466-101082485 None:intergenic 40.0%
TTCTTGCCAACATACAGATG+AGG - Chr5:101082517-101082536 None:intergenic 40.0%
TTGAAGGGAATCCAAAAAGC+TGG - Chr5:101080906-101080925 None:intergenic 40.0%
TTGTGTGGGCTTATACTTGA+AGG - Chr5:101080922-101080941 None:intergenic 40.0%
! AATTGGTTCCTAGGCAACTT+AGG + Chr5:101082983-101083002 MsG0580029712.01.T01:intron 40.0%
! AGCCATTGCAAGTCTTATAC+AGG + Chr5:101080821-101080840 MsG0580029712.01.T01:CDS 40.0%
! ATTTGGTCTTCAAGTGGGAA+AGG + Chr5:101081247-101081266 MsG0580029712.01.T01:CDS 40.0%
! CAAAGTATTACCCTCTGTCA+TGG + Chr5:101085212-101085231 MsG0580029712.01.T01:CDS 40.0%
! CAGGTATAAGTTTGATGGGT+TGG + Chr5:101081969-101081988 MsG0580029712.01.T01:CDS 40.0%
! CTTGAAGGATACCGGTTATT+GGG + Chr5:101082009-101082028 MsG0580029712.01.T01:CDS 40.0%
! GACTTCATTATCTGGCTTGA+AGG + Chr5:101083102-101083121 MsG0580029712.01.T01:intron 40.0%
! GCAGGCTCTTTTATGACAAA+AGG - Chr5:101085099-101085118 None:intergenic 40.0%
! TCTCCCAAAGGTCATGTTTT+TGG + Chr5:101085005-101085024 MsG0580029712.01.T01:CDS 40.0%
! TGATTGCCTCCGTATTTTTC+CGG - Chr5:101084761-101084780 None:intergenic 40.0%
! TTCCTTTTCTGCAAGACACA+TGG - Chr5:101082332-101082351 None:intergenic 40.0%
! TTTTACTTCCCAAGGTGAAC+CGG - Chr5:101082278-101082297 None:intergenic 40.0%
!! AAAGAGTGTTGACGGGAAAT+TGG + Chr5:101084483-101084502 MsG0580029712.01.T01:CDS 40.0%
!! AAGAAAGCGTTGGAAAGACA+AGG + Chr5:101085606-101085625 MsG0580029712.01.T01:CDS 40.0%
!! AAGAGTGTTGACGGGAAATT+GGG + Chr5:101084484-101084503 MsG0580029712.01.T01:CDS 40.0%
!! ACGATTTCCGTTTTGTTGCT+TGG + Chr5:101081111-101081130 MsG0580029712.01.T01:CDS 40.0%
!! CATTCTTTAGGTGCTGGATT+TGG + Chr5:101081230-101081249 MsG0580029712.01.T01:CDS 40.0%
!! CGATTTCCGTTTTGTTGCTT+GGG + Chr5:101081112-101081131 MsG0580029712.01.T01:CDS 40.0%
!! TAATAGCTCTAGTGACCGAA+AGG - Chr5:101085173-101085192 None:intergenic 40.0%
AACGACGGACAAATGACTTC+AGG + Chr5:101081950-101081969 MsG0580029712.01.T01:CDS 45.0%
AAGAGAGAACATCGCCAATG+TGG + Chr5:101081598-101081617 MsG0580029712.01.T01:CDS 45.0%
AAGGAAGTTCAGTTGTTCCC+TGG - Chr5:101082155-101082174 None:intergenic 45.0%
AGTGGGAAAGGAATTGGCAA+AGG + Chr5:101081259-101081278 MsG0580029712.01.T01:CDS 45.0%
ATCTTTAGCCCATGCCTTAG+GGG + Chr5:101084702-101084721 MsG0580029712.01.T01:CDS 45.0%
CAAACCCTTCAAACCAACAC+CGG - Chr5:101082440-101082459 None:intergenic 45.0%
CAAGAATTGTGGCACAGAAG+AGG + Chr5:101082531-101082550 MsG0580029712.01.T01:CDS 45.0%
CAAGTGTACCATTGAAGAGC+TGG + Chr5:101082914-101082933 MsG0580029712.01.T01:CDS 45.0%
CATCGCCAATGTGGAGAATA+TGG + Chr5:101081607-101081626 MsG0580029712.01.T01:CDS 45.0%
CATCTTTAGCCCATGCCTTA+GGG + Chr5:101084701-101084720 MsG0580029712.01.T01:CDS 45.0%
CCATTTCCACACCCAATAAC+CGG - Chr5:101082023-101082042 None:intergenic 45.0%
CGAACTCTTATTGACCCCTA+AGG - Chr5:101084719-101084738 None:intergenic 45.0%
CGGTTATTGGGTGTGGAAAT+GGG + Chr5:101082021-101082040 MsG0580029712.01.T01:CDS 45.0%
CTCATGGCTTGAAACAATGG+TGG + Chr5:101081699-101081718 MsG0580029712.01.T01:CDS 45.0%
CTGAGTGCTAAAACAGCTCT+GGG - Chr5:101081047-101081066 None:intergenic 45.0%
CTTATTGACCCCTAAGGCAT+GGG - Chr5:101084713-101084732 None:intergenic 45.0%
CTTCAGCAAACTATCCGTGA+TGG + Chr5:101082217-101082236 MsG0580029712.01.T01:CDS 45.0%
GACCACATCTTGACATTCTG+TGG - Chr5:101084615-101084634 None:intergenic 45.0%
GCAGCCAAAAACATGACCTT+TGG - Chr5:101085012-101085031 None:intergenic 45.0%
GGAGTACAACAGACATGTTG+AGG - Chr5:101083498-101083517 None:intergenic 45.0%
GGTTACAATACTTCCGGTGT+TGG + Chr5:101082424-101082443 MsG0580029712.01.T01:CDS 45.0%
TAATCACGAGGAAGCTGATG+AGG + Chr5:101084369-101084388 MsG0580029712.01.T01:CDS 45.0%
TCCCACAGAATGTCAAGATG+TGG + Chr5:101084610-101084629 MsG0580029712.01.T01:CDS 45.0%
TCCTTCAAGCAGTGAATCTC+GGG + Chr5:101082390-101082409 MsG0580029712.01.T01:CDS 45.0%
TCGTGTCAACACGATACTCT+TGG - Chr5:101080626-101080645 None:intergenic 45.0%
TCTCAATAACCAGTGGGATG+TGG + Chr5:101084144-101084163 MsG0580029712.01.T01:CDS 45.0%
TCTCTCTTGTTCCATCGGTA+TGG - Chr5:101081586-101081605 None:intergenic 45.0%
TCTGAGTGCTAAAACAGCTC+TGG - Chr5:101081048-101081067 None:intergenic 45.0%
TCTTATTGACCCCTAAGGCA+TGG - Chr5:101084714-101084733 None:intergenic 45.0%
TGAGTGCTAAAACAGCTCTG+GGG - Chr5:101081046-101081065 None:intergenic 45.0%
TGATGTGGACGAGACTTATG+TGG + Chr5:101081427-101081446 MsG0580029712.01.T01:CDS 45.0%
TGCCATGTGTCTTGCAGAAA+AGG + Chr5:101082327-101082346 MsG0580029712.01.T01:CDS 45.0%
TGCTGAAGTTCTGCATCACT+TGG - Chr5:101082670-101082689 None:intergenic 45.0%
TGGGTTCCTCATCTGTATGT+TGG + Chr5:101082508-101082527 MsG0580029712.01.T01:CDS 45.0%
TGGTGGAAAAGACGACAAGA+TGG + Chr5:101083177-101083196 MsG0580029712.01.T01:CDS 45.0%
TGTTACGTCCCAAGGTGTAT+TGG - Chr5:101082743-101082762 None:intergenic 45.0%
TTCACTGCTTGAAGGAAGCA+TGG - Chr5:101082386-101082405 None:intergenic 45.0%
TTCAGTATTTCCAAGGCTCG+TGG - Chr5:101083031-101083050 None:intergenic 45.0%
! ACCCCAGTTATCTAGCTTGA+AGG + Chr5:101081994-101082013 MsG0580029712.01.T01:CDS 45.0%
! CAGCTCATGGTTTGGAACAA+TGG + Chr5:101082176-101082195 MsG0580029712.01.T01:CDS 45.0%
! CGCTTGATGGATGCTTGTTT+AGG + Chr5:101081497-101081516 MsG0580029712.01.T01:CDS 45.0%
! CTCATGGTTTGGAACAATGG+TGG + Chr5:101082179-101082198 MsG0580029712.01.T01:CDS 45.0%
! GCTGGATTTGGTCTTCAAGT+GGG + Chr5:101081242-101081261 MsG0580029712.01.T01:CDS 45.0%
! GCTTGAAGGATACCGGTTAT+TGG + Chr5:101082008-101082027 MsG0580029712.01.T01:CDS 45.0%
! GGGGCACCAATTGGTTTAAA+TGG - Chr5:101081026-101081045 None:intergenic 45.0%
! TGCTGGATTTGGTCTTCAAG+TGG + Chr5:101081241-101081260 MsG0580029712.01.T01:CDS 45.0%
! TGTTGCTTGGGAATGCTTGA+AGG + Chr5:101081124-101081143 MsG0580029712.01.T01:CDS 45.0%
!! ACCTCAAGTCAGCATTGATG+TGG + Chr5:101081412-101081431 MsG0580029712.01.T01:CDS 45.0%
!! ACTCTCTAGCTCCAGCTTTT+TGG + Chr5:101080892-101080911 MsG0580029712.01.T01:CDS 45.0%
!! ACTTCCGGTGTTGGTTTGAA+GGG + Chr5:101082433-101082452 MsG0580029712.01.T01:CDS 45.0%
!! ATCTGATGCAAAAGCACCAC+TGG + Chr5:101080711-101080730 MsG0580029712.01.T01:intron 45.0%
!! GTTTCACTTGCTATGAGCCT+TGG + Chr5:101081323-101081342 MsG0580029712.01.T01:CDS 45.0%
!! TACTTCCGGTGTTGGTTTGA+AGG + Chr5:101082432-101082451 MsG0580029712.01.T01:CDS 45.0%
!! TCCACATCAATGCTGACTTG+AGG - Chr5:101081416-101081435 None:intergenic 45.0%
!! TCTATACACCGGTTCACCTT+GGG + Chr5:101082267-101082286 MsG0580029712.01.T01:CDS 45.0%
!! TGCAAAAGCACCACTGGTTT+CGG + Chr5:101080717-101080736 MsG0580029712.01.T01:intron 45.0%
!! TGCATTGGAGGGCATTCTTT+AGG + Chr5:101081218-101081237 MsG0580029712.01.T01:CDS 45.0%
!!! AGAGCTGTTTTAGCACTCAG+AGG + Chr5:101081047-101081066 MsG0580029712.01.T01:CDS 45.0%
!!! CTTGAAGGATGCTGCTTTTG+GGG + Chr5:101083117-101083136 MsG0580029712.01.T01:CDS 45.0%
!!! GCTTGAAGGATGCTGCTTTT+GGG + Chr5:101083116-101083135 MsG0580029712.01.T01:CDS 45.0%
!!! TGCTTTTGGGGTGGGAAAAT+TGG + Chr5:101083129-101083148 MsG0580029712.01.T01:CDS 45.0%
ACCCGAGATTCACTGCTTGA+AGG - Chr5:101082394-101082413 None:intergenic 50.0%
AGCTTATCGGGTGTGCGAAT+GGG + Chr5:101082489-101082508 MsG0580029712.01.T01:CDS 50.0%
ATTCAGGAGAATTCGGAGGC+TGG - Chr5:101085371-101085390 None:intergenic 50.0%
CAATTGGACCACGGCATAAC+CGG - Chr5:101082968-101082987 None:intergenic 50.0%
CACAGAAGAGGAGGTTGACA+AGG + Chr5:101082543-101082562 MsG0580029712.01.T01:CDS 50.0%
CCGGTTATTGGGTGTGGAAA+TGG + Chr5:101082020-101082039 MsG0580029712.01.T01:CDS 50.0%
CCTAGGAACCAATTGGACCA+CGG - Chr5:101082977-101082996 None:intergenic 50.0%
CTCACAGCTTGCAACAATGG+TGG + Chr5:101082644-101082663 MsG0580029712.01.T01:CDS 50.0%
CTGAACTTCCTTGCAGCTCA+TGG + Chr5:101082163-101082182 MsG0580029712.01.T01:CDS 50.0%
CTGCTCACAGCTTGCAACAA+TGG + Chr5:101082641-101082660 MsG0580029712.01.T01:CDS 50.0%
CTGTATGCTGACAAGAGTGG+TGG + Chr5:101083160-101083179 MsG0580029712.01.T01:CDS 50.0%
CTTCCTTGCAGCTCATGGTT+TGG + Chr5:101082168-101082187 MsG0580029712.01.T01:CDS 50.0%
GAACACTGGTACACCTTCTC+AGG + Chr5:101081796-101081815 MsG0580029712.01.T01:CDS 50.0%
GAATCTCGGGTGCTCAATGA+TGG + Chr5:101082403-101082422 MsG0580029712.01.T01:CDS 50.0%
GAATTGTGGCACAGAAGAGG+AGG + Chr5:101082534-101082553 MsG0580029712.01.T01:CDS 50.0%
GCATCTTTAGCCCATGCCTT+AGG + Chr5:101084700-101084719 MsG0580029712.01.T01:CDS 50.0%
GCTCTAGTGACCGAAAGGAT+TGG - Chr5:101085168-101085187 None:intergenic 50.0%
GGAGGTTGACAAGGAGAATG+TGG + Chr5:101082552-101082571 MsG0580029712.01.T01:CDS 50.0%
GTAAATGCCACCGAAACCAG+TGG - Chr5:101080730-101080749 None:intergenic 50.0%
GTTCCAAACCATGAGCTGCA+AGG - Chr5:101082174-101082193 None:intergenic 50.0%
TACCCTCTGTCATGGACGTA+TGG + Chr5:101085220-101085239 MsG0580029712.01.T01:CDS 50.0%
TAGCTTATCGGGTGTGCGAA+TGG + Chr5:101082488-101082507 MsG0580029712.01.T01:CDS 50.0%
TCCATCAAGCGCGATAAACG+AGG - Chr5:101081488-101081507 None:intergenic 50.0%
TGCAGTCCGGAAAAATACGG+AGG + Chr5:101084752-101084771 MsG0580029712.01.T01:CDS 50.0%
TTGCTTACGCAATGACGCGT+CGG - Chr5:101084979-101084998 None:intergenic 50.0%
! AGGATACCGGTTATTGGGTG+TGG + Chr5:101082014-101082033 MsG0580029712.01.T01:CDS 50.0%
! GAGTGCTAAAACAGCTCTGG+GGG - Chr5:101081045-101081064 None:intergenic 50.0%
! TTTCTAGTGCCACATCCCAC+TGG - Chr5:101084156-101084175 None:intergenic 50.0%
!! AAAAGCACCACTGGTTTCGG+TGG + Chr5:101080720-101080739 MsG0580029712.01.T01:intron 50.0%
!! CTCTATACACCGGTTCACCT+TGG + Chr5:101082266-101082285 MsG0580029712.01.T01:CDS 50.0%
!!! AAGGATGCTGCTTTTGGGGT+GGG + Chr5:101083121-101083140 MsG0580029712.01.T01:CDS 50.0%
!!! GGCTTGAAGGATGCTGCTTT+TGG + Chr5:101083115-101083134 MsG0580029712.01.T01:CDS 50.0%
ATCGAATCTCGGGCGAGCTA+CGG - Chr5:101085034-101085053 None:intergenic 55.0%
CGGTTATGCCGTGGTCCAAT+TGG + Chr5:101082966-101082985 MsG0580029712.01.T01:CDS 55.0%
GCCTCGTTTATCGCGCTTGA+TGG + Chr5:101081484-101081503 MsG0580029712.01.T01:CDS 55.0%
GGACATGCCACTACCACAAG+TGG + Chr5:101084390-101084409 MsG0580029712.01.T01:CDS 55.0%
GGCCATACGTCCATGACAGA+GGG - Chr5:101085225-101085244 None:intergenic 55.0%
GGGTAGAACTGCAACACGAG+AGG + Chr5:101084504-101084523 MsG0580029712.01.T01:CDS 55.0%
GTATTTCCAAGGCTCGTGGC+TGG - Chr5:101083027-101083046 None:intergenic 55.0%
TCGGAGGCTGGCACATCAAA+CGG - Chr5:101085359-101085378 None:intergenic 55.0%
TGTTGGCGCTGTCGTGAAGA+TGG + Chr5:101082069-101082088 MsG0580029712.01.T01:CDS 55.0%
! CCGTGGTCCAATTGGTTCCT+AGG + Chr5:101082974-101082993 MsG0580029712.01.T01:intron 55.0%
!! GAAGGCACCCAGCTCTTCAA+TGG - Chr5:101082925-101082944 None:intergenic 55.0%
!! GGAGGGCATTCTTTAGGTGC+TGG + Chr5:101081224-101081243 MsG0580029712.01.T01:CDS 55.0%
!!! GAAGGATGCTGCTTTTGGGG+TGG + Chr5:101083120-101083139 MsG0580029712.01.T01:CDS 55.0%
AGCTGGGTGCCTTCACTGTC+AGG + Chr5:101082931-101082950 MsG0580029712.01.T01:CDS 60.0%
CGGCATAACCGGTATCCCTG+AGG - Chr5:101082957-101082976 None:intergenic 60.0%
CGGCCATACGTCCATGACAG+AGG - Chr5:101085226-101085245 None:intergenic 60.0%
CTGTCAGGCCTCAGGGATAC+CGG + Chr5:101082946-101082965 MsG0580029712.01.T01:CDS 60.0%
GCCTTCACTGTCAGGCCTCA+GGG + Chr5:101082939-101082958 MsG0580029712.01.T01:CDS 60.0%
GCTCGTGGCTGGAGCAACAA+AGG - Chr5:101083016-101083035 None:intergenic 60.0%
TCCCTGAGGCCTGACAGTGA+AGG - Chr5:101082943-101082962 None:intergenic 60.0%
TGCCTTCACTGTCAGGCCTC+AGG + Chr5:101082938-101082957 MsG0580029712.01.T01:CDS 60.0%
! CAGGGATACCGGTTATGCCG+TGG + Chr5:101082957-101082976 MsG0580029712.01.T01:CDS 60.0%
!! ACAGCTCTGGGGGCACCAAT+TGG - Chr5:101081035-101081054 None:intergenic 60.0%
GTTGCTCCAGCCACGAGCCT+TGG + Chr5:101083018-101083037 MsG0580029712.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 101080552 101085829 101080552 ID=MsG0580029712.01;Name=MsG0580029712.01
Chr5 mRNA 101080552 101085829 101080552 ID=MsG0580029712.01.T01;Parent=MsG0580029712.01;Name=MsG0580029712.01.T01;_AED=0.17;_eAED=0.18;_QI=0|0.25|0.2|1|0.75|0.8|5|134|1337
Chr5 exon 101080552 101080607 101080552 ID=MsG0580029712.01.T01:exon:36709;Parent=MsG0580029712.01.T01
Chr5 exon 101080797 101082987 101080797 ID=MsG0580029712.01.T01:exon:36710;Parent=MsG0580029712.01.T01
Chr5 exon 101083103 101083217 101083103 ID=MsG0580029712.01.T01:exon:36711;Parent=MsG0580029712.01.T01
Chr5 exon 101083876 101084187 101083876 ID=MsG0580029712.01.T01:exon:36712;Parent=MsG0580029712.01.T01
Chr5 exon 101084356 101085829 101084356 ID=MsG0580029712.01.T01:exon:36713;Parent=MsG0580029712.01.T01
Chr5 CDS 101080552 101080607 101080552 ID=MsG0580029712.01.T01:cds;Parent=MsG0580029712.01.T01
Chr5 CDS 101080797 101082987 101080797 ID=MsG0580029712.01.T01:cds;Parent=MsG0580029712.01.T01
Chr5 CDS 101083103 101083217 101083103 ID=MsG0580029712.01.T01:cds;Parent=MsG0580029712.01.T01
Chr5 CDS 101083876 101084187 101083876 ID=MsG0580029712.01.T01:cds;Parent=MsG0580029712.01.T01
Chr5 CDS 101084356 101085695 101084356 ID=MsG0580029712.01.T01:cds;Parent=MsG0580029712.01.T01
Chr5 three_prime_UTR 101085696 101085829 101085696 ID=MsG0580029712.01.T01:three_prime_utr;Parent=MsG0580029712.01.T01
Gene Sequence

>MsG0580029712.01.T01

ATGCTGTCAATCAGAGACTGTTTTTATAATGTCAGTTATATTCATGGTTTTTTATTGAAGGACGCAAATTATAAAAGAAGAGCCATTGCAAGTCTTATACAGGCAGTGTACTTTCTTGAACTTGATAGGCAGGAGAACAGAACAAAAGAAAACTCTCTAGCTCCAGCTTTTTGGATTCCCTTCAAGTATAAGCCCACACAAATATTGATTGATGAAAGAGATGGGTCAATTTTCGGTGCAATATTTGAATGGGATCGGTCTGCAGCATTGTCTGAATTCAAACCATTTAAACCAATTGGTGCCCCCAGAGCTGTTTTAGCACTCAGAGGAACATTGATCAGATTCCCTACAATGCGAAGAGATTTTGAAGACGATTTCCGTTTTGTTGCTTGGGAATGCTTGAAGGACTCTGTGAGATTTAAAGTAGCTATGGATGCAGTGAAATCAGTGTATGATACGTATGGAAGCAGAAATGTATGCATTGGAGGGCATTCTTTAGGTGCTGGATTTGGTCTTCAAGTGGGAAAGGAATTGGCAAAGGAAATGATTAATGTGGAAGCACATTTATTTAATCCACCTTCTGTTTCACTTGCTATGAGCCTTGGAAATATTGGAGAAAAGGCTGAATATGTTTGGAATAGAATTAAAATTTTGCTTCCTTCAAGTAGTGAACCTCAAGTCAGCATTGATGTGGACGAGACTTATGTGGATGAGACTTACATTGTACGATTGAAGAGAATGATGCCTCGTTTATCGCGCTTGATGGATGCTTGTTTAGGAAGAGAAAAATGGGTTCCTCATCTTTATGTTAACAAGAATGATTGGATCAGTTACTTTTATATCCATACCGATGGAACAAGAGAGAACATCGCCAATGTGGAGAATATGGATCCTTCTAATGAGCACAATGAAGCCAAGTTGTATGTTATCACAAAGAAAGACCAGAAATTTCTCGAAGCTCATGGCTTGAAACAATGGTGGTCAAGTGACGGTAACATAGAGCTTAAGCATGATATCCGCAATAGCAAATTTGTGAGCATGCAACTTAAATCTTTGAACACTGGTACACCTTCTCAGGTAGTACTTTTCTATTATCCATATTATGTTTCATTAGCCACTCGTCACATAAATATTAGAGAAGTGACATATTATGTTTGGAATATACTTAAATGTGTGCCTCATCATATAAGTGGTAAATCTCAAATCATCAACGACGGACAAATGACTTCAGGTATAAGTTTGATGGGTTGGATACCCCAGTTATCTAGCTTGAAGGATACCGGTTATTGGGTGTGGAAATGGGTTCCTCTTCTGTATGCTAATGAGAATGTTGGCGCTGTCGTGAAGATGGTTAGAAAGGAGAATATGGATCATGAAGACGGTCAAATTACTGCAAATTTGTTTACTGTCTCCAGGGAACAACTGAACTTCCTTGCAGCTCATGGTTTGGAACAATGGTGGCCAAATGATTTAGAACTTCAGCAAACTATCCGTGATGGAAAACTCATAAGAAGGCAAATTAAATCTCTATACACCGGTTCACCTTGGGAAGTAAAAAAAGGATCAAATGGTTCTTTTCTTTCACTTGCCATGTGTCTTGCAGAAAAGGAAGAATTTATATGGAAATTGAATAGTCTTAAATCCATGCTTCCTTCAAGCAGTGAATCTCGGGTGCTCAATGATGGTTACAATACTTCCGGTGTTGGTTTGAAGGGTTTGATACCTCAGTTATCTGGCTTGAAGAATGTAGCTTATCGGGTGTGCGAATGGGTTCCTCATCTGTATGTTGGCAAGAATTGTGGCACAGAAGAGGAGGTTGACAAGGAGAATGTGGATCCTGCAAATGAGAAAATTACTGCAAAGTTGCACGTAGTCTCCAAAGAACAGCAGAGATTTCTTTCTGCTCACAGCTTGCAACAATGGTGGCCAAGTGATGCAGAACTTCAGCAACCTATTCATGATAGCAAACTCATAAGCAGGCGAATTGGATCTTTATACACCAATACACCTTGGGACGTAACAAAAAGATTAAATCCTTTTATTTCACTTCCCGTTTGTCTCGATAGTATCAGACAAAAAGAAGAATTTTTATGGAAATGGAATGCTGTTAAATCTATACTTCTTTCAAGTAGTGAAACTCAGGTGAATAACGACAATGACGATAACAAGACATCAAGTGTACCATTGAAGAGCTGGGTGCCTTCACTGTCAGGCCTCAGGGATACCGGTTATGCCGTGGTCCAATTGACTTCATTATCTGGCTTGAAGGATGCTGCTTTTGGGGTGGGAAAATTGGTGCCATATCTGTATGCTGACAAGAGTGGTGGAAAAGACGACAAGATGGTTGACAAAGAGAACAAGGAATCTCATATTTCAAATCCCTTAAAATTGCTTATAAAAGTTGAACTTCATGATGATATTTCAGTTATGGATACAAATAATGACATAAACGTTCCCTTAGTTGCAATAGATTTGAATTTTCCTTTTTTCAATTATGAGGCAAATTCACCAAATTCACTAGACTTGAACAATGAACCACCTCTTACTAATGATGATGATGTTCTTCTATTTCAATCTAGTGATCCACCTCAAGAAGAATATACACAGTCGGATGAAGAATATGAAGACTTTCTCAATAACCAGTGGGATGTGGCACTAGAAAACTCAGATGATGGTGATGCTAATGATAATCACGAGGAAGCTGATGAGGACATGCCACTACCACAAGTGGTTACTATCAATAAGAGAGGAAAGAACATGTCCAATGACAAAAGAAGAGACATATATGAGATGTTATTGAAAAAGAGTGTTGACGGGAAATTGGGTAGAACTGCAACACGAGAGGTGTCATCACATTTTACGGTTCCTATATTAGCTGTTCAACGTATTTGGAAACGAGCAAAAGATTGTGGTGCTCATGTTGATGTATCCCACAGAATGTCAAGATGTGGTCGAAAGAGAGCAGAAATTGATTTGGAAAAAATTCGTGATGTGCCTTTGCATAAAAGGACAACAATTGCATCTTTAGCCCATGCCTTAGGGGTCAATAAGAGTTCGTTATTTCGGCTTATGCAGTCCGGAAAAATACGGAGGCAATCAAATGCTATAAAGCCTTTCTTGAAGGAAGAAAACAAAAGAACAAGATTACAATTTTGCATATCAATGCTTGACGCCAATAGCATACCCAATAATCCAACTTTTGTGGGAATGTATAACATCATTCACATTGATGAGAAGTGGTTCTCTATGACAAAAAAAAATGAGAAATATTACTTGTTGCAAGATGAAGATGATCCGACGCGTCATTGCGTAAGCAAAAACTTTCTCCCAAAGGTCATGTTTTTGGCTGCCGTAGCTCGCCCGAGATTCGATTCACATAGAAATGTAACATTCGATGGCAAAATTGGCGTCTTTCCTTTTGTCATAAAAGAGCCTGCTAAAAGGACTAGTGTTAATAGAGTGGCTGGTACAATGGAGACTAAACCAATCCTTTCGGTCACTAGAGCTATTATAAGATCATTTTATATCGACAAAGTATTACCCTCTGTCATGGACGTATGGCCGATAGAAGATATCGGAATTCCGATATTTATTCAACAAGATAACGCGAGAACGCATATTGATATAAATGATGAAGAATTTTGTCAAGCTGTTAAGGAAAGTGGATTTGATATCCGTTTGATGTGCCAGCCTCCGAATTCTCCTGAATTAAATGTTCTTGATCTAGGATTTTTTCGTGCTATTCAGTCATTACAACAACAAAAGGTATCTCAAACTATTGATGAACTTGTTACTGTTGTGGAGAAGTCATTTGAAGAATTTTCACCAATTAAGTCAAATCATATATTCTTGACTTTACAAACGTGCATGGAAGAGATCATGAAAGCAAAAGGATCAAACAAGTTTAGAATTCCACACATGAAAAAGAAAGCGTTGGAAAGACAAGGACAACTACCAACAAATGTCAGTTGTGATTCTAATTTGGTGCAAGAGGTTATCAATTTCTTAAACTAG

Protein sequence

>MsG0580029712.01.T01

MLSIRDCFYNVSYIHGFLLKDANYKRRAIASLIQAVYFLELDRQENRTKENSLAPAFWIPFKYKPTQILIDERDGSIFGAIFEWDRSAALSEFKPFKPIGAPRAVLALRGTLIRFPTMRRDFEDDFRFVAWECLKDSVRFKVAMDAVKSVYDTYGSRNVCIGGHSLGAGFGLQVGKELAKEMINVEAHLFNPPSVSLAMSLGNIGEKAEYVWNRIKILLPSSSEPQVSIDVDETYVDETYIVRLKRMMPRLSRLMDACLGREKWVPHLYVNKNDWISYFYIHTDGTRENIANVENMDPSNEHNEAKLYVITKKDQKFLEAHGLKQWWSSDGNIELKHDIRNSKFVSMQLKSLNTGTPSQVVLFYYPYYVSLATRHINIREVTYYVWNILKCVPHHISGKSQIINDGQMTSGISLMGWIPQLSSLKDTGYWVWKWVPLLYANENVGAVVKMVRKENMDHEDGQITANLFTVSREQLNFLAAHGLEQWWPNDLELQQTIRDGKLIRRQIKSLYTGSPWEVKKGSNGSFLSLAMCLAEKEEFIWKLNSLKSMLPSSSESRVLNDGYNTSGVGLKGLIPQLSGLKNVAYRVCEWVPHLYVGKNCGTEEEVDKENVDPANEKITAKLHVVSKEQQRFLSAHSLQQWWPSDAELQQPIHDSKLISRRIGSLYTNTPWDVTKRLNPFISLPVCLDSIRQKEEFLWKWNAVKSILLSSSETQVNNDNDDNKTSSVPLKSWVPSLSGLRDTGYAVVQLTSLSGLKDAAFGVGKLVPYLYADKSGGKDDKMVDKENKESHISNPLKLLIKVELHDDISVMDTNNDINVPLVAIDLNFPFFNYEANSPNSLDLNNEPPLTNDDDVLLFQSSDPPQEEYTQSDEEYEDFLNNQWDVALENSDDGDANDNHEEADEDMPLPQVVTINKRGKNMSNDKRRDIYEMLLKKSVDGKLGRTATREVSSHFTVPILAVQRIWKRAKDCGAHVDVSHRMSRCGRKRAEIDLEKIRDVPLHKRTTIASLAHALGVNKSSLFRLMQSGKIRRQSNAIKPFLKEENKRTRLQFCISMLDANSIPNNPTFVGMYNIIHIDEKWFSMTKKNEKYYLLQDEDDPTRHCVSKNFLPKVMFLAAVARPRFDSHRNVTFDGKIGVFPFVIKEPAKRTSVNRVAGTMETKPILSVTRAIIRSFYIDKVLPSVMDVWPIEDIGIPIFIQQDNARTHIDINDEEFCQAVKESGFDIRLMCQPPNSPELNVLDLGFFRAIQSLQQQKVSQTIDELVTVVEKSFEEFSPIKSNHIFLTLQTCMEEIMKAKGSNKFRIPHMKKKALERQGQLPTNVSCDSNLVQEVINFLN*