Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009169.01.T01 | XP_013443470.1 | 84.436 | 257 | 6 | 1 | 1 | 223 | 1 | 257 | 1.08E-148 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009169.01.T01 | Q9SLN8 | 42.188 | 256 | 109 | 3 | 2 | 223 | 4 | 254 | 3.69E-66 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009169.01.T01 | A0A072TVD7 | 84.436 | 257 | 6 | 1 | 1 | 223 | 1 | 257 | 5.16e-149 | 428 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0280009169.01 | 0.825718 | 4.023181e-54 | 3.696514e-51 |
| MsG0080048820.01 | MsG0280009169.01 | 0.801169 | 1.022059e-48 | 4.848033e-46 |
| MsG0080048845.01 | MsG0280009169.01 | 0.805259 | 1.455473e-49 | 7.664410e-47 |
| MsG0080049002.01 | MsG0280009169.01 | 0.846054 | 2.763580e-59 | 4.697917e-56 |
| MsG0180000241.01 | MsG0280009169.01 | 0.801494 | 8.768949e-49 | 4.193711e-46 |
| MsG0180000489.01 | MsG0280009169.01 | 0.816632 | 5.003926e-52 | 3.564490e-49 |
| MsG0180000599.01 | MsG0280009169.01 | 0.816712 | 4.801732e-52 | 3.427977e-49 |
| MsG0180000646.01 | MsG0280009169.01 | 0.838952 | 2.117587e-57 | 2.881020e-54 |
| MsG0180000647.01 | MsG0280009169.01 | 0.843260 | 1.562940e-58 | 2.431663e-55 |
| MsG0180000843.01 | MsG0280009169.01 | 0.809268 | 2.058322e-50 | 1.203028e-47 |
| MsG0180001105.01 | MsG0280009169.01 | 0.827298 | 1.690148e-54 | 1.625091e-51 |
| MsG0180001371.01 | MsG0280009169.01 | 0.805190 | 1.504816e-49 | 7.910516e-47 |
| MsG0180001610.01 | MsG0280009169.01 | 0.841692 | 4.073542e-58 | 6.032440e-55 |
| MsG0180002399.01 | MsG0280009169.01 | 0.805889 | 1.073458e-49 | 5.745440e-47 |
| MsG0180002700.01 | MsG0280009169.01 | 0.809419 | 1.910342e-50 | 1.121089e-47 |
| MsG0180003906.01 | MsG0280009169.01 | 0.810097 | 1.365610e-50 | 8.158406e-48 |
| MsG0180004017.01 | MsG0280009169.01 | 0.842884 | 1.968572e-58 | 3.026421e-55 |
| MsG0180004103.01 | MsG0280009169.01 | 0.844532 | 7.132997e-59 | 1.155008e-55 |
| MsG0180004106.01 | MsG0280009169.01 | 0.802947 | 4.404780e-49 | 2.185771e-46 |
| MsG0180004164.01 | MsG0280009169.01 | 0.822793 | 1.958449e-53 | 1.655872e-50 |
| MsG0180004246.01 | MsG0280009169.01 | 0.842782 | 2.095411e-58 | 3.211145e-55 |
| MsG0180004277.01 | MsG0280009169.01 | 0.866393 | 2.945539e-65 | 9.911935e-62 |
| MsG0180004516.01 | MsG0280009169.01 | 0.808041 | 3.763027e-50 | 2.129190e-47 |
| MsG0180004518.01 | MsG0280009169.01 | 0.838934 | 2.141310e-57 | 2.911746e-54 |
| MsG0180004814.01 | MsG0280009169.01 | 0.822546 | 2.235541e-53 | 1.877046e-50 |
| MsG0180004934.01 | MsG0280009169.01 | 0.801557 | 8.514210e-49 | 4.078212e-46 |
| MsG0180004988.01 | MsG0280009169.01 | 0.848060 | 7.797189e-60 | 1.413343e-56 |
| MsG0180005803.01 | MsG0280009169.01 | 0.837223 | 5.900849e-57 | 7.613960e-54 |
| MsG0180005807.01 | MsG0280009169.01 | 0.818358 | 2.043869e-52 | 1.526616e-49 |
| MsG0180005829.01 | MsG0280009169.01 | 0.806723 | 7.163571e-50 | 3.916658e-47 |
| MsG0180006035.01 | MsG0280009169.01 | 0.809873 | 1.525518e-50 | 9.060651e-48 |
| MsG0180006136.01 | MsG0280009169.01 | 0.803776 | 2.966144e-49 | 1.503557e-46 |
| MsG0280006587.01 | MsG0280009169.01 | 0.844089 | 9.378396e-59 | 1.497636e-55 |
| MsG0280006706.01 | MsG0280009169.01 | 0.813945 | 1.979515e-51 | 1.310541e-48 |
| MsG0280006718.01 | MsG0280009169.01 | 0.803041 | 4.211303e-49 | 2.094791e-46 |
| MsG0280006996.01 | MsG0280009169.01 | 0.850342 | 1.807145e-60 | 3.528554e-57 |
| MsG0280007754.01 | MsG0280009169.01 | 0.824526 | 7.695740e-54 | 6.834000e-51 |
| MsG0280007976.01 | MsG0280009169.01 | 0.800780 | 1.227539e-48 | 5.765323e-46 |
| MsG0280008165.01 | MsG0280009169.01 | 0.805465 | 1.317531e-49 | 6.975425e-47 |
| MsG0280008709.01 | MsG0280009169.01 | 0.835146 | 1.988421e-56 | 2.410231e-53 |
| MsG0280008942.01 | MsG0280009169.01 | 0.815707 | 8.054611e-52 | 5.594518e-49 |
| MsG0280009169.01 | MsG0280009435.01 | 0.808864 | 2.511746e-50 | 1.452259e-47 |
| MsG0280009169.01 | MsG0280009436.01 | 0.803220 | 3.867411e-49 | 1.932598e-46 |
| MsG0280009169.01 | MsG0280009756.01 | 0.831057 | 2.071542e-55 | 2.222727e-52 |
| MsG0280009169.01 | MsG0280009869.01 | 0.831914 | 1.273785e-55 | 1.402105e-52 |
| MsG0280009169.01 | MsG0280009953.01 | 0.848104 | 7.579628e-60 | 1.375808e-56 |
| MsG0280009169.01 | MsG0280009954.01 | 0.812621 | 3.865674e-51 | 2.469768e-48 |
| MsG0280009169.01 | MsG0280010236.01 | 0.802338 | 5.883742e-49 | 2.874897e-46 |
| MsG0280009169.01 | MsG0280010353.01 | 0.809238 | 2.088893e-50 | 1.219985e-47 |
| MsG0280009169.01 | MsG0280010675.01 | 0.802720 | 4.906583e-49 | 2.420911e-46 |
| MsG0280009169.01 | MsG0280010975.01 | 0.801950 | 7.068715e-49 | 3.419752e-46 |
| MsG0280009169.01 | MsG0280011110.01 | -0.823220 | 1.557666e-53 | 1.332927e-50 |
| MsG0280009169.01 | MsG0280011255.01 | 0.807777 | 4.283506e-50 | 2.406941e-47 |
| MsG0280009169.01 | MsG0280011272.01 | -0.808883 | 2.488496e-50 | 1.439488e-47 |
| MsG0280009169.01 | MsG0280011411.01 | 0.801887 | 7.282862e-49 | 3.517943e-46 |
| MsG0280009169.01 | MsG0380012567.01 | 0.849340 | 3.443988e-60 | 6.508940e-57 |
| MsG0280009169.01 | MsG0380013373.01 | 0.835048 | 2.104737e-56 | 2.543725e-53 |
| MsG0280009169.01 | MsG0380014386.01 | 0.835291 | 1.828248e-56 | 2.226071e-53 |
| MsG0280009169.01 | MsG0380014464.01 | 0.811562 | 6.579333e-51 | 4.086017e-48 |
| MsG0280009169.01 | MsG0380014530.01 | 0.804039 | 2.616046e-49 | 1.335101e-46 |
| MsG0280009169.01 | MsG0380014794.01 | 0.841076 | 5.915506e-58 | 8.593275e-55 |
| MsG0280009169.01 | MsG0380014909.01 | 0.842688 | 2.219193e-58 | 3.391005e-55 |
| MsG0280009169.01 | MsG0380015372.01 | 0.807519 | 4.859229e-50 | 2.712273e-47 |
| MsG0280009169.01 | MsG0380015486.01 | 0.821977 | 3.030498e-53 | 2.503227e-50 |
| MsG0280009169.01 | MsG0380015501.01 | 0.833066 | 6.602079e-56 | 7.519547e-53 |
| MsG0280009169.01 | MsG0380015784.01 | 0.811939 | 5.447548e-51 | 3.417016e-48 |
| MsG0280009169.01 | MsG0380015896.01 | 0.855629 | 5.549610e-62 | 1.289358e-58 |
| MsG0280009169.01 | MsG0380015897.01 | 0.805175 | 1.515132e-49 | 7.962035e-47 |
| MsG0280009169.01 | MsG0380015921.01 | 0.818455 | 1.943101e-52 | 1.455288e-49 |
| MsG0280009169.01 | MsG0380016294.01 | 0.823833 | 1.119505e-53 | 9.748048e-51 |
| MsG0280009169.01 | MsG0380016764.01 | 0.835215 | 1.909835e-56 | 2.320083e-53 |
| MsG0280009169.01 | MsG0380017329.01 | 0.807563 | 4.755475e-50 | 2.657239e-47 |
| MsG0280009169.01 | MsG0380017931.01 | 0.800605 | 1.332367e-48 | 6.230259e-46 |
| MsG0280009169.01 | MsG0380018037.01 | 0.830646 | 2.612483e-55 | 2.769261e-52 |
| MsG0280009169.01 | MsG0380018069.01 | 0.800576 | 1.350799e-48 | 6.311767e-46 |
| MsG0280009169.01 | MsG0480018323.01 | 0.820441 | 6.847586e-53 | 5.418769e-50 |
| MsG0280009169.01 | MsG0480018324.01 | 0.801748 | 7.776803e-49 | 3.743036e-46 |
| MsG0280009169.01 | MsG0480018584.01 | 0.819965 | 8.800769e-53 | 6.873091e-50 |
| MsG0280009169.01 | MsG0480018910.01 | 0.814894 | 1.220924e-51 | 8.293338e-49 |
| MsG0280009169.01 | MsG0480020229.01 | 0.864708 | 1.001423e-64 | 3.174284e-61 |
| MsG0280009169.01 | MsG0480020363.01 | 0.807494 | 4.917944e-50 | 2.743287e-47 |
| MsG0280009169.01 | MsG0480020690.01 | 0.802046 | 6.754979e-49 | 3.276036e-46 |
| MsG0280009169.01 | MsG0480021060.01 | 0.817387 | 3.386712e-52 | 2.462997e-49 |
| MsG0280009169.01 | MsG0480021207.01 | 0.806749 | 7.072030e-50 | 3.869182e-47 |
| MsG0280009169.01 | MsG0480021248.01 | 0.805602 | 1.233250e-49 | 6.551942e-47 |
| MsG0280009169.01 | MsG0480021294.01 | 0.808974 | 2.378722e-50 | 1.379385e-47 |
| MsG0280009169.01 | MsG0480021406.01 | 0.803692 | 3.087330e-49 | 1.561629e-46 |
| MsG0280009169.01 | MsG0480022491.01 | -0.801058 | 1.076921e-48 | 5.094227e-46 |
| MsG0280009169.01 | MsG0480022624.01 | 0.815475 | 9.072944e-52 | 6.262157e-49 |
| MsG0280009169.01 | MsG0480022994.01 | 0.817176 | 3.777997e-52 | 2.731600e-49 |
| MsG0280009169.01 | MsG0480023150.01 | 0.806084 | 9.767434e-50 | 5.253836e-47 |
| MsG0280009169.01 | MsG0480023166.01 | 0.815360 | 9.618922e-52 | 6.617680e-49 |
| MsG0280009169.01 | MsG0480023190.01 | 0.836996 | 6.741886e-57 | 8.640485e-54 |
| MsG0280009169.01 | MsG0480023498.01 | 0.800868 | 1.177917e-48 | 5.544925e-46 |
| MsG0280009169.01 | MsG0480023821.01 | 0.808436 | 3.100044e-50 | 1.772521e-47 |
| MsG0280009169.01 | MsG0480023845.01 | 0.824596 | 7.409100e-54 | 6.593427e-51 |
| MsG0280009169.01 | MsG0480023890.01 | 0.837632 | 4.634236e-57 | 6.056486e-54 |
| MsG0280009169.01 | MsG0580024628.01 | 0.819449 | 1.154718e-52 | 8.888821e-50 |
| MsG0280009169.01 | MsG0580024717.01 | 0.800164 | 1.638705e-48 | 7.577007e-46 |
| MsG0280009169.01 | MsG0580024759.01 | 0.840455 | 8.608316e-58 | 1.226839e-54 |
| MsG0280009169.01 | MsG0580024843.01 | 0.812960 | 3.259444e-51 | 2.100986e-48 |
| MsG0280009169.01 | MsG0580025055.01 | 0.808288 | 3.333538e-50 | 1.898609e-47 |
| MsG0280009169.01 | MsG0580025845.01 | 0.821352 | 4.225313e-53 | 3.429345e-50 |
| MsG0280009169.01 | MsG0580026271.01 | 0.833545 | 5.014670e-56 | 5.793797e-53 |
| MsG0280009169.01 | MsG0580027394.01 | 0.825082 | 5.688871e-54 | 5.133357e-51 |
| MsG0280009169.01 | MsG0580028419.01 | 0.808915 | 2.449014e-50 | 1.417876e-47 |
| MsG0280009169.01 | MsG0580028598.01 | 0.807237 | 5.574842e-50 | 3.088972e-47 |
| MsG0280009169.01 | MsG0580028719.01 | 0.807007 | 6.237387e-50 | 3.435399e-47 |
| MsG0280009169.01 | MsG0580028848.01 | 0.809939 | 1.476334e-50 | 8.783745e-48 |
| MsG0280009169.01 | MsG0580029394.01 | 0.806722 | 7.166545e-50 | 3.918193e-47 |
| MsG0280009169.01 | MsG0580029529.01 | 0.813078 | 3.070459e-51 | 1.985508e-48 |
| MsG0280009169.01 | MsG0680030514.01 | 0.821452 | 4.007569e-53 | 3.261607e-50 |
| MsG0280009169.01 | MsG0680030516.01 | 0.805541 | 1.269869e-49 | 6.735924e-47 |
| MsG0280009169.01 | MsG0680030599.01 | 0.809153 | 2.178285e-50 | 1.269262e-47 |
| MsG0280009169.01 | MsG0680030680.01 | 0.839440 | 1.582652e-57 | 2.185802e-54 |
| MsG0280009169.01 | MsG0680030767.01 | 0.813315 | 2.723347e-51 | 1.772530e-48 |
| MsG0280009169.01 | MsG0680030858.01 | 0.820708 | 5.945618e-53 | 4.739708e-50 |
| MsG0280009169.01 | MsG0680031146.01 | 0.846619 | 1.938396e-59 | 3.355969e-56 |
| MsG0280009169.01 | MsG0680031349.01 | 0.818916 | 1.526880e-52 | 1.158230e-49 |
| MsG0280009169.01 | MsG0680031996.01 | 0.800038 | 1.737976e-48 | 8.010705e-46 |
| MsG0280009169.01 | MsG0680032254.01 | 0.808705 | 2.716665e-50 | 1.564106e-47 |
| MsG0280009169.01 | MsG0680034480.01 | 0.835579 | 1.545496e-56 | 1.897857e-53 |
| MsG0280009169.01 | MsG0680034601.01 | 0.841578 | 4.365654e-58 | 6.442736e-55 |
| MsG0280009169.01 | MsG0680035075.01 | 0.812863 | 3.423204e-51 | 2.200842e-48 |
| MsG0280009169.01 | MsG0680035269.01 | 0.801601 | 8.338518e-49 | 3.998331e-46 |
| MsG0280009169.01 | MsG0780036509.01 | 0.863094 | 3.181501e-64 | 9.530842e-61 |
| MsG0280009169.01 | MsG0780036517.01 | 0.855356 | 6.664559e-62 | 1.534724e-58 |
| MsG0280009169.01 | MsG0780036595.01 | 0.801536 | 8.597055e-49 | 4.115812e-46 |
| MsG0280009169.01 | MsG0780036596.01 | 0.803086 | 4.123383e-49 | 2.053324e-46 |
| MsG0280009169.01 | MsG0780037351.01 | 0.834154 | 3.531600e-56 | 4.155042e-53 |
| MsG0280009169.01 | MsG0780037363.01 | 0.811941 | 5.442797e-51 | 3.414234e-48 |
| MsG0280009169.01 | MsG0780037679.01 | 0.801317 | 9.534713e-49 | 4.539547e-46 |
| MsG0280009169.01 | MsG0780037808.01 | 0.837475 | 5.086553e-57 | 6.615102e-54 |
| MsG0280009169.01 | MsG0780037910.01 | 0.801016 | 1.098699e-48 | 5.191725e-46 |
| MsG0280009169.01 | MsG0780038334.01 | 0.824438 | 8.070147e-54 | 7.148070e-51 |
| MsG0280009169.01 | MsG0780038784.01 | 0.804148 | 2.482684e-49 | 1.270587e-46 |
| MsG0280009169.01 | MsG0780039179.01 | 0.830900 | 2.263767e-55 | 2.417762e-52 |
| MsG0280009169.01 | MsG0780039186.01 | 0.812937 | 3.296543e-51 | 2.123673e-48 |
| MsG0280009169.01 | MsG0780039339.01 | 0.815978 | 7.006469e-52 | 4.902580e-49 |
| MsG0280009169.01 | MsG0780039795.01 | 0.808744 | 2.664511e-50 | 1.535669e-47 |
| MsG0280009169.01 | MsG0780039975.01 | 0.805449 | 1.327918e-49 | 7.027368e-47 |
| MsG0280009169.01 | MsG0780040235.01 | 0.805327 | 1.408416e-49 | 7.430023e-47 |
| MsG0280009169.01 | MsG0780040278.01 | 0.829795 | 4.214575e-55 | 4.359451e-52 |
| MsG0280009169.01 | MsG0780040700.01 | 0.819486 | 1.132714e-52 | 8.728445e-50 |
| MsG0280009169.01 | MsG0780041074.01 | 0.829149 | 6.048993e-55 | 6.138562e-52 |
| MsG0280009169.01 | MsG0780041088.01 | 0.803015 | 4.264226e-49 | 2.119633e-46 |
| MsG0280009169.01 | MsG0780041091.01 | 0.810142 | 1.335174e-50 | 7.985851e-48 |
| MsG0280009169.01 | MsG0780041138.01 | 0.806300 | 8.796706e-50 | 4.757775e-47 |
| MsG0280009169.01 | MsG0780041262.01 | 0.823762 | 1.163362e-53 | 1.011026e-50 |
| MsG0280009169.01 | MsG0780041272.01 | 0.831029 | 2.103797e-55 | 2.255361e-52 |
| MsG0280009169.01 | MsG0780041468.01 | 0.819203 | 1.313578e-52 | 1.004241e-49 |
| MsG0280009169.01 | MsG0880041864.01 | 0.807173 | 5.751059e-50 | 3.181331e-47 |
| MsG0280009169.01 | MsG0880041991.01 | 0.841876 | 3.641470e-58 | 5.424388e-55 |
| MsG0280009169.01 | MsG0880043249.01 | 0.801514 | 8.684752e-49 | 4.155514e-46 |
| MsG0280009169.01 | MsG0880043277.01 | 0.801145 | 1.033666e-48 | 4.900215e-46 |
| MsG0280009169.01 | MsG0880043278.01 | 0.814475 | 1.511711e-51 | 1.015413e-48 |
| MsG0280009169.01 | MsG0880043913.01 | 0.813163 | 2.941639e-51 | 1.906528e-48 |
| MsG0280009169.01 | MsG0880044043.01 | 0.857589 | 1.472141e-62 | 3.652322e-59 |
| MsG0280009169.01 | MsG0880044487.01 | 0.840036 | 1.107030e-57 | 1.557621e-54 |
| MsG0280009169.01 | MsG0880044538.01 | 0.811209 | 7.851124e-51 | 4.830620e-48 |
| MsG0280009169.01 | MsG0880044985.01 | 0.808237 | 3.418426e-50 | 1.944339e-47 |
| MsG0280009169.01 | MsG0880045402.01 | 0.809439 | 1.891038e-50 | 1.110333e-47 |
| MsG0280009169.01 | MsG0880045624.01 | 0.808490 | 3.018487e-50 | 1.728273e-47 |
| MsG0280009169.01 | MsG0880045668.01 | 0.834876 | 2.325376e-56 | 2.795943e-53 |
| MsG0280009169.01 | MsG0880045722.01 | 0.835442 | 1.674383e-56 | 2.047736e-53 |
| MsG0280009169.01 | MsG0880045899.01 | 0.801699 | 7.959758e-49 | 3.826301e-46 |
| MsG0280009169.01 | MsG0880046025.01 | 0.828734 | 7.623118e-55 | 7.641975e-52 |
| MsG0280009169.01 | MsG0880046200.01 | 0.835414 | 1.701212e-56 | 2.078930e-53 |
| MsG0280009169.01 | MsG0880047234.01 | 0.807217 | 5.630017e-50 | 3.117874e-47 |
| MsG0280009169.01 | MsG0880047394.01 | 0.849838 | 2.500586e-60 | 4.802546e-57 |
| MsG0280009169.01 | MsG0880047481.01 | -0.809313 | 2.012669e-50 | 1.177759e-47 |
| MsG0280009169.01 | MsG0880047770.01 | 0.857845 | 1.236897e-62 | 3.094782e-59 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009169.01.T01 | MTR_0011s0280 | 84.436 | 257 | 6 | 1 | 1 | 223 | 1 | 257 | 1.31e-152 | 428 |
| MsG0280009169.01.T01 | MTR_8g009820 | 41.245 | 257 | 111 | 3 | 2 | 223 | 62 | 313 | 1.32e-59 | 193 |
| MsG0280009169.01.T01 | MTR_7g406860 | 37.407 | 270 | 125 | 5 | 2 | 232 | 5 | 269 | 1.21e-58 | 189 |
| MsG0280009169.01.T01 | MTR_8g010000 | 41.379 | 232 | 122 | 3 | 2 | 223 | 3 | 230 | 5.83e-58 | 186 |
| MsG0280009169.01.T01 | MTR_8g009980 | 38.132 | 257 | 120 | 3 | 2 | 223 | 3 | 255 | 6.45e-56 | 182 |
| MsG0280009169.01.T01 | MTR_8g009830 | 41.085 | 258 | 109 | 5 | 2 | 223 | 3 | 253 | 7.35e-56 | 181 |
| MsG0280009169.01.T01 | MTR_8g010030 | 38.132 | 257 | 120 | 4 | 2 | 223 | 3 | 255 | 7.90e-55 | 179 |
| MsG0280009169.01.T01 | MTR_8g009840 | 40.310 | 258 | 111 | 5 | 2 | 223 | 3 | 253 | 5.86e-53 | 179 |
| MsG0280009169.01.T01 | MTR_4g082970 | 34.766 | 256 | 130 | 2 | 2 | 223 | 9 | 261 | 8.39e-50 | 166 |
| MsG0280009169.01.T01 | MTR_8g007325 | 38.462 | 221 | 96 | 3 | 2 | 187 | 3 | 218 | 3.69e-44 | 148 |
| MsG0280009169.01.T01 | MTR_8g010020 | 32.031 | 256 | 105 | 3 | 2 | 223 | 3 | 223 | 1.94e-41 | 143 |
| MsG0280009169.01.T01 | MTR_2g088220 | 29.572 | 257 | 140 | 5 | 4 | 223 | 8 | 260 | 4.65e-33 | 122 |
| MsG0280009169.01.T01 | MTR_2g088200 | 28.462 | 260 | 146 | 5 | 1 | 223 | 4 | 260 | 4.81e-29 | 112 |
| MsG0280009169.01.T01 | MTR_2g088190 | 28.185 | 259 | 144 | 7 | 3 | 223 | 5 | 259 | 5.78e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009169.01.T01 | AT5G16970 | 39.147 | 258 | 120 | 3 | 1 | 223 | 1 | 256 | 3.18e-61 | 196 |
| MsG0280009169.01.T01 | AT5G17000 | 40.310 | 258 | 117 | 3 | 1 | 223 | 1 | 256 | 5.34e-61 | 195 |
| MsG0280009169.01.T01 | AT1G65560 | 39.231 | 260 | 113 | 5 | 3 | 223 | 7 | 260 | 1.76e-60 | 194 |
| MsG0280009169.01.T01 | AT5G16990 | 39.608 | 255 | 116 | 3 | 4 | 223 | 3 | 254 | 5.14e-60 | 192 |
| MsG0280009169.01.T01 | AT1G26320 | 39.535 | 258 | 119 | 3 | 1 | 223 | 7 | 262 | 1.78e-57 | 186 |
| MsG0280009169.01.T01 | AT3G59845 | 38.521 | 257 | 120 | 3 | 3 | 223 | 5 | 259 | 3.24e-57 | 185 |
| MsG0280009169.01.T01 | AT3G03080 | 38.431 | 255 | 121 | 2 | 3 | 223 | 9 | 261 | 9.58e-57 | 184 |
| MsG0280009169.01.T01 | AT1G26320 | 39.442 | 251 | 120 | 3 | 3 | 223 | 9 | 257 | 7.11e-56 | 182 |
| MsG0280009169.01.T01 | AT5G16960 | 38.189 | 254 | 120 | 3 | 5 | 223 | 6 | 257 | 3.06e-54 | 177 |
| MsG0280009169.01.T01 | AT5G16960 | 38.189 | 254 | 120 | 3 | 5 | 223 | 6 | 257 | 3.06e-54 | 177 |
| MsG0280009169.01.T01 | AT5G37940 | 37.647 | 255 | 123 | 3 | 4 | 223 | 11 | 264 | 3.94e-54 | 177 |
| MsG0280009169.01.T01 | AT5G38000 | 38.039 | 255 | 122 | 3 | 4 | 223 | 11 | 264 | 8.38e-54 | 176 |
| MsG0280009169.01.T01 | AT5G38000 | 38.039 | 255 | 122 | 3 | 4 | 223 | 11 | 264 | 9.39e-54 | 176 |
| MsG0280009169.01.T01 | AT5G37980 | 36.471 | 255 | 126 | 3 | 4 | 223 | 11 | 264 | 9.66e-51 | 169 |
| MsG0280009169.01.T01 | AT5G17000 | 37.668 | 223 | 102 | 3 | 1 | 188 | 1 | 221 | 2.96e-46 | 154 |
| MsG0280009169.01.T01 | AT5G38000 | 36.441 | 236 | 133 | 3 | 4 | 223 | 11 | 245 | 9.97e-46 | 155 |
| MsG0280009169.01.T01 | AT1G65560 | 40.761 | 184 | 70 | 3 | 78 | 223 | 2 | 184 | 1.15e-42 | 145 |
| MsG0280009169.01.T01 | AT3G59845 | 42.038 | 157 | 57 | 1 | 101 | 223 | 1 | 157 | 1.65e-36 | 129 |
| MsG0280009169.01.T01 | AT5G16980 | 43.382 | 136 | 43 | 1 | 122 | 223 | 15 | 150 | 5.48e-31 | 114 |
| MsG0280009169.01.T01 | AT5G16980 | 43.382 | 136 | 43 | 1 | 122 | 223 | 15 | 150 | 5.48e-31 | 114 |
| MsG0280009169.01.T01 | AT5G16980 | 43.382 | 136 | 43 | 1 | 122 | 223 | 81 | 216 | 1.10e-30 | 115 |
Find 47 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATTGATGCTCTAGTTAT+TGG | 0.197686 | 2:-46804530 | MsG0280009169.01.T01:CDS |
| CACTTCCATTTCACTTTGAT+TGG | 0.213484 | 2:+46805580 | None:intergenic |
| CTTCAAAATGTGACTCCTTT+GGG | 0.232194 | 2:+46805516 | None:intergenic |
| ATTGGAAGAGTTGTGACTTC+TGG | 0.238593 | 2:-46804512 | MsG0280009169.01.T01:CDS |
| ACTTATCATCTTGGAATTCT+TGG | 0.247958 | 2:-46804374 | MsG0280009169.01.T01:intron |
| ATCTAAACTCCACTCTTAAA+AGG | 0.259045 | 2:-46803858 | MsG0280009169.01.T01:intron |
| AGTACCTGGCCTGGAGTTAA+TGG | 0.270568 | 2:+46805350 | None:intergenic |
| TGAGAAAGATGATTTGGTTA+TGG | 0.293811 | 2:-46804477 | MsG0280009169.01.T01:CDS |
| GAGAAAGATGATTTGGTTAT+GGG | 0.296791 | 2:-46804476 | MsG0280009169.01.T01:CDS |
| TGAAATTTGCAAACCACAAA+AGG | 0.339905 | 2:-46804138 | MsG0280009169.01.T01:CDS |
| ACTTCAAAATGTGACTCCTT+TGG | 0.341261 | 2:+46805515 | None:intergenic |
| TAAGTTTGAGAAAGATGATT+TGG | 0.344609 | 2:-46804483 | MsG0280009169.01.T01:CDS |
| TTTAGTGGACTATCAGCTTA+TGG | 0.344753 | 2:-46804170 | MsG0280009169.01.T01:CDS |
| CTTTATCACTATGTATTTGT+TGG | 0.353004 | 2:+46805556 | None:intergenic |
| TTTCCACTCACTTATCATCT+TGG | 0.363774 | 2:-46804383 | MsG0280009169.01.T01:CDS |
| TTGGAAGAGTTGTGACTTCT+GGG | 0.364560 | 2:-46804511 | MsG0280009169.01.T01:CDS |
| GAAGTCAAAACTGAGGCTTT+TGG | 0.392213 | 2:-46805497 | MsG0280009169.01.T01:CDS |
| GGTTTCTTCCTTGTAGTTGA+AGG | 0.426312 | 2:+46803882 | None:intergenic |
| AGCAACCAATCAAAGTGAAA+TGG | 0.440276 | 2:-46805585 | None:intergenic |
| GGCTGAGTACAGTGTAGTTA+AGG | 0.443379 | 2:-46804441 | MsG0280009169.01.T01:CDS |
| TTCATGCGGTTAATAAGATA+AGG | 0.447040 | 2:+46805413 | None:intergenic |
| TTTGGTCTTTCGTTGAAGCC+AGG | 0.456307 | 2:-46805479 | MsG0280009169.01.T01:CDS |
| CAGGTGATTGAGACAGGTCG+TGG | 0.465728 | 2:-46803233 | MsG0280009169.01.T01:CDS |
| TAATGGAGTTGCAAAGCTAA+TGG | 0.491094 | 2:+46805367 | None:intergenic |
| CAAACCACAAAAGGGTGAAA+AGG | 0.495171 | 2:-46804129 | MsG0280009169.01.T01:intron |
| AAAATATATGTCAATTCCAT+CGG | 0.496992 | 2:+46803490 | None:intergenic |
| TGGTTATGGGAGTATTCACT+TGG | 0.497920 | 2:-46804463 | MsG0280009169.01.T01:CDS |
| GAAATTTGCAAACCACAAAA+GGG | 0.506126 | 2:-46804137 | MsG0280009169.01.T01:CDS |
| AAATATATGTCAATTCCATC+GGG | 0.511624 | 2:+46803491 | None:intergenic |
| TTTGCAACTCCATTAACTCC+AGG | 0.512264 | 2:-46805359 | MsG0280009169.01.T01:CDS |
| CAAATGATGAGTACCTGGCC+TGG | 0.527096 | 2:+46805341 | None:intergenic |
| TGATGATGCCTTCAACTACA+AGG | 0.530215 | 2:-46803890 | MsG0280009169.01.T01:CDS |
| TTTAAGAGTGGAGTTTAGAT+CGG | 0.530559 | 2:+46803861 | None:intergenic |
| CAGGTGCAGGTGATTGAGAC+AGG | 0.531180 | 2:-46803239 | MsG0280009169.01.T01:CDS |
| TTCAAAATGTGACTCCTTTG+GGG | 0.537629 | 2:+46805517 | None:intergenic |
| ATTGTCACTTCATCAGAACC+TGG | 0.549117 | 2:+46805461 | None:intergenic |
| AACTCCATTAACTCCAGGCC+AGG | 0.553286 | 2:-46805354 | MsG0280009169.01.T01:intron |
| TATTTCAGGTACTTTCCCGA+TGG | 0.559890 | 2:-46803506 | MsG0280009169.01.T01:intron |
| ATAAGTGAGTGGAAATTCAA+AGG | 0.566962 | 2:+46804391 | None:intergenic |
| ACATTACTCAAAGAAGAGCT+AGG | 0.588928 | 2:-46803916 | MsG0280009169.01.T01:CDS |
| TTTGTAGAGTGGTCTGTTTG+CGG | 0.593508 | 2:-46803416 | MsG0280009169.01.T01:CDS |
| ACATGAAAGCATTTGTAGAG+TGG | 0.608313 | 2:-46803427 | MsG0280009169.01.T01:CDS |
| GGTTATGGGAGTATTCACTT+GGG | 0.610812 | 2:-46804462 | MsG0280009169.01.T01:CDS |
| AGTGGACTATCAGCTTATGG+AGG | 0.634508 | 2:-46804167 | MsG0280009169.01.T01:CDS |
| ATTCCAAGATGATAAGTGAG+TGG | 0.641007 | 2:+46804380 | None:intergenic |
| AGGTGATTGAGACAGGTCGT+GGG | 0.676956 | 2:-46803232 | MsG0280009169.01.T01:CDS |
| TCACATTGAAGATTCCCCAA+AGG | 0.691073 | 2:-46805531 | MsG0280009169.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATAAAAATACAAAAAA+AGG | + | Chr2:46804030-46804049 | None:intergenic | 10.0% |
| !! | ATTTACAAAAATCATTAATT+AGG | + | Chr2:46804119-46804138 | None:intergenic | 10.0% |
| !!! | ACAATTTTATATATATTCTA+TGG | - | Chr2:46804147-46804166 | MsG0280009169.01.T01:CDS | 10.0% |
| !! | AATAAAAATACAAAAAAAGG+CGG | + | Chr2:46804027-46804046 | None:intergenic | 15.0% |
| !! | ATTCAAAATAATTACATCAA+AGG | + | Chr2:46805279-46805298 | None:intergenic | 15.0% |
| !! | CTAAGATAAAAATAAATTCA+TGG | + | Chr2:46804865-46804884 | None:intergenic | 15.0% |
| !!! | ATATATATTCTATGGATTTT+TGG | - | Chr2:46804155-46804174 | MsG0280009169.01.T01:CDS | 15.0% |
| !!! | CATGAATTTATTTTTATCTT+AGG | - | Chr2:46804863-46804882 | MsG0280009169.01.T01:intron | 15.0% |
| !!! | GTAATTATTTTGAATATTTC+AGG | - | Chr2:46805284-46805303 | MsG0280009169.01.T01:intron | 15.0% |
| !! | AAAACAAATAAAAATGACAC+AGG | + | Chr2:46803737-46803756 | None:intergenic | 20.0% |
| !! | AAAATATATGTCAATTCCAT+CGG | + | Chr2:46805317-46805336 | None:intergenic | 20.0% |
| !! | ACAAAAATCATTAATTAGGA+TGG | + | Chr2:46804115-46804134 | None:intergenic | 20.0% |
| !! | CCTATTTATAGAAGAATATT+GGG | - | Chr2:46805000-46805019 | MsG0280009169.01.T01:intron | 20.0% |
| !! | TCCTATTTATAGAAGAATAT+TGG | - | Chr2:46804999-46805018 | MsG0280009169.01.T01:intron | 20.0% |
| !!! | GCTTTAAATTATTTATCATC+CGG | - | Chr2:46803767-46803786 | MsG0280009169.01.T01:intron | 20.0% |
| !!! | TTTTATATAATCCTTTTTGC+AGG | - | Chr2:46804610-46804629 | MsG0280009169.01.T01:intron | 20.0% |
| ! | AAATATATGTCAATTCCATC+GGG | + | Chr2:46805316-46805335 | None:intergenic | 25.0% |
| ! | AACTAAATAACCACTCAAAT+TGG | + | Chr2:46803898-46803917 | None:intergenic | 25.0% |
| ! | AATTTCTGAGTATACTATGT+TGG | - | Chr2:46805414-46805433 | MsG0280009169.01.T01:CDS | 25.0% |
| ! | ACAATTAAACCAATTAAACC+AGG | + | Chr2:46803692-46803711 | None:intergenic | 25.0% |
| ! | CCCAATATTCTTCTATAAAT+AGG | + | Chr2:46805003-46805022 | None:intergenic | 25.0% |
| ! | CCTAATTATAAGAGAAAGTT+GGG | + | Chr2:46805085-46805104 | None:intergenic | 25.0% |
| ! | CTTTATCACTATGTATTTGT+TGG | + | Chr2:46803251-46803270 | None:intergenic | 25.0% |
| ! | GTAAGTAATGCTATAGAAAT+CGG | - | Chr2:46803555-46803574 | MsG0280009169.01.T01:intron | 25.0% |
| ! | GTACTCAAAATTCTTGATAT+AGG | - | Chr2:46803490-46803509 | MsG0280009169.01.T01:CDS | 25.0% |
| ! | TAAGTTTGAGAAAGATGATT+TGG | - | Chr2:46804321-46804340 | MsG0280009169.01.T01:intron | 25.0% |
| ! | TCAACAAAAGTTTATGTATC+TGG | + | Chr2:46805062-46805081 | None:intergenic | 25.0% |
| ! | TCCTAATTATAAGAGAAAGT+TGG | + | Chr2:46805086-46805105 | None:intergenic | 25.0% |
| !! | AGATTTTTCTGCTAAAACAT+TGG | - | Chr2:46805526-46805545 | MsG0280009169.01.T01:CDS | 25.0% |
| !! | GCTGATTATATGAATGTTTT+TGG | - | Chr2:46805503-46805522 | MsG0280009169.01.T01:CDS | 25.0% |
| !! | TGGTTTAATTGGTTTAATTG+TGG | - | Chr2:46803691-46803710 | MsG0280009169.01.T01:intron | 25.0% |
| !!! | ACATATATTTTGACAATGTC+GGG | - | Chr2:46805326-46805345 | MsG0280009169.01.T01:intron | 25.0% |
| !!! | GACATATATTTTGACAATGT+CGG | - | Chr2:46805325-46805344 | MsG0280009169.01.T01:intron | 25.0% |
| !!! | TGTTTTGAAAACCATACTAA+TGG | + | Chr2:46804208-46804227 | None:intergenic | 25.0% |
| AAAAATACAAAAAAAGGCGG+CGG | + | Chr2:46804024-46804043 | None:intergenic | 30.0% | |
| AAATATTGCACCCTAGATAA+GGG | + | Chr2:46804077-46804096 | None:intergenic | 30.0% | |
| ACTTATCATCTTGGAATTCT+TGG | - | Chr2:46804430-46804449 | MsG0280009169.01.T01:CDS | 30.0% | |
| ATAAGTGAGTGGAAATTCAA+AGG | + | Chr2:46804416-46804435 | None:intergenic | 30.0% | |
| ATCTAAACTCCACTCTTAAA+AGG | - | Chr2:46804946-46804965 | MsG0280009169.01.T01:intron | 30.0% | |
| CCCAACTTTCTCTTATAATT+AGG | - | Chr2:46805082-46805101 | MsG0280009169.01.T01:intron | 30.0% | |
| CTAGTTGAGTCATATTGAAT+GGG | - | Chr2:46803659-46803678 | MsG0280009169.01.T01:intron | 30.0% | |
| GAAATTTGCAAACCACAAAA+GGG | - | Chr2:46804667-46804686 | MsG0280009169.01.T01:intron | 30.0% | |
| GAAGAAAAATGTCTAGTGAA+TGG | - | Chr2:46804517-46804536 | MsG0280009169.01.T01:CDS | 30.0% | |
| TAAATATTGCACCCTAGATA+AGG | + | Chr2:46804078-46804097 | None:intergenic | 30.0% | |
| TATACAACATCCCTCATATT+TGG | + | Chr2:46805452-46805471 | None:intergenic | 30.0% | |
| TCTAGTTGAGTCATATTGAA+TGG | - | Chr2:46803658-46803677 | MsG0280009169.01.T01:intron | 30.0% | |
| TGAAATTTGCAAACCACAAA+AGG | - | Chr2:46804666-46804685 | MsG0280009169.01.T01:intron | 30.0% | |
| TTCATGCGGTTAATAAGATA+AGG | + | Chr2:46803394-46803413 | None:intergenic | 30.0% | |
| TTTAAGAGTGGAGTTTAGAT+CGG | + | Chr2:46804946-46804965 | None:intergenic | 30.0% | |
| ! | GGACAATATGCAAAACTTTT+AGG | - | Chr2:46804737-46804756 | MsG0280009169.01.T01:intron | 30.0% |
| !! | CAAAAAAGGTGAGCTTTATT+AGG | - | Chr2:46804790-46804809 | MsG0280009169.01.T01:intron | 30.0% |
| !! | GAGAAAGATGATTTGGTTAT+GGG | - | Chr2:46804328-46804347 | MsG0280009169.01.T01:intron | 30.0% |
| !! | TGAGAAAGATGATTTGGTTA+TGG | - | Chr2:46804327-46804346 | MsG0280009169.01.T01:intron | 30.0% |
| !! | TTCTTCTTGTTGTCCTATTT+TGG | - | Chr2:46804240-46804259 | MsG0280009169.01.T01:intron | 30.0% |
| !! | TTGAGTGGTTATTTAGTTTG+TGG | - | Chr2:46803900-46803919 | MsG0280009169.01.T01:CDS | 30.0% |
| !!! | ACATTTTGAAGTCAAAACTG+AGG | - | Chr2:46803300-46803319 | MsG0280009169.01.T01:intron | 30.0% |
| !!! | ATATATTTTGACAATGTCGG+GGG | - | Chr2:46805328-46805347 | MsG0280009169.01.T01:intron | 30.0% |
| !!! | CATATATTTTGACAATGTCG+GGG | - | Chr2:46805327-46805346 | MsG0280009169.01.T01:intron | 30.0% |
| !!! | CTAATAAAGCTCACCTTTTT+TGG | + | Chr2:46804792-46804811 | None:intergenic | 30.0% |
| AACATTGGATTATCTCGCAA+TGG | - | Chr2:46805541-46805560 | MsG0280009169.01.T01:CDS | 35.0% | |
| AACCAGAAAAGAGAGTAGTT+CGG | + | Chr2:46804476-46804495 | None:intergenic | 35.0% | |
| AAGACTTGAACCCTTATCTA+GGG | - | Chr2:46804064-46804083 | MsG0280009169.01.T01:intron | 35.0% | |
| ACATTACTCAAAGAAGAGCT+AGG | - | Chr2:46804888-46804907 | MsG0280009169.01.T01:intron | 35.0% | |
| ACTTCAAAATGTGACTCCTT+TGG | + | Chr2:46803292-46803311 | None:intergenic | 35.0% | |
| AGCCAAAATCATTGTACTCA+AGG | + | Chr2:46804823-46804842 | None:intergenic | 35.0% | |
| ATACAGAGAATCACTATCAG+AGG | - | Chr2:46805469-46805488 | MsG0280009169.01.T01:CDS | 35.0% | |
| ATTCCAAGATGATAAGTGAG+TGG | + | Chr2:46804427-46804446 | None:intergenic | 35.0% | |
| CTATAGAAATCGGATCGAAT+TGG | - | Chr2:46803565-46803584 | MsG0280009169.01.T01:intron | 35.0% | |
| CTCTTATAATTAGGACCAGA+TGG | - | Chr2:46805091-46805110 | MsG0280009169.01.T01:intron | 35.0% | |
| CTTCAAAATGTGACTCCTTT+GGG | + | Chr2:46803291-46803310 | None:intergenic | 35.0% | |
| CTTCTATAAATAGGACCAGA+GGG | + | Chr2:46804994-46805013 | None:intergenic | 35.0% | |
| GCCAAAATCATTGTACTCAA+GGG | + | Chr2:46804822-46804841 | None:intergenic | 35.0% | |
| GCTATTGATGCTCTAGTTAT+TGG | - | Chr2:46804274-46804293 | MsG0280009169.01.T01:intron | 35.0% | |
| GTGTCGAATATCTATGTATG+TGG | + | Chr2:46805128-46805147 | None:intergenic | 35.0% | |
| TAAGACTTGAACCCTTATCT+AGG | - | Chr2:46804063-46804082 | MsG0280009169.01.T01:intron | 35.0% | |
| TAATGGAGTTGCAAAGCTAA+TGG | + | Chr2:46803440-46803459 | None:intergenic | 35.0% | |
| TCTTCTATAAATAGGACCAG+AGG | + | Chr2:46804995-46805014 | None:intergenic | 35.0% | |
| TTATCATCCGGTTCAATATC+CGG | - | Chr2:46803779-46803798 | MsG0280009169.01.T01:intron | 35.0% | |
| TTCAAAATGTGACTCCTTTG+GGG | + | Chr2:46803290-46803309 | None:intergenic | 35.0% | |
| TTTCCACTCACTTATCATCT+TGG | - | Chr2:46804421-46804440 | MsG0280009169.01.T01:CDS | 35.0% | |
| ! | AATACCTTTTCACCCTTTTG+TGG | + | Chr2:46804682-46804701 | None:intergenic | 35.0% |
| ! | ATCCTTTTTGCAGGATTTAG+TGG | - | Chr2:46804619-46804638 | MsG0280009169.01.T01:intron | 35.0% |
| ! | CGATCTTGAGTGATTTTGTT+GGG | + | Chr2:46804185-46804204 | None:intergenic | 35.0% |
| ! | GATCTTGAGTGATTTTGTTG+GGG | + | Chr2:46804184-46804203 | None:intergenic | 35.0% |
| ! | GTCTCAGGTTTCATTCTTTT+CGG | - | Chr2:46803870-46803889 | MsG0280009169.01.T01:CDS | 35.0% |
| !! | ACATGAAAGCATTTGTAGAG+TGG | - | Chr2:46805377-46805396 | MsG0280009169.01.T01:CDS | 35.0% |
| !! | AGTGGTTATTTAGTTTGTGG+TGG | - | Chr2:46803903-46803922 | MsG0280009169.01.T01:CDS | 35.0% |
| !! | GCTAACAAACCTTTTAAGAG+TGG | + | Chr2:46804958-46804977 | None:intergenic | 35.0% |
| !! | TCTGGACTGATTTTTGAACT+AGG | + | Chr2:46805044-46805063 | None:intergenic | 35.0% |
| !! | TTTAGGTGTTGCTATGTTGT+TGG | - | Chr2:46804754-46804773 | MsG0280009169.01.T01:intron | 35.0% |
| !! | TTTAGTGGACTATCAGCTTA+TGG | - | Chr2:46804634-46804653 | MsG0280009169.01.T01:intron | 35.0% |
| AAACCAACTCGTGAATTGGT+CGG | + | Chr2:46803619-46803638 | None:intergenic | 40.0% | |
| ACTCAAGATCGCCATTAGTA+TGG | - | Chr2:46804194-46804213 | MsG0280009169.01.T01:intron | 40.0% | |
| AGAGAGCTTCACCAAATATG+AGG | - | Chr2:46805438-46805457 | MsG0280009169.01.T01:CDS | 40.0% | |
| AGGTTCCAAGTTAACACTAC+TGG | + | Chr2:46803829-46803848 | None:intergenic | 40.0% | |
| ATTGGAAGAGTTGTGACTTC+TGG | - | Chr2:46804292-46804311 | MsG0280009169.01.T01:intron | 40.0% | |
| CAAACCACAAAAGGGTGAAA+AGG | - | Chr2:46804675-46804694 | MsG0280009169.01.T01:intron | 40.0% | |
| CCAAACAAATGATGAGTACC+TGG | + | Chr2:46803471-46803490 | None:intergenic | 40.0% | |
| CCAGGTACTCATCATTTGTT+TGG | - | Chr2:46803468-46803487 | MsG0280009169.01.T01:CDS | 40.0% | |
| CTGGATCAGTTGGATATTGT+AGG | - | Chr2:46804716-46804735 | MsG0280009169.01.T01:intron | 40.0% | |
| GAGAGCTTCACCAAATATGA+GGG | - | Chr2:46805439-46805458 | MsG0280009169.01.T01:CDS | 40.0% | |
| GATCAAACCAACTCGTGAAT+TGG | + | Chr2:46803623-46803642 | None:intergenic | 40.0% | |
| GGTTCCAAGTTAACACTACT+GGG | + | Chr2:46803828-46803847 | None:intergenic | 40.0% | |
| GGTTTCTTCCTTGTAGTTGA+AGG | + | Chr2:46804925-46804944 | None:intergenic | 40.0% | |
| GTATTTGTTTCAGCAGCATC+TGG | - | Chr2:46804697-46804716 | MsG0280009169.01.T01:intron | 40.0% | |
| GTCCACTAAATCCTGCAAAA+AGG | + | Chr2:46804624-46804643 | None:intergenic | 40.0% | |
| TATAAACTATGTGCGTGCGA+TGG | + | Chr2:46803957-46803976 | None:intergenic | 40.0% | |
| TCACATTGAAGATTCCCCAA+AGG | - | Chr2:46803273-46803292 | MsG0280009169.01.T01:intron | 40.0% | |
| TTGGAAGAGTTGTGACTTCT+GGG | - | Chr2:46804293-46804312 | MsG0280009169.01.T01:intron | 40.0% | |
| TTGGAGTATGCTTCTCTTCA+AGG | - | Chr2:46803848-46803867 | MsG0280009169.01.T01:intron | 40.0% | |
| TTTGCAACTCCATTAACTCC+AGG | - | Chr2:46803445-46803464 | MsG0280009169.01.T01:CDS | 40.0% | |
| TTTGTAGAGTGGTCTGTTTG+CGG | - | Chr2:46805388-46805407 | MsG0280009169.01.T01:CDS | 40.0% | |
| ! | ATTGTCACTTCATCAGAACC+TGG | + | Chr2:46803346-46803365 | None:intergenic | 40.0% |
| ! | CAGGTTGAATTAACAGCTGT+TGG | + | Chr2:46803718-46803737 | None:intergenic | 40.0% |
| ! | GAAGTCAAAACTGAGGCTTT+TGG | - | Chr2:46803307-46803326 | MsG0280009169.01.T01:intron | 40.0% |
| ! | GCCCTTGAGTACAATGATTT+TGG | - | Chr2:46804818-46804837 | MsG0280009169.01.T01:intron | 40.0% |
| ! | GCGATCTTGAGTGATTTTGT+TGG | + | Chr2:46804186-46804205 | None:intergenic | 40.0% |
| ! | GGAGTTGATCCTGGTTTAAT+TGG | - | Chr2:46803680-46803699 | MsG0280009169.01.T01:intron | 40.0% |
| ! | GTAGTGTTAACTTGGAACCT+TGG | - | Chr2:46803829-46803848 | MsG0280009169.01.T01:intron | 40.0% |
| ! | TAACTAGAGCATCAATAGCC+TGG | + | Chr2:46804273-46804292 | None:intergenic | 40.0% |
| ! | TATTGAATGGGAGTTGATCC+TGG | - | Chr2:46803671-46803690 | MsG0280009169.01.T01:intron | 40.0% |
| ! | TATTTCAGGTACTTTCCCGA+TGG | - | Chr2:46805298-46805317 | MsG0280009169.01.T01:intron | 40.0% |
| ! | TGATGATGCCTTCAACTACA+AGG | - | Chr2:46804914-46804933 | MsG0280009169.01.T01:intron | 40.0% |
| ! | TTGAAGAGAAGCATACTCCA+AGG | + | Chr2:46803849-46803868 | None:intergenic | 40.0% |
| !! | GGTTATGGGAGTATTCACTT+GGG | - | Chr2:46804342-46804361 | MsG0280009169.01.T01:intron | 40.0% |
| !! | TGGTTATGGGAGTATTCACT+TGG | - | Chr2:46804341-46804360 | MsG0280009169.01.T01:intron | 40.0% |
| !!! | TCCTATTTTGGCACTTTTCC+AGG | - | Chr2:46804252-46804271 | MsG0280009169.01.T01:intron | 40.0% |
| ATGCTTCTCTTCAAGGTCTC+AGG | - | Chr2:46803855-46803874 | MsG0280009169.01.T01:intron | 45.0% | |
| GGCTGAGTACAGTGTAGTTA+AGG | - | Chr2:46804363-46804382 | MsG0280009169.01.T01:intron | 45.0% | |
| GTGGTTCTTAGTACTCCATC+TGG | + | Chr2:46805109-46805128 | None:intergenic | 45.0% | |
| TGGATTATCTCGCAATGGTC+AGG | - | Chr2:46805546-46805565 | MsG0280009169.01.T01:CDS | 45.0% | |
| TTGGCCCAGTAGTGTTAACT+TGG | - | Chr2:46803821-46803840 | MsG0280009169.01.T01:intron | 45.0% | |
| ! | CACCGAACTACTCTCTTTTC+TGG | - | Chr2:46804471-46804490 | MsG0280009169.01.T01:CDS | 45.0% |
| ! | TGGTGGATCTTGATTGAAGC+TGG | - | Chr2:46803920-46803939 | MsG0280009169.01.T01:CDS | 45.0% |
| ! | TTTGGTCTTTCGTTGAAGCC+AGG | - | Chr2:46803325-46803344 | MsG0280009169.01.T01:intron | 45.0% |
| !! | AAGCGCTGTAGCTTTTCATG+CGG | + | Chr2:46803408-46803427 | None:intergenic | 45.0% |
| !! | AGTGGACTATCAGCTTATGG+AGG | - | Chr2:46804637-46804656 | MsG0280009169.01.T01:intron | 45.0% |
| !! | GCCTGGAAAAGTGCCAAAAT+AGG | + | Chr2:46804256-46804275 | None:intergenic | 45.0% |
| !! | TTCACGAGTTGGTTTGATCG+TGG | - | Chr2:46803624-46803643 | MsG0280009169.01.T01:intron | 45.0% |
| !!! | CTTTTCGGTGCCAATTTGAG+TGG | - | Chr2:46803885-46803904 | MsG0280009169.01.T01:CDS | 45.0% |
| AACTCCATTAACTCCAGGCC+AGG | - | Chr2:46803450-46803469 | MsG0280009169.01.T01:CDS | 50.0% | |
| AGGTGATTGAGACAGGTCGT+GGG | - | Chr2:46805572-46805591 | MsG0280009169.01.T01:exon | 50.0% | |
| AGTACCTGGCCTGGAGTTAA+TGG | + | Chr2:46803457-46803476 | None:intergenic | 50.0% | |
| ATCCGGTTCAATATCCGGTG+TGG | - | Chr2:46803784-46803803 | MsG0280009169.01.T01:intron | 50.0% | |
| CAAATGATGAGTACCTGGCC+TGG | + | Chr2:46803466-46803485 | None:intergenic | 50.0% | |
| GAACCGACCAATTCACGAGT+TGG | - | Chr2:46803613-46803632 | MsG0280009169.01.T01:intron | 50.0% | |
| GCGATGTCAAATACTCCCTC+TGG | - | Chr2:46804976-46804995 | MsG0280009169.01.T01:intron | 50.0% | |
| TCAGCAGCATCTGGATCAGT+TGG | - | Chr2:46804706-46804725 | MsG0280009169.01.T01:intron | 50.0% | |
| ! | GCTATGTTGTTGGCTGTGCT+GGG | - | Chr2:46804764-46804783 | MsG0280009169.01.T01:intron | 50.0% |
| ! | TGCTATGTTGTTGGCTGTGC+TGG | - | Chr2:46804763-46804782 | MsG0280009169.01.T01:intron | 50.0% |
| ACTACTGGGCCAACCCTAGT+GGG | + | Chr2:46803814-46803833 | None:intergenic | 55.0% | |
| ACTATGTGCGTGCGATGGCA+TGG | + | Chr2:46803952-46803971 | None:intergenic | 55.0% | |
| ATCTCGCAATGGTCAGGTGC+AGG | - | Chr2:46805552-46805571 | MsG0280009169.01.T01:CDS | 55.0% | |
| CAGGTGATTGAGACAGGTCG+TGG | - | Chr2:46805571-46805590 | MsG0280009169.01.T01:exon | 55.0% | |
| CAGGTGCAGGTGATTGAGAC+AGG | - | Chr2:46805565-46805584 | MsG0280009169.01.T01:CDS | 55.0% | |
| CGCCACACCGGATATTGAAC+CGG | + | Chr2:46803789-46803808 | None:intergenic | 55.0% | |
| GCTGTGCTGGGAGCCAAAAA+AGG | - | Chr2:46804776-46804795 | MsG0280009169.01.T01:intron | 55.0% | |
| CACTACTGGGCCAACCCTAG+TGG | + | Chr2:46803815-46803834 | None:intergenic | 60.0% | |
| CTACTGGGCCAACCCTAGTG+GGG | + | Chr2:46803813-46803832 | None:intergenic | 60.0% | |
| TGTGGCGACCCCACTAGGGT+TGG | - | Chr2:46803802-46803821 | MsG0280009169.01.T01:intron | 65.0% | |
| CCCTAGTGGGGTCGCCACAC+CGG | + | Chr2:46803801-46803820 | None:intergenic | 70.0% | |
| CCGGTGTGGCGACCCCACTA+GGG | - | Chr2:46803798-46803817 | MsG0280009169.01.T01:intron | 70.0% | |
| TCCGGTGTGGCGACCCCACT+AGG | - | Chr2:46803797-46803816 | MsG0280009169.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 46803226 | 46805600 | 46803226 | ID=MsG0280009169.01;Name=MsG0280009169.01 |
| Chr2 | mRNA | 46803226 | 46805600 | 46803226 | ID=MsG0280009169.01.T01;Parent=MsG0280009169.01;Name=MsG0280009169.01.T01;_AED=0.38;_eAED=0.38;_QI=12|0.6|0.5|1|1|1|6|0|232 |
| Chr2 | exon | 46805355 | 46805600 | 46805355 | ID=MsG0280009169.01.T01:exon:36795;Parent=MsG0280009169.01.T01 |
| Chr2 | exon | 46804375 | 46804552 | 46804375 | ID=MsG0280009169.01.T01:exon:36796;Parent=MsG0280009169.01.T01 |
| Chr2 | exon | 46804130 | 46804194 | 46804130 | ID=MsG0280009169.01.T01:exon:36797;Parent=MsG0280009169.01.T01 |
| Chr2 | exon | 46803859 | 46803941 | 46803859 | ID=MsG0280009169.01.T01:exon:36798;Parent=MsG0280009169.01.T01 |
| Chr2 | exon | 46803415 | 46803520 | 46803415 | ID=MsG0280009169.01.T01:exon:36799;Parent=MsG0280009169.01.T01 |
| Chr2 | exon | 46803226 | 46803258 | 46803226 | ID=MsG0280009169.01.T01:exon:36800;Parent=MsG0280009169.01.T01 |
| Chr2 | five_prime_UTR | 46805589 | 46805600 | 46805589 | ID=MsG0280009169.01.T01:five_prime_utr;Parent=MsG0280009169.01.T01 |
| Chr2 | CDS | 46805355 | 46805588 | 46805355 | ID=MsG0280009169.01.T01:cds;Parent=MsG0280009169.01.T01 |
| Chr2 | CDS | 46804375 | 46804552 | 46804375 | ID=MsG0280009169.01.T01:cds;Parent=MsG0280009169.01.T01 |
| Chr2 | CDS | 46804130 | 46804194 | 46804130 | ID=MsG0280009169.01.T01:cds;Parent=MsG0280009169.01.T01 |
| Chr2 | CDS | 46803859 | 46803941 | 46803859 | ID=MsG0280009169.01.T01:cds;Parent=MsG0280009169.01.T01 |
| Chr2 | CDS | 46803415 | 46803520 | 46803415 | ID=MsG0280009169.01.T01:cds;Parent=MsG0280009169.01.T01 |
| Chr2 | CDS | 46803226 | 46803258 | 46803226 | ID=MsG0280009169.01.T01:cds;Parent=MsG0280009169.01.T01 |
| Gene Sequence |
| Protein sequence |
