AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013278.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013278.01.T01 MTR_3g437870 66.857 350 27 4 64 348 84 409 8.49e-147 447
MsG0380013278.01.T01 MTR_3g437870 56.364 330 100 6 287 572 482 811 7.04e-98 319
MsG0380013278.01.T01 MTR_3g437870 88.136 59 7 0 341 399 472 530 5.35e-26 113
MsG0380013278.01.T01 MTR_4g108210 62.455 277 49 4 346 572 136 407 2.09e-105 328
MsG0380013278.01.T01 MTR_4g108210 82.090 67 12 0 280 346 1 67 2.69e-30 125
MsG0380013278.01.T01 MTR_4g108240 49.153 354 122 9 38 348 66 404 7.31e-96 309
MsG0380013278.01.T01 MTR_4g108240 55.882 136 22 2 397 494 593 728 1.39e-34 139
MsG0380013278.01.T01 MTR_4g108240 69.492 59 18 0 341 399 467 525 2.83e-18 89.4
MsG0380013278.01.T01 MTR_4g108240 49.153 354 122 9 38 348 66 404 2.49e-95 309
MsG0380013278.01.T01 MTR_4g108240 67.568 222 34 2 397 580 593 814 1.80e-87 288
MsG0380013278.01.T01 MTR_4g108240 69.492 59 18 0 341 399 467 525 3.22e-18 89.0
MsG0380013278.01.T01 MTR_4g108240 49.153 354 122 9 38 348 66 404 8.80e-95 310
MsG0380013278.01.T01 MTR_4g108240 68.224 214 30 2 397 572 593 806 1.88e-84 283
MsG0380013278.01.T01 MTR_4g108240 69.492 59 18 0 341 399 467 525 2.81e-18 89.4
MsG0380013278.01.T01 MTR_4g108170 69.159 214 28 2 397 572 578 791 9.55e-87 288
MsG0380013278.01.T01 MTR_4g108170 53.261 276 81 5 96 348 139 389 1.20e-80 272
MsG0380013278.01.T01 MTR_4g108170 54.430 79 28 3 328 399 434 511 3.63e-16 82.8
MsG0380013278.01.T01 MTR_4g108163 67.290 214 32 2 397 572 581 794 7.16e-83 278
MsG0380013278.01.T01 MTR_4g108163 44.110 365 110 10 38 347 66 391 5.21e-81 273
MsG0380013278.01.T01 MTR_4g108163 64.407 59 21 0 341 399 455 513 3.19e-17 86.3
MsG0380013278.01.T01 MTR_4g108153 65.888 214 35 2 397 572 551 764 1.17e-81 274
MsG0380013278.01.T01 MTR_4g108153 42.204 372 129 8 29 348 25 362 1.02e-77 263
MsG0380013278.01.T01 MTR_4g108153 64.407 59 21 0 341 399 425 483 3.66e-15 79.3
MsG0380013278.01.T01 MTR_3g437990 44.521 146 76 3 430 572 575 718 7.32e-31 129
MsG0380013278.01.T01 MTR_3g099990 43.151 146 78 3 430 572 575 718 2.63e-29 124
MsG0380013278.01.T01 MTR_7g091380 40.541 148 82 3 429 572 1508 1653 8.62e-25 110
MsG0380013278.01.T01 MTR_7g091380 39.865 148 80 3 429 572 602 744 1.36e-21 100
MsG0380013278.01.T01 MTR_7g091380 40.541 148 82 3 429 572 1326 1471 9.07e-25 110
MsG0380013278.01.T01 MTR_7g091380 39.865 148 80 3 429 572 420 562 1.45e-21 100
MsG0380013278.01.T01 MTR_7g091380 40.541 148 82 3 429 572 1306 1451 9.20e-25 110
MsG0380013278.01.T01 MTR_7g091380 39.865 148 80 3 429 572 400 542 1.48e-21 100
MsG0380013278.01.T01 MTR_7g091380 40.541 148 82 3 429 572 1508 1653 9.60e-25 110
MsG0380013278.01.T01 MTR_7g091380 39.865 148 80 3 429 572 602 744 1.55e-21 100
MsG0380013278.01.T01 MTR_8g464090 66.038 53 18 0 242 294 128 180 4.23e-18 83.2
MsG0380013278.01.T01 MTR_7g091670 78.723 47 10 0 2 48 30 76 1.48e-17 79.7
MsG0380013278.01.T01 MTR_7g060475 70.833 48 14 0 1 48 54 101 1.75e-16 78.2
MsG0380013278.01.T01 MTR_3g116670 74.468 47 12 0 2 48 73 119 2.88e-16 76.3
MsG0380013278.01.T01 MTR_6g016695 77.500 40 9 0 2 41 40 79 1.35e-14 69.7
MsG0380013278.01.T01 MTR_7g070905 80.000 40 8 0 2 41 12 51 1.44e-14 69.7
MsG0380013278.01.T01 MTR_2g436990 85.000 40 6 0 2 41 244 283 1.48e-14 75.9
MsG0380013278.01.T01 MTR_8g040390 67.347 49 16 0 2 50 94 142 3.13e-14 70.5
MsG0380013278.01.T01 MTR_0048s0210 70.213 47 14 0 2 48 15 61 9.80e-14 68.9
MsG0380013278.01.T01 MTR_0048s0210 76.923 39 9 0 2 40 93 131 1.11e-13 68.6
MsG0380013278.01.T01 MTR_5g023580 84.211 38 6 0 4 41 287 324 1.21e-13 73.2
MsG0380013278.01.T01 MTR_1g060110 79.487 39 8 0 3 41 10 48 2.09e-13 66.2
MsG0380013278.01.T01 MTR_6g074890 77.500 40 9 0 2 41 63 102 2.12e-13 68.6
MsG0380013278.01.T01 MTR_6g033730 68.182 44 14 0 5 48 66 109 5.82e-13 66.6
MsG0380013278.01.T01 MTR_5g059000 79.487 39 8 0 3 41 37 75 7.13e-13 65.5
MsG0380013278.01.T01 MTR_7g071670 65.957 47 16 0 2 48 74 120 1.01e-12 67.0
MsG0380013278.01.T01 MTR_2g086380 71.795 39 11 0 2 40 44 82 1.29e-12 64.3
MsG0380013278.01.T01 MTR_4g129250 74.359 39 10 0 2 40 40 78 1.29e-12 63.9
MsG0380013278.01.T01 MTR_3g014560 76.316 38 9 0 11 48 3 40 1.56e-12 65.9
MsG0380013278.01.T01 MTR_1g108730 52.941 68 24 1 1 68 41 100 2.06e-12 65.9
MsG0380013278.01.T01 MTR_8g097110 62.500 48 18 0 2 49 19 66 2.55e-12 63.2
MsG0380013278.01.T01 MTR_7g010130 76.923 39 9 0 2 40 40 78 5.54e-11 59.7
MsG0380013278.01.T01 MTR_5g060880 77.778 36 8 0 6 41 329 364 8.69e-11 64.7
MsG0380013278.01.T01 MTR_5g460870 70.000 40 12 0 2 41 181 220 9.79e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013278.01.T01 AT3G47790 45.646 333 102 6 67 348 83 387 3.37e-81 271
MsG0380013278.01.T01 AT3G47790 61.574 216 45 2 398 575 568 783 4.32e-75 254
MsG0380013278.01.T01 AT3G47790 38.136 118 59 2 283 400 403 506 6.68e-15 78.6
MsG0380013278.01.T01 AT3G47790 45.646 333 102 6 67 348 83 387 6.57e-81 272
MsG0380013278.01.T01 AT3G47790 61.502 213 44 2 398 572 568 780 1.00e-73 253
MsG0380013278.01.T01 AT3G47790 38.136 118 59 2 283 400 403 506 5.79e-15 79.0
MsG0380013278.01.T01 AT3G47760 40.885 384 99 8 113 394 170 527 1.44e-79 269
MsG0380013278.01.T01 AT3G47760 62.264 212 42 2 399 572 597 808 1.24e-71 248
MsG0380013278.01.T01 AT5G61740 63.470 219 42 2 392 572 424 642 2.16e-78 263
MsG0380013278.01.T01 AT5G61740 49.174 242 110 5 113 348 19 253 1.44e-59 212
MsG0380013278.01.T01 AT3G47780 65.094 212 36 2 399 572 596 807 3.74e-78 265
MsG0380013278.01.T01 AT3G47780 44.089 313 115 4 65 348 129 410 7.76e-72 248
MsG0380013278.01.T01 AT3G47780 63.043 46 17 0 349 394 481 526 2.53e-12 70.5
MsG0380013278.01.T01 AT5G61740 63.470 219 42 2 392 572 529 747 1.59e-77 263
MsG0380013278.01.T01 AT5G61740 49.174 242 110 5 113 348 124 358 3.64e-59 212
MsG0380013278.01.T01 AT5G61740 63.470 219 42 2 392 572 563 781 2.76e-77 263
MsG0380013278.01.T01 AT5G61740 49.174 242 110 5 113 348 158 392 3.61e-59 212
MsG0380013278.01.T01 AT3G47740 64.019 214 39 2 397 572 591 804 3.66e-77 263
MsG0380013278.01.T01 AT3G47740 34.205 459 145 9 67 394 94 526 4.36e-64 226
MsG0380013278.01.T01 AT3G47760 41.067 375 93 8 122 394 145 493 4.65e-77 262
MsG0380013278.01.T01 AT3G47760 59.813 214 48 2 397 572 555 768 9.62e-70 242
MsG0380013278.01.T01 AT3G47790 61.574 216 45 2 398 575 449 664 2.32e-76 255
MsG0380013278.01.T01 AT3G47790 51.321 265 76 3 113 348 28 268 9.84e-76 254
MsG0380013278.01.T01 AT3G47790 38.136 118 59 2 283 400 284 387 7.34e-15 78.2
MsG0380013278.01.T01 AT5G61700 60.538 223 50 2 392 576 571 793 7.88e-75 254
MsG0380013278.01.T01 AT5G61700 38.920 352 117 8 65 348 74 395 3.92e-60 214
MsG0380013278.01.T01 AT5G61700 60.538 223 50 2 392 576 571 793 7.88e-75 254
MsG0380013278.01.T01 AT5G61700 38.920 352 117 8 65 348 74 395 3.92e-60 214
MsG0380013278.01.T01 AT3G47770 39.687 383 104 7 113 394 167 523 2.85e-74 250
MsG0380013278.01.T01 AT5G61700 60.731 219 48 2 392 572 571 789 1.22e-73 253
MsG0380013278.01.T01 AT5G61700 38.920 352 117 8 65 348 74 395 4.93e-60 215
MsG0380013278.01.T01 AT3G47770 40.584 377 116 7 118 394 129 497 2.29e-73 252
MsG0380013278.01.T01 AT3G47770 60.748 214 46 2 397 572 565 778 3.41e-72 248
MsG0380013278.01.T01 AT3G47770 39.687 383 104 7 113 394 167 523 5.63e-73 251
MsG0380013278.01.T01 AT3G47770 60.748 214 46 2 397 572 591 804 3.14e-72 249
MsG0380013278.01.T01 AT3G47760 41.389 360 107 8 113 394 170 503 1.93e-72 249
MsG0380013278.01.T01 AT3G47760 59.813 214 48 2 397 572 565 778 9.57e-70 242
MsG0380013278.01.T01 AT3G47750 60.748 214 46 2 397 572 596 809 6.11e-71 246
MsG0380013278.01.T01 AT3G47750 36.554 383 118 6 113 394 170 528 1.11e-67 236
MsG0380013278.01.T01 AT5G61700 38.920 352 117 8 65 348 74 395 5.66e-60 212
MsG0380013278.01.T01 AT5G61700 48.227 141 35 2 392 494 571 711 2.41e-28 120
MsG0380013278.01.T01 AT3G47730 45.890 146 74 3 430 572 577 720 9.88e-32 131
MsG0380013278.01.T01 AT5G61730 44.521 146 76 3 430 572 569 712 3.60e-30 126
MsG0380013278.01.T01 AT5G61730 44.521 146 76 3 430 572 579 722 3.98e-30 126
MsG0380013278.01.T01 AT5G61690 41.781 146 80 3 430 572 578 721 1.06e-29 125
MsG0380013278.01.T01 AT5G61690 40.411 146 81 4 430 572 578 720 1.98e-27 118
MsG0380013278.01.T01 AT2G41700 40.541 148 82 3 429 572 1461 1606 2.06e-24 109
MsG0380013278.01.T01 AT2G41700 39.865 148 80 3 429 572 527 669 4.24e-22 102
MsG0380013278.01.T01 AT2G41700 40.541 148 82 3 429 572 1503 1648 2.56e-24 108
MsG0380013278.01.T01 AT2G41700 39.865 148 80 3 429 572 597 739 5.35e-22 101

Find 135 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAACTCAAACAACATTT+TGG 0.176370 3:-34213914 None:intergenic
CTGACTTTGTAGATAGTAAA+TGG 0.216674 3:-34213079 None:intergenic
AGAAGCCACGTCAAACTTTA+AGG 0.233221 3:-34213962 None:intergenic
TTCATATAACCCACGATATA+AGG 0.236932 3:-34215062 None:intergenic
GATTCCTCGTTCTGTAAATT+TGG 0.239265 3:+34213649 MsG0380013278.01.T01:CDS
CAGCAACCCCTCCATGAAAA+AGG 0.279146 3:-34216624 None:intergenic
TAAGATGTGCTCAGGCTTTA+CGG 0.303141 3:+34213354 MsG0380013278.01.T01:CDS
ATTTGTGCTGTGTATATTGC+TGG 0.315221 3:+34211611 MsG0380013278.01.T01:CDS
GTGCTCAGGCTTTACGGTTA+TGG 0.315867 3:+34213360 MsG0380013278.01.T01:CDS
GTGATATTTGGCTCAGTCAT+AGG 0.342833 3:+34214352 MsG0380013278.01.T01:CDS
AGTGTTGCAATTTCATTGAT+TGG 0.350979 3:+34216691 MsG0380013278.01.T01:CDS
GAAAGCAGGCTCCAGAAAAT+TGG 0.354252 3:-34213043 None:intergenic
CTGCGTCAAGAAAGAACTTA+TGG 0.360538 3:+34216861 MsG0380013278.01.T01:CDS
AGCAATATACACAGCACAAA+TGG 0.369111 3:-34211609 None:intergenic
CTGTAAGAAATGATCCAATA+TGG 0.372997 3:-34214289 None:intergenic
TGAGCCATTGTTTCTGCATA+AGG 0.381459 3:-34211849 None:intergenic
AGAAGGGTGGATCATTGTTA+TGG 0.382568 3:+34215021 MsG0380013278.01.T01:intron
CAAACTAAGCAAAGTTTATC+CGG 0.383893 3:+34215636 MsG0380013278.01.T01:CDS
ATTCAGTTTCTGTTGGGATC+TGG 0.388018 3:+34213889 MsG0380013278.01.T01:CDS
ACTTCAACTTACTTGTGTTA+AGG 0.394591 3:-34216238 None:intergenic
TGTTGTTAATCGTGCAAAAC+AGG 0.409280 3:+34216886 MsG0380013278.01.T01:CDS
GTCTCGGTGATGGGCCATAT+TGG 0.409881 3:+34214275 MsG0380013278.01.T01:CDS
CATTCCGTAGGGTTAGTAAT+AGG 0.416638 3:-34211747 None:intergenic
CAGCATGTAGATAACTGATA+TGG 0.419229 3:-34214323 None:intergenic
GAGCCATTGTTTCTGCATAA+GGG 0.419780 3:-34211848 None:intergenic
ATATATTTAATGTCAGTATA+TGG 0.421523 3:+34213573 MsG0380013278.01.T01:CDS
TTCCTACATTCAGTTTCTGT+TGG 0.425144 3:+34213882 MsG0380013278.01.T01:CDS
ATGATTGCATGATTCATAGT+AGG 0.425171 3:-34215607 None:intergenic
TCCTACATTCAGTTTCTGTT+GGG 0.428334 3:+34213883 MsG0380013278.01.T01:CDS
CGGCTTTGATAGAATTGCAT+TGG 0.442146 3:+34213622 MsG0380013278.01.T01:CDS
GGATCAGGTGTTTGCAGTAA+AGG 0.452286 3:-34211774 None:intergenic
ACAGCGCGGTATCGTGGATC+AGG 0.454481 3:-34211789 None:intergenic
AAAATGCACGGTCTCGGTGA+TGG 0.461587 3:+34214265 MsG0380013278.01.T01:CDS
CCACTTATAAACACATTGTC+AGG 0.467358 3:-34210869 None:intergenic
TTTCATTGATTGGAGATCCT+AGG 0.471519 3:+34216701 MsG0380013278.01.T01:CDS
AATGTTGTTTGAGTTTGTAA+AGG 0.472981 3:+34213918 MsG0380013278.01.T01:CDS
CCCGGGTTTGCCTTATATCG+TGG 0.474072 3:+34215052 MsG0380013278.01.T01:CDS
CTAACACAACCCCACAAAAC+CGG 0.475920 3:-34210913 None:intergenic
TTCATTGATTGGAGATCCTA+GGG 0.479591 3:+34216702 MsG0380013278.01.T01:CDS
TCAGGTACAGCATTTGTTCA+AGG 0.481991 3:+34215986 MsG0380013278.01.T01:CDS
GATCTCAATGATAGCACAAA+TGG 0.482512 3:+34215142 MsG0380013278.01.T01:CDS
AACTAGAATTAGTACAAACT+TGG 0.482667 3:-34213306 None:intergenic
CTAGCGGTCGATATCTGAAC+AGG 0.484332 3:-34213129 None:intergenic
TCCATCTTAGAAATTGTGGT+TGG 0.489371 3:-34210938 None:intergenic
ATTGTTTCTGCATAAGGGGT+TGG 0.490068 3:-34211843 None:intergenic
CCCAACCACAATTTCTAAGA+TGG 0.490311 3:+34210937 MsG0380013278.01.T01:CDS
ATTGTTATGGAGTTATATCC+CGG 0.491503 3:+34215034 MsG0380013278.01.T01:CDS
CCGGGTTTGCCTTATATCGT+GGG 0.493382 3:+34215053 MsG0380013278.01.T01:CDS
ACCATCCATCTTAGAAATTG+TGG 0.494800 3:-34210942 None:intergenic
GGGGACTCATGGTATGCGGT+GGG 0.495358 3:+34215117 MsG0380013278.01.T01:CDS
CCCCACAAAACCGGCTGGTG+AGG 0.496661 3:-34210904 None:intergenic
TGTCCCTCACTATGCTTCAC+TGG 0.499943 3:+34211872 MsG0380013278.01.T01:CDS
CCATCTTAGAAATTGTGGTT+GGG 0.500947 3:-34210937 None:intergenic
TGACTTTGTAGATAGTAAAT+GGG 0.501498 3:-34213078 None:intergenic
CCCACGATATAAGGCAAACC+CGG 0.502468 3:-34215053 None:intergenic
GCAATCCTCGCCTCACCAGC+CGG 0.508794 3:+34210894 MsG0380013278.01.T01:CDS
GCAATATACACAGCACAAAT+GGG 0.510253 3:-34211608 None:intergenic
TATATGGATGAACCAAGTAC+TGG 0.513490 3:+34216830 MsG0380013278.01.T01:CDS
AAATGCACGGTCTCGGTGAT+GGG 0.514995 3:+34214266 MsG0380013278.01.T01:CDS
GGGGTTGGAAAATCAGAAAA+CGG 0.516949 3:-34211828 None:intergenic
GAAGCCACGTCAAACTTTAA+GGG 0.517640 3:-34213961 None:intergenic
TATAGAGTTAAGATGTGCTC+AGG 0.521272 3:+34213346 MsG0380013278.01.T01:CDS
GACATAAGAACGGATATGAA+TGG 0.523918 3:+34216013 MsG0380013278.01.T01:CDS
ATGATGAAAATGCACGGTCT+CGG 0.526487 3:+34214259 MsG0380013278.01.T01:CDS
CATAAGTTCTTTCTTGACGC+AGG 0.528231 3:-34216860 None:intergenic
TAAGTCTGCCATAAAAGAGT+AGG 0.528252 3:-34216197 None:intergenic
ATGAGTCCCCATAGTATCTC+CGG 0.531116 3:-34215104 None:intergenic
GTAAAGGAAATGCCAAAACC+TGG 0.534603 3:+34213934 MsG0380013278.01.T01:CDS
GTTCAATTTCTTCAGAAGGG+TGG 0.535432 3:+34215008 MsG0380013278.01.T01:intron
GAATGGAATATATACTAGCA+TGG 0.536712 3:+34216030 MsG0380013278.01.T01:CDS
CAAAGTTTATCCGGGGAGGA+TGG 0.537120 3:+34215645 MsG0380013278.01.T01:CDS
TGGTAATGTTTACAGATGAT+AGG 0.537674 3:+34215947 MsG0380013278.01.T01:intron
ATAGTGGAGGAATGAAGAGG+AGG 0.538557 3:+34216665 MsG0380013278.01.T01:CDS
CTCATAAACTAATGATGTGA+GGG 0.539387 3:-34214215 None:intergenic
AAACTAAGCAAAGTTTATCC+GGG 0.546359 3:+34215637 MsG0380013278.01.T01:CDS
CAATGCAATTCTATCAAAGC+CGG 0.547605 3:-34213621 None:intergenic
CCTGACAATGTGTTTATAAG+TGG 0.550236 3:+34210869 MsG0380013278.01.T01:CDS
GTTCTAACAGCGCGGTATCG+TGG 0.554302 3:-34211795 None:intergenic
ATAAGTTCTTTCTTGACGCA+GGG 0.554976 3:-34216859 None:intergenic
AGCCATTGTTTCTGCATAAG+GGG 0.558123 3:-34211847 None:intergenic
AATGGAATATATACTAGCAT+GGG 0.558419 3:+34216031 MsG0380013278.01.T01:CDS
TTCCAGCTTACTCGTGCTGA+GGG 0.559990 3:-34216060 None:intergenic
GGAAGCTCTGAAAAGAAAGC+AGG 0.562519 3:-34213057 None:intergenic
CACAACCCCACAAAACCGGC+TGG 0.563603 3:-34210909 None:intergenic
ACAAATGCTGTACCTGAGGT+TGG 0.564179 3:-34215980 None:intergenic
ATTTACACTTTAGACGGAGA+AGG 0.570050 3:+34215564 MsG0380013278.01.T01:intron
GCAGGGTCTAATCCAGTACT+TGG 0.570804 3:-34216842 None:intergenic
AGTATAGTGGAGGAATGAAG+AGG 0.572247 3:+34216662 MsG0380013278.01.T01:CDS
GGTCTTACAAAGCCAACCTC+AGG 0.574768 3:+34215968 MsG0380013278.01.T01:CDS
AGTAAAGGAGGCCATTCCGT+AGG 0.575779 3:-34211759 None:intergenic
TCTCCGGTTACCATCCTCCC+CGG 0.581213 3:-34215655 None:intergenic
TTGTCCTATTACTAACCCTA+CGG 0.584761 3:+34211743 MsG0380013278.01.T01:CDS
TGGGGACTCATGGTATGCGG+TGG 0.586806 3:+34215116 MsG0380013278.01.T01:CDS
TACACTTTAGACGGAGAAGG+TGG 0.587151 3:+34215567 MsG0380013278.01.T01:intron
GTCTCACATCGGATAAGAGA+TGG 0.587184 3:+34210846 MsG0380013278.01.T01:CDS
AAGCCACGTCAAACTTTAAG+GGG 0.590903 3:-34213960 None:intergenic
TCAACTTACTTGTGTTAAGG+CGG 0.594619 3:-34216235 None:intergenic
TAGCACAAATGGCATGAAAG+AGG 0.600475 3:+34215153 MsG0380013278.01.T01:CDS
TCTCATAAACTAATGATGTG+AGG 0.602088 3:-34214216 None:intergenic
ACCACAATTTCTAAGATGGA+TGG 0.603123 3:+34210941 MsG0380013278.01.T01:CDS
TTGATAGAATTGCATTGGCG+CGG 0.607143 3:+34213627 MsG0380013278.01.T01:CDS
GGAGATACTATGGGGACTCA+TGG 0.607181 3:+34215106 MsG0380013278.01.T01:CDS
CTGACAATGTGTTTATAAGT+GGG 0.607656 3:+34210870 MsG0380013278.01.T01:CDS
TTGTTATGGAGTTATATCCC+GGG 0.607715 3:+34215035 MsG0380013278.01.T01:CDS
ATTCCAGCTTACTCGTGCTG+AGG 0.613343 3:-34216061 None:intergenic
CAAAACCGGCTGGTGAGGCG+AGG 0.613975 3:-34210899 None:intergenic
TATACCAAATTTACAGAACG+AGG 0.615146 3:-34213653 None:intergenic
GTAAAGGAGGCCATTCCGTA+GGG 0.617629 3:-34211758 None:intergenic
TCCCAACAGAAACTGAATGT+AGG 0.620147 3:-34213884 None:intergenic
GAAATGTGAAGACAAACGTA+AGG 0.622854 3:+34211574 MsG0380013278.01.T01:CDS
TCAAGGTCTTGACATAAGAA+CGG 0.624274 3:+34216003 MsG0380013278.01.T01:CDS
GACAATGTGTTTATAAGTGG+GGG 0.629313 3:+34210872 MsG0380013278.01.T01:CDS
CATCTTAACTCTATATCCAG+TGG 0.629616 3:-34213338 None:intergenic
TGACAATGTGTTTATAAGTG+GGG 0.631068 3:+34210871 MsG0380013278.01.T01:CDS
TCAGGTGTTTGCAGTAAAGG+AGG 0.631644 3:-34211771 None:intergenic
AAAGCTGGAAAGTATAGTGG+AGG 0.632446 3:+34216652 MsG0380013278.01.T01:CDS
AACCCCTTATGCAGAAACAA+TGG 0.633647 3:+34211845 MsG0380013278.01.T01:CDS
TAAAGGAAATGCCAAAACCT+GGG 0.638307 3:+34213935 MsG0380013278.01.T01:CDS
AATACCAGTGAAGCATAGTG+AGG 0.638387 3:-34211876 None:intergenic
CATACCTTGCTGCACGCTAG+CGG 0.640696 3:-34213145 None:intergenic
CTATTACTAACCCTACGGAA+TGG 0.640962 3:+34211748 MsG0380013278.01.T01:CDS
AGAATCATGATGAAAATGCA+CGG 0.641632 3:+34214253 MsG0380013278.01.T01:CDS
GGGACTCATGGTATGCGGTG+GGG 0.650874 3:+34215118 MsG0380013278.01.T01:CDS
TCGACCGCTAGCGTGCAGCA+AGG 0.653408 3:+34213141 MsG0380013278.01.T01:CDS
ATACCAGTGAAGCATAGTGA+GGG 0.655058 3:-34211875 None:intergenic
AACTAAGCAAAGTTTATCCG+GGG 0.656911 3:+34215638 MsG0380013278.01.T01:CDS
TAAGCAAAGTTTATCCGGGG+AGG 0.665815 3:+34215641 MsG0380013278.01.T01:CDS
CCACGATATAAGGCAAACCC+GGG 0.667655 3:-34215052 None:intergenic
TTGAACAAATGCTGTACCTG+AGG 0.671899 3:-34215984 None:intergenic
CTATGGGGACTCATGGTATG+CGG 0.676111 3:+34215113 MsG0380013278.01.T01:CDS
TACTAGTCAGAATGATTGCG+CGG 0.690172 3:-34216910 None:intergenic
TATGTTAAAGAGTCTCACAT+CGG 0.710964 3:+34210835 None:intergenic
TACTATCTACAAAGTCAGTG+CGG 0.713074 3:+34213084 MsG0380013278.01.T01:CDS
AGCCACGTCAAACTTTAAGG+GGG 0.716568 3:-34213959 None:intergenic
GAAAATACGTTCTAACAGCG+CGG 0.756765 3:-34211803 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTATATTAAAATAAACTA+AGG - Chr3:34212847-34212866 None:intergenic 10.0%
!! AATATTATCAAAACAAATGT+TGG - Chr3:34213744-34213763 None:intergenic 15.0%
!! ATATATTTAATGTCAGTATA+TGG + Chr3:34213573-34213592 MsG0380013278.01.T01:CDS 15.0%
!! ATGTATCTTGAATAAAAAAT+TGG - Chr3:34214733-34214752 None:intergenic 15.0%
!!! ACATTTGTTTTGATAATATT+TGG + Chr3:34213744-34213763 MsG0380013278.01.T01:intron 15.0%
!!! ATTTTCACATTAGAAAAAAA+GGG - Chr3:34212790-34212809 None:intergenic 15.0%
!!! CATTTGTTTTGATAATATTT+GGG + Chr3:34213745-34213764 MsG0380013278.01.T01:intron 15.0%
!!! GTTTAATTTCATCAAATATT+CGG - Chr3:34216392-34216411 None:intergenic 15.0%
!!! TATTTTCACATTAGAAAAAA+AGG - Chr3:34212791-34212810 None:intergenic 15.0%
!!! TGTATATAATTTTTTCCTTT+TGG + Chr3:34216136-34216155 MsG0380013278.01.T01:intron 15.0%
!!! TTTTTCTTCTATTTTTGTAA+TGG + Chr3:34214652-34214671 MsG0380013278.01.T01:intron 15.0%
!! AAATATATACTGTTATCCTT+AGG + Chr3:34212806-34212825 MsG0380013278.01.T01:intron 20.0%
!! ATATATAAAGGCTATAGAAA+AGG + Chr3:34213411-34213430 MsG0380013278.01.T01:intron 20.0%
!! ATGCTATGATTAATGAATTA+AGG - Chr3:34215926-34215945 None:intergenic 20.0%
!! GTAAACAATGCTATATATAA+AGG + Chr3:34213399-34213418 MsG0380013278.01.T01:intron 20.0%
!! TCTCAATAATCAATTTGATA+AGG + Chr3:34211650-34211669 MsG0380013278.01.T01:intron 20.0%
!! TTGGAAAATACACATTTAAA+GGG - Chr3:34213725-34213744 None:intergenic 20.0%
!! TTTGGTATAAATTCAAACTT+TGG + Chr3:34213667-34213686 MsG0380013278.01.T01:intron 20.0%
!!! ATGTTTTCTAATTCTGTAAT+TGG + Chr3:34216788-34216807 MsG0380013278.01.T01:intron 20.0%
!!! TGTAATTGGTAATTTTGTTA+AGG + Chr3:34216802-34216821 MsG0380013278.01.T01:intron 20.0%
!!! TTTTGTTAAGGTTGTTTATA+TGG + Chr3:34216814-34216833 MsG0380013278.01.T01:intron 20.0%
! AAAGGATTTCAGAAAAAACT+TGG + Chr3:34215280-34215299 MsG0380013278.01.T01:intron 25.0%
! AAATTGTCATGTTTCTTTCT+AGG + Chr3:34213253-34213272 MsG0380013278.01.T01:intron 25.0%
! AACTAGAATTAGTACAAACT+TGG - Chr3:34213309-34213328 None:intergenic 25.0%
! AAGTTTCAAAAATCTTTAGC+AGG + Chr3:34216257-34216276 MsG0380013278.01.T01:intron 25.0%
! AATGGAATATATACTAGCAT+GGG + Chr3:34216031-34216050 MsG0380013278.01.T01:CDS 25.0%
! AATTCATTAATCATAGCATC+TGG + Chr3:34215927-34215946 MsG0380013278.01.T01:intron 25.0%
! AGAGATAGAATGATATTTGA+AGG + Chr3:34212122-34212141 MsG0380013278.01.T01:intron 25.0%
! AGATGAAATAAAACACGAAT+TGG - Chr3:34214501-34214520 None:intergenic 25.0%
! AGTTTCAAAAATCTTTAGCA+GGG + Chr3:34216258-34216277 MsG0380013278.01.T01:intron 25.0%
! ATCAACATTAGAGAAAAATG+TGG - Chr3:34212881-34212900 None:intergenic 25.0%
! ATTTGAATTGTCTATGTCAA+TGG - Chr3:34212699-34212718 None:intergenic 25.0%
! CAATCAAAAAACCAAAAGAA+AGG - Chr3:34214985-34215004 None:intergenic 25.0%
! CAGAAAATACCAAAAAGAAA+CGG - Chr3:34214412-34214431 None:intergenic 25.0%
! CATAGACAATTCAAATGTAA+TGG + Chr3:34212703-34212722 MsG0380013278.01.T01:intron 25.0%
! CATATCATAACATGCTAATA+CGG + Chr3:34214840-34214859 MsG0380013278.01.T01:intron 25.0%
! CTTGTAAGATATATGATAAC+AGG + Chr3:34213196-34213215 MsG0380013278.01.T01:intron 25.0%
! GATAAAAAAAAACATACCCT+AGG - Chr3:34216721-34216740 None:intergenic 25.0%
! GATAATACATATTACACCTA+AGG - Chr3:34212825-34212844 None:intergenic 25.0%
! GTTGGAAAATACACATTTAA+AGG - Chr3:34213726-34213745 None:intergenic 25.0%
! TAAACAAATGCTATAGTTAC+AGG - Chr3:34216535-34216554 None:intergenic 25.0%
! TAACCATGTAAATCTTGTTA+CGG + Chr3:34214142-34214161 MsG0380013278.01.T01:intron 25.0%
! TATAAACTTACAAATTTCGC+TGG + Chr3:34214522-34214541 MsG0380013278.01.T01:intron 25.0%
! TATTAGCATGTTATGATATG+TGG - Chr3:34214840-34214859 None:intergenic 25.0%
! TGACTTTGTAGATAGTAAAT+GGG - Chr3:34213081-34213100 None:intergenic 25.0%
! TTTGTTTAGTAGATAAGACT+CGG + Chr3:34216547-34216566 MsG0380013278.01.T01:intron 25.0%
!! AAAAACTTGGTTCATCTTTT+CGG + Chr3:34215293-34215312 MsG0380013278.01.T01:intron 25.0%
!! AAGATTTTTATCAACATGGT+TGG + Chr3:34215754-34215773 MsG0380013278.01.T01:intron 25.0%
!! AAGCACATTTATTTAGGATA+AGG - Chr3:34212473-34212492 None:intergenic 25.0%
!! AATGTTGTTTGAGTTTGTAA+AGG + Chr3:34213918-34213937 MsG0380013278.01.T01:CDS 25.0%
!! ATCCTAAATAAATGTGCTTT+TGG + Chr3:34212474-34212493 MsG0380013278.01.T01:intron 25.0%
!! CATACACATTTAAGTTACAA+AGG - Chr3:34211961-34211980 None:intergenic 25.0%
!! TACAAACTCAAACAACATTT+TGG - Chr3:34213917-34213936 None:intergenic 25.0%
!! TACAGTTTTTCTATTCCATT+TGG - Chr3:34215520-34215539 None:intergenic 25.0%
!! TACGTTTTCTATATCTAGTT+AGG + Chr3:34212224-34212243 MsG0380013278.01.T01:intron 25.0%
!! TCACGTAATATCTTTTTATG+TGG + Chr3:34214117-34214136 MsG0380013278.01.T01:intron 25.0%
!! TCTCAATTATTTGACTTACT+TGG - Chr3:34214761-34214780 None:intergenic 25.0%
!!! AAAAGTGTAAACCTTTTTCA+TGG + Chr3:34216613-34216632 MsG0380013278.01.T01:CDS 25.0%
!!! TATTTCCATATTGTTTTGAC+AGG + Chr3:34213524-34213543 MsG0380013278.01.T01:intron 25.0%
AAAATACGCCACAAACTATT+CGG - Chr3:34216454-34216473 None:intergenic 30.0%
AAACTAAGCAAAGTTTATCC+GGG + Chr3:34215637-34215656 MsG0380013278.01.T01:CDS 30.0%
AACCATGTAAATCTTGTTAC+GGG + Chr3:34214143-34214162 MsG0380013278.01.T01:intron 30.0%
AAGAAAATTTAACATGCTGC+AGG + Chr3:34216573-34216592 MsG0380013278.01.T01:intron 30.0%
AAGGACAACTATTAAGGATA+AGG - Chr3:34212454-34212473 None:intergenic 30.0%
AATCCTTTCAAGAACAAAAG+AGG - Chr3:34215268-34215287 None:intergenic 30.0%
ACTGGTATTAATCAGTCTTT+CGG + Chr3:34211890-34211909 MsG0380013278.01.T01:intron 30.0%
ACTTCAACTTACTTGTGTTA+AGG - Chr3:34216241-34216260 None:intergenic 30.0%
AGAATCATGATGAAAATGCA+CGG + Chr3:34214253-34214272 MsG0380013278.01.T01:CDS 30.0%
AGGACAACTATTAAGGATAA+GGG - Chr3:34212453-34212472 None:intergenic 30.0%
AGTGTTGCAATTTCATTGAT+TGG + Chr3:34216691-34216710 MsG0380013278.01.T01:CDS 30.0%
ATATTACGTGAAGAATTGAG+AGG - Chr3:34214108-34214127 None:intergenic 30.0%
ATCTTAATGACTAAAGTGTG+TGG + Chr3:34216362-34216381 MsG0380013278.01.T01:intron 30.0%
ATGATTGCATGATTCATAGT+AGG - Chr3:34215610-34215629 None:intergenic 30.0%
ATTGCAGTGTAGACATAAAT+TGG + Chr3:34216508-34216527 MsG0380013278.01.T01:intron 30.0%
ATTGTTATGGAGTTATATCC+CGG + Chr3:34215034-34215053 MsG0380013278.01.T01:CDS 30.0%
ATTTGGATTTGCGTTTCTAT+CGG - Chr3:34215503-34215522 None:intergenic 30.0%
CAAACTAAGCAAAGTTTATC+CGG + Chr3:34215636-34215655 MsG0380013278.01.T01:CDS 30.0%
CTCATAAACTAATGATGTGA+GGG - Chr3:34214218-34214237 None:intergenic 30.0%
CTGACAATGTGTTTATAAGT+GGG + Chr3:34210870-34210889 MsG0380013278.01.T01:CDS 30.0%
CTGACTTTGTAGATAGTAAA+TGG - Chr3:34213082-34213101 None:intergenic 30.0%
CTGTAAGAAATGATCCAATA+TGG - Chr3:34214292-34214311 None:intergenic 30.0%
CTTGTTCAATTTCTTCAGAA+GGG + Chr3:34215005-34215024 MsG0380013278.01.T01:intron 30.0%
GAATGGAATATATACTAGCA+TGG + Chr3:34216030-34216049 MsG0380013278.01.T01:CDS 30.0%
GACGTAGTTTCATATATTTC+AGG - Chr3:34211986-34212005 None:intergenic 30.0%
GCAACTGTCATAATGTTATA+GGG + Chr3:34212997-34213016 MsG0380013278.01.T01:intron 30.0%
GGCAGACTTAAAAATCTTAA+AGG + Chr3:34216210-34216229 MsG0380013278.01.T01:CDS 30.0%
GGTTCTATTTATAGTGTTTC+TGG + Chr3:34212271-34212290 MsG0380013278.01.T01:intron 30.0%
GTGTTCATTTACACTTTAGA+CGG + Chr3:34215558-34215577 MsG0380013278.01.T01:intron 30.0%
TAGGATAAGGACAACTATTA+AGG - Chr3:34212460-34212479 None:intergenic 30.0%
TATACCAAATTTACAGAACG+AGG - Chr3:34213656-34213675 None:intergenic 30.0%
TATAGAAAACGTAAGAGCTT+CGG - Chr3:34212217-34212236 None:intergenic 30.0%
TCAACCTATAAAAATGACAC+CGG + Chr3:34213602-34213621 MsG0380013278.01.T01:CDS 30.0%
TCAGTATGAAAGAATATGTC+AGG + Chr3:34211363-34211382 MsG0380013278.01.T01:intron 30.0%
TCATGCTTATATGTTGATGT+AGG + Chr3:34214189-34214208 MsG0380013278.01.T01:intron 30.0%
TCTCATAAACTAATGATGTG+AGG - Chr3:34214219-34214238 None:intergenic 30.0%
TCTTTGTAAACACTGATGAT+GGG + Chr3:34212974-34212993 MsG0380013278.01.T01:intron 30.0%
TGACAATGTGTTTATAAGCT+GGG + Chr3:34211111-34211130 MsG0380013278.01.T01:intron 30.0%
TGACAATGTGTTTATAAGTG+GGG + Chr3:34210871-34210890 MsG0380013278.01.T01:CDS 30.0%
TGCATCATAAATAACCTATC+AGG - Chr3:34213787-34213806 None:intergenic 30.0%
TTCATATAACCCACGATATA+AGG - Chr3:34215065-34215084 None:intergenic 30.0%
TTCTTTGTAAACACTGATGA+TGG + Chr3:34212973-34212992 MsG0380013278.01.T01:intron 30.0%
TTTAGTATCTATATGCTTGC+AGG + Chr3:34213852-34213871 MsG0380013278.01.T01:intron 30.0%
! AAAAAAGCTGGAAAGTATAG+TGG + Chr3:34216649-34216668 MsG0380013278.01.T01:CDS 30.0%
! ATGCTGTGTTTTGTGATATT+TGG + Chr3:34214340-34214359 MsG0380013278.01.T01:CDS 30.0%
! CATAAACTAGCCTAAAAACA+TGG - Chr3:34216420-34216439 None:intergenic 30.0%
! CTCCAAAAGCACATTTATTT+AGG - Chr3:34212479-34212498 None:intergenic 30.0%
! GTTGCATATATAGGTGTTTT+TGG + Chr3:34214680-34214699 MsG0380013278.01.T01:intron 30.0%
! TAAACAGTGTCCATGTTTTT+AGG + Chr3:34216407-34216426 MsG0380013278.01.T01:intron 30.0%
! TGGGAAGATTTTTATCAACA+TGG + Chr3:34215750-34215769 MsG0380013278.01.T01:intron 30.0%
! TGGTAATGTTTACAGATGAT+AGG + Chr3:34215947-34215966 MsG0380013278.01.T01:intron 30.0%
! TTCTATCAGGTTTTCGTTAT+CGG + Chr3:34211234-34211253 MsG0380013278.01.T01:intron 30.0%
! TTTGTAGTTTGTGTTTCTAC+TGG + Chr3:34215405-34215424 MsG0380013278.01.T01:intron 30.0%
! TTTTCACAATCGTCTTTTAC+CGG + Chr3:34215085-34215104 MsG0380013278.01.T01:CDS 30.0%
!! AAGTTTTATCAACAGGAAGT+TGG + Chr3:34215236-34215255 MsG0380013278.01.T01:intron 30.0%
!! ATCGATCAAGTTTTATCAAC+AGG + Chr3:34215229-34215248 MsG0380013278.01.T01:intron 30.0%
!! ATTTCTAAGATGGATGGTAT+CGG + Chr3:34210947-34210966 MsG0380013278.01.T01:intron 30.0%
!! TATTCGGATTTTGATCAAGT+TGG + Chr3:34211717-34211736 MsG0380013278.01.T01:intron 30.0%
!! TCTAGTTTATTGTTTTCCAC+TGG + Chr3:34213322-34213341 MsG0380013278.01.T01:CDS 30.0%
!!! TTCTATTTTTGTAATGGCAG+TGG + Chr3:34214658-34214677 MsG0380013278.01.T01:intron 30.0%
!!! TTTTGGTATTTTAGCTTGCT+GGG + Chr3:34216153-34216172 MsG0380013278.01.T01:intron 30.0%
AAAAAAAAACAGCAGCAGTG+AGG - Chr3:34214440-34214459 None:intergenic 35.0%
AAAAAAAACAGCAGCAGTGA+GGG - Chr3:34214439-34214458 None:intergenic 35.0%
AAAATTTAACATGCTGCAGG+CGG + Chr3:34216576-34216595 MsG0380013278.01.T01:intron 35.0%
AAACTTTAGATCCTTGCCTT+TGG - Chr3:34215330-34215349 None:intergenic 35.0%
AAAGCAAGAGAACAATTTGC+TGG - Chr3:34214389-34214408 None:intergenic 35.0%
AACACTATAAATAGAACCCC+TGG - Chr3:34212269-34212288 None:intergenic 35.0%
AACTAAGCAAAGTTTATCCG+GGG + Chr3:34215638-34215657 MsG0380013278.01.T01:CDS 35.0%
AAGACTGTAAAGAGAGAAAC+AGG - Chr3:34212653-34212672 None:intergenic 35.0%
AAGCAAACCAATGAGTACAT+TGG - Chr3:34215842-34215861 None:intergenic 35.0%
AAGTTCTCATATTGTCCTCA+TGG - Chr3:34212180-34212199 None:intergenic 35.0%
ACACTATAAATAGAACCCCT+GGG - Chr3:34212268-34212287 None:intergenic 35.0%
ACCATCCATCTTAGAAATTG+TGG - Chr3:34210945-34210964 None:intergenic 35.0%
AGAAACCTGATCTCTATCAT+CGG + Chr3:34215440-34215459 MsG0380013278.01.T01:intron 35.0%
AGCAATATACACAGCACAAA+TGG - Chr3:34211612-34211631 None:intergenic 35.0%
ATAAATATGCGAGTAAAGCG+GGG + Chr3:34214041-34214060 MsG0380013278.01.T01:intron 35.0%
ATAAGTTCTTTCTTGACGCA+GGG - Chr3:34216862-34216881 None:intergenic 35.0%
ATAGTCATGTTCTTAAGACG+CGG + Chr3:34212009-34212028 MsG0380013278.01.T01:intron 35.0%
ATCGGTATAGTTCACTCATT+TGG + Chr3:34215458-34215477 MsG0380013278.01.T01:intron 35.0%
ATCTATCATCAAACCTGTAG+CGG - Chr3:34214584-34214603 None:intergenic 35.0%
ATCTGCTATGCATGGTTTAA+GGG + Chr3:34212397-34212416 MsG0380013278.01.T01:intron 35.0%
ATGATTTGAGAATGATCCCA+GGG + Chr3:34212249-34212268 MsG0380013278.01.T01:intron 35.0%
ATGCAGCACACTTCATATTA+TGG - Chr3:34211497-34211516 None:intergenic 35.0%
ATGCATGGTTTAAGGGATAA+GGG + Chr3:34212404-34212423 MsG0380013278.01.T01:intron 35.0%
ATTAATCAGTCTTTCGGAGA+AGG + Chr3:34211896-34211915 MsG0380013278.01.T01:intron 35.0%
ATTTACACTTTAGACGGAGA+AGG + Chr3:34215564-34215583 MsG0380013278.01.T01:intron 35.0%
ATTTGTGCTGTGTATATTGC+TGG + Chr3:34211611-34211630 MsG0380013278.01.T01:CDS 35.0%
CAATGCAATTCTATCAAAGC+CGG - Chr3:34213624-34213643 None:intergenic 35.0%
CAGCAAGCTAAAATACCAAA+AGG - Chr3:34216154-34216173 None:intergenic 35.0%
CAGCATGTAGATAACTGATA+TGG - Chr3:34214326-34214345 None:intergenic 35.0%
CAGCTTATAAACACATTGTC+AGG - Chr3:34211112-34211131 None:intergenic 35.0%
CATAAATATGCGAGTAAAGC+GGG + Chr3:34214040-34214059 MsG0380013278.01.T01:intron 35.0%
CATAGCCTGTCAAAACAATA+TGG - Chr3:34213532-34213551 None:intergenic 35.0%
CATCTTAACTCTATATCCAG+TGG - Chr3:34213341-34213360 None:intergenic 35.0%
CCACTTATAAACACATTGTC+AGG - Chr3:34210872-34210891 None:intergenic 35.0%
CCATCTTAGAAATTGTGGTT+GGG - Chr3:34210940-34210959 None:intergenic 35.0%
CCTGACAATGTGTTTATAAG+TGG + Chr3:34210869-34210888 MsG0380013278.01.T01:CDS 35.0%
CTCGACACAATGATTGTATT+AGG - Chr3:34214896-34214915 None:intergenic 35.0%
CTCTGATACCATCTTAGAAA+TGG - Chr3:34211188-34211207 None:intergenic 35.0%
CTGACAATGTGTTTATAAGC+TGG + Chr3:34211110-34211129 MsG0380013278.01.T01:intron 35.0%
CTTAACATTTGAAAACAGCG+AGG - Chr3:34214560-34214579 None:intergenic 35.0%
GAAATGTGAAGACAAACGTA+AGG + Chr3:34211574-34211593 MsG0380013278.01.T01:CDS 35.0%
GACAATGTGTTTATAAGCTG+GGG + Chr3:34211112-34211131 MsG0380013278.01.T01:intron 35.0%
GACAATGTGTTTATAAGTGG+GGG + Chr3:34210872-34210891 MsG0380013278.01.T01:CDS 35.0%
GACATAAGAACGGATATGAA+TGG + Chr3:34216013-34216032 MsG0380013278.01.T01:CDS 35.0%
GATAACGAAAACCTGATAGA+AGG - Chr3:34211235-34211254 None:intergenic 35.0%
GATAAGGCCAAATATAAGTG+TGG + Chr3:34211666-34211685 MsG0380013278.01.T01:intron 35.0%
GATAGAAACGCAAATCCAAA+TGG + Chr3:34215502-34215521 MsG0380013278.01.T01:intron 35.0%
GATCTCAATGATAGCACAAA+TGG + Chr3:34215142-34215161 MsG0380013278.01.T01:CDS 35.0%
GATTCCTCGTTCTGTAAATT+TGG + Chr3:34213649-34213668 MsG0380013278.01.T01:CDS 35.0%
GCAATATACACAGCACAAAT+GGG - Chr3:34211611-34211630 None:intergenic 35.0%
GCATAAATATGCGAGTAAAG+CGG + Chr3:34214039-34214058 MsG0380013278.01.T01:intron 35.0%
GCTCAAGAAAAAAGGTTCTT+AGG - Chr3:34212316-34212335 None:intergenic 35.0%
GCTTGTTCAATTTCTTCAGA+AGG + Chr3:34215004-34215023 MsG0380013278.01.T01:intron 35.0%
GGCAACTGTCATAATGTTAT+AGG + Chr3:34212996-34213015 MsG0380013278.01.T01:intron 35.0%
GTCTTAAGAACATGACTATC+AGG - Chr3:34212008-34212027 None:intergenic 35.0%
TAAAGGAAATGCCAAAACCT+GGG + Chr3:34213935-34213954 MsG0380013278.01.T01:CDS 35.0%
TAAGTCTGCCATAAAAGAGT+AGG - Chr3:34216200-34216219 None:intergenic 35.0%
TACTATCTACAAAGTCAGTG+CGG + Chr3:34213084-34213103 MsG0380013278.01.T01:CDS 35.0%
TATAGAGTTAAGATGTGCTC+AGG + Chr3:34213346-34213365 MsG0380013278.01.T01:CDS 35.0%
TATATGGATGAACCAAGTAC+TGG + Chr3:34216830-34216849 MsG0380013278.01.T01:CDS 35.0%
TATGCATGGTTTAAGGGATA+AGG + Chr3:34212403-34212422 MsG0380013278.01.T01:intron 35.0%
TCAACTTACTTGTGTTAAGG+CGG - Chr3:34216238-34216257 None:intergenic 35.0%
TCAAGGTCTTGACATAAGAA+CGG + Chr3:34216003-34216022 MsG0380013278.01.T01:CDS 35.0%
TCCATCTTAGAAATTGTGGT+TGG - Chr3:34210941-34210960 None:intergenic 35.0%
TCCTACATTCAGTTTCTGTT+GGG + Chr3:34213883-34213902 MsG0380013278.01.T01:CDS 35.0%
TCGCATATTTATGCACTTAC+AGG - Chr3:34214033-34214052 None:intergenic 35.0%
TCGGTATAGTTCACTCATTT+GGG + Chr3:34215459-34215478 MsG0380013278.01.T01:intron 35.0%
TGAATGTGGGGTTCAATATT+CGG + Chr3:34211701-34211720 MsG0380013278.01.T01:intron 35.0%
TGATACCATCTTAGAAATGG+TGG - Chr3:34211185-34211204 None:intergenic 35.0%
TGTCATGTTTCTTTCTAGGT+AGG + Chr3:34213257-34213276 MsG0380013278.01.T01:intron 35.0%
TGTCTATGTCAATGGTACTT+GGG - Chr3:34212691-34212710 None:intergenic 35.0%
TGTGTTAAAGAGTCTCACAT+CGG + Chr3:34211075-34211094 MsG0380013278.01.T01:intron 35.0%
TGTTGTTAATCGTGCAAAAC+AGG + Chr3:34216886-34216905 MsG0380013278.01.T01:CDS 35.0%
TTCCTACATTCAGTTTCTGT+TGG + Chr3:34213882-34213901 MsG0380013278.01.T01:CDS 35.0%
TTGGTGAATATCTGCTTTCT+CGG - Chr3:34215361-34215380 None:intergenic 35.0%
TTGTCCTATTACTAACCCTA+CGG + Chr3:34211743-34211762 MsG0380013278.01.T01:CDS 35.0%
TTGTCTATGTCAATGGTACT+TGG - Chr3:34212692-34212711 None:intergenic 35.0%
TTGTTATGGAGTTATATCCC+GGG + Chr3:34215035-34215054 MsG0380013278.01.T01:CDS 35.0%
! AATTTCGCTGGCATTTTTGT+TGG + Chr3:34214534-34214553 MsG0380013278.01.T01:intron 35.0%
! AGTCCTCTTTTGTTCTTGAA+AGG + Chr3:34215262-34215281 MsG0380013278.01.T01:intron 35.0%
! ATGGTTTTCTGTACAACTGA+TGG + Chr3:34212584-34212603 MsG0380013278.01.T01:intron 35.0%
! CTTAGGTTGTTACGACTAAA+GGG - Chr3:34212299-34212318 None:intergenic 35.0%
! CTTTGTAAACACTGATGATG+GGG + Chr3:34212975-34212994 MsG0380013278.01.T01:intron 35.0%
! TAAGATTTTGTGCACCTGAT+AGG + Chr3:34213770-34213789 MsG0380013278.01.T01:intron 35.0%
! TCTATCAGGTTTTCGTTATC+GGG + Chr3:34211235-34211254 MsG0380013278.01.T01:intron 35.0%
! TCTTAGGTTGTTACGACTAA+AGG - Chr3:34212300-34212319 None:intergenic 35.0%
! TCTTGCTTTCCGTTTCTTTT+TGG + Chr3:34214400-34214419 MsG0380013278.01.T01:intron 35.0%
! TCTTTTACCGGAGATACTAT+GGG + Chr3:34215097-34215116 MsG0380013278.01.T01:CDS 35.0%
! TGTGGCGTATTTTTCTGTTA+AGG + Chr3:34216461-34216480 MsG0380013278.01.T01:intron 35.0%
! TTAGGTTGTTACGACTAAAG+GGG - Chr3:34212298-34212317 None:intergenic 35.0%
! TTCATTGATTGGAGATCCTA+GGG + Chr3:34216702-34216721 MsG0380013278.01.T01:CDS 35.0%
! TTTCATTGATTGGAGATCCT+AGG + Chr3:34216701-34216720 MsG0380013278.01.T01:CDS 35.0%
!! ACCACAATTTCTAAGATGGA+TGG + Chr3:34210941-34210960 MsG0380013278.01.T01:CDS 35.0%
!! AGTGTAAACCTTTTTCATGG+AGG + Chr3:34216616-34216635 MsG0380013278.01.T01:CDS 35.0%
!! ATGTTGGCTAACCTTTCTTT+TGG + Chr3:34214971-34214990 MsG0380013278.01.T01:intron 35.0%
!! GTGTAAACCTTTTTCATGGA+GGG + Chr3:34216617-34216636 MsG0380013278.01.T01:CDS 35.0%
!! TACCTGGTCAAAGGTTTTAA+AGG + Chr3:34214791-34214810 MsG0380013278.01.T01:intron 35.0%
!! TGTAAACCTTTTTCATGGAG+GGG + Chr3:34216618-34216637 MsG0380013278.01.T01:CDS 35.0%
!! TTCCTTTAAAACCTTTGACC+AGG - Chr3:34214796-34214815 None:intergenic 35.0%
!!! AAAGCCGGTGTCATTTTTAT+AGG - Chr3:34213609-34213628 None:intergenic 35.0%
!!! CTGCTGCTGTTTTTTTTTTC+AGG + Chr3:34214442-34214461 MsG0380013278.01.T01:intron 35.0%
!!! CTTTTGGTATTTTAGCTTGC+TGG + Chr3:34216152-34216171 MsG0380013278.01.T01:intron 35.0%
!!! TATATAGGTGTTTTTGGCAC+TGG + Chr3:34214686-34214705 MsG0380013278.01.T01:intron 35.0%
!!! TTTGGTATTTTAGCTTGCTG+GGG + Chr3:34216154-34216173 MsG0380013278.01.T01:intron 35.0%
AAAAAAACAGCAGCAGTGAG+GGG - Chr3:34214438-34214457 None:intergenic 40.0%
AAAAATCTTCCCAGCACCAT+TGG - Chr3:34215743-34215762 None:intergenic 40.0%
AAAATCTTCCCAGCACCATT+GGG - Chr3:34215742-34215761 None:intergenic 40.0%
AACCCCTTATGCAGAAACAA+TGG + Chr3:34211845-34211864 MsG0380013278.01.T01:CDS 40.0%
AACGAAAACCTGATAGAAGG+TGG - Chr3:34211232-34211251 None:intergenic 40.0%
AACTTGACTCTTATCCGATG+TGG - Chr3:34211328-34211347 None:intergenic 40.0%
AAGCCACGTCAAACTTTAAG+GGG - Chr3:34213963-34213982 None:intergenic 40.0%
AATACCAGTGAAGCATAGTG+AGG - Chr3:34211879-34211898 None:intergenic 40.0%
ACTTGACTCTTATCCGATGT+GGG - Chr3:34211327-34211346 None:intergenic 40.0%
AGAAGCCACGTCAAACTTTA+AGG - Chr3:34213965-34213984 None:intergenic 40.0%
AGAAGGGTGGATCATTGTTA+TGG + Chr3:34215021-34215040 MsG0380013278.01.T01:intron 40.0%
ATAAGACATGACGGTCAACA+TGG + Chr3:34212565-34212584 MsG0380013278.01.T01:intron 40.0%
ATACCAGTGAAGCATAGTGA+GGG - Chr3:34211878-34211897 None:intergenic 40.0%
ATGATGAAAATGCACGGTCT+CGG + Chr3:34214259-34214278 MsG0380013278.01.T01:CDS 40.0%
ATGGCAGTGGTTGCATATAT+AGG + Chr3:34214671-34214690 MsG0380013278.01.T01:intron 40.0%
ATGGTAACCGGAGAAATTTG+CGG + Chr3:34215664-34215683 MsG0380013278.01.T01:intron 40.0%
ATTCAGTTTCTGTTGGGATC+TGG + Chr3:34213889-34213908 MsG0380013278.01.T01:CDS 40.0%
CAAACCAATGAGTACATTGG+CGG - Chr3:34215839-34215858 None:intergenic 40.0%
CAAATATAAGTGTGGATGCG+TGG + Chr3:34211674-34211693 MsG0380013278.01.T01:intron 40.0%
CACGCATCCACACTTATATT+TGG - Chr3:34211676-34211695 None:intergenic 40.0%
CACTTACAGGAAAAAGTTGC+AGG - Chr3:34214020-34214039 None:intergenic 40.0%
CATAAGTTCTTTCTTGACGC+AGG - Chr3:34216863-34216882 None:intergenic 40.0%
CATAATCGAAACTGGAACCT+TGG - Chr3:34213819-34213838 None:intergenic 40.0%
CATCTGCTATGCATGGTTTA+AGG + Chr3:34212396-34212415 MsG0380013278.01.T01:intron 40.0%
CATCTTTCTTACTAGCCATG+AGG + Chr3:34212162-34212181 MsG0380013278.01.T01:intron 40.0%
CATGATTTGAGAATGATCCC+AGG + Chr3:34212248-34212267 MsG0380013278.01.T01:intron 40.0%
CCATCTTAGAAATGGTGGTT+AGG - Chr3:34211180-34211199 None:intergenic 40.0%
CGGCTAAAGCTCAAGAAAAA+AGG - Chr3:34212324-34212343 None:intergenic 40.0%
CTATACCGATGATAGAGATC+AGG - Chr3:34215448-34215467 None:intergenic 40.0%
CTATTACTAACCCTACGGAA+TGG + Chr3:34211748-34211767 MsG0380013278.01.T01:CDS 40.0%
CTGCGTCAAGAAAGAACTTA+TGG + Chr3:34216861-34216880 MsG0380013278.01.T01:CDS 40.0%
GAAAATACGTTCTAACAGCG+CGG - Chr3:34211806-34211825 None:intergenic 40.0%
GAAAGCAGATATTCACCAAG+AGG + Chr3:34215362-34215381 MsG0380013278.01.T01:intron 40.0%
GAAGCCACGTCAAACTTTAA+GGG - Chr3:34213964-34213983 None:intergenic 40.0%
GAGTACATTGGCGGAAAAAA+GGG - Chr3:34215830-34215849 None:intergenic 40.0%
GCGGTTTGAATAAGACATGA+CGG + Chr3:34212556-34212575 MsG0380013278.01.T01:intron 40.0%
GCTCGTATCATAATCGAAAC+TGG - Chr3:34213827-34213846 None:intergenic 40.0%
GGACGCTAGAAAATTAGATC+GGG + Chr3:34216279-34216298 MsG0380013278.01.T01:intron 40.0%
GGGACGCTAGAAAATTAGAT+CGG + Chr3:34216278-34216297 MsG0380013278.01.T01:intron 40.0%
GGGGTTGGAAAATCAGAAAA+CGG - Chr3:34211831-34211850 None:intergenic 40.0%
GGTCTTGATTATCATGTTCG+TGG + Chr3:34215174-34215193 MsG0380013278.01.T01:intron 40.0%
GGTTATTTATGATGCAGCAC+TGG + Chr3:34213791-34213810 MsG0380013278.01.T01:intron 40.0%
GTAAAGGAAATGCCAAAACC+TGG + Chr3:34213934-34213953 MsG0380013278.01.T01:CDS 40.0%
GTCCCGTAACAAGATTTACA+TGG - Chr3:34214148-34214167 None:intergenic 40.0%
GTTCAATTTCTTCAGAAGGG+TGG + Chr3:34215008-34215027 MsG0380013278.01.T01:intron 40.0%
TAAGATGTGCTCAGGCTTTA+CGG + Chr3:34213354-34213373 MsG0380013278.01.T01:CDS 40.0%
TACCATTGACACGTGAACAT+CGG + Chr3:34211437-34211456 MsG0380013278.01.T01:intron 40.0%
TACTAGTCAGAATGATTGCG+CGG - Chr3:34216913-34216932 None:intergenic 40.0%
TAGCACAAATGGCATGAAAG+AGG + Chr3:34215153-34215172 MsG0380013278.01.T01:CDS 40.0%
TAGTCATGTTCTTAAGACGC+GGG + Chr3:34212010-34212029 MsG0380013278.01.T01:intron 40.0%
TAGTTTCGCGACAAATGTCT+TGG + Chr3:34212727-34212746 MsG0380013278.01.T01:intron 40.0%
TCAAATGTTAAGACCGCTAC+AGG + Chr3:34214568-34214587 MsG0380013278.01.T01:intron 40.0%
TCAGGTACAGCATTTGTTCA+AGG + Chr3:34215986-34216005 MsG0380013278.01.T01:CDS 40.0%
TCCCAACAGAAACTGAATGT+AGG - Chr3:34213887-34213906 None:intergenic 40.0%
TGAGTACATTGGCGGAAAAA+AGG - Chr3:34215831-34215850 None:intergenic 40.0%
TGATTATCATGTTCGTGGAG+TGG + Chr3:34215179-34215198 MsG0380013278.01.T01:intron 40.0%
TGATTTGAGAATGATCCCAG+GGG + Chr3:34212250-34212269 MsG0380013278.01.T01:intron 40.0%
TGCGTCATGTGTTAACATGT+TGG + Chr3:34214955-34214974 MsG0380013278.01.T01:intron 40.0%
TGCTATCAGGTTTCCGTTAT+CGG + Chr3:34210998-34211017 MsG0380013278.01.T01:intron 40.0%
TGTGTTAAAGAGTCCCACAT+CGG + Chr3:34211311-34211330 MsG0380013278.01.T01:intron 40.0%
TTGAACAAATGCTGTACCTG+AGG - Chr3:34215987-34216006 None:intergenic 40.0%
TTGAGAAATGATGTGCTACC+TGG + Chr3:34214775-34214794 MsG0380013278.01.T01:intron 40.0%
! AAAGCTGGAAAGTATAGTGG+AGG + Chr3:34216652-34216671 MsG0380013278.01.T01:CDS 40.0%
! AGTATAGTGGAGGAATGAAG+AGG + Chr3:34216662-34216681 MsG0380013278.01.T01:CDS 40.0%
! ATGAAGCACTAACACAGACA+CGG + Chr3:34211404-34211423 MsG0380013278.01.T01:intron 40.0%
! ATTTGGCTCAGTCATAGGTA+TGG + Chr3:34214357-34214376 MsG0380013278.01.T01:intron 40.0%
! ATTTTTCTGTTAAGGCGGCA+TGG + Chr3:34216469-34216488 MsG0380013278.01.T01:intron 40.0%
! CATTCCGTAGGGTTAGTAAT+AGG - Chr3:34211750-34211769 None:intergenic 40.0%
! CCCAACCACAATTTCTAAGA+TGG + Chr3:34210937-34210956 MsG0380013278.01.T01:CDS 40.0%
! CCTAACCACCATTTCTAAGA+TGG + Chr3:34211177-34211196 MsG0380013278.01.T01:intron 40.0%
! CGGCTTTGATAGAATTGCAT+TGG + Chr3:34213622-34213641 MsG0380013278.01.T01:CDS 40.0%
! CTTTTACCGGAGATACTATG+GGG + Chr3:34215098-34215117 MsG0380013278.01.T01:CDS 40.0%
! GACAGAGTACACCAATTTTC+TGG + Chr3:34213032-34213051 MsG0380013278.01.T01:CDS 40.0%
! GGCGTATTTTTCTGTTAAGG+CGG + Chr3:34216464-34216483 MsG0380013278.01.T01:intron 40.0%
! GTCTTTTACCGGAGATACTA+TGG + Chr3:34215096-34215115 MsG0380013278.01.T01:CDS 40.0%
! GTGATATTTGGCTCAGTCAT+AGG + Chr3:34214352-34214371 MsG0380013278.01.T01:CDS 40.0%
! TTATGGCGTAAGGTTTTCTG+AGG + Chr3:34213377-34213396 MsG0380013278.01.T01:intron 40.0%
! TTGATAGAATTGCATTGGCG+CGG + Chr3:34213627-34213646 MsG0380013278.01.T01:CDS 40.0%
! TTTGACGTGGCTTCTCTTTT+AGG + Chr3:34213970-34213989 MsG0380013278.01.T01:CDS 40.0%
! TTTTCCGCCAATGTACTCAT+TGG + Chr3:34215832-34215851 MsG0380013278.01.T01:intron 40.0%
!! AGCCATTGTTTCTGCATAAG+GGG - Chr3:34211850-34211869 None:intergenic 40.0%
!! ATTGTTTCTGCATAAGGGGT+TGG - Chr3:34211846-34211865 None:intergenic 40.0%
!! GAGCCATTGTTTCTGCATAA+GGG - Chr3:34211851-34211870 None:intergenic 40.0%
!! TGAGCCATTGTTTCTGCATA+AGG - Chr3:34211852-34211871 None:intergenic 40.0%
!!! AGAGAGCACCTACTCTTTTA+TGG + Chr3:34216189-34216208 MsG0380013278.01.T01:CDS 40.0%
!!! AGTACGTTTTTTCTCCCTCA+TGG + Chr3:34216929-34216948 MsG0380013278.01.T01:CDS 40.0%
AACGGAAACCTGATAGCAGA+TGG - Chr3:34210996-34211015 None:intergenic 45.0%
AAGAGCTTCGGCTTAATGAC+AGG - Chr3:34212205-34212224 None:intergenic 45.0%
ACAAATGCTGTACCTGAGGT+TGG - Chr3:34215983-34216002 None:intergenic 45.0%
ACGCCACAAACTATTCGGTA+GGG - Chr3:34216449-34216468 None:intergenic 45.0%
ATGAGTCCCCATAGTATCTC+CGG - Chr3:34215107-34215126 None:intergenic 45.0%
ATGATGTGCTACCTGGTCAA+AGG + Chr3:34214782-34214801 MsG0380013278.01.T01:intron 45.0%
ATGCGTGGAGAATGAATGTG+GGG + Chr3:34211689-34211708 MsG0380013278.01.T01:intron 45.0%
ATTCCCTTCAGGCAAAGCAA+GGG - Chr3:34215702-34215721 None:intergenic 45.0%
CAGATCAACGAGATAACTGC+AGG + Chr3:34213447-34213466 MsG0380013278.01.T01:intron 45.0%
CATGCATAGCAGATGAAGCA+GGG - Chr3:34212391-34212410 None:intergenic 45.0%
CATGGTTTAAGGGATAAGGG+TGG + Chr3:34212407-34212426 MsG0380013278.01.T01:intron 45.0%
CTAACACAACCCCACAAAAC+CGG - Chr3:34210916-34210935 None:intergenic 45.0%
GAAAGCAGGCTCCAGAAAAT+TGG - Chr3:34213046-34213065 None:intergenic 45.0%
GACGCGGGTTTAATAGAATG+TGG + Chr3:34212025-34212044 MsG0380013278.01.T01:intron 45.0%
GATGCGTGGAGAATGAATGT+GGG + Chr3:34211688-34211707 MsG0380013278.01.T01:intron 45.0%
GCTATCAGGTTTCCGTTATC+GGG + Chr3:34210999-34211018 MsG0380013278.01.T01:intron 45.0%
GGATCAGGTGTTTGCAGTAA+AGG - Chr3:34211777-34211796 None:intergenic 45.0%
GGGGTTGCTGATAAAAAAGC+TGG + Chr3:34216637-34216656 MsG0380013278.01.T01:CDS 45.0%
GTCTCACATCGGATAAGAGA+TGG + Chr3:34210846-34210865 MsG0380013278.01.T01:CDS 45.0%
GTGTAAGGCTTGTCCTTATC+CGG + Chr3:34212357-34212376 MsG0380013278.01.T01:intron 45.0%
TAAGCAAAGTTTATCCGGGG+AGG + Chr3:34215641-34215660 MsG0380013278.01.T01:CDS 45.0%
TACACTTTAGACGGAGAAGG+TGG + Chr3:34215567-34215586 MsG0380013278.01.T01:intron 45.0%
TACGCCACAAACTATTCGGT+AGG - Chr3:34216450-34216469 None:intergenic 45.0%
TCAGGTGTTTGCAGTAAAGG+AGG - Chr3:34211774-34211793 None:intergenic 45.0%
TCTCTCACCGCAAATTTCTC+CGG - Chr3:34215674-34215693 None:intergenic 45.0%
TGCAAGCAAAACTGACCTCT+TGG - Chr3:34215380-34215399 None:intergenic 45.0%
TGGAGCCTATCCTGATATGA+CGG + Chr3:34212494-34212513 MsG0380013278.01.T01:intron 45.0%
TGTAAGGCTTGTCCTTATCC+GGG + Chr3:34212358-34212377 MsG0380013278.01.T01:intron 45.0%
TTTGCCTGAAGGGAATGCTT+TGG + Chr3:34215706-34215725 MsG0380013278.01.T01:intron 45.0%
! AGCCACGTCAAACTTTAAGG+GGG - Chr3:34213962-34213981 None:intergenic 45.0%
! AGCTTTAGCCGATCAGTTAG+GGG + Chr3:34212333-34212352 MsG0380013278.01.T01:intron 45.0%
! AGGCGGTCTCTTCTTTTCAT+GGG + Chr3:34213990-34214009 MsG0380013278.01.T01:CDS 45.0%
! ATAGTGGAGGAATGAAGAGG+AGG + Chr3:34216665-34216684 MsG0380013278.01.T01:CDS 45.0%
! ATCTGGAGCATGGACACAAA+TGG - Chr3:34211032-34211051 None:intergenic 45.0%
! CATTCCAAAGCATTCCCTTC+AGG - Chr3:34215713-34215732 None:intergenic 45.0%
! CTCTCTTTACAGTCTTGTCG+AGG + Chr3:34212657-34212676 MsG0380013278.01.T01:intron 45.0%
! GAGCTTTAGCCGATCAGTTA+GGG + Chr3:34212332-34212351 MsG0380013278.01.T01:intron 45.0%
! TAGGCGGTCTCTTCTTTTCA+TGG + Chr3:34213989-34214008 MsG0380013278.01.T01:CDS 45.0%
! TGAGCTTTAGCCGATCAGTT+AGG + Chr3:34212331-34212350 MsG0380013278.01.T01:intron 45.0%
! TTTGGAATGCTTGGTCCCAA+TGG + Chr3:34215724-34215743 MsG0380013278.01.T01:intron 45.0%
!! AATGGTGGATGACCCGATAA+CGG - Chr3:34211014-34211033 None:intergenic 45.0%
!! AGGGAATGCTTTGGAATGCT+TGG + Chr3:34215715-34215734 MsG0380013278.01.T01:intron 45.0%
!! GGAAGCTCTGAAAAGAAAGC+AGG - Chr3:34213060-34213079 None:intergenic 45.0%
!! TTTGGCACTGGTCTATTAGC+TGG + Chr3:34214698-34214717 MsG0380013278.01.T01:intron 45.0%
AAAATGCACGGTCTCGGTGA+TGG + Chr3:34214265-34214284 MsG0380013278.01.T01:CDS 50.0%
AAACCGCTTTGCCCTTAAGC+AGG - Chr3:34212543-34212562 None:intergenic 50.0%
AAATGCACGGTCTCGGTGAT+GGG + Chr3:34214266-34214285 MsG0380013278.01.T01:CDS 50.0%
AAGCCTAGTCTCCAAAGGCA+AGG + Chr3:34215316-34215335 MsG0380013278.01.T01:intron 50.0%
AGTAAAGGAGGCCATTCCGT+AGG - Chr3:34211762-34211781 None:intergenic 50.0%
AGTCCTGCTTAAGGGCAAAG+CGG + Chr3:34212537-34212556 MsG0380013278.01.T01:intron 50.0%
ATGAAGCAGGGAGAGATACC+CGG - Chr3:34212379-34212398 None:intergenic 50.0%
ATGCTCCAGATGTCCAGTCT+TGG + Chr3:34211041-34211060 MsG0380013278.01.T01:intron 50.0%
ATTCCAGCTTACTCGTGCTG+AGG - Chr3:34216064-34216083 None:intergenic 50.0%
ATTTAACATGCTGCAGGCGG+TGG + Chr3:34216579-34216598 MsG0380013278.01.T01:intron 50.0%
CAAACTATTCGGTAGGGAGG+AGG - Chr3:34216443-34216462 None:intergenic 50.0%
CAAAGTTTATCCGGGGAGGA+TGG + Chr3:34215645-34215664 MsG0380013278.01.T01:CDS 50.0%
CAAGCACGAGTCCTGCTTAA+GGG + Chr3:34212529-34212548 MsG0380013278.01.T01:intron 50.0%
CAGCAACCCCTCCATGAAAA+AGG - Chr3:34216627-34216646 None:intergenic 50.0%
CATTCCCTTCAGGCAAAGCA+AGG - Chr3:34215703-34215722 None:intergenic 50.0%
CCACAAACTATTCGGTAGGG+AGG - Chr3:34216446-34216465 None:intergenic 50.0%
CCACGATATAAGGCAAACCC+GGG - Chr3:34215055-34215074 None:intergenic 50.0%
CCATGCATAGCAGATGAAGC+AGG - Chr3:34212392-34212411 None:intergenic 50.0%
CCCACGATATAAGGCAAACC+CGG - Chr3:34215056-34215075 None:intergenic 50.0%
CCGGGTTTGCCTTATATCGT+GGG + Chr3:34215053-34215072 MsG0380013278.01.T01:CDS 50.0%
CCTCCCTACCGAATAGTTTG+TGG + Chr3:34216443-34216462 MsG0380013278.01.T01:intron 50.0%
CCTGATAGAAGGTGGCCTAA+CGG - Chr3:34211224-34211243 None:intergenic 50.0%
CCTGCTTCATCTGCTATGCA+TGG + Chr3:34212389-34212408 MsG0380013278.01.T01:intron 50.0%
CTAACACAACCCCACAAGAC+CGG - Chr3:34211156-34211175 None:intergenic 50.0%
CTAGCGGTCGATATCTGAAC+AGG - Chr3:34213132-34213151 None:intergenic 50.0%
CTATGGGGACTCATGGTATG+CGG + Chr3:34215113-34215132 MsG0380013278.01.T01:CDS 50.0%
CTTAAGCAGGACTCGTGCTT+GGG - Chr3:34212530-34212549 None:intergenic 50.0%
CTTACACGCCCCTAACTGAT+CGG - Chr3:34212344-34212363 None:intergenic 50.0%
GACCCCCTTAAAGTTTGACG+TGG + Chr3:34213957-34213976 MsG0380013278.01.T01:CDS 50.0%
GCAATTCTCACCTCACAAGC+CGG + Chr3:34211134-34211153 MsG0380013278.01.T01:intron 50.0%
GCAGGGTCTAATCCAGTACT+TGG - Chr3:34216845-34216864 None:intergenic 50.0%
GGAGATACTATGGGGACTCA+TGG + Chr3:34215106-34215125 MsG0380013278.01.T01:CDS 50.0%
GGATGCGTGGAGAATGAATG+TGG + Chr3:34211687-34211706 MsG0380013278.01.T01:intron 50.0%
GGCTTTACGGTTATGGCGTA+AGG + Chr3:34213367-34213386 MsG0380013278.01.T01:intron 50.0%
GGTCTTACAAAGCCAACCTC+AGG + Chr3:34215968-34215987 MsG0380013278.01.T01:CDS 50.0%
GTAAAGGAGGCCATTCCGTA+GGG - Chr3:34211761-34211780 None:intergenic 50.0%
GTGCTCAGGCTTTACGGTTA+TGG + Chr3:34213360-34213379 MsG0380013278.01.T01:CDS 50.0%
GTGGACCGTCATATCAGGAT+AGG - Chr3:34212502-34212521 None:intergenic 50.0%
TGCCGATGTTCACGTGTCAA+TGG - Chr3:34211442-34211461 None:intergenic 50.0%
TGCTCCAGATGTCCAGTCTT+GGG + Chr3:34211042-34211061 MsG0380013278.01.T01:intron 50.0%
TGGAGCATGGACACAAATGG+TGG - Chr3:34211029-34211048 None:intergenic 50.0%
TGTCCCTCACTATGCTTCAC+TGG + Chr3:34211872-34211891 MsG0380013278.01.T01:CDS 50.0%
TGTCCCTTGCTTTGCCTGAA+GGG + Chr3:34215696-34215715 MsG0380013278.01.T01:intron 50.0%
TTAAGCAGGACTCGTGCTTG+GGG - Chr3:34212529-34212548 None:intergenic 50.0%
TTCCAGCTTACTCGTGCTGA+GGG - Chr3:34216063-34216082 None:intergenic 50.0%
TTCGGAAGCCTAGTCTCCAA+AGG + Chr3:34215311-34215330 MsG0380013278.01.T01:intron 50.0%
TTGTCCCTTGCTTTGCCTGA+AGG + Chr3:34215695-34215714 MsG0380013278.01.T01:intron 50.0%
! AAGACTGGACATCTGGAGCA+TGG - Chr3:34211042-34211061 None:intergenic 50.0%
! GACGTGGCTTCTCTTTTAGG+CGG + Chr3:34213973-34213992 MsG0380013278.01.T01:CDS 50.0%
! GATCCTTGCCTTTGGAGACT+AGG - Chr3:34215322-34215341 None:intergenic 50.0%
! TCAAACTTTAAGGGGGTCCC+AGG - Chr3:34213955-34213974 None:intergenic 50.0%
! TTTAAGGGGGTCCCAGGTTT+TGG - Chr3:34213949-34213968 None:intergenic 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG + Chr3:34210914-34210933 MsG0380013278.01.T01:CDS 50.0%
AGCCTCCTCCATGATCCGTT+AGG + Chr3:34210970-34210989 MsG0380013278.01.T01:intron 55.0%
AGCCTCCTCCATGATCCGTT+GGG + Chr3:34210970-34210989 MsG0380013278.01.T01:intron 55.0%
ATGCTCCAGATGTCCAGTCC+TGG + Chr3:34211277-34211296 MsG0380013278.01.T01:intron 55.0%
ATGCTTGGTCCCAATGGTGC+TGG + Chr3:34215730-34215749 MsG0380013278.01.T01:intron 55.0%
ATGTCCAGTCTTGGGCGTGA+GGG + Chr3:34211050-34211069 MsG0380013278.01.T01:intron 55.0%
CAGGGAGAGATACCCGGATA+AGG - Chr3:34212373-34212392 None:intergenic 55.0%
CATACCTTGCTGCACGCTAG+CGG - Chr3:34213148-34213167 None:intergenic 55.0%
CCAAGCACGAGTCCTGCTTA+AGG + Chr3:34212528-34212547 MsG0380013278.01.T01:intron 55.0%
CCCGGGTTTGCCTTATATCG+TGG + Chr3:34215052-34215071 MsG0380013278.01.T01:CDS 55.0%
CCGTTAGGCCACCTTCTATC+AGG + Chr3:34211221-34211240 MsG0380013278.01.T01:intron 55.0%
CCTGATAGCAGATGGCCCAA+CGG - Chr3:34210988-34211007 None:intergenic 55.0%
CCTTAAGCAGGACTCGTGCT+TGG - Chr3:34212531-34212550 None:intergenic 55.0%
GTTCTAACAGCGCGGTATCG+TGG - Chr3:34211798-34211817 None:intergenic 55.0%
TAAGCAGGACTCGTGCTTGG+GGG - Chr3:34212528-34212547 None:intergenic 55.0%
TATCCGGGGAGGATGGTAAC+CGG + Chr3:34215652-34215671 MsG0380013278.01.T01:intron 55.0%
TGCTCCAGATGTCCAGTCCT+GGG + Chr3:34211278-34211297 MsG0380013278.01.T01:intron 55.0%
TGCTTGGTCCCAATGGTGCT+GGG + Chr3:34215731-34215750 MsG0380013278.01.T01:intron 55.0%
! ACCTCACAAGCCGGTCTTGT+GGG + Chr3:34211143-34211162 MsG0380013278.01.T01:intron 55.0%
! AGGACTGGACATCTGGAGCA+TGG - Chr3:34211278-34211297 None:intergenic 55.0%
! ATGATGCAGCACTGGAGCCA+AGG + Chr3:34213799-34213818 MsG0380013278.01.T01:intron 55.0%
! CGATCAGTTAGGGGCGTGTA+AGG + Chr3:34212342-34212361 MsG0380013278.01.T01:intron 55.0%
! CGGTCTTGTGGGGTTGTGTT+AGG + Chr3:34211154-34211173 MsG0380013278.01.T01:intron 55.0%
! GAAGGTGGCCTAACGGATCA+TGG - Chr3:34211217-34211236 None:intergenic 55.0%
!! GTCTCGGTGATGGGCCATAT+TGG + Chr3:34214275-34214294 MsG0380013278.01.T01:CDS 55.0%
AAGCAGGACTCGTGCTTGGG+GGG - Chr3:34212527-34212546 None:intergenic 60.0%
ACAGCGCGGTATCGTGGATC+AGG - Chr3:34211792-34211811 None:intergenic 60.0%
ATGTCCAGTCCTGGGCGTGA+GGG + Chr3:34211286-34211305 MsG0380013278.01.T01:intron 60.0%
CACAACCCCACAAAACCGGC+TGG - Chr3:34210912-34210931 None:intergenic 60.0%
CACCTCACAAGCCGGTCTTG+TGG + Chr3:34211142-34211161 MsG0380013278.01.T01:intron 60.0%
CACGCCCAAGACTGGACATC+TGG - Chr3:34211049-34211068 None:intergenic 60.0%
CCGTTGGGCCATCTGCTATC+AGG + Chr3:34210985-34211004 MsG0380013278.01.T01:intron 60.0%
GAGCCTCCTCCATGATCCGT+TGG + Chr3:34210969-34210988 MsG0380013278.01.T01:intron 60.0%
GATGGCCCAACGGATCATGG+AGG - Chr3:34210978-34210997 None:intergenic 60.0%
GATGTCCAGTCTTGGGCGTG+AGG + Chr3:34211049-34211068 MsG0380013278.01.T01:intron 60.0%
GCAGATGGCCCAACGGATCA+TGG - Chr3:34210981-34211000 None:intergenic 60.0%
GGGACTCATGGTATGCGGTG+GGG + Chr3:34215118-34215137 MsG0380013278.01.T01:CDS 60.0%
GGGCTGTGGACCGTCATATC+AGG - Chr3:34212507-34212526 None:intergenic 60.0%
GGGGACTCATGGTATGCGGT+GGG + Chr3:34215117-34215136 MsG0380013278.01.T01:CDS 60.0%
TAACACACACCCTCACGCCC+AGG - Chr3:34211062-34211081 None:intergenic 60.0%
TCTCCGGTTACCATCCTCCC+CGG - Chr3:34215658-34215677 None:intergenic 60.0%
TGCCCTCAGCACGAGTAAGC+TGG + Chr3:34216058-34216077 MsG0380013278.01.T01:intron 60.0%
TGGGGACTCATGGTATGCGG+TGG + Chr3:34215116-34215135 MsG0380013278.01.T01:CDS 60.0%
! CCTCACAAGCCGGTCTTGTG+GGG + Chr3:34211144-34211163 MsG0380013278.01.T01:intron 60.0%
! GCGAGTAAAGCGGGGAGTGT+TGG + Chr3:34214049-34214068 MsG0380013278.01.T01:intron 60.0%
! GGCCTAACGGATCATGGAGG+AGG - Chr3:34211211-34211230 None:intergenic 60.0%
! GGTGGCCTAACGGATCATGG+AGG - Chr3:34211214-34211233 None:intergenic 60.0%
!! CCTCACCAGCCGGTTTTGTG+GGG + Chr3:34210904-34210923 MsG0380013278.01.T01:CDS 60.0%
!! GCCTCACCAGCCGGTTTTGT+GGG + Chr3:34210903-34210922 MsG0380013278.01.T01:CDS 60.0%
CAAAACCGGCTGGTGAGGCG+AGG - Chr3:34210902-34210921 None:intergenic 65.0%
CACACCCTCACGCCCAAGAC+TGG - Chr3:34211057-34211076 None:intergenic 65.0%
CACGCCCAGGACTGGACATC+TGG - Chr3:34211285-34211304 None:intergenic 65.0%
CCCCACAAAACCGGCTGGTG+AGG - Chr3:34210907-34210926 None:intergenic 65.0%
GATGTCCAGTCCTGGGCGTG+AGG + Chr3:34211285-34211304 MsG0380013278.01.T01:intron 65.0%
GCAATCCTCGCCTCACCAGC+CGG + Chr3:34210894-34210913 MsG0380013278.01.T01:CDS 65.0%
GGCCCAACGGATCATGGAGG+AGG - Chr3:34210975-34210994 None:intergenic 65.0%
TCGACCGCTAGCGTGCAGCA+AGG + Chr3:34213141-34213160 MsG0380013278.01.T01:CDS 65.0%
! GGTGGCACGTGCTGCTCTAG+TGG + Chr3:34212425-34212444 MsG0380013278.01.T01:intron 65.0%
!! CCCCACAAGACCGGCTTGTG+AGG - Chr3:34211147-34211166 None:intergenic 65.0%
!! CGCCTCACCAGCCGGTTTTG+TGG + Chr3:34210902-34210921 MsG0380013278.01.T01:CDS 65.0%
CACACCCTCACGCCCAGGAC+TGG - Chr3:34211293-34211312 None:intergenic 70.0%
GACTCGTGCTTGGGGGGCTG+TGG - Chr3:34212521-34212540 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 34210836 34216958 34210836 ID=MsG0380013278.01;Name=MsG0380013278.01
Chr3 mRNA 34210836 34216958 34210836 ID=MsG0380013278.01.T01;Parent=MsG0380013278.01;Name=MsG0380013278.01.T01;_AED=0.39;_eAED=0.40;_QI=0|0.38|0.5|0.92|0.92|0.78|14|0|580
Chr3 exon 34210836 34210962 34210836 ID=MsG0380013278.01.T01:exon:5224;Parent=MsG0380013278.01.T01
Chr3 exon 34211570 34211632 34211570 ID=MsG0380013278.01.T01:exon:5223;Parent=MsG0380013278.01.T01
Chr3 exon 34211736 34211893 34211736 ID=MsG0380013278.01.T01:exon:5222;Parent=MsG0380013278.01.T01
Chr3 exon 34213018 34213162 34213018 ID=MsG0380013278.01.T01:exon:5221;Parent=MsG0380013278.01.T01
Chr3 exon 34213279 34213383 34213279 ID=MsG0380013278.01.T01:exon:5220;Parent=MsG0380013278.01.T01
Chr3 exon 34213546 34213670 34213546 ID=MsG0380013278.01.T01:exon:5219;Parent=MsG0380013278.01.T01
Chr3 exon 34213874 34214032 34213874 ID=MsG0380013278.01.T01:exon:5218;Parent=MsG0380013278.01.T01
Chr3 exon 34214211 34214373 34214211 ID=MsG0380013278.01.T01:exon:5217;Parent=MsG0380013278.01.T01
Chr3 exon 34215023 34215174 34215023 ID=MsG0380013278.01.T01:exon:5216;Parent=MsG0380013278.01.T01
Chr3 exon 34215577 34215666 34215577 ID=MsG0380013278.01.T01:exon:5215;Parent=MsG0380013278.01.T01
Chr3 exon 34215962 34216071 34215962 ID=MsG0380013278.01.T01:exon:5214;Parent=MsG0380013278.01.T01
Chr3 exon 34216167 34216248 34216167 ID=MsG0380013278.01.T01:exon:5213;Parent=MsG0380013278.01.T01
Chr3 exon 34216595 34216723 34216595 ID=MsG0380013278.01.T01:exon:5212;Parent=MsG0380013278.01.T01
Chr3 exon 34216824 34216958 34216824 ID=MsG0380013278.01.T01:exon:5211;Parent=MsG0380013278.01.T01
Chr3 CDS 34210836 34210962 34210836 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34211570 34211632 34211570 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34211736 34211893 34211736 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34213018 34213162 34213018 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34213279 34213383 34213279 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34213546 34213670 34213546 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34213874 34214032 34213874 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34214211 34214373 34214211 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34215023 34215174 34215023 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34215577 34215666 34215577 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34215962 34216071 34215962 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34216167 34216248 34216167 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34216595 34216723 34216595 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Chr3 CDS 34216824 34216958 34216824 ID=MsG0380013278.01.T01:cds;Parent=MsG0380013278.01.T01
Gene Sequence

>MsG0380013278.01.T01

ATGTTAAAGAGTCTCACATCGGATAAGAGATGGCCTGACAATGTGTTTATAAGTGGGGGCAATCCTCGCCTCACCAGCCGGTTTTGTGGGGTTGTGTTAGGCCCAACCACAATTTCTAAGATGGATGAAACGAAATGTGAAGACAAACGTAAGGCTGATCTTGTTCCCATTTGTGCTGTGTATATTGCTGTTGGCGCTTGTCCTATTACTAACCCTACGGAATGGCCTCCTTTACTGCAAACACCTGATCCACGATACCGCGCTGTTAGAACGTATTTTCTTCCGTTTTCTGATTTTCCAACCCCTTATGCAGAAACAATGGCTCATGTCCCTCACTATGCTTCACTGGGATCGTCATCAGAGACAGAGTACACCAATTTTCTGGAGCCTGCTTTCTTTTCAGAGCTTCCCATTTACTATCTACAAAGTCAGTGCGGAAAGAACTCTACATTGTCTGTTCCTGTTCAGATATCGACCGCTAGCGTGCAGCAAGGTTATGCTAATAGTTTACATCTGATGTCCAAGTTTGTACTAATTCTAGTTTATTGTTTTCCACTGGATATAGAGTTAAGATGTGCTCAGGCTTTACGGTTATGGCGCTATGATTTTCTAAATTCAAATGAGAATATATTTAATGTCAGTATATGGTACAACTCAACCTATAAAAATGACACCGGCTTTGATAGAATTGCATTGGCGCGGATTCCTCGTTCTGTAAATTTGGTATCAAATTCCTACATTCAGTTTCTGTTGGGATCTGGTACCAAAATGTTGTTTGAGTTTGTAAAGGAAATGCCAAAACCTGGGACCCCCTTAAAGTTTGACGTGGCTTCTCTTTTAGGCGGTCTCTTCTTTTCATGGGTCATCCTGCAACTTTTTCCTGTTGCCCTCACATCATTAGTTTATGAGAAGCAACAAAATTTAAGAATCATGATGAAAATGCACGGTCTCGGTGATGGGCCATATTGGATCATTTCTTACAGTTATTTTCTTGCCATATCAGTTATCTACATGCTGTGTTTTGTGATATTTGGCTCAGTCATAGAAGGGTGGATCATTGTTATGGAGTTATATCCCGGGTTTGCCTTATATCGTGGGTTATATGAATTTTCACAATCGTCTTTTACCGGAGATACTATGGGGACTCATGGTATGCGGTGGGGAGATCTCAATGATAGCACAAATGGCATGAAAGAGACGGAGAAGGTGGAGCAGCTGCTACTTGAACCTACTATGAATCATGCAATCATTTGTGACAAACTAAGCAAAGTTTATCCGGGGAGGATGATGATAGGTCTTACAAAGCCAACCTCAGGTACAGCATTTGTTCAAGGTCTTGACATAAGAACGGATATGAATGGAATATATACTAGCATGGGCGTATGCCCTCAGCACGACTTGCTGGGGAAATTTGACAGAAGAGAGCACCTACTCTTTTATGGCAGACTTAAAAATCTTAAAGGTTCCGCCTTAACACAAGCGGTGGAAGAATCTTTGAAAAGTGTAAACCTTTTTCATGGAGGGGTTGCTGATAAAAAAGCTGGAAAGTATAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGAGATCCTAGGGTTGTTTATATGGATGAACCAAGTACTGGATTAGACCCTGCGTCAAGAAAGAACTTATGGAATGTTGTTAATCGTGCAAAACAGGACCGCGCAATCATTCTGACTAGTACGTTTTTTCTCCCTCATGGTTTTTGA

Protein sequence

>MsG0380013278.01.T01

MLKSLTSDKRWPDNVFISGGNPRLTSRFCGVVLGPTTISKMDETKCEDKRKADLVPICAVYIAVGACPITNPTEWPPLLQTPDPRYRAVRTYFLPFSDFPTPYAETMAHVPHYASLGSSSETEYTNFLEPAFFSELPIYYLQSQCGKNSTLSVPVQISTASVQQGYANSLHLMSKFVLILVYCFPLDIELRCAQALRLWRYDFLNSNENIFNVSIWYNSTYKNDTGFDRIALARIPRSVNLVSNSYIQFLLGSGTKMLFEFVKEMPKPGTPLKFDVASLLGGLFFSWVILQLFPVALTSLVYEKQQNLRIMMKMHGLGDGPYWIISYSYFLAISVIYMLCFVIFGSVIEGWIIVMELYPGFALYRGLYEFSQSSFTGDTMGTHGMRWGDLNDSTNGMKETEKVEQLLLEPTMNHAIICDKLSKVYPGRMMIGLTKPTSGTAFVQGLDIRTDMNGIYTSMGVCPQHDLLGKFDRREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRKNLWNVVNRAKQDRAIILTSTFFLPHGF*