Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030763.01.T01 | XP_003618487.1 | 95.625 | 320 | 14 | 0 | 1 | 320 | 1 | 320 | 0 | 585 |
| MsG0680030763.01.T02 | XP_003618487.1 | 95.625 | 320 | 14 | 0 | 1 | 320 | 1 | 320 | 0 | 585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030763.01.T01 | Q84V25 | 73.354 | 319 | 85 | 0 | 2 | 320 | 4 | 322 | 3.62E-161 | 455 |
| MsG0680030763.01.T02 | Q84V25 | 73.354 | 319 | 85 | 0 | 2 | 320 | 4 | 322 | 3.62E-161 | 455 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030763.01.T01 | G7KKH6 | 95.625 | 320 | 14 | 0 | 1 | 320 | 1 | 320 | 0.0 | 585 |
| MsG0680030763.01.T02 | G7KKH6 | 95.625 | 320 | 14 | 0 | 1 | 320 | 1 | 320 | 0.0 | 585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048700.01 | MsG0680030763.01 | 0.822601 | 2.170607e-53 | 1.825468e-50 |
| MsG0080048701.01 | MsG0680030763.01 | 0.801547 | 8.550693e-49 | 4.094729e-46 |
| MsG0080049140.01 | MsG0680030763.01 | 0.826800 | 2.224097e-54 | 2.107423e-51 |
| MsG0180000353.01 | MsG0680030763.01 | 0.811235 | 7.749911e-51 | 4.771555e-48 |
| MsG0180000360.01 | MsG0680030763.01 | 0.806616 | 7.545245e-50 | 4.113873e-47 |
| MsG0180000373.01 | MsG0680030763.01 | 0.828382 | 9.274928e-55 | 9.204220e-52 |
| MsG0180002421.01 | MsG0680030763.01 | 0.808220 | 3.446958e-50 | 1.959683e-47 |
| MsG0180003427.01 | MsG0680030763.01 | 0.850179 | 2.006857e-60 | 3.897903e-57 |
| MsG0180003796.01 | MsG0680030763.01 | 0.803411 | 3.531565e-49 | 1.773438e-46 |
| MsG0180003858.01 | MsG0680030763.01 | 0.801985 | 6.954921e-49 | 3.367595e-46 |
| MsG0180004099.01 | MsG0680030763.01 | 0.828513 | 8.624380e-55 | 8.591112e-52 |
| MsG0180004806.01 | MsG0680030763.01 | 0.804985 | 1.660427e-49 | 8.683015e-47 |
| MsG0180005835.01 | MsG0680030763.01 | 0.805693 | 1.180077e-49 | 6.284639e-47 |
| MsG0180006000.01 | MsG0680030763.01 | 0.813736 | 2.200394e-51 | 1.448659e-48 |
| MsG0280006311.01 | MsG0680030763.01 | 0.840372 | 9.046417e-58 | 1.286004e-54 |
| MsG0280006420.01 | MsG0680030763.01 | 0.807625 | 4.613977e-50 | 2.582384e-47 |
| MsG0280010779.01 | MsG0680030763.01 | 0.856664 | 2.760138e-62 | 6.636526e-59 |
| MsG0280010795.01 | MsG0680030763.01 | 0.806354 | 8.567244e-50 | 4.640040e-47 |
| MsG0280010868.01 | MsG0680030763.01 | 0.810124 | 1.347074e-50 | 8.053351e-48 |
| MsG0280010957.01 | MsG0680030763.01 | 0.802682 | 4.995744e-49 | 2.462432e-46 |
| MsG0280011154.01 | MsG0680030763.01 | 0.803406 | 3.540343e-49 | 1.777629e-46 |
| MsG0280011282.01 | MsG0680030763.01 | 0.865493 | 5.675905e-65 | 1.850194e-61 |
| MsG0280011399.01 | MsG0680030763.01 | 0.822496 | 2.296636e-53 | 1.925466e-50 |
| MsG0380012146.01 | MsG0680030763.01 | 0.804371 | 2.230699e-49 | 1.148184e-46 |
| MsG0380013636.01 | MsG0680030763.01 | 0.820730 | 5.877964e-53 | 4.688591e-50 |
| MsG0380014132.01 | MsG0680030763.01 | 0.802400 | 5.711704e-49 | 2.795290e-46 |
| MsG0380014754.01 | MsG0680030763.01 | 0.808846 | 2.533454e-50 | 1.464099e-47 |
| MsG0680030763.01 | MsG0680031384.01 | 0.819217 | 1.304003e-52 | 9.973068e-50 |
| MsG0680030763.01 | MsG0680031386.01 | 0.808150 | 3.567626e-50 | 2.024564e-47 |
| MsG0680030763.01 | MsG0680034598.01 | 0.819542 | 1.099450e-52 | 8.485383e-50 |
| MsG0680030763.01 | MsG0780036752.01 | 0.814772 | 1.299759e-51 | 8.799602e-49 |
| MsG0680030763.01 | MsG0780040896.01 | 0.845765 | 3.311801e-59 | 5.578372e-56 |
| MsG0680030763.01 | MsG0780041063.01 | 0.832628 | 8.481761e-56 | 9.534047e-53 |
| MsG0680030763.01 | MsG0780041579.01 | 0.807520 | 4.855872e-50 | 2.710468e-47 |
| MsG0680030763.01 | MsG0780041739.01 | 0.803093 | 4.108879e-49 | 2.046488e-46 |
| MsG0680030763.01 | MsG0880042845.01 | 0.805089 | 1.579388e-49 | 8.281287e-47 |
| MsG0680030763.01 | MsG0880042929.01 | 0.802353 | 5.841139e-49 | 2.855190e-46 |
| MsG0680030763.01 | MsG0880043299.01 | 0.805174 | 1.516450e-49 | 7.968671e-47 |
| MsG0680030763.01 | MsG0880043516.01 | 0.840963 | 6.333360e-58 | 9.169439e-55 |
| MsG0680030763.01 | MsG0880043951.01 | 0.801106 | 1.052861e-48 | 4.986436e-46 |
| MsG0680030763.01 | MsG0880046165.01 | 0.801241 | 9.882477e-49 | 4.696214e-46 |
| MsG0680030763.01 | MsG0880047226.01 | 0.835938 | 1.253596e-56 | 1.556094e-53 |
| MsG0680030763.01 | MsG0880047431.01 | 0.811412 | 7.093077e-51 | 4.387736e-48 |
| MsG0480018918.01 | MsG0680030763.01 | 0.807469 | 4.978008e-50 | 2.775045e-47 |
| MsG0480018919.01 | MsG0680030763.01 | 0.808665 | 2.769625e-50 | 1.592973e-47 |
| MsG0480019635.01 | MsG0680030763.01 | 0.842820 | 2.047579e-58 | 3.141667e-55 |
| MsG0480019699.01 | MsG0680030763.01 | 0.805824 | 1.107962e-49 | 5.920196e-47 |
| MsG0480020495.01 | MsG0680030763.01 | 0.817552 | 3.107485e-52 | 2.270118e-49 |
| MsG0480021013.01 | MsG0680030763.01 | 0.801972 | 6.995238e-49 | 3.386012e-46 |
| MsG0480021156.01 | MsG0680030763.01 | 0.823486 | 1.349899e-53 | 1.163876e-50 |
| MsG0480022325.01 | MsG0680030763.01 | 0.809620 | 1.729556e-50 | 1.020475e-47 |
| MsG0480022331.01 | MsG0680030763.01 | 0.870277 | 1.647730e-66 | 6.372836e-63 |
| MsG0480022738.01 | MsG0680030763.01 | 0.806899 | 6.572786e-50 | 3.610035e-47 |
| MsG0480022998.01 | MsG0680030763.01 | 0.801214 | 1.000655e-48 | 4.751910e-46 |
| MsG0480023196.01 | MsG0680030763.01 | 0.810313 | 1.226808e-50 | 7.370447e-48 |
| MsG0480023262.01 | MsG0680030763.01 | 0.812182 | 4.821265e-51 | 3.044389e-48 |
| MsG0480023421.01 | MsG0680030763.01 | 0.815279 | 1.002871e-51 | 6.884272e-49 |
| MsG0480023541.01 | MsG0680030763.01 | 0.835009 | 2.153713e-56 | 2.599934e-53 |
| MsG0480023620.01 | MsG0680030763.01 | 0.804612 | 1.986533e-49 | 1.028871e-46 |
| MsG0580024035.01 | MsG0680030763.01 | 0.824732 | 6.881728e-54 | 6.147975e-51 |
| MsG0580024489.01 | MsG0680030763.01 | 0.833568 | 4.948512e-56 | 5.720967e-53 |
| MsG0580024758.01 | MsG0680030763.01 | 0.805359 | 1.386535e-49 | 7.320848e-47 |
| MsG0580025766.01 | MsG0680030763.01 | 0.814020 | 1.905092e-51 | 1.263921e-48 |
| MsG0380015548.01 | MsG0680030763.01 | 0.855252 | 7.145461e-62 | 1.639458e-58 |
| MsG0380016140.01 | MsG0680030763.01 | 0.815000 | 1.156785e-51 | 7.880664e-49 |
| MsG0380016703.01 | MsG0680030763.01 | 0.843175 | 1.647222e-58 | 2.555626e-55 |
| MsG0380016994.01 | MsG0680030763.01 | 0.828379 | 9.291159e-55 | 9.219372e-52 |
| MsG0380017239.01 | MsG0680030763.01 | 0.829755 | 4.309488e-55 | 4.452187e-52 |
| MsG0380017819.01 | MsG0680030763.01 | 0.816118 | 6.519756e-52 | 4.579707e-49 |
| MsG0480018397.01 | MsG0680030763.01 | 0.842251 | 2.897534e-58 | 4.367534e-55 |
| MsG0580026186.01 | MsG0680030763.01 | 0.828044 | 1.118498e-54 | 1.099125e-51 |
| MsG0580026593.01 | MsG0680030763.01 | 0.808168 | 3.535692e-50 | 2.007435e-47 |
| MsG0580027208.01 | MsG0680030763.01 | 0.802982 | 4.333051e-49 | 2.152037e-46 |
| MsG0580028328.01 | MsG0680030763.01 | 0.804262 | 2.349949e-49 | 1.206144e-46 |
| MsG0580028756.01 | MsG0680030763.01 | 0.824782 | 6.698825e-54 | 5.993009e-51 |
| MsG0580029278.01 | MsG0680030763.01 | 0.806079 | 9.792482e-50 | 5.266609e-47 |
| MsG0580029298.01 | MsG0680030763.01 | 0.845481 | 3.954460e-59 | 6.599220e-56 |
| MsG0580029712.01 | MsG0680030763.01 | 0.826498 | 2.624543e-54 | 2.465457e-51 |
| MsG0280006540.01 | MsG0680030763.01 | 0.809686 | 1.674019e-50 | 9.893833e-48 |
| MsG0280006591.01 | MsG0680030763.01 | 0.811177 | 7.975362e-51 | 4.902961e-48 |
| MsG0280006922.01 | MsG0680030763.01 | 0.801879 | 7.309708e-49 | 3.530231e-46 |
| MsG0280007140.01 | MsG0680030763.01 | 0.818625 | 1.777784e-52 | 1.337561e-49 |
| MsG0280008280.01 | MsG0680030763.01 | 0.846285 | 2.391124e-59 | 4.094939e-56 |
| MsG0280009118.01 | MsG0680030763.01 | 0.841122 | 5.752788e-58 | 8.369490e-55 |
| MsG0280009156.01 | MsG0680030763.01 | 0.825269 | 5.138819e-54 | 4.661644e-51 |
| MsG0280009493.01 | MsG0680030763.01 | 0.801969 | 7.006453e-49 | 3.391158e-46 |
| MsG0280009514.01 | MsG0680030763.01 | 0.841557 | 4.419648e-58 | 6.518628e-55 |
| MsG0280009752.01 | MsG0680030763.01 | 0.830219 | 3.321366e-55 | 3.477438e-52 |
| MsG0280010301.01 | MsG0680030763.01 | 0.803569 | 3.273968e-49 | 1.650936e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030763.01.T01 | MTR_6g012170 | 95.625 | 320 | 14 | 0 | 1 | 320 | 1 | 320 | 0.0 | 585 |
| MsG0680030763.01.T01 | MTR_6g012160 | 92.857 | 294 | 21 | 0 | 1 | 294 | 1 | 294 | 0.0 | 522 |
| MsG0680030763.01.T01 | MTR_8g064610 | 68.471 | 314 | 98 | 1 | 7 | 320 | 72 | 384 | 3.97e-154 | 437 |
| MsG0680030763.01.T01 | MTR_7g034395 | 72.492 | 309 | 85 | 0 | 12 | 320 | 9 | 317 | 1.31e-146 | 415 |
| MsG0680030763.01.T01 | MTR_8g035630 | 46.624 | 311 | 160 | 5 | 12 | 320 | 5 | 311 | 8.39e-88 | 267 |
| MsG0680030763.01.T01 | MTR_8g035880 | 47.231 | 307 | 156 | 5 | 12 | 316 | 5 | 307 | 3.31e-87 | 265 |
| MsG0680030763.01.T01 | MTR_6g012140 | 87.234 | 141 | 18 | 0 | 179 | 319 | 3 | 143 | 2.57e-84 | 251 |
| MsG0680030763.01.T01 | MTR_1319s0010 | 71.963 | 107 | 30 | 0 | 73 | 179 | 3 | 109 | 1.13e-41 | 140 |
| MsG0680030763.01.T01 | MTR_7g055743 | 34.132 | 334 | 169 | 11 | 13 | 317 | 57 | 368 | 4.31e-38 | 139 |
| MsG0680030763.01.T01 | MTR_4g036310 | 35.866 | 329 | 173 | 12 | 16 | 317 | 11 | 328 | 2.18e-37 | 136 |
| MsG0680030763.01.T01 | MTR_4g032995 | 32.803 | 314 | 174 | 7 | 32 | 318 | 26 | 329 | 6.11e-35 | 130 |
| MsG0680030763.01.T01 | MTR_4g033205 | 32.803 | 314 | 174 | 7 | 32 | 318 | 26 | 329 | 7.00e-35 | 129 |
| MsG0680030763.01.T01 | MTR_6g012100 | 88.710 | 62 | 7 | 0 | 259 | 320 | 8 | 69 | 2.02e-32 | 115 |
| MsG0680030763.01.T01 | MTR_2g078520 | 31.098 | 328 | 180 | 10 | 26 | 316 | 40 | 358 | 7.01e-30 | 117 |
| MsG0680030763.01.T01 | MTR_4g036260 | 33.091 | 275 | 148 | 7 | 70 | 318 | 44 | 308 | 5.19e-29 | 113 |
| MsG0680030763.01.T01 | MTR_4g050760 | 27.879 | 330 | 182 | 13 | 24 | 316 | 13 | 323 | 1.09e-25 | 105 |
| MsG0680030763.01.T01 | MTR_2g012380 | 27.879 | 330 | 182 | 13 | 24 | 316 | 13 | 323 | 1.09e-25 | 105 |
| MsG0680030763.01.T01 | MTR_2g012420 | 29.755 | 326 | 181 | 13 | 24 | 316 | 13 | 323 | 1.19e-25 | 104 |
| MsG0680030763.01.T01 | MTR_2g012380 | 29.752 | 242 | 139 | 9 | 24 | 251 | 13 | 237 | 2.75e-22 | 94.7 |
| MsG0680030763.01.T01 | MTR_4g086400 | 25.868 | 317 | 182 | 9 | 40 | 316 | 177 | 480 | 7.68e-20 | 90.1 |
| MsG0680030763.01.T01 | MTR_4g086400 | 25.868 | 317 | 182 | 9 | 40 | 316 | 317 | 620 | 9.07e-20 | 90.1 |
| MsG0680030763.01.T01 | MTR_4g086410 | 25.714 | 315 | 181 | 9 | 42 | 316 | 319 | 620 | 1.16e-19 | 90.1 |
| MsG0680030763.01.T01 | MTR_4g036170 | 29.310 | 290 | 163 | 7 | 54 | 317 | 30 | 303 | 2.28e-19 | 87.0 |
| MsG0680030763.01.T01 | MTR_6g039950 | 57.576 | 66 | 28 | 0 | 6 | 71 | 14 | 79 | 2.49e-18 | 78.6 |
| MsG0680030763.01.T01 | MTR_3g093620 | 28.213 | 319 | 179 | 11 | 35 | 316 | 30 | 335 | 2.40e-14 | 73.2 |
| MsG0680030763.01.T01 | MTR_2g012420 | 28.390 | 236 | 131 | 10 | 114 | 316 | 22 | 252 | 2.71e-14 | 72.0 |
| MsG0680030763.01.T01 | MTR_4g050710 | 28.390 | 236 | 131 | 10 | 114 | 316 | 16 | 246 | 2.79e-14 | 71.6 |
| MsG0680030763.01.T01 | MTR_2g012420 | 28.125 | 192 | 102 | 8 | 157 | 316 | 4 | 191 | 1.82e-12 | 65.5 |
| MsG0680030763.01.T01 | MTR_8g095220 | 24.084 | 382 | 211 | 14 | 6 | 316 | 49 | 422 | 2.81e-12 | 67.4 |
| MsG0680030763.01.T02 | MTR_6g012170 | 95.625 | 320 | 14 | 0 | 1 | 320 | 1 | 320 | 0.0 | 585 |
| MsG0680030763.01.T02 | MTR_6g012160 | 92.857 | 294 | 21 | 0 | 1 | 294 | 1 | 294 | 0.0 | 522 |
| MsG0680030763.01.T02 | MTR_8g064610 | 68.471 | 314 | 98 | 1 | 7 | 320 | 72 | 384 | 3.97e-154 | 437 |
| MsG0680030763.01.T02 | MTR_7g034395 | 72.492 | 309 | 85 | 0 | 12 | 320 | 9 | 317 | 1.31e-146 | 415 |
| MsG0680030763.01.T02 | MTR_8g035630 | 46.624 | 311 | 160 | 5 | 12 | 320 | 5 | 311 | 8.39e-88 | 267 |
| MsG0680030763.01.T02 | MTR_8g035880 | 47.231 | 307 | 156 | 5 | 12 | 316 | 5 | 307 | 3.31e-87 | 265 |
| MsG0680030763.01.T02 | MTR_6g012140 | 87.234 | 141 | 18 | 0 | 179 | 319 | 3 | 143 | 2.57e-84 | 251 |
| MsG0680030763.01.T02 | MTR_1319s0010 | 71.963 | 107 | 30 | 0 | 73 | 179 | 3 | 109 | 1.13e-41 | 140 |
| MsG0680030763.01.T02 | MTR_7g055743 | 34.132 | 334 | 169 | 11 | 13 | 317 | 57 | 368 | 4.31e-38 | 139 |
| MsG0680030763.01.T02 | MTR_4g036310 | 35.866 | 329 | 173 | 12 | 16 | 317 | 11 | 328 | 2.18e-37 | 136 |
| MsG0680030763.01.T02 | MTR_4g032995 | 32.803 | 314 | 174 | 7 | 32 | 318 | 26 | 329 | 6.11e-35 | 130 |
| MsG0680030763.01.T02 | MTR_4g033205 | 32.803 | 314 | 174 | 7 | 32 | 318 | 26 | 329 | 7.00e-35 | 129 |
| MsG0680030763.01.T02 | MTR_6g012100 | 88.710 | 62 | 7 | 0 | 259 | 320 | 8 | 69 | 2.02e-32 | 115 |
| MsG0680030763.01.T02 | MTR_2g078520 | 31.098 | 328 | 180 | 10 | 26 | 316 | 40 | 358 | 7.01e-30 | 117 |
| MsG0680030763.01.T02 | MTR_4g036260 | 33.091 | 275 | 148 | 7 | 70 | 318 | 44 | 308 | 5.19e-29 | 113 |
| MsG0680030763.01.T02 | MTR_4g050760 | 27.879 | 330 | 182 | 13 | 24 | 316 | 13 | 323 | 1.09e-25 | 105 |
| MsG0680030763.01.T02 | MTR_2g012380 | 27.879 | 330 | 182 | 13 | 24 | 316 | 13 | 323 | 1.09e-25 | 105 |
| MsG0680030763.01.T02 | MTR_2g012420 | 29.755 | 326 | 181 | 13 | 24 | 316 | 13 | 323 | 1.19e-25 | 104 |
| MsG0680030763.01.T02 | MTR_2g012380 | 29.752 | 242 | 139 | 9 | 24 | 251 | 13 | 237 | 2.75e-22 | 94.7 |
| MsG0680030763.01.T02 | MTR_4g086400 | 25.868 | 317 | 182 | 9 | 40 | 316 | 177 | 480 | 7.68e-20 | 90.1 |
| MsG0680030763.01.T02 | MTR_4g086400 | 25.868 | 317 | 182 | 9 | 40 | 316 | 317 | 620 | 9.07e-20 | 90.1 |
| MsG0680030763.01.T02 | MTR_4g086410 | 25.714 | 315 | 181 | 9 | 42 | 316 | 319 | 620 | 1.16e-19 | 90.1 |
| MsG0680030763.01.T02 | MTR_4g036170 | 29.310 | 290 | 163 | 7 | 54 | 317 | 30 | 303 | 2.28e-19 | 87.0 |
| MsG0680030763.01.T02 | MTR_6g039950 | 57.576 | 66 | 28 | 0 | 6 | 71 | 14 | 79 | 2.49e-18 | 78.6 |
| MsG0680030763.01.T02 | MTR_3g093620 | 28.213 | 319 | 179 | 11 | 35 | 316 | 30 | 335 | 2.40e-14 | 73.2 |
| MsG0680030763.01.T02 | MTR_2g012420 | 28.390 | 236 | 131 | 10 | 114 | 316 | 22 | 252 | 2.71e-14 | 72.0 |
| MsG0680030763.01.T02 | MTR_4g050710 | 28.390 | 236 | 131 | 10 | 114 | 316 | 16 | 246 | 2.79e-14 | 71.6 |
| MsG0680030763.01.T02 | MTR_2g012420 | 28.125 | 192 | 102 | 8 | 157 | 316 | 4 | 191 | 1.82e-12 | 65.5 |
| MsG0680030763.01.T02 | MTR_8g095220 | 24.084 | 382 | 211 | 14 | 6 | 316 | 49 | 422 | 2.81e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030763.01.T01 | AT1G23740 | 65.079 | 315 | 109 | 1 | 6 | 320 | 73 | 386 | 4.23e-143 | 409 |
| MsG0680030763.01.T01 | AT4G13010 | 32.530 | 332 | 182 | 10 | 16 | 318 | 11 | 329 | 6.28e-35 | 130 |
| MsG0680030763.01.T01 | AT3G15090 | 32.685 | 257 | 159 | 8 | 1 | 251 | 22 | 270 | 4.02e-30 | 117 |
| MsG0680030763.01.T01 | AT4G21580 | 28.319 | 339 | 194 | 12 | 12 | 317 | 2 | 324 | 2.94e-25 | 103 |
| MsG0680030763.01.T01 | AT4G21580 | 27.811 | 338 | 191 | 12 | 12 | 317 | 2 | 318 | 3.66e-24 | 100 |
| MsG0680030763.01.T01 | AT3G56460 | 29.154 | 319 | 178 | 11 | 33 | 316 | 31 | 336 | 2.36e-21 | 93.2 |
| MsG0680030763.01.T01 | AT1G49670 | 26.316 | 323 | 183 | 12 | 35 | 320 | 316 | 620 | 1.17e-18 | 87.0 |
| MsG0680030763.01.T01 | AT1G49670 | 25.291 | 344 | 183 | 12 | 35 | 320 | 316 | 643 | 6.32e-18 | 84.7 |
| MsG0680030763.01.T01 | AT3G45770 | 28.458 | 253 | 157 | 8 | 11 | 250 | 45 | 286 | 4.51e-16 | 78.6 |
| MsG0680030763.01.T01 | AT5G63620 | 26.224 | 286 | 144 | 10 | 29 | 251 | 63 | 344 | 3.15e-11 | 64.3 |
| MsG0680030763.01.T01 | AT5G63620 | 26.224 | 286 | 144 | 10 | 29 | 251 | 63 | 344 | 3.15e-11 | 64.3 |
| MsG0680030763.01.T02 | AT1G23740 | 65.079 | 315 | 109 | 1 | 6 | 320 | 73 | 386 | 4.23e-143 | 409 |
| MsG0680030763.01.T02 | AT4G13010 | 32.530 | 332 | 182 | 10 | 16 | 318 | 11 | 329 | 6.28e-35 | 130 |
| MsG0680030763.01.T02 | AT3G15090 | 32.685 | 257 | 159 | 8 | 1 | 251 | 22 | 270 | 4.02e-30 | 117 |
| MsG0680030763.01.T02 | AT4G21580 | 28.319 | 339 | 194 | 12 | 12 | 317 | 2 | 324 | 2.94e-25 | 103 |
| MsG0680030763.01.T02 | AT4G21580 | 27.811 | 338 | 191 | 12 | 12 | 317 | 2 | 318 | 3.66e-24 | 100 |
| MsG0680030763.01.T02 | AT3G56460 | 29.154 | 319 | 178 | 11 | 33 | 316 | 31 | 336 | 2.36e-21 | 93.2 |
| MsG0680030763.01.T02 | AT1G49670 | 26.316 | 323 | 183 | 12 | 35 | 320 | 316 | 620 | 1.17e-18 | 87.0 |
| MsG0680030763.01.T02 | AT1G49670 | 25.291 | 344 | 183 | 12 | 35 | 320 | 316 | 643 | 6.32e-18 | 84.7 |
| MsG0680030763.01.T02 | AT3G45770 | 28.458 | 253 | 157 | 8 | 11 | 250 | 45 | 286 | 4.51e-16 | 78.6 |
| MsG0680030763.01.T02 | AT5G63620 | 26.224 | 286 | 144 | 10 | 29 | 251 | 63 | 344 | 3.15e-11 | 64.3 |
| MsG0680030763.01.T02 | AT5G63620 | 26.224 | 286 | 144 | 10 | 29 | 251 | 63 | 344 | 3.15e-11 | 64.3 |
Find 21 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTAATATCAACAGGATTA+AGG | 0.239762 | 6:+8731277 | None:intergenic |
| GCTTGGGTTTACTCTCAATA+TGG | 0.324385 | 6:-8731390 | MsG0680030763.01.T01:CDS |
| CTTAATATCAACAGGATTAA+GGG | 0.365726 | 6:+8731278 | None:intergenic |
| TTAATCCTGTTGATATTAAG+AGG | 0.366846 | 6:-8731275 | MsG0680030763.01.T01:CDS |
| GGGTGTGGTGTAGGGACATT+AGG | 0.399291 | 6:+8731339 | None:intergenic |
| ATGAGCACTTGATCTTCTCT+AGG | 0.411783 | 6:+8731318 | None:intergenic |
| TCCATCTCATACAAAAGCTT+GGG | 0.417415 | 6:-8731406 | MsG0680030763.01.T01:CDS |
| GAGGGCTCTTGGTCATTTCA+AGG | 0.427218 | 6:-8731256 | MsG0680030763.01.T01:CDS |
| CTTCTCTAGGGTGTGGTGTA+GGG | 0.431980 | 6:+8731331 | None:intergenic |
| TCTTCTCTAGGGTGTGGTGT+AGG | 0.438979 | 6:+8731330 | None:intergenic |
| TTCCATCTCATACAAAAGCT+TGG | 0.442056 | 6:-8731407 | MsG0680030763.01.T01:CDS |
| AGAGCCCTCTTAATATCAAC+AGG | 0.464124 | 6:+8731270 | None:intergenic |
| ATGATCACTTTGCTACTAAG+AGG | 0.493924 | 6:+8731447 | None:intergenic |
| TCTTAGTAGCAAAGTGATCA+TGG | 0.500602 | 6:-8731445 | MsG0680030763.01.T01:intron |
| GTTGATATTAAGAGGGCTCT+TGG | 0.500705 | 6:-8731267 | MsG0680030763.01.T01:CDS |
| TGAGCACTTGATCTTCTCTA+GGG | 0.532012 | 6:+8731319 | None:intergenic |
| TATAATGTTGAACTTTGTGT+TGG | 0.535951 | 6:+8731501 | None:intergenic |
| ACTTGATCTTCTCTAGGGTG+TGG | 0.546580 | 6:+8731324 | None:intergenic |
| TAATCCTGTTGATATTAAGA+GGG | 0.592527 | 6:-8731274 | MsG0680030763.01.T01:CDS |
| GATTGCAATCTTACTGGCAA+AGG | 0.597841 | 6:+8731222 | None:intergenic |
| AGAAGATCAAGTGCTCATCA+AGG | 0.612803 | 6:-8731313 | MsG0680030763.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATTATATATTTGCAA+AGG | + | Chr6:8729780-8729799 | None:intergenic | 15.0% |
| !! | AAGAGGAAAAAATATATAAA+AGG | + | Chr6:8729404-8729423 | None:intergenic | 15.0% |
| !! | AATATAAATGAAAACTTCTA+CGG | + | Chr6:8729723-8729742 | None:intergenic | 15.0% |
| !! | AGAAATAATTATGATTTAAG+TGG | + | Chr6:8729907-8729926 | None:intergenic | 15.0% |
| !! | AGAGGAAAAAATATATAAAA+GGG | + | Chr6:8729403-8729422 | None:intergenic | 15.0% |
| !! | GGAATAAAGAAATATTAAAT+AGG | + | Chr6:8731077-8731096 | None:intergenic | 15.0% |
| !!! | AACAAAGAATTTTTTTTTAC+AGG | + | Chr6:8729752-8729771 | None:intergenic | 15.0% |
| !!! | CATTTTTTATTTTAATCTTG+TGG | - | Chr6:8730587-8730606 | MsG0680030763.01.T01:CDS | 15.0% |
| !! | AAATTATTTAATTACGCTGA+CGG | + | Chr6:8729840-8729859 | None:intergenic | 20.0% |
| !! | AAGTTAAGGACAAATTATTT+GGG | + | Chr6:8730709-8730728 | None:intergenic | 20.0% |
| !! | TAAGTTAAGGACAAATTATT+TGG | + | Chr6:8730710-8730729 | None:intergenic | 20.0% |
| !! | TATTTCTTTATTCCAAACAT+AGG | - | Chr6:8731083-8731102 | MsG0680030763.01.T01:intron | 20.0% |
| !!! | ACTTGAATTTTTGAGAAAAT+TGG | - | Chr6:8730883-8730902 | MsG0680030763.01.T01:intron | 20.0% |
| !!! | CTTGAATTTTTGAGAAAATT+GGG | - | Chr6:8730884-8730903 | MsG0680030763.01.T01:intron | 20.0% |
| !!! | TCTAAAATCACACATATAAT+TGG | - | Chr6:8729924-8729943 | MsG0680030763.01.T01:CDS | 20.0% |
| ! | AAGCAGTAATTATTGCTAAA+GGG | + | Chr6:8730270-8730289 | None:intergenic | 25.0% |
| ! | AATCGTTAATGTTTGGAAAT+TGG | - | Chr6:8731505-8731524 | MsG0680030763.01.T01:five_prime_UTR | 25.0% |
| ! | ACTTACTGAAAAATTTGATG+TGG | - | Chr6:8730949-8730968 | MsG0680030763.01.T01:intron | 25.0% |
| ! | AGACCAAGTAAAGAAATTTA+AGG | - | Chr6:8730099-8730118 | MsG0680030763.01.T01:intron | 25.0% |
| ! | CAACCTTAAATTTCTTTACT+TGG | + | Chr6:8730105-8730124 | None:intergenic | 25.0% |
| ! | CTTAATATCAACAGGATTAA+GGG | + | Chr6:8729590-8729609 | None:intergenic | 25.0% |
| ! | CTTGAAATTTAAGTCATAGA+TGG | + | Chr6:8729670-8729689 | None:intergenic | 25.0% |
| ! | GTTCTAATCAGAAATATAAC+AGG | - | Chr6:8730493-8730512 | MsG0680030763.01.T01:intron | 25.0% |
| ! | TAAGCAGTAATTATTGCTAA+AGG | + | Chr6:8730271-8730290 | None:intergenic | 25.0% |
| ! | TAATCCTGTTGATATTAAGA+GGG | - | Chr6:8729591-8729610 | MsG0680030763.01.T01:CDS | 25.0% |
| ! | TATAATGTTGAACTTTGTGT+TGG | + | Chr6:8729367-8729386 | None:intergenic | 25.0% |
| ! | TCAACAAAACTCAAATTTGA+TGG | + | Chr6:8730235-8730254 | None:intergenic | 25.0% |
| ! | TCAATACAAATAGAGCTATT+GGG | - | Chr6:8731321-8731340 | MsG0680030763.01.T01:CDS | 25.0% |
| ! | TCTATACTAGGAAATAAGAT+AGG | - | Chr6:8730405-8730424 | MsG0680030763.01.T01:intron | 25.0% |
| ! | TCTTAATATCAACAGGATTA+AGG | + | Chr6:8729591-8729610 | None:intergenic | 25.0% |
| ! | TTAATCCTGTTGATATTAAG+AGG | - | Chr6:8729590-8729609 | MsG0680030763.01.T01:CDS | 25.0% |
| ! | TTACACAATCCAAAAACTAT+TGG | - | Chr6:8730160-8730179 | MsG0680030763.01.T01:intron | 25.0% |
| ! | TTCAAAAGATACTCTATACT+AGG | - | Chr6:8730393-8730412 | MsG0680030763.01.T01:intron | 25.0% |
| !! | AAATGTTCATCTTATTTCCT+AGG | + | Chr6:8730572-8730591 | None:intergenic | 25.0% |
| !! | AATGTTCATCTTATTTCCTA+GGG | + | Chr6:8730571-8730590 | None:intergenic | 25.0% |
| !! | AATTGGTAGTAATTTCTTGA+CGG | - | Chr6:8729941-8729960 | MsG0680030763.01.T01:CDS | 25.0% |
| !! | CAAGTAAAGAAATTTAAGGT+TGG | - | Chr6:8730103-8730122 | MsG0680030763.01.T01:intron | 25.0% |
| !! | TGGAATGCAATTATTTGTTT+TGG | - | Chr6:8730797-8730816 | MsG0680030763.01.T01:CDS | 25.0% |
| !! | TGTACTATTTTGTCATCTAA+TGG | - | Chr6:8730777-8730796 | MsG0680030763.01.T01:CDS | 25.0% |
| !!! | GCTTTGAATTTGTACTATTT+TGG | - | Chr6:8731401-8731420 | MsG0680030763.01.T01:CDS | 25.0% |
| !!! | GTTTTACTTTGATAACTTGT+TGG | + | Chr6:8729976-8729995 | None:intergenic | 25.0% |
| !!! | GTTTTATTCTTTCTTTTGTG+TGG | - | Chr6:8730022-8730041 | MsG0680030763.01.T01:CDS | 25.0% |
| AAATCTATACTTGTTCTTGC+AGG | - | Chr6:8730325-8730344 | MsG0680030763.01.T01:intron | 30.0% | |
| AAGTTCTTCATAATTCTCCT+TGG | + | Chr6:8730933-8730952 | None:intergenic | 30.0% | |
| AATCAAGCACATCAATTTCA+TGG | - | Chr6:8731379-8731398 | MsG0680030763.01.T01:CDS | 30.0% | |
| ACAGTATGAGAAAATGGAAA+GGG | + | Chr6:8731284-8731303 | None:intergenic | 30.0% | |
| AGCTCTATTTGTATTGAGAT+AGG | + | Chr6:8731318-8731337 | None:intergenic | 30.0% | |
| ATCCATTGGTCAATATAAGT+TGG | - | Chr6:8730729-8730748 | MsG0680030763.01.T01:CDS | 30.0% | |
| ATTATTCATGCTCATGGAAT+GGG | + | Chr6:8731362-8731381 | None:intergenic | 30.0% | |
| ATTGACCAATGGATAAGTTA+AGG | + | Chr6:8730723-8730742 | None:intergenic | 30.0% | |
| CTCAATACAAATAGAGCTAT+TGG | - | Chr6:8731320-8731339 | MsG0680030763.01.T01:CDS | 30.0% | |
| GCAATAATTACTGCTTATCA+AGG | - | Chr6:8730274-8730293 | MsG0680030763.01.T01:intron | 30.0% | |
| GTCAGATTATACTTATCTTC+TGG | + | Chr6:8730651-8730670 | None:intergenic | 30.0% | |
| TCCAAACATTAACGATTTCT+TGG | + | Chr6:8731502-8731521 | None:intergenic | 30.0% | |
| TCCAAGAAATCGTTAATGTT+TGG | - | Chr6:8731498-8731517 | MsG0680030763.01.T01:five_prime_UTR | 30.0% | |
| TTTGTCCTTAACTTATCCAT+TGG | - | Chr6:8730715-8730734 | MsG0680030763.01.T01:CDS | 30.0% | |
| ! | GACAAAGAACCAATAGTTTT+TGG | + | Chr6:8730172-8730191 | None:intergenic | 30.0% |
| ! | TTCTGGTCAATCTTTTGTTA+AGG | + | Chr6:8730537-8730556 | None:intergenic | 30.0% |
| !! | ATTTTAGTCTGACTTTAACG+AGG | + | Chr6:8730472-8730491 | None:intergenic | 30.0% |
| !!! | ACTTTGCCATTTTCCAAATA+AGG | + | Chr6:8731236-8731255 | None:intergenic | 30.0% |
| !!! | CTTTGCCATTTTCCAAATAA+GGG | + | Chr6:8731235-8731254 | None:intergenic | 30.0% |
| AAAATGGAAAGGGACTCTTA+GGG | + | Chr6:8731274-8731293 | None:intergenic | 35.0% | |
| AAGGTTGGAGATGAAGTTTA+TGG | - | Chr6:8730118-8730137 | MsG0680030763.01.T01:intron | 35.0% | |
| AGCCAACTTATATTGACCAA+TGG | + | Chr6:8730734-8730753 | None:intergenic | 35.0% | |
| ATGATCACTTTGCTACTAAG+AGG | + | Chr6:8729421-8729440 | None:intergenic | 35.0% | |
| CACAGTATGAGAAAATGGAA+AGG | + | Chr6:8731285-8731304 | None:intergenic | 35.0% | |
| CAGAAGATAAGTAAATCCCT+AGG | - | Chr6:8730552-8730571 | MsG0680030763.01.T01:CDS | 35.0% | |
| CTAGGGATTTACTTATCTTC+TGG | + | Chr6:8730554-8730573 | None:intergenic | 35.0% | |
| CTTGGCAATTGATTATACCA+AGG | - | Chr6:8730913-8730932 | MsG0680030763.01.T01:intron | 35.0% | |
| GATTATTCATGCTCATGGAA+TGG | + | Chr6:8731363-8731382 | None:intergenic | 35.0% | |
| TCCATCTCATACAAAAGCTT+GGG | - | Chr6:8729459-8729478 | MsG0680030763.01.T01:three_prime_UTR | 35.0% | |
| TCTTAGTAGCAAAGTGATCA+TGG | - | Chr6:8729420-8729439 | MsG0680030763.01.T01:three_prime_UTR | 35.0% | |
| TGCTTGATTATTCATGCTCA+TGG | + | Chr6:8731368-8731387 | None:intergenic | 35.0% | |
| TGGCAAAGTGAAACCAATAT+TGG | - | Chr6:8731247-8731266 | MsG0680030763.01.T01:CDS | 35.0% | |
| TTATCTTCTGGTCAAACCTA+CGG | + | Chr6:8730639-8730658 | None:intergenic | 35.0% | |
| TTCCATCTCATACAAAAGCT+TGG | - | Chr6:8729458-8729477 | MsG0680030763.01.T01:three_prime_UTR | 35.0% | |
| ! | AAACATAGGTGATAGTGAGA+GGG | - | Chr6:8731097-8731116 | MsG0680030763.01.T01:intron | 35.0% |
| ! | CATCTGAAGTGAGTAAGAAA+GGG | + | Chr6:8731190-8731209 | None:intergenic | 35.0% |
| ! | CTTTCCATTTTCTCATACTG+TGG | - | Chr6:8731283-8731302 | MsG0680030763.01.T01:CDS | 35.0% |
| ! | GAAAGAGTTGAATTTTCTGC+TGG | - | Chr6:8730301-8730320 | MsG0680030763.01.T01:intron | 35.0% |
| ! | TTGCTCCCTTATTTGGAAAA+TGG | - | Chr6:8731227-8731246 | MsG0680030763.01.T01:intron | 35.0% |
| !! | AGTTGGATCTCTTGTTATTC+AGG | - | Chr6:8730357-8730376 | MsG0680030763.01.T01:intron | 35.0% |
| AGAAGATCAAGTGCTCATCA+AGG | - | Chr6:8729552-8729571 | MsG0680030763.01.T01:CDS | 40.0% | |
| AGAGCCCTCTTAATATCAAC+AGG | + | Chr6:8729598-8729617 | None:intergenic | 40.0% | |
| AGATGCCTCAAAAACATGCT+TGG | + | Chr6:8730834-8730853 | None:intergenic | 40.0% | |
| ATGAGCACTTGATCTTCTCT+AGG | + | Chr6:8729550-8729569 | None:intergenic | 40.0% | |
| CCTTTCTTACTCACTTCAGA+TGG | - | Chr6:8731188-8731207 | MsG0680030763.01.T01:intron | 40.0% | |
| CTCTCACTATCACCTATGTT+TGG | + | Chr6:8731098-8731117 | None:intergenic | 40.0% | |
| GAAAATGGAAAGGGACTCTT+AGG | + | Chr6:8731275-8731294 | None:intergenic | 40.0% | |
| GATGGTGATTGCAATCTTAC+TGG | + | Chr6:8729652-8729671 | None:intergenic | 40.0% | |
| GATTGCAATCTTACTGGCAA+AGG | + | Chr6:8729646-8729665 | None:intergenic | 40.0% | |
| GCTTCCACAGTATGAGAAAA+TGG | + | Chr6:8731290-8731309 | None:intergenic | 40.0% | |
| GCTTGGGTTTACTCTCAATA+TGG | - | Chr6:8729475-8729494 | MsG0680030763.01.T01:three_prime_UTR | 40.0% | |
| GGAGAAATTGCTCCCTTATT+TGG | - | Chr6:8731220-8731239 | MsG0680030763.01.T01:intron | 40.0% | |
| GTTGATATTAAGAGGGCTCT+TGG | - | Chr6:8729598-8729617 | MsG0680030763.01.T01:CDS | 40.0% | |
| GTTGTGACAATATTACCACC+TGG | - | Chr6:8731149-8731168 | MsG0680030763.01.T01:intron | 40.0% | |
| TAACGAGGTTCTCGTTTCTT+GGG | + | Chr6:8730457-8730476 | None:intergenic | 40.0% | |
| TGAGCACTTGATCTTCTCTA+GGG | + | Chr6:8729549-8729568 | None:intergenic | 40.0% | |
| TGTTCCAACCAGAAATCGAA+CGG | - | Chr6:8730678-8730697 | MsG0680030763.01.T01:CDS | 40.0% | |
| TTAACGAGGTTCTCGTTTCT+TGG | + | Chr6:8730458-8730477 | None:intergenic | 40.0% | |
| ! | ACCCAAGCTTTTGTATGAGA+TGG | + | Chr6:8729463-8729482 | None:intergenic | 40.0% |
| ! | CAAACATAGGTGATAGTGAG+AGG | - | Chr6:8731096-8731115 | MsG0680030763.01.T01:intron | 40.0% |
| ! | CACAACTTTTCCTCCTTCAT+TGG | + | Chr6:8731135-8731154 | None:intergenic | 40.0% |
| ! | CCATCTGAAGTGAGTAAGAA+AGG | + | Chr6:8731191-8731210 | None:intergenic | 40.0% |
| ! | GTCAAACCTACGGATTATCA+GGG | + | Chr6:8730629-8730648 | None:intergenic | 40.0% |
| !!! | ATTATCAGGGTCGCTTTTCT+CGG | + | Chr6:8730616-8730635 | None:intergenic | 40.0% |
| ACACCAGCTACATCATATCC+TGG | + | Chr6:8730064-8730083 | None:intergenic | 45.0% | |
| AGGATATGATGTAGCTGGTG+TGG | - | Chr6:8730063-8730082 | MsG0680030763.01.T01:intron | 45.0% | |
| AGTAAGAAAGGGATAGCTGG+TGG | + | Chr6:8731179-8731198 | None:intergenic | 45.0% | |
| ATACTTGTTCTTGCAGGTGC+TGG | - | Chr6:8730331-8730350 | MsG0680030763.01.T01:intron | 45.0% | |
| ATATGATGTAGCTGGTGTGG+TGG | - | Chr6:8730066-8730085 | MsG0680030763.01.T01:intron | 45.0% | |
| GAGAAAATTGGGAGCAGACT+TGG | - | Chr6:8730895-8730914 | MsG0680030763.01.T01:intron | 45.0% | |
| GATGTGGTGTATGATGCAGT+AGG | - | Chr6:8730965-8730984 | MsG0680030763.01.T01:intron | 45.0% | |
| GGACTCTTAGGGTCCAATAT+TGG | + | Chr6:8731263-8731282 | None:intergenic | 45.0% | |
| GTGAGTAAGAAAGGGATAGC+TGG | + | Chr6:8731182-8731201 | None:intergenic | 45.0% | |
| TACGGTACACTCGCAAATTG+AGG | + | Chr6:8729705-8729724 | None:intergenic | 45.0% | |
| ! | GGTCAAACCTACGGATTATC+AGG | + | Chr6:8730630-8730649 | None:intergenic | 45.0% |
| !! | ACTTGATCTTCTCTAGGGTG+TGG | + | Chr6:8729544-8729563 | None:intergenic | 45.0% |
| !! | GAATCCGTTCGATTTCTGGT+TGG | + | Chr6:8730685-8730704 | None:intergenic | 45.0% |
| !! | GCTAGCCAAGCATGTTTTTG+AGG | - | Chr6:8730826-8730845 | MsG0680030763.01.T01:intron | 45.0% |
| AAGCGACCCTGATAATCCGT+AGG | - | Chr6:8730620-8730639 | MsG0680030763.01.T01:CDS | 50.0% | |
| CACTTCAGATGGAGCTGTGT+TGG | - | Chr6:8731199-8731218 | MsG0680030763.01.T01:intron | 50.0% | |
| GAGGGCTCTTGGTCATTTCA+AGG | - | Chr6:8729609-8729628 | MsG0680030763.01.T01:CDS | 50.0% | |
| GGGAGAATCCGTTCGATTTC+TGG | + | Chr6:8730689-8730708 | None:intergenic | 50.0% | |
| GTGCCAGGATATGATGTAGC+TGG | - | Chr6:8730058-8730077 | MsG0680030763.01.T01:intron | 50.0% | |
| ! | TGATAGTGAGAGGGCAGTGA+AGG | - | Chr6:8731106-8731125 | MsG0680030763.01.T01:intron | 50.0% |
| !! | CTTCTCTAGGGTGTGGTGTA+GGG | + | Chr6:8729537-8729556 | None:intergenic | 50.0% |
| !! | TCTTCTCTAGGGTGTGGTGT+AGG | + | Chr6:8729538-8729557 | None:intergenic | 50.0% |
| ATAGCTGGTGGAGTTCCAGG+TGG | + | Chr6:8731167-8731186 | None:intergenic | 55.0% | |
| GCAGTGAAGGCTGCCAATGA+AGG | - | Chr6:8731119-8731138 | MsG0680030763.01.T01:intron | 55.0% | |
| GCTGGTGTGGTGGTTAGTGT+TGG | - | Chr6:8730076-8730095 | MsG0680030763.01.T01:intron | 55.0% | |
| GGGTGTGGTGTAGGGACATT+AGG | + | Chr6:8729529-8729548 | None:intergenic | 55.0% | |
| GGTGATGTGAAGACTGTGCC+AGG | - | Chr6:8730043-8730062 | MsG0680030763.01.T01:intron | 55.0% | |
| GTGAAGGCTGCCAATGAAGG+AGG | - | Chr6:8731122-8731141 | MsG0680030763.01.T01:intron | 55.0% | |
| !! | CTTGTTCTTGCAGGTGCTGG+AGG | - | Chr6:8730334-8730353 | MsG0680030763.01.T01:intron | 55.0% |
| GGGATAGCTGGTGGAGTTCC+AGG | + | Chr6:8731170-8731189 | None:intergenic | 60.0% | |
| !! | CTTGCAGGTGCTGGAGGAGT+TGG | - | Chr6:8730340-8730359 | MsG0680030763.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 8729347 | 8731540 | 8729347 | ID=MsG0680030763.01;Name=MsG0680030763.01 |
| Chr6 | mRNA | 8729347 | 8731540 | 8729347 | ID=MsG0680030763.01.T01;Parent=MsG0680030763.01;Name=MsG0680030763.01.T01;_AED=0.44;_eAED=0.44;_QI=71|1|1|1|0.75|0.6|5|170|320 |
| Chr6 | exon | 8731236 | 8731461 | 8731236 | ID=MsG0680030763.01.T01:exon:7240;Parent=MsG0680030763.01.T01 |
| Chr6 | exon | 8731483 | 8731540 | 8731483 | ID=MsG0680030763.01.T01:exon:7239;Parent=MsG0680030763.01.T01 |
| Chr6 | five_prime_UTR | 8731483 | 8731540 | 8731483 | ID=MsG0680030763.01.T01:five_prime_utr;Parent=MsG0680030763.01.T01 |
| Chr6 | five_prime_UTR | 8731449 | 8731461 | 8731449 | ID=MsG0680030763.01.T01:five_prime_utr;Parent=MsG0680030763.01.T01 |
| Chr6 | CDS | 8731236 | 8731448 | 8731236 | ID=MsG0680030763.01.T01:cds;Parent=MsG0680030763.01.T01 |
| Chr6 | CDS | 8730509 | 8730832 | 8730509 | ID=MsG0680030763.01.T01:cds;Parent=MsG0680030763.01.T01 |
| Chr6 | CDS | 8729901 | 8730060 | 8729901 | ID=MsG0680030763.01.T01:cds;Parent=MsG0680030763.01.T01 |
| Chr6 | CDS | 8729517 | 8729782 | 8729517 | ID=MsG0680030763.01.T01:cds;Parent=MsG0680030763.01.T01 |
| Chr6 | three_prime_UTR | 8729347 | 8729516 | 8729347 | ID=MsG0680030763.01.T01:three_prime_utr;Parent=MsG0680030763.01.T01 |
| Chr6 | mRNA | 8729347 | 8731535 | 8729347 | ID=MsG0680030763.01.T02;Parent=MsG0680030763.01;Name=MsG0680030763.01.T02;_AED=0.44;_eAED=0.44;_QI=87|1|1|1|1|1|4|170|320 |
| Chr6 | exon | 8731236 | 8731535 | 8731236 | ID=MsG0680030763.01.T02:exon:7244;Parent=MsG0680030763.01.T02 |
| Chr6 | five_prime_UTR | 8731449 | 8731535 | 8731449 | ID=MsG0680030763.01.T02:five_prime_utr;Parent=MsG0680030763.01.T02 |
| Chr6 | CDS | 8731236 | 8731448 | 8731236 | ID=MsG0680030763.01.T02:cds;Parent=MsG0680030763.01.T02 |
| Chr6 | CDS | 8730509 | 8730832 | 8730509 | ID=MsG0680030763.01.T02:cds;Parent=MsG0680030763.01.T02 |
| Chr6 | CDS | 8729901 | 8730060 | 8729901 | ID=MsG0680030763.01.T02:cds;Parent=MsG0680030763.01.T02 |
| Chr6 | CDS | 8729517 | 8729782 | 8729517 | ID=MsG0680030763.01.T02:cds;Parent=MsG0680030763.01.T02 |
| Chr6 | three_prime_UTR | 8729347 | 8729516 | 8729347 | ID=MsG0680030763.01.T02:three_prime_utr;Parent=MsG0680030763.01.T02 |
| Gene Sequence |
| Protein sequence |
