Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580030181.01.T01 | XP_003618076.1 | 89.555 | 517 | 21 | 2 | 53 | 536 | 192 | 708 | 0 | 938 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580030181.01.T01 | P19143 | 81.431 | 517 | 63 | 2 | 53 | 536 | 194 | 710 | 0 | 857 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580030181.01.T01 | G7K0Q0 | 89.555 | 517 | 21 | 2 | 53 | 536 | 192 | 708 | 0.0 | 938 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0580030181.01 | 0.813542 | 2.428395e-51 | 1.590371e-48 |
| MsG0080048301.01 | MsG0580030181.01 | 0.810250 | 1.265342e-50 | 7.589810e-48 |
| MsG0080048345.01 | MsG0580030181.01 | 0.804381 | 2.219771e-49 | 1.142873e-46 |
| MsG0080048347.01 | MsG0580030181.01 | 0.862172 | 6.115863e-64 | 1.774632e-60 |
| MsG0080048349.01 | MsG0580030181.01 | 0.826945 | 2.053196e-54 | 1.953861e-51 |
| MsG0080048352.01 | MsG0580030181.01 | 0.856621 | 2.841833e-62 | 6.823638e-59 |
| MsG0080049015.01 | MsG0580030181.01 | -0.806188 | 9.284964e-50 | 5.007842e-47 |
| MsG0180000738.01 | MsG0580030181.01 | 0.806470 | 8.099483e-50 | 4.399827e-47 |
| MsG0180001072.01 | MsG0580030181.01 | -0.808777 | 2.621971e-50 | 1.512416e-47 |
| MsG0180001533.01 | MsG0580030181.01 | 0.806894 | 6.591446e-50 | 3.619719e-47 |
| MsG0180002935.01 | MsG0580030181.01 | 0.832560 | 8.819288e-56 | 9.893574e-53 |
| MsG0180003235.01 | MsG0580030181.01 | 0.805748 | 1.149036e-49 | 6.128092e-47 |
| MsG0180004150.01 | MsG0580030181.01 | 0.806920 | 6.507966e-50 | 3.576332e-47 |
| MsG0180004203.01 | MsG0580030181.01 | 0.800621 | 1.322719e-48 | 6.187574e-46 |
| MsG0180005356.01 | MsG0580030181.01 | 0.829594 | 4.716743e-55 | 4.849668e-52 |
| MsG0180005357.01 | MsG0580030181.01 | 0.813909 | 2.016003e-51 | 1.333420e-48 |
| MsG0180005358.01 | MsG0580030181.01 | 0.837144 | 6.179736e-57 | 7.955105e-54 |
| MsG0280006442.01 | MsG0580030181.01 | 0.851952 | 6.346896e-61 | 1.305646e-57 |
| MsG0280010802.01 | MsG0580030181.01 | 0.820677 | 6.043780e-53 | 4.813710e-50 |
| MsG0380011635.01 | MsG0580030181.01 | 0.828315 | 9.626822e-55 | 9.534059e-52 |
| MsG0380011974.01 | MsG0580030181.01 | 0.817122 | 3.883943e-52 | 2.804053e-49 |
| MsG0380012654.01 | MsG0580030181.01 | 0.811911 | 5.525010e-51 | 3.462956e-48 |
| MsG0480019107.01 | MsG0580030181.01 | 0.800643 | 1.308820e-48 | 6.126067e-46 |
| MsG0480019923.01 | MsG0580030181.01 | 0.809728 | 1.639543e-50 | 9.701019e-48 |
| MsG0480022309.01 | MsG0580030181.01 | 0.891157 | 5.133119e-74 | 4.448625e-70 |
| MsG0480022310.01 | MsG0580030181.01 | 0.826333 | 2.873124e-54 | 2.686431e-51 |
| MsG0480022735.01 | MsG0580030181.01 | 0.840520 | 8.275564e-58 | 1.181842e-54 |
| MsG0480022736.01 | MsG0580030181.01 | 0.826645 | 2.421198e-54 | 2.284051e-51 |
| MsG0480022833.01 | MsG0580030181.01 | 0.870361 | 1.546441e-66 | 5.998145e-63 |
| MsG0480023349.01 | MsG0580030181.01 | 0.845810 | 3.219222e-59 | 5.430372e-56 |
| MsG0580024176.01 | MsG0580030181.01 | 0.800227 | 1.590891e-48 | 7.368049e-46 |
| MsG0580024202.01 | MsG0580030181.01 | 0.835383 | 1.732328e-56 | 2.115003e-53 |
| MsG0580024207.01 | MsG0580030181.01 | 0.822682 | 2.078435e-53 | 1.751852e-50 |
| MsG0580024218.01 | MsG0580030181.01 | 0.827945 | 1.181933e-54 | 1.158028e-51 |
| MsG0580024219.01 | MsG0580030181.01 | 0.811794 | 5.859357e-51 | 3.661172e-48 |
| MsG0580024220.01 | MsG0580030181.01 | 0.823888 | 1.086928e-53 | 9.479040e-51 |
| MsG0580024408.01 | MsG0580030181.01 | 0.806707 | 7.216488e-50 | 3.943963e-47 |
| MsG0580024986.01 | MsG0580030181.01 | 0.822132 | 2.789248e-53 | 2.314342e-50 |
| MsG0580024990.01 | MsG0580030181.01 | 0.806986 | 6.301703e-50 | 3.468906e-47 |
| MsG0580025000.01 | MsG0580030181.01 | 0.809832 | 1.556970e-50 | 9.237543e-48 |
| MsG0580025023.01 | MsG0580030181.01 | 0.812393 | 4.336788e-51 | 2.754224e-48 |
| MsG0580025180.01 | MsG0580030181.01 | 0.816925 | 4.300917e-52 | 3.088518e-49 |
| MsG0580025870.01 | MsG0580030181.01 | 0.821308 | 4.326307e-53 | 3.506988e-50 |
| MsG0580026004.01 | MsG0580030181.01 | 0.804238 | 2.377294e-49 | 1.219414e-46 |
| MsG0380015130.01 | MsG0580030181.01 | 0.807931 | 3.971061e-50 | 2.240338e-47 |
| MsG0380015217.01 | MsG0580030181.01 | 0.818509 | 1.889118e-52 | 1.416849e-49 |
| MsG0380015323.01 | MsG0580030181.01 | 0.800428 | 1.447918e-48 | 6.740442e-46 |
| MsG0380015616.01 | MsG0580030181.01 | 0.827342 | 1.650028e-54 | 1.588679e-51 |
| MsG0380015629.01 | MsG0580030181.01 | 0.800427 | 1.448342e-48 | 6.742285e-46 |
| MsG0380016045.01 | MsG0580030181.01 | 0.802651 | 5.070862e-49 | 2.497397e-46 |
| MsG0380016255.01 | MsG0580030181.01 | 0.856952 | 2.271112e-62 | 5.513803e-59 |
| MsG0380016380.01 | MsG0580030181.01 | -0.801701 | 7.954248e-49 | 3.823790e-46 |
| MsG0380016931.01 | MsG0580030181.01 | -0.800700 | 1.274333e-48 | 5.973041e-46 |
| MsG0380016935.01 | MsG0580030181.01 | -0.809764 | 1.610307e-50 | 9.537400e-48 |
| MsG0380017151.01 | MsG0580030181.01 | 0.824215 | 9.107622e-54 | 8.015924e-51 |
| MsG0380017690.01 | MsG0580030181.01 | 0.848145 | 7.387649e-60 | 1.342725e-56 |
| MsG0380017699.01 | MsG0580030181.01 | 0.804870 | 1.754906e-49 | 9.150870e-47 |
| MsG0380018026.01 | MsG0580030181.01 | 0.802697 | 4.960754e-49 | 2.446160e-46 |
| MsG0580026492.01 | MsG0580030181.01 | 0.800238 | 1.583175e-48 | 7.334266e-46 |
| MsG0580026925.01 | MsG0580030181.01 | 0.805045 | 1.613440e-49 | 8.450191e-47 |
| MsG0580027638.01 | MsG0580030181.01 | 0.856873 | 2.396862e-62 | 5.803371e-59 |
| MsG0580028510.01 | MsG0580030181.01 | 0.819898 | 9.118064e-53 | 7.107383e-50 |
| MsG0580029296.01 | MsG0580030181.01 | 0.831273 | 1.833189e-55 | 1.979475e-52 |
| MsG0580029782.01 | MsG0580030181.01 | 0.819427 | 1.168068e-52 | 8.985980e-50 |
| MsG0580030133.01 | MsG0580030181.01 | 0.815783 | 7.743759e-52 | 5.390145e-49 |
| MsG0580030135.01 | MsG0580030181.01 | 0.807158 | 5.795934e-50 | 3.204754e-47 |
| MsG0580030145.01 | MsG0580030181.01 | 0.828438 | 8.992035e-55 | 8.937849e-52 |
| MsG0580030181.01 | MsG0680030336.01 | 0.808194 | 3.490590e-50 | 1.983163e-47 |
| MsG0580030181.01 | MsG0680030635.01 | -0.809619 | 1.729983e-50 | 1.020714e-47 |
| MsG0580030181.01 | MsG0680031009.01 | 0.837797 | 4.204993e-57 | 5.523306e-54 |
| MsG0580030181.01 | MsG0680035841.01 | 0.831806 | 1.354953e-55 | 1.486648e-52 |
| MsG0580030181.01 | MsG0780036661.01 | 0.802690 | 4.977109e-49 | 2.453751e-46 |
| MsG0580030181.01 | MsG0780037751.01 | 0.828668 | 7.911564e-55 | 7.916321e-52 |
| MsG0580030181.01 | MsG0780037917.01 | 0.827234 | 1.750734e-54 | 1.680187e-51 |
| MsG0580030181.01 | MsG0780037943.01 | 0.834150 | 3.539836e-56 | 4.164191e-53 |
| MsG0580030181.01 | MsG0780039576.01 | 0.856562 | 2.958496e-62 | 7.090965e-59 |
| MsG0580030181.01 | MsG0780039925.01 | 0.813334 | 2.697661e-51 | 1.756719e-48 |
| MsG0580030181.01 | MsG0780039968.01 | 0.845304 | 4.415766e-59 | 7.327195e-56 |
| MsG0580030181.01 | MsG0780040746.01 | 0.808337 | 3.254991e-50 | 1.856250e-47 |
| MsG0580030181.01 | MsG0780040977.01 | 0.810738 | 9.929424e-51 | 6.033579e-48 |
| MsG0580030181.01 | MsG0780041317.01 | 0.803884 | 2.816744e-49 | 1.431870e-46 |
| MsG0580030181.01 | MsG0780041556.01 | 0.817450 | 3.277570e-52 | 2.387769e-49 |
| MsG0580030181.01 | MsG0780041720.01 | -0.806382 | 8.453717e-50 | 4.581795e-47 |
| MsG0580030181.01 | MsG0880042740.01 | 0.803315 | 3.695763e-49 | 1.851302e-46 |
| MsG0580030181.01 | MsG0880042810.01 | 0.825183 | 5.387138e-54 | 4.875169e-51 |
| MsG0580030181.01 | MsG0880043345.01 | 0.825022 | 5.880499e-54 | 5.297189e-51 |
| MsG0580030181.01 | MsG0880043364.01 | 0.817378 | 3.402327e-52 | 2.473750e-49 |
| MsG0580030181.01 | MsG0880043481.01 | 0.813827 | 2.101631e-51 | 1.386986e-48 |
| MsG0580030181.01 | MsG0880043536.01 | 0.810512 | 1.110773e-50 | 6.708741e-48 |
| MsG0580030181.01 | MsG0880044972.01 | 0.818925 | 1.519741e-52 | 1.153118e-49 |
| MsG0580030181.01 | MsG0880045645.01 | 0.801693 | 7.983686e-49 | 3.837182e-46 |
| MsG0580030181.01 | MsG0880045968.01 | -0.800047 | 1.730883e-48 | 7.979822e-46 |
| MsG0580030181.01 | MsG0880046429.01 | 0.817553 | 3.106855e-52 | 2.269707e-49 |
| MsG0580030181.01 | MsG0880046863.01 | 0.803644 | 3.160061e-49 | 1.596395e-46 |
| MsG0580030181.01 | MsG0880047398.01 | 0.847260 | 1.294289e-59 | 2.287380e-56 |
| MsG0580030181.01 | MsG0880047714.01 | 0.830045 | 3.662817e-55 | 3.815355e-52 |
| MsG0280007216.01 | MsG0580030181.01 | 0.830080 | 3.592438e-55 | 3.745661e-52 |
| MsG0280007338.01 | MsG0580030181.01 | 0.802272 | 6.068234e-49 | 2.960028e-46 |
| MsG0280007911.01 | MsG0580030181.01 | 0.832865 | 7.408296e-56 | 8.386531e-53 |
| MsG0280009167.01 | MsG0580030181.01 | 0.831329 | 1.775106e-55 | 1.920042e-52 |
| MsG0280009656.01 | MsG0580030181.01 | 0.803973 | 2.699089e-49 | 1.375194e-46 |
| MsG0280010410.01 | MsG0580030181.01 | 0.826780 | 2.248142e-54 | 2.128955e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580030181.01.T01 | MTR_5g098720 | 89.555 | 517 | 21 | 2 | 53 | 536 | 192 | 708 | 0.0 | 938 |
| MsG0580030181.01.T01 | MTR_5g098720 | 79.487 | 39 | 8 | 0 | 9 | 47 | 80 | 118 | 3.69e-13 | 72.8 |
| MsG0580030181.01.T01 | MTR_1g064090 | 71.429 | 518 | 114 | 3 | 53 | 536 | 194 | 711 | 0.0 | 752 |
| MsG0580030181.01.T01 | MTR_7g101395 | 70.656 | 518 | 118 | 3 | 53 | 536 | 206 | 723 | 0.0 | 740 |
| MsG0580030181.01.T01 | MTR_7g101425 | 70.270 | 518 | 120 | 3 | 53 | 536 | 206 | 723 | 0.0 | 736 |
| MsG0580030181.01.T01 | MTR_1g094780 | 67.181 | 518 | 136 | 3 | 53 | 536 | 204 | 721 | 0.0 | 711 |
| MsG0580030181.01.T01 | MTR_2g094960 | 65.769 | 520 | 142 | 5 | 53 | 536 | 178 | 697 | 0.0 | 667 |
| MsG0580030181.01.T01 | MTR_2g095010 | 43.704 | 135 | 47 | 3 | 376 | 508 | 11 | 118 | 8.38e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580030181.01.T01 | AT2G37040 | 68.533 | 518 | 129 | 3 | 53 | 536 | 207 | 724 | 0.0 | 734 |
| MsG0580030181.01.T01 | AT3G53260 | 68.147 | 518 | 131 | 3 | 53 | 536 | 199 | 716 | 0.0 | 728 |
| MsG0580030181.01.T01 | AT3G10340 | 69.112 | 518 | 125 | 4 | 53 | 536 | 190 | 706 | 0.0 | 716 |
| MsG0580030181.01.T01 | AT5G04230 | 66.928 | 511 | 138 | 5 | 53 | 536 | 187 | 693 | 0.0 | 677 |
| MsG0580030181.01.T01 | AT5G04230 | 66.408 | 515 | 138 | 6 | 53 | 536 | 187 | 697 | 0.0 | 672 |
Find 134 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCGTATTCTTATTATTTA+TGG | 0.081070 | 5:-107914174 | None:intergenic |
| TCTTCAACATTTGAGAAAAT+TGG | 0.164220 | 5:+107914197 | MsG0580030181.01.T01:CDS |
| GACAAAGGTACTCCAATTTA+TGG | 0.176537 | 5:+107912409 | MsG0580030181.01.T01:CDS |
| GCTCATGTCGTCCACATATT+TGG | 0.218922 | 5:+107913889 | MsG0580030181.01.T01:CDS |
| CATTTAGCAGGACTGAATTC+TGG | 0.221247 | 5:+107913080 | MsG0580030181.01.T01:CDS |
| TAAACATTTGCAGATTATAT+TGG | 0.237879 | 5:-107914500 | None:intergenic |
| AATCGAGGCTGCTGCTATTA+TGG | 0.246073 | 5:+107913307 | MsG0580030181.01.T01:CDS |
| CAACGGGTATGTAACATTAA+AGG | 0.253456 | 5:-107914105 | None:intergenic |
| TGAAATTCCAAACAGAATTA+AGG | 0.263615 | 5:+107914298 | MsG0580030181.01.T01:CDS |
| TCACTTGAAACATCAATTAG+AGG | 0.292963 | 5:-107913515 | None:intergenic |
| CTACATTCCTTAATTCTGTT+TGG | 0.299095 | 5:-107914305 | None:intergenic |
| CGTTTAGCTATTGCTTCAAT+TGG | 0.305513 | 5:+107913599 | MsG0580030181.01.T01:CDS |
| CAGAATTCAGTCCTGCTAAA+TGG | 0.305857 | 5:-107913079 | None:intergenic |
| AAACATTTGCAGATTATATT+GGG | 0.308469 | 5:-107914499 | None:intergenic |
| AACCAAGATGTGAACTCTTT+GGG | 0.312804 | 5:+107913821 | MsG0580030181.01.T01:CDS |
| AGCTATTGACTTGAGGCATT+TGG | 0.314090 | 5:+107913925 | MsG0580030181.01.T01:CDS |
| GAAGGCCTTGCTCTTGTAAA+TGG | 0.322531 | 5:+107913125 | MsG0580030181.01.T01:CDS |
| GTCTCAGAGTCTGCAAGGGC+TGG | 0.333464 | 5:+107912350 | MsG0580030181.01.T01:CDS |
| TATCTCCCTTTCAATCGATT+TGG | 0.337613 | 5:-107913474 | None:intergenic |
| CTTGCACTTTCAACTTCCTT+TGG | 0.340425 | 5:-107914251 | None:intergenic |
| CAACCAAGATGTGAACTCTT+TGG | 0.345139 | 5:+107913820 | MsG0580030181.01.T01:CDS |
| TCACCAAGGCATTCCAGAAT+TGG | 0.348827 | 5:-107914458 | None:intergenic |
| AGAAACCCAAGTCTGGATTA+TGG | 0.349211 | 5:+107913701 | MsG0580030181.01.T01:CDS |
| TAAAGTACTTGCTTTAGTTT+CGG | 0.350006 | 5:-107914131 | None:intergenic |
| CGCGGCACAGTTACCGCTTC+CGG | 0.352856 | 5:+107912954 | MsG0580030181.01.T01:intron |
| TCAAGTGATAAGGCTCTAAA+TGG | 0.353108 | 5:+107913530 | MsG0580030181.01.T01:CDS |
| GTGAGGGAAGAACTGAAGAT+AGG | 0.353501 | 5:+107914350 | MsG0580030181.01.T01:CDS |
| TTCTGGAATGCCTTGGTGAT+TGG | 0.363836 | 5:+107914462 | MsG0580030181.01.T01:CDS |
| TAACAGTAGCTCACATGTTA+AGG | 0.382489 | 5:+107912323 | None:intergenic |
| AAAGATTGTTGATCCAATTC+TGG | 0.384374 | 5:+107914445 | MsG0580030181.01.T01:CDS |
| CCAGTGGTAACACCATAAAT+TGG | 0.386376 | 5:-107912421 | None:intergenic |
| AACGGGTATGTAACATTAAA+GGG | 0.397076 | 5:-107914104 | None:intergenic |
| CAATCGATTTGGTTGAAAAC+CGG | 0.398842 | 5:-107913463 | None:intergenic |
| GTCCACAGATTGAAGTTATC+CGG | 0.407217 | 5:+107913444 | MsG0580030181.01.T01:CDS |
| AATTTCCAAGGCACCCCAAT+TGG | 0.407679 | 5:+107913557 | MsG0580030181.01.T01:CDS |
| TATGGTGTTACCACTGGCTT+TGG | 0.409618 | 5:+107912427 | MsG0580030181.01.T01:CDS |
| ATTTAGCAGGACTGAATTCT+GGG | 0.415023 | 5:+107913081 | MsG0580030181.01.T01:CDS |
| TGCTGGTAGAAACCCAAGTC+TGG | 0.415807 | 5:+107913694 | MsG0580030181.01.T01:CDS |
| TGCTAAATGGAAAGCTTCCT+TGG | 0.419980 | 5:-107913066 | None:intergenic |
| AATTGATGTTTCAAGTGATA+AGG | 0.422344 | 5:+107913520 | MsG0580030181.01.T01:CDS |
| TGGATCTGGCGTTGCTTCTA+CGG | 0.429543 | 5:+107913157 | MsG0580030181.01.T01:CDS |
| CTCCTTCTGAAGAGCAAAGC+TGG | 0.431258 | 5:-107912474 | None:intergenic |
| AAGGAAGCTTTCCATTTAGC+AGG | 0.438602 | 5:+107913068 | MsG0580030181.01.T01:CDS |
| GCTTTAGTTTCGGCATCAAC+GGG | 0.438751 | 5:-107914121 | None:intergenic |
| TCCCTCACAAACCTGTATAG+TGG | 0.440843 | 5:-107914335 | None:intergenic |
| CTAGGCTTCTGCAATGGATC+GGG | 0.445249 | 5:-107913380 | None:intergenic |
| CTTGTAAATGGCACAGCTGT+TGG | 0.447001 | 5:+107913137 | MsG0580030181.01.T01:CDS |
| CCAATTTATGGTGTTACCAC+TGG | 0.450686 | 5:+107912421 | MsG0580030181.01.T01:CDS |
| GTTAGCAATGCAGCGATGTA+AGG | 0.454762 | 5:-107912993 | None:intergenic |
| AAACTCCAATTGGGGTGCCT+TGG | 0.458485 | 5:-107913562 | None:intergenic |
| TATCCATCGAAACTCCAATT+GGG | 0.459183 | 5:-107913571 | None:intergenic |
| TGCTTTAGTTTCGGCATCAA+CGG | 0.459822 | 5:-107914122 | None:intergenic |
| TCTCAGAGTCTGCAAGGGCT+GGG | 0.462884 | 5:+107912351 | MsG0580030181.01.T01:CDS |
| TGAGGGAAGAACTGAAGATA+GGG | 0.463683 | 5:+107914351 | MsG0580030181.01.T01:CDS |
| TACATCGCTGCATTGCTAAC+CGG | 0.464170 | 5:+107912996 | MsG0580030181.01.T01:CDS |
| ATAAGATGATGTGTAAATTC+CGG | 0.470007 | 5:-107913257 | None:intergenic |
| AGCTCTGGAATTTCGCCTAC+CGG | 0.473451 | 5:-107913015 | None:intergenic |
| TTATCCATCGAAACTCCAAT+TGG | 0.473631 | 5:-107913572 | None:intergenic |
| TCTAGGCTTCTGCAATGGAT+CGG | 0.477349 | 5:-107913381 | None:intergenic |
| TTTCAACCAAATCGATTGAA+AGG | 0.483319 | 5:+107913468 | MsG0580030181.01.T01:CDS |
| AATGGCACAGCTGTTGGATC+TGG | 0.484897 | 5:+107913143 | MsG0580030181.01.T01:CDS |
| TCAATGACTTGTATAACAAC+GGG | 0.486075 | 5:+107913654 | MsG0580030181.01.T01:CDS |
| CAAACAGAATTAAGGAATGT+AGG | 0.494853 | 5:+107914306 | MsG0580030181.01.T01:CDS |
| TTCAACCAAATCGATTGAAA+GGG | 0.496434 | 5:+107913469 | MsG0580030181.01.T01:CDS |
| TAAGGCCTCTGAAGTTGCCA+TGG | 0.497043 | 5:+107913727 | MsG0580030181.01.T01:CDS |
| TATTGACTTGAGGCATTTGG+AGG | 0.499079 | 5:+107913928 | MsG0580030181.01.T01:CDS |
| ACAAGAGCAAGGCCTTCCTT+CGG | 0.501581 | 5:-107913119 | None:intergenic |
| ATTTGCAGATTATATTGGGA+TGG | 0.503269 | 5:-107914495 | None:intergenic |
| TGAAGTCATGCAAGGGAAGC+CGG | 0.504364 | 5:+107913238 | MsG0580030181.01.T01:CDS |
| AGGGTTGCTGACAGGAGAAA+AGG | 0.505444 | 5:+107914370 | MsG0580030181.01.T01:CDS |
| ACCCCAAAGAGTTCACATCT+TGG | 0.506444 | 5:-107913823 | None:intergenic |
| ACACAAGCTGAAGTTCCATC+CGG | 0.506990 | 5:+107913280 | MsG0580030181.01.T01:CDS |
| GTAGGTCATACCCACTATAC+AGG | 0.507329 | 5:+107914324 | MsG0580030181.01.T01:CDS |
| CAAAGGAAGTTGAAAGTGCA+AGG | 0.513174 | 5:+107914252 | MsG0580030181.01.T01:CDS |
| CTACCAGCAGAAAGATTTGA+GGG | 0.514551 | 5:-107913680 | None:intergenic |
| CTGCCCTCAAATCTTTCTGC+TGG | 0.518283 | 5:+107913677 | MsG0580030181.01.T01:CDS |
| TTTGCAGATTATATTGGGAT+GGG | 0.520814 | 5:-107914494 | None:intergenic |
| AGGCGAAATTCCAGAGCTGT+TGG | 0.522740 | 5:+107913020 | MsG0580030181.01.T01:CDS |
| CACCCCAATTGGAGTTTCGA+TGG | 0.523805 | 5:+107913568 | MsG0580030181.01.T01:CDS |
| CTTTGCTCTTCAGAAGGAGA+TGG | 0.526889 | 5:+107912478 | MsG0580030181.01.T01:CDS |
| CTTTGCACATGACTTGTCAC+AGG | 0.528425 | 5:-107913785 | None:intergenic |
| CTCTTGTAACTTCTCCTCAA+TGG | 0.530704 | 5:+107913417 | MsG0580030181.01.T01:CDS |
| ATTAAAGGGATCATCTATGT+AGG | 0.532990 | 5:-107914090 | None:intergenic |
| TCTACCAGCAGAAAGATTTG+AGG | 0.533460 | 5:-107913681 | None:intergenic |
| TAAAACCATAATCCAGACTT+GGG | 0.534876 | 5:-107913706 | None:intergenic |
| TGCAAGGGTTGCATTTGAGA+AGG | 0.540341 | 5:+107914268 | MsG0580030181.01.T01:CDS |
| GTGATAAGGCTCTAAATGGT+GGG | 0.542827 | 5:+107913534 | MsG0580030181.01.T01:CDS |
| GACCAGCTTTGCTCTTCAGA+AGG | 0.545696 | 5:+107912472 | MsG0580030181.01.T01:CDS |
| CCCTCACAAACCTGTATAGT+GGG | 0.553390 | 5:-107914334 | None:intergenic |
| ATCTGTGGACCGAGCCATTG+AGG | 0.553900 | 5:-107913431 | None:intergenic |
| CTGAAGATAGGGTTGCTGAC+AGG | 0.554777 | 5:+107914362 | MsG0580030181.01.T01:CDS |
| GTAACTTCTCCTCAATGGCT+CGG | 0.557606 | 5:+107913422 | MsG0580030181.01.T01:CDS |
| GTCGAGTCTCAGAGTCTGCA+AGG | 0.559692 | 5:+107912345 | MsG0580030181.01.T01:CDS |
| AGTGATAAGGCTCTAAATGG+TGG | 0.559859 | 5:+107913533 | MsG0580030181.01.T01:CDS |
| GAGGAATAGATCACCGGAAG+CGG | 0.561428 | 5:-107912967 | None:intergenic |
| TTAAAACCATAATCCAGACT+TGG | 0.567038 | 5:-107913707 | None:intergenic |
| AGCTAGCTGCGCGTGGATCG+CGG | 0.569938 | 5:+107912378 | MsG0580030181.01.T01:CDS |
| AAAAGAGTCTCTTAATGCCA+AGG | 0.570402 | 5:+107913049 | MsG0580030181.01.T01:CDS |
| TTCGAGTTGAAGCCGAAGGA+AGG | 0.571632 | 5:+107913107 | MsG0580030181.01.T01:CDS |
| TTCAGAACAATATGCAGCCA+TGG | 0.573180 | 5:-107913744 | None:intergenic |
| CTAAATGGTGGGAATTTCCA+AGG | 0.574643 | 5:+107913545 | MsG0580030181.01.T01:CDS |
| GCAGAGTGCAACCAAATATG+TGG | 0.576865 | 5:-107913900 | None:intergenic |
| GTCAATGACTTGTATAACAA+CGG | 0.578417 | 5:+107913653 | MsG0580030181.01.T01:CDS |
| GCAAGGGTTGCATTTGAGAA+GGG | 0.582509 | 5:+107914269 | MsG0580030181.01.T01:CDS |
| GATCCAATTCTGGAATGCCT+TGG | 0.586654 | 5:+107914455 | MsG0580030181.01.T01:CDS |
| ACCAAGATGTGAACTCTTTG+GGG | 0.587468 | 5:+107913822 | MsG0580030181.01.T01:CDS |
| AATGCCTCAAGTCAATAGCT+TGG | 0.587899 | 5:-107913922 | None:intergenic |
| ACCCACTATACAGGTTTGTG+AGG | 0.588985 | 5:+107914333 | MsG0580030181.01.T01:CDS |
| GGGTTGAAGCTAGCTGCGCG+TGG | 0.594789 | 5:+107912371 | MsG0580030181.01.T01:CDS |
| CAGCCTCGATTTGACCCGGA+TGG | 0.598345 | 5:-107913295 | None:intergenic |
| TGCAGCCATGGCAACTTCAG+AGG | 0.600459 | 5:-107913732 | None:intergenic |
| CACAAGCTGAAGTTCCATCC+GGG | 0.607305 | 5:+107913281 | MsG0580030181.01.T01:CDS |
| AGGACAGAGGAATAGATCAC+CGG | 0.608200 | 5:-107912973 | None:intergenic |
| GTTCTTCGAGTTGAAGCCGA+AGG | 0.609153 | 5:+107913103 | MsG0580030181.01.T01:CDS |
| ACTGAAGTCTCTATTGCCAA+AGG | 0.615652 | 5:+107914235 | MsG0580030181.01.T01:CDS |
| AACCGGATAACTTCAATCTG+TGG | 0.620117 | 5:-107913446 | None:intergenic |
| AAAGGATGTTACACCAGATG+AGG | 0.624964 | 5:+107914388 | MsG0580030181.01.T01:CDS |
| CTGTGCCATTTACAAGAGCA+AGG | 0.628462 | 5:-107913130 | None:intergenic |
| CTGGTCAGTTCTTCTATGTG+AGG | 0.639160 | 5:-107912455 | None:intergenic |
| TCGAGTCTCAGAGTCTGCAA+GGG | 0.639413 | 5:+107912346 | MsG0580030181.01.T01:CDS |
| ATCCATCGAAACTCCAATTG+GGG | 0.640649 | 5:-107913570 | None:intergenic |
| GCAGCAGCCTCGATTTGACC+CGG | 0.643264 | 5:-107913299 | None:intergenic |
| GTTCCATCCGGGTCAAATCG+AGG | 0.649287 | 5:+107913292 | MsG0580030181.01.T01:CDS |
| TCTGCCAAGCTATTGACTTG+AGG | 0.654017 | 5:+107913918 | MsG0580030181.01.T01:CDS |
| CCCACTATACAGGTTTGTGA+GGG | 0.659277 | 5:+107914334 | MsG0580030181.01.T01:CDS |
| AAAGGAAGTTGAAAGTGCAA+GGG | 0.662059 | 5:+107914253 | MsG0580030181.01.T01:CDS |
| GAATGCCTTGGTGATTGGAA+AGG | 0.664169 | 5:+107914467 | MsG0580030181.01.T01:CDS |
| TGAGGCAGCACCAAAGCCAG+TGG | 0.666779 | 5:-107912437 | None:intergenic |
| GATTTCTGCTTTGAAAACAG+TGG | 0.668764 | 5:+107913847 | MsG0580030181.01.T01:CDS |
| TCGCTGCATTGCTAACCGGT+AGG | 0.672083 | 5:+107913000 | MsG0580030181.01.T01:CDS |
| GAGAAGTTACAAGAGCGTAA+CGG | 0.674364 | 5:-107913409 | None:intergenic |
| ATCGCGGAAAACATTGACAA+AGG | 0.691087 | 5:+107912394 | MsG0580030181.01.T01:CDS |
| ATGCAGCGATGTAAGGACAG+AGG | 0.702128 | 5:-107912986 | None:intergenic |
| GAACTCCTTTCCAATCACCA+AGG | 0.723073 | 5:-107914472 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCGTATTCTTATTATTTA+TGG | - | Chr5:107914177-107914196 | None:intergenic | 15.0% |
| !!! | CTAAAAAACTATTTCTAAAA+GGG | - | Chr5:107912548-107912567 | None:intergenic | 15.0% |
| !!! | TAATACTGATATTATTCTTT+TGG | + | Chr5:107912728-107912747 | MsG0580030181.01.T01:intron | 15.0% |
| !!! | TTTTTAAAAGTGCAATATTT+GGG | + | Chr5:107912773-107912792 | MsG0580030181.01.T01:intron | 15.0% |
| !!! | GCTAAAAAACTATTTCTAAA+AGG | - | Chr5:107912549-107912568 | None:intergenic | 20.0% |
| !!! | GTTTTTAAAAGTGCAATATT+TGG | + | Chr5:107912772-107912791 | MsG0580030181.01.T01:intron | 20.0% |
| ! | ATAAGATGATGTGTAAATTC+CGG | - | Chr5:107913260-107913279 | None:intergenic | 25.0% |
| ! | TCTTCAACATTTGAGAAAAT+TGG | + | Chr5:107914197-107914216 | MsG0580030181.01.T01:CDS | 25.0% |
| ! | TGAAATTCCAAACAGAATTA+AGG | + | Chr5:107914298-107914317 | MsG0580030181.01.T01:CDS | 25.0% |
| !! | AATTGATGTTTCAAGTGATA+AGG | + | Chr5:107913520-107913539 | MsG0580030181.01.T01:CDS | 25.0% |
| !! | ATTATGGAACACATTTTAGA+TGG | + | Chr5:107913323-107913342 | MsG0580030181.01.T01:CDS | 25.0% |
| !! | GTTAAATCATTTTCTTTCAC+AGG | + | Chr5:107912750-107912769 | MsG0580030181.01.T01:intron | 25.0% |
| !! | TAAAGTACTTGCTTTAGTTT+CGG | - | Chr5:107914134-107914153 | None:intergenic | 25.0% |
| AAAGATTGTTGATCCAATTC+TGG | + | Chr5:107914445-107914464 | MsG0580030181.01.T01:CDS | 30.0% | |
| AACGGGTATGTAACATTAAA+GGG | - | Chr5:107914107-107914126 | None:intergenic | 30.0% | |
| ATTAAAGGGATCATCTATGT+AGG | - | Chr5:107914093-107914112 | None:intergenic | 30.0% | |
| CAAAAAAGTTAATCTCAGCA+AGG | + | Chr5:107912631-107912650 | MsG0580030181.01.T01:intron | 30.0% | |
| CAAACAGAATTAAGGAATGT+AGG | + | Chr5:107914306-107914325 | MsG0580030181.01.T01:CDS | 30.0% | |
| CTACATTCCTTAATTCTGTT+TGG | - | Chr5:107914308-107914327 | None:intergenic | 30.0% | |
| TAAAACCATAATCCAGACTT+GGG | - | Chr5:107913709-107913728 | None:intergenic | 30.0% | |
| TAATCCATTTAGATTCTGTG+AGG | + | Chr5:107914028-107914047 | MsG0580030181.01.T01:intron | 30.0% | |
| TCACTTGAAACATCAATTAG+AGG | - | Chr5:107913518-107913537 | None:intergenic | 30.0% | |
| TTAAAACCATAATCCAGACT+TGG | - | Chr5:107913710-107913729 | None:intergenic | 30.0% | |
| TTCAACCAAATCGATTGAAA+GGG | + | Chr5:107913469-107913488 | MsG0580030181.01.T01:CDS | 30.0% | |
| TTTCAACCAAATCGATTGAA+AGG | + | Chr5:107913468-107913487 | MsG0580030181.01.T01:CDS | 30.0% | |
| ! | GTCAATGACTTGTATAACAA+CGG | + | Chr5:107913653-107913672 | MsG0580030181.01.T01:CDS | 30.0% |
| ! | TACTGTAAGCAGAGTTTTTA+AGG | + | Chr5:107913975-107913994 | MsG0580030181.01.T01:intron | 30.0% |
| ! | TCAATGACTTGTATAACAAC+GGG | + | Chr5:107913654-107913673 | MsG0580030181.01.T01:CDS | 30.0% |
| ! | TTTTCCTCACAGAATCTAAA+TGG | - | Chr5:107914035-107914054 | None:intergenic | 30.0% |
| !! | AAGTCTGGATTATGGTTTTA+AGG | + | Chr5:107913709-107913728 | MsG0580030181.01.T01:CDS | 30.0% |
| !!! | ACTTTTTCAAATTCCTCATC+TGG | - | Chr5:107914404-107914423 | None:intergenic | 30.0% |
| AAAAGAGTCTCTTAATGCCA+AGG | + | Chr5:107913049-107913068 | MsG0580030181.01.T01:CDS | 35.0% | |
| AACCAAGATGTGAACTCTTT+GGG | + | Chr5:107913821-107913840 | MsG0580030181.01.T01:CDS | 35.0% | |
| ATACTTCTACAAGGCTATTC+AGG | + | Chr5:107912863-107912882 | MsG0580030181.01.T01:intron | 35.0% | |
| ATTTAGCAGGACTGAATTCT+GGG | + | Chr5:107913081-107913100 | MsG0580030181.01.T01:CDS | 35.0% | |
| CAACGGGTATGTAACATTAA+AGG | - | Chr5:107914108-107914127 | None:intergenic | 35.0% | |
| CGTTTAGCTATTGCTTCAAT+TGG | + | Chr5:107913599-107913618 | MsG0580030181.01.T01:CDS | 35.0% | |
| GACATTATGTTGAGAGTTGT+GGG | - | Chr5:107912917-107912936 | None:intergenic | 35.0% | |
| TATCCATCGAAACTCCAATT+GGG | - | Chr5:107913574-107913593 | None:intergenic | 35.0% | |
| TATCTCCCTTTCAATCGATT+TGG | - | Chr5:107913477-107913496 | None:intergenic | 35.0% | |
| TCAGGGTTAATACTTCTACA+AGG | + | Chr5:107912854-107912873 | MsG0580030181.01.T01:intron | 35.0% | |
| TGACATTATGTTGAGAGTTG+TGG | - | Chr5:107912918-107912937 | None:intergenic | 35.0% | |
| TTATCCATCGAAACTCCAAT+TGG | - | Chr5:107913575-107913594 | None:intergenic | 35.0% | |
| ! | AAAGGAAGTTGAAAGTGCAA+GGG | + | Chr5:107914253-107914272 | MsG0580030181.01.T01:CDS | 35.0% |
| ! | GCATTAAGAGACTCTTTTGA+GGG | - | Chr5:107913047-107913066 | None:intergenic | 35.0% |
| ! | TGAGAAAATTGGAGCTTTTG+AGG | + | Chr5:107914208-107914227 | MsG0580030181.01.T01:CDS | 35.0% |
| ! | TGAGGAAAATTTGCTCAAAG+TGG | + | Chr5:107914046-107914065 | MsG0580030181.01.T01:intron | 35.0% |
| ! | TTTTCACTGAAGTCATGCAA+GGG | + | Chr5:107913231-107913250 | MsG0580030181.01.T01:CDS | 35.0% |
| !! | CAATCGATTTGGTTGAAAAC+CGG | - | Chr5:107913466-107913485 | None:intergenic | 35.0% |
| !! | GACAAAGGTACTCCAATTTA+TGG | + | Chr5:107912409-107912428 | MsG0580030181.01.T01:CDS | 35.0% |
| !! | GATTTCTGCTTTGAAAACAG+TGG | + | Chr5:107913847-107913866 | MsG0580030181.01.T01:CDS | 35.0% |
| !! | TCAAGTGATAAGGCTCTAAA+TGG | + | Chr5:107913530-107913549 | MsG0580030181.01.T01:CDS | 35.0% |
| AAAGGATGTTACACCAGATG+AGG | + | Chr5:107914388-107914407 | MsG0580030181.01.T01:CDS | 40.0% | |
| AACCGGATAACTTCAATCTG+TGG | - | Chr5:107913449-107913468 | None:intergenic | 40.0% | |
| AAGGAAGCTTTCCATTTAGC+AGG | + | Chr5:107913068-107913087 | MsG0580030181.01.T01:CDS | 40.0% | |
| AATGCCTCAAGTCAATAGCT+TGG | - | Chr5:107913925-107913944 | None:intergenic | 40.0% | |
| ACCAAGATGTGAACTCTTTG+GGG | + | Chr5:107913822-107913841 | MsG0580030181.01.T01:CDS | 40.0% | |
| ACTGAAGTCTCTATTGCCAA+AGG | + | Chr5:107914235-107914254 | MsG0580030181.01.T01:CDS | 40.0% | |
| AGAAACCCAAGTCTGGATTA+TGG | + | Chr5:107913701-107913720 | MsG0580030181.01.T01:CDS | 40.0% | |
| ATCCATCGAAACTCCAATTG+GGG | - | Chr5:107913573-107913592 | None:intergenic | 40.0% | |
| ATCGCGGAAAACATTGACAA+AGG | + | Chr5:107912394-107912413 | MsG0580030181.01.T01:CDS | 40.0% | |
| CAACCAAGATGTGAACTCTT+TGG | + | Chr5:107913820-107913839 | MsG0580030181.01.T01:CDS | 40.0% | |
| CAGAATTCAGTCCTGCTAAA+TGG | - | Chr5:107913082-107913101 | None:intergenic | 40.0% | |
| CATTTAGCAGGACTGAATTC+TGG | + | Chr5:107913080-107913099 | MsG0580030181.01.T01:CDS | 40.0% | |
| CCAGTGGTAACACCATAAAT+TGG | - | Chr5:107912424-107912443 | None:intergenic | 40.0% | |
| CTACCAGCAGAAAGATTTGA+GGG | - | Chr5:107913683-107913702 | None:intergenic | 40.0% | |
| CTCTTGTAACTTCTCCTCAA+TGG | + | Chr5:107913417-107913436 | MsG0580030181.01.T01:CDS | 40.0% | |
| CTTGCACTTTCAACTTCCTT+TGG | - | Chr5:107914254-107914273 | None:intergenic | 40.0% | |
| GTCCACAGATTGAAGTTATC+CGG | + | Chr5:107913444-107913463 | MsG0580030181.01.T01:CDS | 40.0% | |
| TCTACCAGCAGAAAGATTTG+AGG | - | Chr5:107913684-107913703 | None:intergenic | 40.0% | |
| TGAGGGAAGAACTGAAGATA+GGG | + | Chr5:107914351-107914370 | MsG0580030181.01.T01:CDS | 40.0% | |
| TGCTAAATGGAAAGCTTCCT+TGG | - | Chr5:107913069-107913088 | None:intergenic | 40.0% | |
| TTCAGAACAATATGCAGCCA+TGG | - | Chr5:107913747-107913766 | None:intergenic | 40.0% | |
| ! | CAAAGGAAGTTGAAAGTGCA+AGG | + | Chr5:107914252-107914271 | MsG0580030181.01.T01:CDS | 40.0% |
| ! | CTAAATGGTGGGAATTTCCA+AGG | + | Chr5:107913545-107913564 | MsG0580030181.01.T01:CDS | 40.0% |
| ! | GAGAAGTTACAAGAGCGTAA+CGG | - | Chr5:107913412-107913431 | None:intergenic | 40.0% |
| ! | GGCATTAAGAGACTCTTTTG+AGG | - | Chr5:107913048-107913067 | None:intergenic | 40.0% |
| ! | GTTTTCACTGAAGTCATGCA+AGG | + | Chr5:107913230-107913249 | MsG0580030181.01.T01:CDS | 40.0% |
| ! | TCTTTTCTAGGCTTCTGCAA+TGG | - | Chr5:107913389-107913408 | None:intergenic | 40.0% |
| ! | TGCTTTAGTTTCGGCATCAA+CGG | - | Chr5:107914125-107914144 | None:intergenic | 40.0% |
| !! | AGCTATTGACTTGAGGCATT+TGG | + | Chr5:107913925-107913944 | MsG0580030181.01.T01:CDS | 40.0% |
| !! | AGTGATAAGGCTCTAAATGG+TGG | + | Chr5:107913533-107913552 | MsG0580030181.01.T01:CDS | 40.0% |
| !! | CCAATTTATGGTGTTACCAC+TGG | + | Chr5:107912421-107912440 | MsG0580030181.01.T01:CDS | 40.0% |
| !! | GTGATAAGGCTCTAAATGGT+GGG | + | Chr5:107913534-107913553 | MsG0580030181.01.T01:CDS | 40.0% |
| !! | TATTGACTTGAGGCATTTGG+AGG | + | Chr5:107913928-107913947 | MsG0580030181.01.T01:CDS | 40.0% |
| AAGAGCAGCTATGCTTGTCA+GGG | + | Chr5:107912837-107912856 | MsG0580030181.01.T01:intron | 45.0% | |
| AATCGAGGCTGCTGCTATTA+TGG | + | Chr5:107913307-107913326 | MsG0580030181.01.T01:CDS | 45.0% | |
| ACACAAGCTGAAGTTCCATC+CGG | + | Chr5:107913280-107913299 | MsG0580030181.01.T01:CDS | 45.0% | |
| ACCCACTATACAGGTTTGTG+AGG | + | Chr5:107914333-107914352 | MsG0580030181.01.T01:CDS | 45.0% | |
| ACCCCAAAGAGTTCACATCT+TGG | - | Chr5:107913826-107913845 | None:intergenic | 45.0% | |
| AGGACAGAGGAATAGATCAC+CGG | - | Chr5:107912976-107912995 | None:intergenic | 45.0% | |
| CACACAATCTTGCCATTACG+CGG | + | Chr5:107912936-107912955 | MsG0580030181.01.T01:intron | 45.0% | |
| CAGAAGGAGATGGTTAGGTA+AGG | + | Chr5:107912488-107912507 | MsG0580030181.01.T01:intron | 45.0% | |
| CCCACTATACAGGTTTGTGA+GGG | + | Chr5:107914334-107914353 | MsG0580030181.01.T01:CDS | 45.0% | |
| CCCTCACAAACCTGTATAGT+GGG | - | Chr5:107914337-107914356 | None:intergenic | 45.0% | |
| CTCTTCAGAAGGAGATGGTT+AGG | + | Chr5:107912483-107912502 | MsG0580030181.01.T01:intron | 45.0% | |
| CTGGTCAGTTCTTCTATGTG+AGG | - | Chr5:107912458-107912477 | None:intergenic | 45.0% | |
| CTTGTAAATGGCACAGCTGT+TGG | + | Chr5:107913137-107913156 | MsG0580030181.01.T01:CDS | 45.0% | |
| CTTTGCTCTTCAGAAGGAGA+TGG | + | Chr5:107912478-107912497 | MsG0580030181.01.T01:CDS | 45.0% | |
| GAACTCCTTTCCAATCACCA+AGG | - | Chr5:107914475-107914494 | None:intergenic | 45.0% | |
| GAAGGCCTTGCTCTTGTAAA+TGG | + | Chr5:107913125-107913144 | MsG0580030181.01.T01:CDS | 45.0% | |
| GCAAGGGTTGCATTTGAGAA+GGG | + | Chr5:107914269-107914288 | MsG0580030181.01.T01:CDS | 45.0% | |
| GCAGAGTGCAACCAAATATG+TGG | - | Chr5:107913903-107913922 | None:intergenic | 45.0% | |
| GCTCATGTCGTCCACATATT+TGG | + | Chr5:107913889-107913908 | MsG0580030181.01.T01:CDS | 45.0% | |
| GTAACTTCTCCTCAATGGCT+CGG | + | Chr5:107913422-107913441 | MsG0580030181.01.T01:CDS | 45.0% | |
| GTAGGTCATACCCACTATAC+AGG | + | Chr5:107914324-107914343 | MsG0580030181.01.T01:CDS | 45.0% | |
| GTGAGGGAAGAACTGAAGAT+AGG | + | Chr5:107914350-107914369 | MsG0580030181.01.T01:CDS | 45.0% | |
| GTTAGCAATGCAGCGATGTA+AGG | - | Chr5:107912996-107913015 | None:intergenic | 45.0% | |
| TACATCGCTGCATTGCTAAC+CGG | + | Chr5:107912996-107913015 | MsG0580030181.01.T01:CDS | 45.0% | |
| TCCCTCACAAACCTGTATAG+TGG | - | Chr5:107914338-107914357 | None:intergenic | 45.0% | |
| TCTAGGCTTCTGCAATGGAT+CGG | - | Chr5:107913384-107913403 | None:intergenic | 45.0% | |
| TGCAAGGGTTGCATTTGAGA+AGG | + | Chr5:107914268-107914287 | MsG0580030181.01.T01:CDS | 45.0% | |
| ! | AATTTCCAAGGCACCCCAAT+TGG | + | Chr5:107913557-107913576 | MsG0580030181.01.T01:CDS | 45.0% |
| ! | AGAGCGTAACGGTCTTTTCT+AGG | - | Chr5:107913401-107913420 | None:intergenic | 45.0% |
| ! | CTTTGCACATGACTTGTCAC+AGG | - | Chr5:107913788-107913807 | None:intergenic | 45.0% |
| ! | GAATGCCTTGGTGATTGGAA+AGG | + | Chr5:107914467-107914486 | MsG0580030181.01.T01:CDS | 45.0% |
| ! | GCTTTAGTTTCGGCATCAAC+GGG | - | Chr5:107914124-107914143 | None:intergenic | 45.0% |
| ! | TCACCAAGGCATTCCAGAAT+TGG | - | Chr5:107914461-107914480 | None:intergenic | 45.0% |
| ! | TGCTTCTACGGTTCTTTTCG+AGG | + | Chr5:107913169-107913188 | MsG0580030181.01.T01:CDS | 45.0% |
| !! | CTGTGCCATTTACAAGAGCA+AGG | - | Chr5:107913133-107913152 | None:intergenic | 45.0% |
| !! | GATCCAATTCTGGAATGCCT+TGG | + | Chr5:107914455-107914474 | MsG0580030181.01.T01:CDS | 45.0% |
| !! | TATGGTGTTACCACTGGCTT+TGG | + | Chr5:107912427-107912446 | MsG0580030181.01.T01:CDS | 45.0% |
| !! | TCTGCCAAGCTATTGACTTG+AGG | + | Chr5:107913918-107913937 | MsG0580030181.01.T01:CDS | 45.0% |
| !! | TTCTGGAATGCCTTGGTGAT+TGG | + | Chr5:107914462-107914481 | MsG0580030181.01.T01:CDS | 45.0% |
| AATGGCACAGCTGTTGGATC+TGG | + | Chr5:107913143-107913162 | MsG0580030181.01.T01:CDS | 50.0% | |
| ACAAGAGCAAGGCCTTCCTT+CGG | - | Chr5:107913122-107913141 | None:intergenic | 50.0% | |
| AGGCGAAATTCCAGAGCTGT+TGG | + | Chr5:107913020-107913039 | MsG0580030181.01.T01:CDS | 50.0% | |
| AGGGTTGCTGACAGGAGAAA+AGG | + | Chr5:107914370-107914389 | MsG0580030181.01.T01:CDS | 50.0% | |
| ATGCAGCGATGTAAGGACAG+AGG | - | Chr5:107912989-107913008 | None:intergenic | 50.0% | |
| CAAGAGCAGCTATGCTTGTC+AGG | + | Chr5:107912836-107912855 | MsG0580030181.01.T01:intron | 50.0% | |
| CACAAGCTGAAGTTCCATCC+GGG | + | Chr5:107913281-107913300 | MsG0580030181.01.T01:CDS | 50.0% | |
| CACCCCAATTGGAGTTTCGA+TGG | + | Chr5:107913568-107913587 | MsG0580030181.01.T01:CDS | 50.0% | |
| CTAGGCTTCTGCAATGGATC+GGG | - | Chr5:107913383-107913402 | None:intergenic | 50.0% | |
| CTGAAGATAGGGTTGCTGAC+AGG | + | Chr5:107914362-107914381 | MsG0580030181.01.T01:CDS | 50.0% | |
| CTGCCCTCAAATCTTTCTGC+TGG | + | Chr5:107913677-107913696 | MsG0580030181.01.T01:CDS | 50.0% | |
| GACCAGCTTTGCTCTTCAGA+AGG | + | Chr5:107912472-107912491 | MsG0580030181.01.T01:CDS | 50.0% | |
| GAGGAATAGATCACCGGAAG+CGG | - | Chr5:107912970-107912989 | None:intergenic | 50.0% | |
| TCGAGTCTCAGAGTCTGCAA+GGG | + | Chr5:107912346-107912365 | MsG0580030181.01.T01:CDS | 50.0% | |
| TGAAGTCATGCAAGGGAAGC+CGG | + | Chr5:107913238-107913257 | MsG0580030181.01.T01:CDS | 50.0% | |
| TGCTGGTAGAAACCCAAGTC+TGG | + | Chr5:107913694-107913713 | MsG0580030181.01.T01:CDS | 50.0% | |
| TGGATCTGGCGTTGCTTCTA+CGG | + | Chr5:107913157-107913176 | MsG0580030181.01.T01:CDS | 50.0% | |
| ! | AAACTCCAATTGGGGTGCCT+TGG | - | Chr5:107913565-107913584 | None:intergenic | 50.0% |
| ! | CTCCTTCTGAAGAGCAAAGC+TGG | - | Chr5:107912477-107912496 | None:intergenic | 50.0% |
| !! | AGCTCTGGAATTTCGCCTAC+CGG | - | Chr5:107913018-107913037 | None:intergenic | 50.0% |
| !! | GTTCTTCGAGTTGAAGCCGA+AGG | + | Chr5:107913103-107913122 | MsG0580030181.01.T01:CDS | 50.0% |
| !! | TAAGGCCTCTGAAGTTGCCA+TGG | + | Chr5:107913727-107913746 | MsG0580030181.01.T01:CDS | 50.0% |
| !! | TTCGAGTTGAAGCCGAAGGA+AGG | + | Chr5:107913107-107913126 | MsG0580030181.01.T01:CDS | 50.0% |
| !! | TTTTGAGGGTCCAACAGCTC+TGG | - | Chr5:107913033-107913052 | None:intergenic | 50.0% |
| ATCTGTGGACCGAGCCATTG+AGG | - | Chr5:107913434-107913453 | None:intergenic | 55.0% | |
| GCTGCTCTTGTTGCTGACGA+AGG | - | Chr5:107912826-107912845 | None:intergenic | 55.0% | |
| GTCGAGTCTCAGAGTCTGCA+AGG | + | Chr5:107912345-107912364 | MsG0580030181.01.T01:CDS | 55.0% | |
| GTTCCATCCGGGTCAAATCG+AGG | + | Chr5:107913292-107913311 | MsG0580030181.01.T01:CDS | 55.0% | |
| TCGCTGCATTGCTAACCGGT+AGG | + | Chr5:107913000-107913019 | MsG0580030181.01.T01:CDS | 55.0% | |
| TCTCAGAGTCTGCAAGGGCT+GGG | + | Chr5:107912351-107912370 | MsG0580030181.01.T01:CDS | 55.0% | |
| TGCAGCCATGGCAACTTCAG+AGG | - | Chr5:107913735-107913754 | None:intergenic | 55.0% | |
| GCGGTAACTGTGCCGCGTAA+TGG | - | Chr5:107912951-107912970 | None:intergenic | 60.0% | |
| GTCTCAGAGTCTGCAAGGGC+TGG | + | Chr5:107912350-107912369 | MsG0580030181.01.T01:CDS | 60.0% | |
| TGAGGCAGCACCAAAGCCAG+TGG | - | Chr5:107912440-107912459 | None:intergenic | 60.0% | |
| ! | CAGCCTCGATTTGACCCGGA+TGG | - | Chr5:107913298-107913317 | None:intergenic | 60.0% |
| ! | GCAGCAGCCTCGATTTGACC+CGG | - | Chr5:107913302-107913321 | None:intergenic | 60.0% |
| AGCTAGCTGCGCGTGGATCG+CGG | + | Chr5:107912378-107912397 | MsG0580030181.01.T01:CDS | 65.0% | |
| CGCGGCACAGTTACCGCTTC+CGG | + | Chr5:107912954-107912973 | MsG0580030181.01.T01:intron | 65.0% | |
| GGGTTGAAGCTAGCTGCGCG+TGG | + | Chr5:107912371-107912390 | MsG0580030181.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 107912337 | 107914508 | 107912337 | ID=MsG0580030181.01;Name=MsG0580030181.01 |
| Chr5 | mRNA | 107912337 | 107914508 | 107912337 | ID=MsG0580030181.01.T01;Parent=MsG0580030181.01;Name=MsG0580030181.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|536 |
| Chr5 | exon | 107912337 | 107912499 | 107912337 | ID=MsG0580030181.01.T01:exon:15165;Parent=MsG0580030181.01.T01 |
| Chr5 | exon | 107912964 | 107913978 | 107912964 | ID=MsG0580030181.01.T01:exon:15166;Parent=MsG0580030181.01.T01 |
| Chr5 | exon | 107914076 | 107914508 | 107914076 | ID=MsG0580030181.01.T01:exon:15167;Parent=MsG0580030181.01.T01 |
| Chr5 | CDS | 107912337 | 107912499 | 107912337 | ID=MsG0580030181.01.T01:cds;Parent=MsG0580030181.01.T01 |
| Chr5 | CDS | 107912964 | 107913978 | 107912964 | ID=MsG0580030181.01.T01:cds;Parent=MsG0580030181.01.T01 |
| Chr5 | CDS | 107914076 | 107914508 | 107914076 | ID=MsG0580030181.01.T01:cds;Parent=MsG0580030181.01.T01 |
| Gene Sequence |
| Protein sequence |
