AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007976.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007976.01.T01 MTR_2g436530 98.473 131 2 0 53 183 113 243 1.71e-86 276
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007976.01.T01 AT3G06880 51.087 92 30 3 53 143 129 206 1.07e-19 87.0
MsG0280007976.01.T01 AT3G06880 51.087 92 30 3 53 143 129 206 1.14e-19 87.0
MsG0280007976.01.T01 AT3G06880 51.087 92 30 3 53 143 129 206 1.15e-19 87.0
MsG0280007976.01.T01 AT3G06880 51.087 92 30 3 53 143 129 206 1.16e-19 86.7
MsG0280007976.01.T01 AT3G06880 51.087 92 30 3 53 143 129 206 1.18e-19 86.7

Find 233 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAGTAAGGATTGAAATTT+TGG 0.093262 2:+23869135 None:intergenic
TTGAAAAGGTCTGGGATATT+AGG 0.147477 2:-23870282 MsG0280007976.01.T01:three_prime_UTR
GACTGAGAAGTAAGATTAAA+AGG 0.149062 2:-23871765 MsG0280007976.01.T01:three_prime_UTR
TGCAATATGCCTCAAGGATT+TGG 0.189007 2:+23870864 None:intergenic
TATTATCAGGTCATGCTTTA+TGG 0.194808 2:-23875309 MsG0280007976.01.T01:CDS
TTCATTAAAGGATGTGATTT+TGG 0.214261 2:-23874134 MsG0280007976.01.T01:three_prime_UTR
TACCTTCAAGGCAATTTAAT+AGG 0.220567 2:+23869790 None:intergenic
GTCCTATCCAATCTTTATTA+TGG 0.234183 2:-23875730 MsG0280007976.01.T01:exon
TGAAATAATAAAACCTGTTT+TGG 0.251566 2:-23870488 MsG0280007976.01.T01:three_prime_UTR
CAGAGAATTCAAAGAATTCT+TGG 0.259484 2:+23875761 None:intergenic
TTGCTTCCTCCACTTCTTGT+AGG 0.270140 2:+23869330 None:intergenic
CAAGACATTCAAGATTTCTT+TGG 0.273832 2:+23870030 None:intergenic
TGAAAAGGTCTGGGATATTA+GGG 0.280466 2:-23870281 MsG0280007976.01.T01:three_prime_UTR
AACTAATTATGGTTCATTAA+AGG 0.283072 2:-23874146 MsG0280007976.01.T01:three_prime_UTR
AGTTCATCAGGAACTAATTA+TGG 0.287185 2:-23874157 MsG0280007976.01.T01:three_prime_UTR
TCGTTGAACCATCCGTTATC+AGG 0.305392 2:+23869702 None:intergenic
CAAGATTCGATCATAGAATT+TGG 0.312692 2:+23870378 None:intergenic
ATTTGCAAAATCATAATTCA+TGG 0.315925 2:+23868126 None:intergenic
AGGTTAAAAGATCTTTGTTC+TGG 0.318563 2:+23875670 None:intergenic
CTAATCTTTGTTGTAATACT+AGG 0.322044 2:+23868609 None:intergenic
CATACAATCTCTACTAATAT+TGG 0.326616 2:+23873879 None:intergenic
TCTTACCACCATGATGATTA+AGG 0.328662 2:+23870781 None:intergenic
GCAACAACCAAGTAATGATT+TGG 0.336543 2:+23875580 None:intergenic
TCATATGAATTAAATGCATT+TGG 0.350368 2:+23868529 None:intergenic
ACCCTATTAAATTGCCTTGA+AGG 0.351407 2:-23869792 MsG0280007976.01.T01:three_prime_UTR
TAGGCTACAATTGAATTGAT+AGG 0.352507 2:+23869301 None:intergenic
TTTCGTATCAGTTTGATGAT+AGG 0.352567 2:+23872409 None:intergenic
ACCTTCAAGGCAATTTAATA+GGG 0.352683 2:+23869791 None:intergenic
TCATCTTCATCAAGCATTGC+TGG 0.354572 2:+23875619 None:intergenic
AAACTCAAGCGCCGTGCATT+TGG 0.358216 2:+23873532 None:intergenic
CTCATCAGCAGGCAGCATTC+AGG 0.358757 2:-23869053 MsG0280007976.01.T01:intron
ATTACCAATGTCTGTGAGTA+TGG 0.362751 2:+23868438 None:intergenic
GCAATATGCCTCAAGGATTT+GGG 0.365233 2:+23870865 None:intergenic
TGGAATGGATGAAAGACTTT+TGG 0.365768 2:-23871616 MsG0280007976.01.T01:three_prime_UTR
GATCATGGAAAGTTATATAT+TGG 0.368145 2:-23869496 MsG0280007976.01.T01:three_prime_UTR
TGGTTTCTCCGAAGCTTGTT+TGG 0.374157 2:-23875479 MsG0280007976.01.T01:CDS
CATTATCTCCTTTGTCAGTA+AGG 0.375083 2:+23869122 None:intergenic
GAAGCATGAAAATAGAAGTT+TGG 0.375640 2:-23875418 MsG0280007976.01.T01:CDS
TCAGTCCTCTCTCTAAACTA+TGG 0.379138 2:+23871782 None:intergenic
GTATATACACAACACACAAT+AGG 0.379166 2:-23869371 MsG0280007976.01.T01:three_prime_UTR
ACCCCTGACCGTACCAAAAC+AGG 0.382236 2:+23870475 None:intergenic
ACAGTCCCTTGTAGTATATA+GGG 0.383505 2:+23870690 None:intergenic
CAATTATATTATGTAAACTT+AGG 0.387356 2:+23870402 None:intergenic
AATTGAGCAATTTCTGCATC+TGG 0.388348 2:-23871641 MsG0280007976.01.T01:three_prime_UTR
TCCAGTGTATTTATATCTAT+AGG 0.389457 2:+23873909 None:intergenic
ATTAAATTGCCTTGAAGGTA+AGG 0.394083 2:-23869787 MsG0280007976.01.T01:three_prime_UTR
GTCTCTAAAAGGTGTAGAAA+TGG 0.396006 2:+23873569 None:intergenic
ACAACAAAGATTAGCCAGTA+TGG 0.396432 2:-23868600 MsG0280007976.01.T01:three_prime_UTR
TGACATGTGTTTAAACACTA+TGG 0.396898 2:+23870436 None:intergenic
TGCTACAAATAACATGCATT+TGG 0.399616 2:-23873746 MsG0280007976.01.T01:three_prime_UTR
CAAGCCATGAGATGGCTATA+AGG 0.401694 2:+23871728 None:intergenic
TTCTAACAACAATAATTTCA+AGG 0.406782 2:-23874049 MsG0280007976.01.T01:three_prime_UTR
GGAGTGTTTGGTGTATTATC+AGG 0.408403 2:-23875322 MsG0280007976.01.T01:CDS
TCTCAACTTCAAAGAGGAAA+TGG 0.408594 2:-23874093 MsG0280007976.01.T01:three_prime_UTR
AAGCTGTGCAGATTCTTCTA+AGG 0.410271 2:-23872563 MsG0280007976.01.T01:three_prime_UTR
TTGGTAATAATTTGAGTAAG+TGG 0.410289 2:-23868423 MsG0280007976.01.T01:three_prime_UTR
ATATTCAGATGGATCAATTA+AGG 0.410367 2:-23870657 MsG0280007976.01.T01:three_prime_UTR
AACAGTCCCTTGTAGTATAT+AGG 0.412005 2:+23870689 None:intergenic
GCATCTGAGATTATATTAAG+AGG 0.412127 2:-23871664 MsG0280007976.01.T01:three_prime_UTR
ATCATTCTATCAAATCTTGC+TGG 0.412306 2:-23872500 MsG0280007976.01.T01:three_prime_UTR
TGATAGACCTCAAATACATA+TGG 0.412630 2:-23875885 MsG0280007976.01.T01:five_prime_UTR
AACATCAACATTTCAATTGA+AGG 0.414130 2:+23868328 None:intergenic
AACTGATACGAAACTTCAAT+TGG 0.414256 2:-23872399 MsG0280007976.01.T01:three_prime_UTR
TAATTCATGGAATAACATAT+TGG 0.414711 2:+23868139 None:intergenic
ATTATAGAGCCAATCTCTAT+AGG 0.415416 2:+23869282 None:intergenic
GAGAGTTTAATGAGTTCATC+AGG 0.417394 2:-23874169 MsG0280007976.01.T01:three_prime_UTR
ACTGAGAAGTAAGATTAAAA+GGG 0.417432 2:-23871764 MsG0280007976.01.T01:three_prime_UTR
TTCAATTCCAAATCATTACT+TGG 0.419488 2:-23875587 MsG0280007976.01.T01:CDS
CAATTGTAGCCTATAGAGAT+TGG 0.424376 2:-23869291 MsG0280007976.01.T01:three_prime_UTR
GCAGAATTACTGAGGCTGTC+TGG 0.430531 2:+23871685 None:intergenic
CTAGTCTGTATGGGACATTA+AGG 0.430769 2:-23870249 MsG0280007976.01.T01:three_prime_UTR
ACATGAAGGTAGCAAAACTA+TGG 0.432995 2:+23869648 None:intergenic
GTCAATGCCATAATAAAGAT+TGG 0.433375 2:+23875723 None:intergenic
TTCGTATCAGTTTGATGATA+GGG 0.434271 2:+23872410 None:intergenic
GACGACTTTCAAACATAACT+TGG 0.435092 2:-23871039 MsG0280007976.01.T01:three_prime_UTR
TGCATGTATAATTATGCCTC+AGG 0.435364 2:-23871585 MsG0280007976.01.T01:three_prime_UTR
GGGTGCTAGTTTCAATCAAC+AGG 0.436268 2:-23875864 MsG0280007976.01.T01:five_prime_UTR
CATGACAAAGCTTTCCATAC+TGG 0.436917 2:+23868586 None:intergenic
ATAGGTTAGCAGCTAAAATC+TGG 0.438837 2:+23873254 None:intergenic
CTAGCACCCATATGTATTTG+AGG 0.440296 2:+23875878 None:intergenic
AGAAGTTACACAGCTGGTAT+TGG 0.441950 2:+23874700 None:intergenic
GCAGCTAAAATCTGGTGATC+AGG 0.446213 2:+23873262 None:intergenic
CAAGATGTATATCAAACTTA+AGG 0.446442 2:-23875792 MsG0280007976.01.T01:five_prime_UTR
GGTGATCAGGTTGTAATTGA+TGG 0.448426 2:+23873275 None:intergenic
GGGCACTCAGCTAGTCTGTA+TGG 0.451177 2:-23870259 MsG0280007976.01.T01:three_prime_UTR
TATATACACAACACACAATA+GGG 0.451595 2:-23869370 MsG0280007976.01.T01:three_prime_UTR
AATTCATTCCAAACAAGCTT+CGG 0.453656 2:+23875471 None:intergenic
ATGTGTCTAACTGAATCAAT+AGG 0.453825 2:+23873236 None:intergenic
AATCAATGAAGCAATTGTTA+AGG 0.454034 2:-23875364 MsG0280007976.01.T01:CDS
GTGGATAGTCCTTACCTTCA+AGG 0.459455 2:+23869778 None:intergenic
AAGGAGGTACAAGGAGTGTT+TGG 0.460275 2:-23875334 MsG0280007976.01.T01:CDS
GTACCACAAAATAATGTCAT+TGG 0.467337 2:+23868814 None:intergenic
AGGTCGCACTCTAGATGTTC+AGG 0.471778 2:+23869734 None:intergenic
ATCACATCTTGAGGATCCAT+TGG 0.473144 2:+23874498 None:intergenic
ATCTTGCTGGCACATACGCT+TGG 0.475664 2:-23872487 MsG0280007976.01.T01:three_prime_UTR
AGGTGTAGAAATGGAGCAAG+AGG 0.476498 2:+23873578 None:intergenic
ATTATCTTAGAATTTGAGTT+GGG 0.477292 2:-23869822 MsG0280007976.01.T01:three_prime_UTR
CACAGAAACTGACATTAGTT+AGG 0.478080 2:+23870527 None:intergenic
GATACGAAACTTCAATTGGT+TGG 0.479232 2:-23872395 MsG0280007976.01.T01:three_prime_UTR
AATGCAAGTAAGCATGTTGA+AGG 0.479603 2:-23869262 MsG0280007976.01.T01:three_prime_UTR
TTTCCATTTGTTCAGATCAT+CGG 0.482821 2:-23873368 MsG0280007976.01.T01:intron
TTACTTCATGTCATAAATCA+AGG 0.489063 2:+23869904 None:intergenic
GACAAGTAATAAGTGATGTA+AGG 0.489631 2:+23868485 None:intergenic
CTTCCTCCACTTCTTGTAGG+TGG 0.497172 2:+23869333 None:intergenic
CTTATAGCCATCTCATGGCT+TGG 0.498737 2:-23871727 MsG0280007976.01.T01:three_prime_UTR
AAAGATTGGATAGGACTGAT+TGG 0.500339 2:+23875737 None:intergenic
CTGCTGATGAGCTAGAGATT+AGG 0.501952 2:+23869065 None:intergenic
TCGCATCACCTTAATCATCA+TGG 0.502339 2:-23870789 MsG0280007976.01.T01:three_prime_UTR
GCATGGCTTCTGAGAAAGAC+AGG 0.504014 2:-23872443 MsG0280007976.01.T01:three_prime_UTR
CCTGAGTGGCTGCCTGATAA+CGG 0.507053 2:-23869714 MsG0280007976.01.T01:three_prime_UTR
TCAGTTGTTAGGAAGCTTCA+AGG 0.508700 2:-23875543 MsG0280007976.01.T01:CDS
TGTGCGCGCAAATGATGAAC+TGG 0.509995 2:+23869987 None:intergenic
TTGCTTTATCGATTTCAAAA+CGG 0.512285 2:-23874401 MsG0280007976.01.T01:three_prime_UTR
TCTTTGTTGTAATACTAGGC+TGG 0.514010 2:+23868613 None:intergenic
TGTAATACTAGGCTGGCAAA+AGG 0.515096 2:+23868620 None:intergenic
GCAATTCTCGGAAGGAGTAA+AGG 0.515138 2:-23871071 MsG0280007976.01.T01:three_prime_UTR
AGCAATTTCTGCATCTGGAG+TGG 0.518065 2:-23871636 MsG0280007976.01.T01:three_prime_UTR
AATATTTAGGGAAACAAAAG+TGG 0.520009 2:+23874546 None:intergenic
TACTGAGAAGGGACTAATCA+AGG 0.523834 2:-23868794 MsG0280007976.01.T01:intron
CTGCACAGACTCAAGCATAC+AGG 0.525550 2:-23869473 MsG0280007976.01.T01:intron
ACTTTCAAACATAACTTGGA+TGG 0.525741 2:-23871035 MsG0280007976.01.T01:three_prime_UTR
TGCTTTATGGAGAGATTCCA+TGG 0.525779 2:-23875296 MsG0280007976.01.T01:CDS
GGAGATTATCAGCAGGGAGC+AGG 0.526014 2:-23868856 MsG0280007976.01.T01:three_prime_UTR
TGGTCAATCTGCTTGAATCA+AGG 0.526245 2:+23874442 None:intergenic
TATAATTATGCCTCAGGGAA+AGG 0.526256 2:-23871579 MsG0280007976.01.T01:intron
GGTCCACTGATAAAACCATA+AGG 0.526345 2:-23870167 MsG0280007976.01.T01:three_prime_UTR
GAATGCATGGCAATGGATCA+TGG 0.527571 2:-23869511 MsG0280007976.01.T01:three_prime_UTR
GCCACTAGACAGTCTTTAAG+TGG 0.528301 2:-23870189 MsG0280007976.01.T01:three_prime_UTR
AGGAGATAATGTGGTAGCCA+TGG 0.528745 2:-23869110 MsG0280007976.01.T01:three_prime_UTR
TCCTATAGATATAAATACAC+TGG 0.530362 2:-23873910 MsG0280007976.01.T01:three_prime_UTR
TCCAAGTGTATCATAAGTGT+TGG 0.530731 2:-23871815 MsG0280007976.01.T01:three_prime_UTR
GGAAGCTTCAAGGTGATGAA+TGG 0.531953 2:-23875533 MsG0280007976.01.T01:CDS
AAAAGACTTTCACAAAGTTG+AGG 0.535670 2:+23875444 None:intergenic
TCTTGAAGTAATAGTCATGA+AGG 0.536252 2:-23870012 MsG0280007976.01.T01:three_prime_UTR
TGATTGAATGTAGCACATAT+CGG 0.536656 2:-23868397 MsG0280007976.01.T01:three_prime_UTR
CCGTTATCAGGCAGCCACTC+AGG 0.537258 2:+23869714 None:intergenic
CATTTCTAGTAACCAACAAA+AGG 0.539460 2:-23875967 MsG0280007976.01.T01:five_prime_UTR
GTATTTATATCTATAGGAGA+TGG 0.541395 2:+23873915 None:intergenic
TGCTTGCGTGATCAAAGAGA+TGG 0.543523 2:+23874301 None:intergenic
ATCAAACCACCTACAAGAAG+TGG 0.543682 2:-23869339 MsG0280007976.01.T01:three_prime_UTR
TATTATCTTAGAATTTGAGT+TGG 0.544508 2:-23869823 MsG0280007976.01.T01:three_prime_UTR
GATAGACCTCAAATACATAT+GGG 0.547038 2:-23875884 MsG0280007976.01.T01:five_prime_UTR
ATTGATTCAGTTAGACACAT+TGG 0.549208 2:-23873233 MsG0280007976.01.T01:intron
TCCAACACTTATGATACACT+TGG 0.549830 2:+23871814 None:intergenic
AGGATACAAGCATAGATGTA+TGG 0.550730 2:-23871850 MsG0280007976.01.T01:three_prime_UTR
TCATCTTAGAACTTTCTTCG+CGG 0.551550 2:+23874254 None:intergenic
TGTTCTTGCATCACATCTTG+AGG 0.552144 2:+23874489 None:intergenic
AAACATAACTTGGATGGCTG+AGG 0.552711 2:-23871029 MsG0280007976.01.T01:three_prime_UTR
TAATGTGGTAGCCATGGAAG+TGG 0.552834 2:-23869104 MsG0280007976.01.T01:three_prime_UTR
TCACATCTTGAGGATCCATT+GGG 0.555382 2:+23874499 None:intergenic
GGATGGCTGAGGAGTTACAT+AGG 0.556151 2:-23871018 MsG0280007976.01.T01:three_prime_UTR
TGAAGCAATTGTTAAGGAGA+AGG 0.556575 2:-23875358 MsG0280007976.01.T01:CDS
ATTGAAGTTCTTCTTACAGA+GGG 0.557990 2:+23868685 None:intergenic
ATTTCAATCCTTACTGACAA+AGG 0.559066 2:-23869130 MsG0280007976.01.T01:three_prime_UTR
GGAGAAGGCAAGGAGGTACA+AGG 0.559331 2:-23875343 MsG0280007976.01.T01:CDS
ATAAGTCCACTGAGAACTGA+GGG 0.561225 2:+23873710 None:intergenic
CTAATCTCTAGCTCATCAGC+AGG 0.564405 2:-23869064 MsG0280007976.01.T01:three_prime_UTR
TGTTGAAGGAACAACATTCA+AGG 0.565707 2:-23869248 MsG0280007976.01.T01:intron
TGATTTAAATTGCCGTGTCG+AGG 0.566562 2:-23874361 MsG0280007976.01.T01:three_prime_UTR
GTATGGGAAGGTTCACCCAA+TGG 0.567986 2:-23874514 MsG0280007976.01.T01:three_prime_UTR
TTATTCAGTGGATATTCAGA+TGG 0.569900 2:-23870668 MsG0280007976.01.T01:three_prime_UTR
GCTGGCACATACGCTTGGAC+AGG 0.571251 2:-23872482 MsG0280007976.01.T01:three_prime_UTR
AGCATGGGAATGCATGGCAA+TGG 0.571680 2:-23869518 MsG0280007976.01.T01:three_prime_UTR
CTAACTAATGTCAGTTTCTG+TGG 0.573391 2:-23870526 MsG0280007976.01.T01:three_prime_UTR
GCATTTAATTCATATGACAA+AGG 0.573550 2:-23868523 MsG0280007976.01.T01:three_prime_UTR
TGATGAGAGAGATACTGAGA+AGG 0.575709 2:+23875933 None:intergenic
GGCACTCAGCTAGTCTGTAT+GGG 0.578075 2:-23870258 MsG0280007976.01.T01:three_prime_UTR
CAATTCCATAGTTTAGAGAG+AGG 0.578377 2:-23871787 MsG0280007976.01.T01:three_prime_UTR
TATCGACAAGTGTCAGACAT+TGG 0.579174 2:-23868356 MsG0280007976.01.T01:three_prime_UTR
AAGTTGGGGAGATTATCAGC+AGG 0.579209 2:-23868863 MsG0280007976.01.T01:three_prime_UTR
AAGGTAAGCATGGGAATGCA+TGG 0.579453 2:-23869524 MsG0280007976.01.T01:three_prime_UTR
GAAGTCTTCTACCACTTCCA+TGG 0.580259 2:+23869093 None:intergenic
CATACACAAATCCTTGAGGC+AGG 0.584365 2:-23870739 MsG0280007976.01.T01:three_prime_UTR
TGTTAGTTCTTTGAATTCTG+AGG 0.586035 2:-23875391 MsG0280007976.01.T01:CDS
TTTGCTCCCTATATACTACA+AGG 0.588162 2:-23870696 MsG0280007976.01.T01:three_prime_UTR
GAAAAGGTCTGGGATATTAG+GGG 0.589470 2:-23870280 MsG0280007976.01.T01:three_prime_UTR
TGAAGTAGAAGTTACACAGC+TGG 0.590547 2:+23874694 None:intergenic
GTTCATCATTTGCGCGCACA+TGG 0.590944 2:-23869984 MsG0280007976.01.T01:three_prime_UTR
ATCAGTTTGATGATAGGGAG+AGG 0.591166 2:+23872415 None:intergenic
ATTGATATCTGAAGAAAGCT+CGG 0.591248 2:-23872538 MsG0280007976.01.T01:three_prime_UTR
TTGACATCCAAGCCATGAGA+TGG 0.591635 2:+23871720 None:intergenic
GTCCACTGATAAAACCATAA+GGG 0.592645 2:-23870166 MsG0280007976.01.T01:intron
AAATGTTCGTGCCAAATGCA+CGG 0.597360 2:-23873543 MsG0280007976.01.T01:three_prime_UTR
TAAAGTTGCAATATGCCTCA+AGG 0.597644 2:+23870858 None:intergenic
AAACTAATGCAATTCTCGGA+AGG 0.598492 2:-23871079 MsG0280007976.01.T01:three_prime_UTR
TGAAATGTGGTTATAAGTGG+TGG 0.603140 2:+23869759 None:intergenic
TGCCATAATAAAGATTGGAT+AGG 0.603150 2:+23875728 None:intergenic
GTCTGAAATGTGGTTATAAG+TGG 0.606992 2:+23869756 None:intergenic
TAGTGATCTCAACTTCAAAG+AGG 0.608148 2:-23874099 MsG0280007976.01.T01:three_prime_UTR
TTACATACCTTGGTATGCAT+AGG 0.608413 2:+23873498 None:intergenic
GACACCATACTCACAGACAT+TGG 0.608527 2:-23868442 MsG0280007976.01.T01:three_prime_UTR
ATGTCTGTGAGTATGGTGTC+CGG 0.610084 2:+23868445 None:intergenic
GATGGCTGAGGAGTTACATA+GGG 0.610113 2:-23871017 MsG0280007976.01.T01:three_prime_UTR
CGGCTATTAATCTGCTGCAG+AGG 0.610136 2:-23873348 MsG0280007976.01.T01:three_prime_UTR
TAAAGTTGCGACCTGCCTCA+AGG 0.612599 2:+23870728 None:intergenic
CAATTGTTAAGGAGAAGGCA+AGG 0.616510 2:-23875353 MsG0280007976.01.T01:CDS
TATAAGTCCACTGAGAACTG+AGG 0.616782 2:+23873709 None:intergenic
TACTGACAAAGGAGATAATG+TGG 0.621257 2:-23869119 MsG0280007976.01.T01:three_prime_UTR
TTGATTCAAGCAGATTGACC+AGG 0.623847 2:-23874440 MsG0280007976.01.T01:three_prime_UTR
TACAAGGGACTGTTATTCAG+TGG 0.624611 2:-23870680 MsG0280007976.01.T01:three_prime_UTR
CTGCAATAACTGCTCCACCA+TGG 0.624772 2:+23875279 None:intergenic
ATTTGGTTTGTGTCTGACAA+TGG 0.627175 2:+23868546 None:intergenic
ACTGCCTTATAGCCATCTCA+TGG 0.627304 2:-23871732 MsG0280007976.01.T01:three_prime_UTR
AATTGAAGTTCTTCTTACAG+AGG 0.627594 2:+23868684 None:intergenic
TCAAGTAGCAACGCAGACAC+CGG 0.633837 2:-23868464 MsG0280007976.01.T01:three_prime_UTR
TCTCAAACAGATCTGGTGAG+AGG 0.635410 2:-23868895 MsG0280007976.01.T01:intron
AGATGTTCAGGTCTGAAATG+TGG 0.644516 2:+23869746 None:intergenic
CCACTAGACAGTCTTTAAGT+GGG 0.644865 2:-23870188 MsG0280007976.01.T01:three_prime_UTR
TCAAAGAGATGGAATTCTAG+TGG 0.647117 2:+23874312 None:intergenic
GCAAGCAGAAATCATAGACT+CGG 0.647387 2:-23874285 MsG0280007976.01.T01:three_prime_UTR
GCATGTATAATTATGCCTCA+GGG 0.650931 2:-23871584 MsG0280007976.01.T01:three_prime_UTR
AAACCACCTACAAGAAGTGG+AGG 0.651038 2:-23869336 MsG0280007976.01.T01:three_prime_UTR
AGGAAATCCTATGCATACCA+AGG 0.652752 2:-23873505 MsG0280007976.01.T01:intron
AAAAGGTCTGGGATATTAGG+GGG 0.654328 2:-23870279 MsG0280007976.01.T01:three_prime_UTR
GAGAATCATATACAGCTGCA+TGG 0.660155 2:-23872460 MsG0280007976.01.T01:three_prime_UTR
AGTGGCTGCCTGATAACGGA+TGG 0.664359 2:-23869710 MsG0280007976.01.T01:three_prime_UTR
CAGTTCCCCTCAGTTCTCAG+TGG 0.669518 2:-23873716 MsG0280007976.01.T01:three_prime_UTR
TGTTCATACACAAATCCTTG+AGG 0.673649 2:-23870743 MsG0280007976.01.T01:three_prime_UTR
TTTCTGCATCTGGAGTGGAA+TGG 0.675183 2:-23871631 MsG0280007976.01.T01:three_prime_UTR
AGTTGGGGAGATTATCAGCA+GGG 0.676228 2:-23868862 MsG0280007976.01.T01:three_prime_UTR
TGTTCACACCCAAATCCTTG+AGG 0.676521 2:-23870873 MsG0280007976.01.T01:three_prime_UTR
TTGCTCCCTATATACTACAA+GGG 0.677608 2:-23870695 MsG0280007976.01.T01:three_prime_UTR
CCCACTTAAAGACTGTCTAG+TGG 0.680773 2:+23870188 None:intergenic
TCTCAGATGCAGAATTACTG+AGG 0.682745 2:+23871677 None:intergenic
CGATTAATAAATCCTCGACA+CGG 0.692393 2:+23874349 None:intergenic
CATCTAGAGTGCGACCTGAG+TGG 0.700387 2:-23869728 MsG0280007976.01.T01:three_prime_UTR
ATCATCAATGATGCTGCATG+AGG 0.714753 2:+23873799 None:intergenic
CATCACCTTAATCATCATGG+TGG 0.719754 2:-23870786 MsG0280007976.01.T01:three_prime_UTR
GGAGCAAGAGGAGTGAACTG+TGG 0.727348 2:+23873590 None:intergenic
TTGTTAAGGAGAAGGCAAGG+AGG 0.739913 2:-23875350 MsG0280007976.01.T01:CDS
AAGGACAATACCTTTCCCTG+AGG 0.763391 2:+23871569 None:intergenic
TAAGTCCACTGAGAACTGAG+GGG 0.768256 2:+23873711 None:intergenic
TTTATGGAGAGATTCCATGG+TGG 0.847791 2:-23875293 MsG0280007976.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGAAAAGATAATATTAT+TGG - Chr2:23869331-23869350 MsG0280007976.01.T01:three_prime_UTR 10.0%
!! TTCATAAAAATTTAATTGAT+AGG - Chr2:23871509-23871528 MsG0280007976.01.T01:intron 10.0%
!!! AAAAAAATGTTATTTTCTTT+TGG - Chr2:23875945-23875964 MsG0280007976.01.T01:five_prime_UTR 10.0%
!!! AAGAAAATAACATTTTTTTA+CGG + Chr2:23875944-23875963 None:intergenic 10.0%
!!! ATACTCAATTTTTAATAAAT+TGG + Chr2:23871131-23871150 None:intergenic 10.0%
!! AAAAGAATTAAAAAGATTAC+CGG + Chr2:23871950-23871969 None:intergenic 15.0%
!! CAATTATATTATGTAAACTT+AGG + Chr2:23873767-23873786 None:intergenic 15.0%
!! TATGAAATAAAATAGAAGAA+AGG + Chr2:23871495-23871514 None:intergenic 15.0%
!!! CATCATTTTCTTAAATAAAT+CGG + Chr2:23872988-23873007 None:intergenic 15.0%
!!! TCAGAAAAATTTAAGTTTAT+AGG - Chr2:23870969-23870988 MsG0280007976.01.T01:three_prime_UTR 15.0%
!!! TTGACATATATAATCATTTT+TGG + Chr2:23871819-23871838 None:intergenic 15.0%
!!! TTTTATAGATAATGTTTTCT+AGG + Chr2:23868176-23868195 None:intergenic 15.0%
!!! TTTTGGTTAATTTTTTCATA+GGG + Chr2:23875217-23875236 None:intergenic 15.0%
!! AACTAATTATGGTTCATTAA+AGG - Chr2:23870020-23870039 MsG0280007976.01.T01:three_prime_UTR 20.0%
!! AGGACATAAATAATAGTATT+AGG + Chr2:23875151-23875170 None:intergenic 20.0%
!! AGTTTAAATATTCCATTGAA+AGG + Chr2:23871465-23871484 None:intergenic 20.0%
!! GTTTAAATATTCCATTGAAA+GGG + Chr2:23871464-23871483 None:intergenic 20.0%
!! TAATAAAATTCATAACATGC+AGG - Chr2:23872296-23872315 MsG0280007976.01.T01:intron 20.0%
!! TAATTCATGGAATAACATAT+TGG + Chr2:23876030-23876049 None:intergenic 20.0%
!! TATTATCTTAGAATTTGAGT+TGG - Chr2:23874343-23874362 MsG0280007976.01.T01:three_prime_UTR 20.0%
!! TCATATGAATTAAATGCATT+TGG + Chr2:23875640-23875659 None:intergenic 20.0%
!! TTCTAACAACAATAATTTCA+AGG - Chr2:23870117-23870136 MsG0280007976.01.T01:intron 20.0%
!!! AAATGTTAGACATTAGTTTT+AGG + Chr2:23875437-23875456 None:intergenic 20.0%
!!! AAGCCAAATACTTTTAAAAA+TGG - Chr2:23871864-23871883 MsG0280007976.01.T01:intron 20.0%
!!! AAGGTTAAAACTTTCTTTTA+TGG - Chr2:23874024-23874043 MsG0280007976.01.T01:three_prime_UTR 20.0%
!!! AATGTTAGACATTAGTTTTA+GGG + Chr2:23875436-23875455 None:intergenic 20.0%
!!! ATGACATGATACTTTATTTT+AGG - Chr2:23874771-23874790 MsG0280007976.01.T01:intron 20.0%
!!! ATGTTATTTTCTTTTGGAAA+AGG - Chr2:23875951-23875970 MsG0280007976.01.T01:five_prime_UTR 20.0%
!!! ATTATCTTAGAATTTGAGTT+GGG - Chr2:23874344-23874363 MsG0280007976.01.T01:three_prime_UTR 20.0%
!!! CAAAAACTATTGTTTTGAAA+AGG - Chr2:23873870-23873889 MsG0280007976.01.T01:three_prime_UTR 20.0%
!!! GAAATAAGAGATATTTTCAA+AGG - Chr2:23874623-23874642 MsG0280007976.01.T01:CDS 20.0%
!!! GTTTTGGTTAATTTTTTCAT+AGG + Chr2:23875218-23875237 None:intergenic 20.0%
!!! TAATTTTAAAAAACGGTTTG+AGG + Chr2:23871409-23871428 None:intergenic 20.0%
!!! TCTCCATTTTTAAAAGTATT+TGG + Chr2:23871870-23871889 None:intergenic 20.0%
!!! TGAAATAATAAAACCTGTTT+TGG - Chr2:23873678-23873697 MsG0280007976.01.T01:three_prime_UTR 20.0%
! AACAATACAAATGAAAGAAC+TGG + Chr2:23870702-23870721 None:intergenic 25.0%
! AACATCAACATTTCAATTGA+AGG + Chr2:23875841-23875860 None:intergenic 25.0%
! AAGGGAAAAATATTCTTCTA+TGG + Chr2:23871446-23871465 None:intergenic 25.0%
! AATAGTTTGAGGAATAAAGT+AGG - Chr2:23868976-23868995 MsG0280007976.01.T01:intron 25.0%
! AATATTTAGGGAAACAAAAG+TGG + Chr2:23869623-23869642 None:intergenic 25.0%
! AATCAATGAAGCAATTGTTA+AGG - Chr2:23868802-23868821 MsG0280007976.01.T01:three_prime_UTR 25.0%
! AATTAAGTGTTTATCCAAAC+TGG - Chr2:23872908-23872927 MsG0280007976.01.T01:intron 25.0%
! ACACTTAATTAAGTGCTTAT+AGG + Chr2:23872898-23872917 None:intergenic 25.0%
! ACTGAGAAGTAAGATTAAAA+GGG - Chr2:23872402-23872421 MsG0280007976.01.T01:three_prime_UTR 25.0%
! ACTTTATACGAATAAGTATC+CGG + Chr2:23871924-23871943 None:intergenic 25.0%
! ATACTGCCACAAAAATATTT+AGG + Chr2:23869636-23869655 None:intergenic 25.0%
! ATAGAAGATGTGAAGAAAAA+AGG - Chr2:23870152-23870171 MsG0280007976.01.T01:intron 25.0%
! ATAGTTTGAGGAATAAAGTA+GGG - Chr2:23868977-23868996 MsG0280007976.01.T01:intron 25.0%
! ATATTCAGATGGATCAATTA+AGG - Chr2:23873509-23873528 MsG0280007976.01.T01:three_prime_UTR 25.0%
! ATCACTTGGTTTATTATGAA+AGG - Chr2:23869188-23869207 MsG0280007976.01.T01:intron 25.0%
! ATGTGAAGAAAAAAGGTTTA+AGG - Chr2:23870159-23870178 MsG0280007976.01.T01:intron 25.0%
! CAAAATAGAAAAATGTTGCT+GGG - Chr2:23873612-23873631 MsG0280007976.01.T01:three_prime_UTR 25.0%
! CAAACATCATTAGAAAAATG+TGG - Chr2:23869940-23869959 MsG0280007976.01.T01:three_prime_UTR 25.0%
! CAAGATGTATATCAAACTTA+AGG - Chr2:23868374-23868393 MsG0280007976.01.T01:three_prime_UTR 25.0%
! CATACAATCTCTACTAATAT+TGG + Chr2:23870290-23870309 None:intergenic 25.0%
! CCTCATAAAAAAAAATGACA+AGG + Chr2:23872619-23872638 None:intergenic 25.0%
! CTTATTCGTATAAAGTTATC+CGG - Chr2:23871928-23871947 MsG0280007976.01.T01:intron 25.0%
! GAAAGGTTAATTAGCTAAAT+AGG - Chr2:23869205-23869224 MsG0280007976.01.T01:intron 25.0%
! GAATGTAATTGAGTAGAATT+TGG - Chr2:23870724-23870743 MsG0280007976.01.T01:three_prime_UTR 25.0%
! GATCATGGAAAGTTATATAT+TGG - Chr2:23874670-23874689 MsG0280007976.01.T01:CDS 25.0%
! GCATTTAATTCATATGACAA+AGG - Chr2:23875643-23875662 MsG0280007976.01.T01:CDS 25.0%
! GTATTTATATCTATAGGAGA+TGG + Chr2:23870254-23870273 None:intergenic 25.0%
! GTCTTGGATAATAAAAACAT+GGG - Chr2:23874539-23874558 MsG0280007976.01.T01:three_prime_UTR 25.0%
! GTTCTTTCATTTGTATTGTT+TGG - Chr2:23870702-23870721 MsG0280007976.01.T01:three_prime_UTR 25.0%
! TACAATAACATGCACATAAT+AGG - Chr2:23874100-23874119 MsG0280007976.01.T01:three_prime_UTR 25.0%
! TACTGAAAAACAAGGAATAA+AGG - Chr2:23874223-23874242 MsG0280007976.01.T01:three_prime_UTR 25.0%
! TACTGCCACAAAAATATTTA+GGG + Chr2:23869635-23869654 None:intergenic 25.0%
! TATATACACAACACACAATA+GGG - Chr2:23874796-23874815 MsG0280007976.01.T01:intron 25.0%
! TCCAGTGTATTTATATCTAT+AGG + Chr2:23870260-23870279 None:intergenic 25.0%
! TCCTATAGATATAAATACAC+TGG - Chr2:23870256-23870275 MsG0280007976.01.T01:three_prime_UTR 25.0%
! TGTCTTGGATAATAAAAACA+TGG - Chr2:23874538-23874557 MsG0280007976.01.T01:three_prime_UTR 25.0%
! TTACTTCATGTCATAAATCA+AGG + Chr2:23874265-23874284 None:intergenic 25.0%
! TTAGGGAAATAAATAACAAG+AGG + Chr2:23875419-23875438 None:intergenic 25.0%
! TTATTGCAAACAAACATGAA+TGG - Chr2:23869241-23869260 MsG0280007976.01.T01:intron 25.0%
! TTCAATTCCAAATCATTACT+TGG - Chr2:23868579-23868598 MsG0280007976.01.T01:three_prime_UTR 25.0%
! TTTGATATTGCTGTCTAATA+TGG - Chr2:23871207-23871226 MsG0280007976.01.T01:intron 25.0%
! TTTGTTAAGTAACATAACTG+AGG + Chr2:23872652-23872671 None:intergenic 25.0%
!! AGAATATTTTTCCCTTTCAA+TGG - Chr2:23871450-23871469 MsG0280007976.01.T01:intron 25.0%
!! ATATTTTCAAAGGTAAGCAT+GGG - Chr2:23874633-23874652 MsG0280007976.01.T01:CDS 25.0%
!! ATTTTTATCTCTCAGTTGTT+AGG - Chr2:23868612-23868631 MsG0280007976.01.T01:three_prime_UTR 25.0%
!! CTAATCTTTGTTGTAATACT+AGG + Chr2:23875560-23875579 None:intergenic 25.0%
!! TAGATGTATCTTAGAAGTAT+TGG + Chr2:23871986-23872005 None:intergenic 25.0%
!! TCAGTAAGGATTGAAATTTT+GGG + Chr2:23875033-23875052 None:intergenic 25.0%
!! TTCATTAAAGGATGTGATTT+TGG - Chr2:23870032-23870051 MsG0280007976.01.T01:three_prime_UTR 25.0%
!! TTGGTAATAATTTGAGTAAG+TGG - Chr2:23875743-23875762 MsG0280007976.01.T01:five_prime_UTR 25.0%
!! TTTTATTATCCAAGACATGA+AGG + Chr2:23874535-23874554 None:intergenic 25.0%
!!! AAATATTTTTGTGGCAGTAT+GGG - Chr2:23869636-23869655 MsG0280007976.01.T01:three_prime_UTR 25.0%
!!! AAATCAACTGTGTTTTTAGT+TGG + Chr2:23872021-23872040 None:intergenic 25.0%
!!! AATACTTCTAAGATACATCT+AGG - Chr2:23871985-23872004 MsG0280007976.01.T01:intron 25.0%
!!! ACTTCTTTTTTTTTTTTCCG+CGG + Chr2:23875184-23875203 None:intergenic 25.0%
!!! CCTTGTCATTTTTTTTTATG+AGG - Chr2:23872616-23872635 MsG0280007976.01.T01:intron 25.0%
!!! TAAATATTTTTGTGGCAGTA+TGG - Chr2:23869635-23869654 MsG0280007976.01.T01:three_prime_UTR 25.0%
!!! TAATAAAACCTGTTTTGGTA+CGG - Chr2:23873683-23873702 MsG0280007976.01.T01:three_prime_UTR 25.0%
!!! TACATGGATGGATTATATAT+AGG - Chr2:23874987-23875006 MsG0280007976.01.T01:intron 25.0%
!!! TGTTTCCCTAAATATTTTTG+TGG - Chr2:23869627-23869646 MsG0280007976.01.T01:three_prime_UTR 25.0%
!!! TTGCTTTATCGATTTCAAAA+CGG - Chr2:23869765-23869784 MsG0280007976.01.T01:three_prime_UTR 25.0%
!!! TTTTGAAGTTCAATAGTTTG+AGG - Chr2:23868965-23868984 MsG0280007976.01.T01:intron 25.0%
AAAAGACTTTCACAAAGTTG+AGG + Chr2:23868725-23868744 None:intergenic 30.0%
AACAAATTCTCAAACAGATC+TGG - Chr2:23875264-23875283 MsG0280007976.01.T01:CDS 30.0%
AACTGATACGAAACTTCAAT+TGG - Chr2:23871767-23871786 MsG0280007976.01.T01:three_prime_UTR 30.0%
AAGTCACTAAATGATACGTT+TGG - Chr2:23871152-23871171 MsG0280007976.01.T01:intron 30.0%
AATTCATTCCAAACAAGCTT+CGG + Chr2:23868698-23868717 None:intergenic 30.0%
AATTGAAGTTCTTCTTACAG+AGG + Chr2:23875485-23875504 None:intergenic 30.0%
ACCTTCAAGGCAATTTAATA+GGG + Chr2:23874378-23874397 None:intergenic 30.0%
ACTCTTGCTAATAGAAATCT+TGG + Chr2:23874063-23874082 None:intergenic 30.0%
ACTTTCAAACATAACTTGGA+TGG - Chr2:23873131-23873150 MsG0280007976.01.T01:intron 30.0%
AGGTTAAAAGATCTTTGTTC+TGG + Chr2:23868499-23868518 None:intergenic 30.0%
AGTTCATCAGGAACTAATTA+TGG - Chr2:23870009-23870028 MsG0280007976.01.T01:three_prime_UTR 30.0%
ATCATTCTATCAAATCTTGC+TGG - Chr2:23871666-23871685 MsG0280007976.01.T01:three_prime_UTR 30.0%
ATGTGTCTAACTGAATCAAT+AGG + Chr2:23870933-23870952 None:intergenic 30.0%
ATTAAATTGCCTTGAAGGTA+AGG - Chr2:23874379-23874398 MsG0280007976.01.T01:three_prime_UTR 30.0%
ATTAAGTGCTTATAGGCTAT+AGG + Chr2:23872891-23872910 None:intergenic 30.0%
ATTATAGAGCCAATCTCTAT+AGG + Chr2:23874887-23874906 None:intergenic 30.0%
ATTGAAGTTCTTCTTACAGA+GGG + Chr2:23875484-23875503 None:intergenic 30.0%
ATTGATATCTGAAGAAAGCT+CGG - Chr2:23871628-23871647 MsG0280007976.01.T01:three_prime_UTR 30.0%
ATTTCAATCCTTACTGACAA+AGG - Chr2:23875036-23875055 MsG0280007976.01.T01:intron 30.0%
CAAGACATTCAAGATTTCTT+TGG + Chr2:23874139-23874158 None:intergenic 30.0%
CAAGATTCGATCATAGAATT+TGG + Chr2:23873791-23873810 None:intergenic 30.0%
CAGAGAATTCAAAGAATTCT+TGG + Chr2:23868408-23868427 None:intergenic 30.0%
CATATATGTCTTTAGCTAGT+AGG - Chr2:23870749-23870768 MsG0280007976.01.T01:three_prime_UTR 30.0%
CATCAAAGGAGAATATCTTA+TGG - Chr2:23871103-23871122 MsG0280007976.01.T01:intron 30.0%
CTACTAGCTAAAGACATATA+TGG + Chr2:23870751-23870770 None:intergenic 30.0%
CTTAACAAATGTCATGACAA+TGG - Chr2:23872663-23872682 MsG0280007976.01.T01:intron 30.0%
GAAGCATGAAAATAGAAGTT+TGG - Chr2:23868748-23868767 MsG0280007976.01.T01:intron 30.0%
GAATAAGTATCCGGAAATAT+TGG + Chr2:23871915-23871934 None:intergenic 30.0%
GACAAGTAATAAGTGATGTA+AGG + Chr2:23875684-23875703 None:intergenic 30.0%
GACTGAGAAGTAAGATTAAA+AGG - Chr2:23872401-23872420 MsG0280007976.01.T01:three_prime_UTR 30.0%
GATACAATATGACATGGATA+CGG + Chr2:23872212-23872231 None:intergenic 30.0%
GATACAGATACAATATGACA+TGG + Chr2:23872218-23872237 None:intergenic 30.0%
GATAGACCTCAAATACATAT+GGG - Chr2:23868282-23868301 MsG0280007976.01.T01:three_prime_UTR 30.0%
GCAAAAACTAATGCAATTCT+CGG - Chr2:23873083-23873102 MsG0280007976.01.T01:intron 30.0%
GCAAAATAGAAAAATGTTGC+TGG - Chr2:23873611-23873630 MsG0280007976.01.T01:three_prime_UTR 30.0%
GTACCACAAAATAATGTCAT+TGG + Chr2:23875355-23875374 None:intergenic 30.0%
GTAGTTAACAGAATGCAAAT+GGG + Chr2:23871045-23871064 None:intergenic 30.0%
GTATATACACAACACACAAT+AGG - Chr2:23874795-23874814 MsG0280007976.01.T01:intron 30.0%
GTCAATGCCATAATAAAGAT+TGG + Chr2:23868446-23868465 None:intergenic 30.0%
GTCCTATCCAATCTTTATTA+TGG - Chr2:23868436-23868455 MsG0280007976.01.T01:three_prime_UTR 30.0%
TAAGTAACATAACTGAGGTA+AGG + Chr2:23872647-23872666 None:intergenic 30.0%
TACCTTCAAGGCAATTTAAT+AGG + Chr2:23874379-23874398 None:intergenic 30.0%
TAGGCTACAATTGAATTGAT+AGG + Chr2:23874868-23874887 None:intergenic 30.0%
TATTATCAGGTCATGCTTTA+TGG - Chr2:23868857-23868876 MsG0280007976.01.T01:three_prime_UTR 30.0%
TCTTGAAGTAATAGTCATGA+AGG - Chr2:23874154-23874173 MsG0280007976.01.T01:three_prime_UTR 30.0%
TGACATGTGTTTAAACACTA+TGG + Chr2:23873733-23873752 None:intergenic 30.0%
TGATAGACCTCAAATACATA+TGG - Chr2:23868281-23868300 MsG0280007976.01.T01:three_prime_UTR 30.0%
TGATTGAATGTAGCACATAT+CGG - Chr2:23875769-23875788 MsG0280007976.01.T01:five_prime_UTR 30.0%
TGCCATAATAAAGATTGGAT+AGG + Chr2:23868441-23868460 None:intergenic 30.0%
TGCTACAAATAACATGCATT+TGG - Chr2:23870420-23870439 MsG0280007976.01.T01:three_prime_UTR 30.0%
TGTAGTTAACAGAATGCAAA+TGG + Chr2:23871046-23871065 None:intergenic 30.0%
TTATCATGAAGAAAGTCCTA+GGG - Chr2:23871002-23871021 MsG0280007976.01.T01:three_prime_UTR 30.0%
TTATTCAGTGGATATTCAGA+TGG - Chr2:23873498-23873517 MsG0280007976.01.T01:intron 30.0%
TTCGCAATTACTGAAAAACA+AGG - Chr2:23874215-23874234 MsG0280007976.01.T01:three_prime_UTR 30.0%
TTGCTTTCCTACATGAAAAA+TGG + Chr2:23873067-23873086 None:intergenic 30.0%
TTTCCATTTGTTCAGATCAT+CGG - Chr2:23870798-23870817 MsG0280007976.01.T01:three_prime_UTR 30.0%
! AACTTTGCTTTGTTCTTACA+TGG - Chr2:23874971-23874990 MsG0280007976.01.T01:intron 30.0%
! ATTGATTCAGTTAGACACAT+TGG - Chr2:23870933-23870952 MsG0280007976.01.T01:three_prime_UTR 30.0%
! GAACATTTTCTGTCTCTAAA+AGG + Chr2:23870611-23870630 None:intergenic 30.0%
! GATATTTTCAAAGGTAAGCA+TGG - Chr2:23874632-23874651 MsG0280007976.01.T01:CDS 30.0%
! GCATCTGAGATTATATTAAG+AGG - Chr2:23872502-23872521 MsG0280007976.01.T01:three_prime_UTR 30.0%
! GCATTTCTTCTGACTTTTTA+AGG + Chr2:23868519-23868538 None:intergenic 30.0%
! GTCAGTAAGGATTGAAATTT+TGG + Chr2:23875034-23875053 None:intergenic 30.0%
! TAAAGCAACAACATCTTTTG+TGG + Chr2:23869753-23869772 None:intergenic 30.0%
! TCATTTTCTTCAAGCTGTTT+TGG - Chr2:23868667-23868686 MsG0280007976.01.T01:three_prime_UTR 30.0%
! TGAACAAGCTTTTATCAGTT+GGG + Chr2:23871577-23871596 None:intergenic 30.0%
! TGTTAGTTCTTTGAATTCTG+AGG - Chr2:23868775-23868794 MsG0280007976.01.T01:intron 30.0%
! TTCGTATCAGTTTGATGATA+GGG + Chr2:23871759-23871778 None:intergenic 30.0%
! TTTCGTATCAGTTTGATGAT+AGG + Chr2:23871760-23871779 None:intergenic 30.0%
! TTTTGTTAGAACAGATATCC+TGG + Chr2:23873855-23873874 None:intergenic 30.0%
!! AAGTTTTAACCTTACCCTTA+TGG + Chr2:23874017-23874036 None:intergenic 30.0%
!! ATTATTTTGTGGTACTGAGA+AGG - Chr2:23875360-23875379 MsG0280007976.01.T01:CDS 30.0%
!! CATTTCTAGTAACCAACAAA+AGG - Chr2:23868199-23868218 MsG0280007976.01.T01:three_prime_UTR 30.0%
!! GAGGTTAATAATTTGCTAAG+AGG - Chr2:23871067-23871086 MsG0280007976.01.T01:three_prime_UTR 30.0%
!! GGATGGATTATATATAGGAA+TGG - Chr2:23874992-23875011 MsG0280007976.01.T01:intron 30.0%
!! GTGTTGTTTGACATACATTA+TGG - Chr2:23874731-23874750 MsG0280007976.01.T01:intron 30.0%
!! TTATTTTGTGGTACTGAGAA+GGG - Chr2:23875361-23875380 MsG0280007976.01.T01:CDS 30.0%
!!! ACTATTGTTTTGAAAAGGTC+TGG - Chr2:23873875-23873894 MsG0280007976.01.T01:three_prime_UTR 30.0%
!!! CAGTTGATTTTGTGTTGTTT+TGG + Chr2:23875234-23875253 None:intergenic 30.0%
!!! CTATTGTTTTGAAAAGGTCT+GGG - Chr2:23873876-23873895 MsG0280007976.01.T01:three_prime_UTR 30.0%
!!! GTTTTTCAAGTGTTACAAGT+TGG + Chr2:23873222-23873241 None:intergenic 30.0%
!!! TTTTGCTGACTTAGAGAAAA+TGG + Chr2:23873597-23873616 None:intergenic 30.0%
AAACTAATGCAATTCTCGGA+AGG - Chr2:23873087-23873106 MsG0280007976.01.T01:intron 35.0%
AAAGATTGGATAGGACTGAT+TGG + Chr2:23868432-23868451 None:intergenic 35.0%
AACAGTCCCTTGTAGTATAT+AGG + Chr2:23873480-23873499 None:intergenic 35.0%
AATGCAAGTAAGCATGTTGA+AGG - Chr2:23874904-23874923 MsG0280007976.01.T01:intron 35.0%
AATTGAGCAATTTCTGCATC+TGG - Chr2:23872525-23872544 MsG0280007976.01.T01:three_prime_UTR 35.0%
ACAGTCCCTTGTAGTATATA+GGG + Chr2:23873479-23873498 None:intergenic 35.0%
ACATGAAGGTAGCAAAACTA+TGG + Chr2:23874521-23874540 None:intergenic 35.0%
ACATTTCCCAAATTGTCAAC+AGG - Chr2:23875451-23875470 MsG0280007976.01.T01:CDS 35.0%
ACCCTATTAAATTGCCTTGA+AGG - Chr2:23874374-23874393 MsG0280007976.01.T01:three_prime_UTR 35.0%
ACTCAACAAATTCAGCTCTT+AGG - Chr2:23872703-23872722 MsG0280007976.01.T01:intron 35.0%
AGGATACAAGCATAGATGTA+TGG - Chr2:23872316-23872335 MsG0280007976.01.T01:intron 35.0%
ATAGGTTAGCAGCTAAAATC+TGG + Chr2:23870915-23870934 None:intergenic 35.0%
ATGTCCTAAATATAAGTCCG+CGG - Chr2:23875164-23875183 MsG0280007976.01.T01:intron 35.0%
ATTACCAATGTCTGTGAGTA+TGG + Chr2:23875731-23875750 None:intergenic 35.0%
CAATTCCATAGTTTAGAGAG+AGG - Chr2:23872379-23872398 MsG0280007976.01.T01:intron 35.0%
CAATTGTAGCCTATAGAGAT+TGG - Chr2:23874875-23874894 MsG0280007976.01.T01:intron 35.0%
CACAGAAACTGACATTAGTT+AGG + Chr2:23873642-23873661 None:intergenic 35.0%
CATTATCTCCTTTGTCAGTA+AGG + Chr2:23875047-23875066 None:intergenic 35.0%
CATTTCCCAAATTGTCAACA+GGG - Chr2:23875452-23875471 MsG0280007976.01.T01:CDS 35.0%
CGATTAATAAATCCTCGACA+CGG + Chr2:23869820-23869839 None:intergenic 35.0%
CTAACTAATGTCAGTTTCTG+TGG - Chr2:23873640-23873659 MsG0280007976.01.T01:three_prime_UTR 35.0%
CTAAGAGTGACTTACTGATA+TGG - Chr2:23869431-23869450 MsG0280007976.01.T01:intron 35.0%
CTGATAAAACCATAAGGGTA+AGG - Chr2:23874005-23874024 MsG0280007976.01.T01:three_prime_UTR 35.0%
CTTATCATGAAGAAAGTCCT+AGG - Chr2:23871001-23871020 MsG0280007976.01.T01:three_prime_UTR 35.0%
GAATTGTGATCATAACACGT+AGG + Chr2:23872165-23872184 None:intergenic 35.0%
GACGACTTTCAAACATAACT+TGG - Chr2:23873127-23873146 MsG0280007976.01.T01:intron 35.0%
GAGAGTTTAATGAGTTCATC+AGG - Chr2:23869997-23870016 MsG0280007976.01.T01:three_prime_UTR 35.0%
GAGCTCGCAAATTTCAATTA+AGG + Chr2:23869167-23869186 None:intergenic 35.0%
GATACGAAACTTCAATTGGT+TGG - Chr2:23871771-23871790 MsG0280007976.01.T01:three_prime_UTR 35.0%
GCAACAACCAAGTAATGATT+TGG + Chr2:23868589-23868608 None:intergenic 35.0%
GCAACAATGACATTCATCAA+AGG - Chr2:23871089-23871108 MsG0280007976.01.T01:three_prime_UTR 35.0%
GCATGTATAATTATGCCTCA+GGG - Chr2:23872582-23872601 MsG0280007976.01.T01:three_prime_UTR 35.0%
GGTTACATAGTTACATACCT+TGG + Chr2:23870681-23870700 None:intergenic 35.0%
GTCCACTGATAAAACCATAA+GGG - Chr2:23874000-23874019 MsG0280007976.01.T01:three_prime_UTR 35.0%
TAAAGTTGCAATATGCCTCA+AGG + Chr2:23873311-23873330 None:intergenic 35.0%
TAACATGCACATAATAGGTG+TGG - Chr2:23874105-23874124 MsG0280007976.01.T01:three_prime_UTR 35.0%
TACTGACAAAGGAGATAATG+TGG - Chr2:23875047-23875066 MsG0280007976.01.T01:intron 35.0%
TAGTGATCTCAACTTCAAAG+AGG - Chr2:23870067-23870086 MsG0280007976.01.T01:intron 35.0%
TATAATTATGCCTCAGGGAA+AGG - Chr2:23872587-23872606 MsG0280007976.01.T01:three_prime_UTR 35.0%
TATCCAAACTGGATCTTACT+TGG - Chr2:23872919-23872938 MsG0280007976.01.T01:intron 35.0%
TCAAAGAGATGGAATTCTAG+TGG + Chr2:23869857-23869876 None:intergenic 35.0%
TCATCTTAGAACTTTCTTCG+CGG + Chr2:23869915-23869934 None:intergenic 35.0%
TCCAACACTTATGATACACT+TGG + Chr2:23872355-23872374 None:intergenic 35.0%
TCCAAGTGTATCATAAGTGT+TGG - Chr2:23872351-23872370 MsG0280007976.01.T01:intron 35.0%
TCTCAACTTCAAAGAGGAAA+TGG - Chr2:23870073-23870092 MsG0280007976.01.T01:intron 35.0%
TCTTACCACCATGATGATTA+AGG + Chr2:23873388-23873407 None:intergenic 35.0%
TGAAATGTGGTTATAAGTGG+TGG + Chr2:23874410-23874429 None:intergenic 35.0%
TGAAGCAATTGTTAAGGAGA+AGG - Chr2:23868808-23868827 MsG0280007976.01.T01:three_prime_UTR 35.0%
TGACATGTGTCCAATATTTC+CGG - Chr2:23871902-23871921 MsG0280007976.01.T01:intron 35.0%
TGCATGTATAATTATGCCTC+AGG - Chr2:23872581-23872600 MsG0280007976.01.T01:three_prime_UTR 35.0%
TGTTCATACACAAATCCTTG+AGG - Chr2:23873423-23873442 MsG0280007976.01.T01:intron 35.0%
TGTTGAAGGAACAACATTCA+AGG - Chr2:23874918-23874937 MsG0280007976.01.T01:intron 35.0%
TTACATACCTTGGTATGCAT+AGG + Chr2:23870671-23870690 None:intergenic 35.0%
TTGCTCCCTATATACTACAA+GGG - Chr2:23873471-23873490 MsG0280007976.01.T01:intron 35.0%
TTTGCTCCCTATATACTACA+AGG - Chr2:23873470-23873489 MsG0280007976.01.T01:intron 35.0%
! ACAACAAAGATTAGCCAGTA+TGG - Chr2:23875566-23875585 MsG0280007976.01.T01:CDS 35.0%
! CTGAACAAGCTTTTATCAGT+TGG + Chr2:23871578-23871597 None:intergenic 35.0%
! CTGCATGCATTTTATGAGAA+TGG + Chr2:23870529-23870548 None:intergenic 35.0%
! GTATCTGTTTTCTTTGAACC+AGG - Chr2:23873834-23873853 MsG0280007976.01.T01:three_prime_UTR 35.0%
! GTCTCTAAAAGGTGTAGAAA+TGG + Chr2:23870600-23870619 None:intergenic 35.0%
! GTCTGAAATGTGGTTATAAG+TGG + Chr2:23874413-23874432 None:intergenic 35.0%
! TCTTTGTTGTAATACTAGGC+TGG + Chr2:23875556-23875575 None:intergenic 35.0%
! TGAAAAGGTCTGGGATATTA+GGG - Chr2:23873885-23873904 MsG0280007976.01.T01:three_prime_UTR 35.0%
! TGATAATCTCCCCAACTTTT+TGG + Chr2:23875301-23875320 None:intergenic 35.0%
! TGGAATGGATGAAAGACTTT+TGG - Chr2:23872550-23872569 MsG0280007976.01.T01:three_prime_UTR 35.0%
! TTGAAAAGGTCTGGGATATT+AGG - Chr2:23873884-23873903 MsG0280007976.01.T01:three_prime_UTR 35.0%
! TTGCTTTGTTCTTACATGGA+TGG - Chr2:23874975-23874994 MsG0280007976.01.T01:intron 35.0%
! TTTGTTGTGTCTTAATCCTC+TGG - Chr2:23869034-23869053 MsG0280007976.01.T01:intron 35.0%
! TTTTCCGCGGACTTATATTT+AGG + Chr2:23875171-23875190 None:intergenic 35.0%
!! ATTTGGTTTGTGTCTGACAA+TGG + Chr2:23875623-23875642 None:intergenic 35.0%
!! CTGCCAATGACATTATTTTG+TGG - Chr2:23875349-23875368 MsG0280007976.01.T01:CDS 35.0%
!!! AAGACAGCCATTTTTCATGT+AGG - Chr2:23873057-23873076 MsG0280007976.01.T01:intron 35.0%
!!! TACCCTTATGGTTTTATCAG+TGG + Chr2:23874005-23874024 None:intergenic 35.0%
AAACATAACTTGGATGGCTG+AGG - Chr2:23873137-23873156 MsG0280007976.01.T01:intron 40.0%
AAATGTTCGTGCCAAATGCA+CGG - Chr2:23870623-23870642 MsG0280007976.01.T01:three_prime_UTR 40.0%
AACCGAGTTCAAAACTTGAC+CGG + Chr2:23869128-23869147 None:intergenic 40.0%
AAGCTGTGCAGATTCTTCTA+AGG - Chr2:23871603-23871622 MsG0280007976.01.T01:three_prime_UTR 40.0%
AAGTCCTAGGGAACAAAGAT+TGG - Chr2:23871014-23871033 MsG0280007976.01.T01:three_prime_UTR 40.0%
AATTTGCGAGCTCAATCACT+TGG - Chr2:23869174-23869193 MsG0280007976.01.T01:intron 40.0%
ACAATCACGATTTAAGTCCC+TGG + Chr2:23871178-23871197 None:intergenic 40.0%
ACTAAATGATACGTTTGGCC+AGG - Chr2:23871157-23871176 MsG0280007976.01.T01:intron 40.0%
AGAAGTTACACAGCTGGTAT+TGG + Chr2:23869469-23869488 None:intergenic 40.0%
AGGAAATCCTATGCATACCA+AGG - Chr2:23870661-23870680 MsG0280007976.01.T01:three_prime_UTR 40.0%
AGTGACTTACTGATATGGAC+AGG - Chr2:23869436-23869455 MsG0280007976.01.T01:intron 40.0%
ATAAGTCCACTGAGAACTGA+GGG + Chr2:23870459-23870478 None:intergenic 40.0%
ATCAAACCACCTACAAGAAG+TGG - Chr2:23874827-23874846 MsG0280007976.01.T01:intron 40.0%
ATCACATCTTGAGGATCCAT+TGG + Chr2:23869671-23869690 None:intergenic 40.0%
ATCATCAATGATGCTGCATG+AGG + Chr2:23870370-23870389 None:intergenic 40.0%
ATGGCTGTCTTACTTAGTAG+AGG + Chr2:23873048-23873067 None:intergenic 40.0%
CAATTGTTAAGGAGAAGGCA+AGG - Chr2:23868813-23868832 MsG0280007976.01.T01:three_prime_UTR 40.0%
CATCACCTTAATCATCATGG+TGG - Chr2:23873380-23873399 MsG0280007976.01.T01:intron 40.0%
CATGACAAAGCTTTCCATAC+TGG + Chr2:23875583-23875602 None:intergenic 40.0%
CCACTAGACAGTCTTTAAGT+GGG - Chr2:23873978-23873997 MsG0280007976.01.T01:three_prime_UTR 40.0%
CTAAATGATACGTTTGGCCA+GGG - Chr2:23871158-23871177 MsG0280007976.01.T01:intron 40.0%
CTAGCACCCATATGTATTTG+AGG + Chr2:23868291-23868310 None:intergenic 40.0%
CTAGTCTGTATGGGACATTA+AGG - Chr2:23873917-23873936 MsG0280007976.01.T01:three_prime_UTR 40.0%
CTCTTAGGTTCTGTTTGGAT+TGG - Chr2:23872718-23872737 MsG0280007976.01.T01:intron 40.0%
GAGAATCATATACAGCTGCA+TGG - Chr2:23871706-23871725 MsG0280007976.01.T01:three_prime_UTR 40.0%
GCAAGCAGAAATCATAGACT+CGG - Chr2:23869881-23869900 MsG0280007976.01.T01:three_prime_UTR 40.0%
GCAATATGCCTCAAGGATTT+GGG + Chr2:23873304-23873323 None:intergenic 40.0%
GCAGAGACATAAAAAAGCCT+TGG - Chr2:23871255-23871274 MsG0280007976.01.T01:intron 40.0%
GGTCCACTGATAAAACCATA+AGG - Chr2:23873999-23874018 MsG0280007976.01.T01:three_prime_UTR 40.0%
GTGACTTACTGATATGGACA+GGG - Chr2:23869437-23869456 MsG0280007976.01.T01:intron 40.0%
TACAAGGGACTGTTATTCAG+TGG - Chr2:23873486-23873505 MsG0280007976.01.T01:intron 40.0%
TACTGAGAAGGGACTAATCA+AGG - Chr2:23875372-23875391 MsG0280007976.01.T01:CDS 40.0%
TAGCCGATGATCTGAACAAA+TGG + Chr2:23870804-23870823 None:intergenic 40.0%
TATAAGTCCACTGAGAACTG+AGG + Chr2:23870460-23870479 None:intergenic 40.0%
TATCGACAAGTGTCAGACAT+TGG - Chr2:23875810-23875829 MsG0280007976.01.T01:five_prime_UTR 40.0%
TCACATCTTGAGGATCCATT+GGG + Chr2:23869670-23869689 None:intergenic 40.0%
TCAGTCCTCTCTCTAAACTA+TGG + Chr2:23872387-23872406 None:intergenic 40.0%
TCAGTTGTTAGGAAGCTTCA+AGG - Chr2:23868623-23868642 MsG0280007976.01.T01:three_prime_UTR 40.0%
TCGCATCACCTTAATCATCA+TGG - Chr2:23873377-23873396 MsG0280007976.01.T01:intron 40.0%
TCTCAGATGCAGAATTACTG+AGG + Chr2:23872492-23872511 None:intergenic 40.0%
TGAAGTAGAAGTTACACAGC+TGG + Chr2:23869475-23869494 None:intergenic 40.0%
TGATCCAATCTTTGTTCCCT+AGG + Chr2:23871021-23871040 None:intergenic 40.0%
TGATGAGAGAGATACTGAGA+AGG + Chr2:23868236-23868255 None:intergenic 40.0%
TGATTTAAATTGCCGTGTCG+AGG - Chr2:23869805-23869824 MsG0280007976.01.T01:three_prime_UTR 40.0%
TGCAATATGCCTCAAGGATT+TGG + Chr2:23873305-23873324 None:intergenic 40.0%
TGCATTCTGTTAACTACACG+AGG - Chr2:23871048-23871067 MsG0280007976.01.T01:three_prime_UTR 40.0%
TGCTTTATGGAGAGATTCCA+TGG - Chr2:23868870-23868889 MsG0280007976.01.T01:three_prime_UTR 40.0%
TGGTCAATCTGCTTGAATCA+AGG + Chr2:23869727-23869746 None:intergenic 40.0%
TGTAATACTAGGCTGGCAAA+AGG + Chr2:23875549-23875568 None:intergenic 40.0%
TGTTCTTGCATCACATCTTG+AGG + Chr2:23869680-23869699 None:intergenic 40.0%
TTCAGCTCTTAGGTTCTGTT+TGG - Chr2:23872713-23872732 MsG0280007976.01.T01:intron 40.0%
TTGATTCAAGCAGATTGACC+AGG - Chr2:23869726-23869745 MsG0280007976.01.T01:three_prime_UTR 40.0%
TTTATGGAGAGATTCCATGG+TGG - Chr2:23868873-23868892 MsG0280007976.01.T01:three_prime_UTR 40.0%
! AAAAGGTCTGGGATATTAGG+GGG - Chr2:23873887-23873906 MsG0280007976.01.T01:three_prime_UTR 40.0%
! AACAACATCTTTTGTGGACC+TGG + Chr2:23869747-23869766 None:intergenic 40.0%
! AGATGTTCAGGTCTGAAATG+TGG + Chr2:23874423-23874442 None:intergenic 40.0%
! ATCAGTTTGATGATAGGGAG+AGG + Chr2:23871754-23871773 None:intergenic 40.0%
! ATTTTTGTGGCAGTATGGGA+AGG - Chr2:23869640-23869659 MsG0280007976.01.T01:three_prime_UTR 40.0%
! GAAAAGGTCTGGGATATTAG+GGG - Chr2:23873886-23873905 MsG0280007976.01.T01:three_prime_UTR 40.0%
! GGTGATCAGGTTGTAATTGA+TGG + Chr2:23870894-23870913 None:intergenic 40.0%
! GTTTTGCTACCTTCATGTCT+TGG - Chr2:23874523-23874542 MsG0280007976.01.T01:three_prime_UTR 40.0%
! TCATCTTCATCAAGCATTGC+TGG + Chr2:23868550-23868569 None:intergenic 40.0%
! TGACTGGTCAATGATTGTTC+CGG - Chr2:23869106-23869125 MsG0280007976.01.T01:three_prime_UTR 40.0%
!! AGAGGAGTACCAAAAAGTTG+GGG - Chr2:23875289-23875308 MsG0280007976.01.T01:CDS 40.0%
!! GAGAGGAGTACCAAAAAGTT+GGG - Chr2:23875288-23875307 MsG0280007976.01.T01:CDS 40.0%
!! GGAGTGTTTGGTGTATTATC+AGG - Chr2:23868844-23868863 MsG0280007976.01.T01:three_prime_UTR 40.0%
!! GTCTTAATCCTCTGGTTCTA+TGG - Chr2:23869042-23869061 MsG0280007976.01.T01:intron 40.0%
!! TAATCCTCTGGTTCTATGGA+CGG - Chr2:23869046-23869065 MsG0280007976.01.T01:intron 40.0%
!! TGAGAGGAGTACCAAAAAGT+TGG - Chr2:23875287-23875306 MsG0280007976.01.T01:CDS 40.0%
!!! ATCGTGAGAAGTTTTAGACG+CGG + Chr2:23871307-23871326 None:intergenic 40.0%
!!! GAGAAGTGTTAGCCTTTTGT+TGG + Chr2:23868214-23868233 None:intergenic 40.0%
!!! TTCCGGTCAAGTTTTGAACT+CGG - Chr2:23869123-23869142 MsG0280007976.01.T01:three_prime_UTR 40.0%
AAACCACCTACAAGAAGTGG+AGG - Chr2:23874830-23874849 MsG0280007976.01.T01:intron 45.0%
AAGCACCTAAGAGACTGCTT+GGG - Chr2:23872765-23872784 MsG0280007976.01.T01:intron 45.0%
AAGGACAATACCTTTCCCTG+AGG + Chr2:23872600-23872619 None:intergenic 45.0%
AAGGTAAGCATGGGAATGCA+TGG - Chr2:23874642-23874661 MsG0280007976.01.T01:CDS 45.0%
AAGTTGGGGAGATTATCAGC+AGG - Chr2:23875303-23875322 MsG0280007976.01.T01:CDS 45.0%
ACCAGTCATCAATTACCTCC+CGG + Chr2:23869094-23869113 None:intergenic 45.0%
ACTGCCTTATAGCCATCTCA+TGG - Chr2:23872434-23872453 MsG0280007976.01.T01:three_prime_UTR 45.0%
AGCAATTTCTGCATCTGGAG+TGG - Chr2:23872530-23872549 MsG0280007976.01.T01:three_prime_UTR 45.0%
AGGAGATAATGTGGTAGCCA+TGG - Chr2:23875056-23875075 MsG0280007976.01.T01:intron 45.0%
AGGTGTAGAAATGGAGCAAG+AGG + Chr2:23870591-23870610 None:intergenic 45.0%
AGTTGGGGAGATTATCAGCA+GGG - Chr2:23875304-23875323 MsG0280007976.01.T01:CDS 45.0%
ATCCAGCCCTGTTGACAATT+TGG + Chr2:23875461-23875480 None:intergenic 45.0%
ATGTCTGTGAGTATGGTGTC+CGG + Chr2:23875724-23875743 None:intergenic 45.0%
CAAGCCATGAGATGGCTATA+AGG + Chr2:23872441-23872460 None:intergenic 45.0%
CATACACAAATCCTTGAGGC+AGG - Chr2:23873427-23873446 MsG0280007976.01.T01:intron 45.0%
CCCACTTAAAGACTGTCTAG+TGG + Chr2:23873981-23874000 None:intergenic 45.0%
CGTGTAGACAGCCTTAATCT+TGG - Chr2:23871383-23871402 MsG0280007976.01.T01:intron 45.0%
CTGCCAAGTAAGATCCAGTT+TGG + Chr2:23872925-23872944 None:intergenic 45.0%
CTGCTGATGAGCTAGAGATT+AGG + Chr2:23875104-23875123 None:intergenic 45.0%
CTGGTAATCGAGAGTTCAAC+CGG - Chr2:23869072-23869091 MsG0280007976.01.T01:three_prime_UTR 45.0%
CTTATAGCCATCTCATGGCT+TGG - Chr2:23872439-23872458 MsG0280007976.01.T01:three_prime_UTR 45.0%
GAAGTCTTCTACCACTTCCA+TGG + Chr2:23875076-23875095 None:intergenic 45.0%
GAATGCATGGCAATGGATCA+TGG - Chr2:23874655-23874674 MsG0280007976.01.T01:CDS 45.0%
GACACCATACTCACAGACAT+TGG - Chr2:23875724-23875743 MsG0280007976.01.T01:exon 45.0%
GATGGCTGAGGAGTTACATA+GGG - Chr2:23873149-23873168 MsG0280007976.01.T01:intron 45.0%
GCAATTCTCGGAAGGAGTAA+AGG - Chr2:23873095-23873114 MsG0280007976.01.T01:intron 45.0%
GCAGCTAAAATCTGGTGATC+AGG + Chr2:23870907-23870926 None:intergenic 45.0%
GCCACTAGACAGTCTTTAAG+TGG - Chr2:23873977-23873996 MsG0280007976.01.T01:three_prime_UTR 45.0%
GGAAGCTTCAAGGTGATGAA+TGG - Chr2:23868633-23868652 MsG0280007976.01.T01:three_prime_UTR 45.0%
GGTTGAACTCTCGATTACCA+GGG + Chr2:23869073-23869092 None:intergenic 45.0%
GTGGATAGTCCTTACCTTCA+AGG + Chr2:23874391-23874410 None:intergenic 45.0%
GTGTTGTGCAGCAACAACTA+AGG - Chr2:23872270-23872289 MsG0280007976.01.T01:intron 45.0%
TAAGCACCTAAGAGACTGCT+TGG - Chr2:23872764-23872783 MsG0280007976.01.T01:intron 45.0%
TAAGTCCACTGAGAACTGAG+GGG + Chr2:23870458-23870477 None:intergenic 45.0%
TAATGTGGTAGCCATGGAAG+TGG - Chr2:23875062-23875081 MsG0280007976.01.T01:intron 45.0%
TCACGATTACAGTCACGATG+TGG - Chr2:23871359-23871378 MsG0280007976.01.T01:intron 45.0%
TCCAGCCCTGTTGACAATTT+GGG + Chr2:23875460-23875479 None:intergenic 45.0%
TCGTTGAACCATCCGTTATC+AGG + Chr2:23874467-23874486 None:intergenic 45.0%
TCTCAAACAGATCTGGTGAG+AGG - Chr2:23875271-23875290 MsG0280007976.01.T01:CDS 45.0%
TGCTTGCGTGATCAAAGAGA+TGG + Chr2:23869868-23869887 None:intergenic 45.0%
TGGTAATCGAGAGTTCAACC+GGG - Chr2:23869073-23869092 MsG0280007976.01.T01:three_prime_UTR 45.0%
TGTTCACACCCAAATCCTTG+AGG - Chr2:23873293-23873312 MsG0280007976.01.T01:three_prime_UTR 45.0%
TTGACATCCAAGCCATGAGA+TGG + Chr2:23872449-23872468 None:intergenic 45.0%
TTGCTTCCTCCACTTCTTGT+AGG + Chr2:23874839-23874858 None:intergenic 45.0%
TTGTTAAGGAGAAGGCAAGG+AGG - Chr2:23868816-23868835 MsG0280007976.01.T01:three_prime_UTR 45.0%
! ACGGTTTGAGGCCAAGATTA+AGG + Chr2:23871397-23871416 None:intergenic 45.0%
! CTAATCTCTAGCTCATCAGC+AGG - Chr2:23875102-23875121 MsG0280007976.01.T01:intron 45.0%
! GAACTTTCTTCGCGGTTTTC+TGG + Chr2:23869907-23869926 None:intergenic 45.0%
! GGGTGCTAGTTTCAATCAAC+AGG - Chr2:23868302-23868321 MsG0280007976.01.T01:three_prime_UTR 45.0%
! GTCTCTGAGCATTTTGTCCA+TGG - Chr2:23872947-23872966 MsG0280007976.01.T01:intron 45.0%
! TGGTTTCTCCGAAGCTTGTT+TGG - Chr2:23868687-23868706 MsG0280007976.01.T01:three_prime_UTR 45.0%
! TTTCTGCATCTGGAGTGGAA+TGG - Chr2:23872535-23872554 MsG0280007976.01.T01:three_prime_UTR 45.0%
!! AAGGAGGTACAAGGAGTGTT+TGG - Chr2:23868832-23868851 MsG0280007976.01.T01:three_prime_UTR 45.0%
!! CATTTTGTCCATGGACTGAC+TGG - Chr2:23872956-23872975 MsG0280007976.01.T01:intron 45.0%
!!! AAACCTGTTTTGGTACGGTC+AGG - Chr2:23873688-23873707 MsG0280007976.01.T01:three_prime_UTR 45.0%
!!! AACCTGTTTTGGTACGGTCA+GGG - Chr2:23873689-23873708 MsG0280007976.01.T01:three_prime_UTR 45.0%
!!! AAAAATGTAATTTTAAAAAA+CGG + Chr2:23871416-23871435 None:intergenic 5.0%
AGCATGGGAATGCATGGCAA+TGG - Chr2:23874648-23874667 MsG0280007976.01.T01:CDS 50.0%
AGGTCGCACTCTAGATGTTC+AGG + Chr2:23874435-23874454 None:intergenic 50.0%
ATCTTGCTGGCACATACGCT+TGG - Chr2:23871679-23871698 MsG0280007976.01.T01:three_prime_UTR 50.0%
CATGGATACGGAGATACGTG+AGG + Chr2:23872200-23872219 None:intergenic 50.0%
CGGCTATTAATCTGCTGCAG+AGG - Chr2:23870818-23870837 MsG0280007976.01.T01:three_prime_UTR 50.0%
CGGTTGAACTCTCGATTACC+AGG + Chr2:23869074-23869093 None:intergenic 50.0%
CTGCAATAACTGCTCCACCA+TGG + Chr2:23868890-23868909 None:intergenic 50.0%
CTGCACAGACTCAAGCATAC+AGG - Chr2:23874693-23874712 MsG0280007976.01.T01:CDS 50.0%
CTTCCTCCACTTCTTGTAGG+TGG + Chr2:23874836-23874855 None:intergenic 50.0%
GCAATTGTGGCATGACACCA+AGG + Chr2:23871275-23871294 None:intergenic 50.0%
GCAGAATTACTGAGGCTGTC+TGG + Chr2:23872484-23872503 None:intergenic 50.0%
GCGGTCTGTAACAGCAATTG+TGG + Chr2:23871288-23871307 None:intergenic 50.0%
GGATGGCTGAGGAGTTACAT+AGG - Chr2:23873148-23873167 MsG0280007976.01.T01:intron 50.0%
GTATGGGAAGGTTCACCCAA+TGG - Chr2:23869652-23869671 MsG0280007976.01.T01:three_prime_UTR 50.0%
GTTCATCATTTGCGCGCACA+TGG - Chr2:23874182-23874201 MsG0280007976.01.T01:three_prime_UTR 50.0%
GTTCTCCCAAGCAGTCTCTT+AGG + Chr2:23872773-23872792 None:intergenic 50.0%
TAAAGTTGCGACCTGCCTCA+AGG + Chr2:23873441-23873460 None:intergenic 50.0%
TAATCGAGAGTTCAACCGGG+AGG - Chr2:23869076-23869095 MsG0280007976.01.T01:three_prime_UTR 50.0%
TCAAGTAGCAACGCAGACAC+CGG - Chr2:23875702-23875721 MsG0280007976.01.T01:CDS 50.0%
TCCCAAATTGTCAACAGGGC+TGG - Chr2:23875456-23875475 MsG0280007976.01.T01:CDS 50.0%
TGTGCGCGCAAATGATGAAC+TGG + Chr2:23874182-23874201 None:intergenic 50.0%
! AAACTCAAGCGCCGTGCATT+TGG + Chr2:23870637-23870656 None:intergenic 50.0%
! ACCGGGAGGTAATTGATGAC+TGG - Chr2:23869090-23869109 MsG0280007976.01.T01:three_prime_UTR 50.0%
! GCATGGCTTCTGAGAAAGAC+AGG - Chr2:23871723-23871742 MsG0280007976.01.T01:three_prime_UTR 50.0%
! GGCACTCAGCTAGTCTGTAT+GGG - Chr2:23873908-23873927 MsG0280007976.01.T01:three_prime_UTR 50.0%
! TTGTCCATGGACTGACTGGA+CGG - Chr2:23872960-23872979 MsG0280007976.01.T01:intron 50.0%
!!! ACCTGTTTTGGTACGGTCAG+GGG - Chr2:23873690-23873709 MsG0280007976.01.T01:three_prime_UTR 50.0%
!!! CACGGCGCTTGAGTTTTTTC+AGG - Chr2:23870641-23870660 MsG0280007976.01.T01:three_prime_UTR 50.0%
ACCCCTGACCGTACCAAAAC+AGG + Chr2:23873694-23873713 None:intergenic 55.0%
CAGTTCCCCTCAGTTCTCAG+TGG - Chr2:23870450-23870469 MsG0280007976.01.T01:three_prime_UTR 55.0%
CCTGAGTGGCTGCCTGATAA+CGG - Chr2:23874452-23874471 MsG0280007976.01.T01:three_prime_UTR 55.0%
CTCATCAGCAGGCAGCATTC+AGG - Chr2:23875113-23875132 MsG0280007976.01.T01:intron 55.0%
GGAGATTATCAGCAGGGAGC+AGG - Chr2:23875310-23875329 MsG0280007976.01.T01:CDS 55.0%
GGAGCAAGAGGAGTGAACTG+TGG + Chr2:23870579-23870598 None:intergenic 55.0%
! CATCTAGAGTGCGACCTGAG+TGG - Chr2:23874438-23874457 MsG0280007976.01.T01:three_prime_UTR 55.0%
! GGAGAAGGCAAGGAGGTACA+AGG - Chr2:23868823-23868842 MsG0280007976.01.T01:three_prime_UTR 55.0%
! GGGCACTCAGCTAGTCTGTA+TGG - Chr2:23873907-23873926 MsG0280007976.01.T01:three_prime_UTR 55.0%
!! AGTGGCTGCCTGATAACGGA+TGG - Chr2:23874456-23874475 MsG0280007976.01.T01:three_prime_UTR 55.0%
CCGTTATCAGGCAGCCACTC+AGG + Chr2:23874455-23874474 None:intergenic 60.0%
GCTGGCACATACGCTTGGAC+AGG - Chr2:23871684-23871703 MsG0280007976.01.T01:three_prime_UTR 60.0%
GGGTCCGTCCATAGAACCAG+AGG + Chr2:23869053-23869072 None:intergenic 60.0%
GGTTCCGTCCAGTCAGTCCA+TGG + Chr2:23872967-23872986 None:intergenic 60.0%
!! CTGGTTCTATGGACGGACCC+TGG - Chr2:23869053-23869072 MsG0280007976.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 23868133 23876055 23868133 ID=MsG0280007976.01;Name=MsG0280007976.01
Chr2 mRNA 23868133 23876055 23868133 ID=MsG0280007976.01.T01;Parent=MsG0280007976.01;Name=MsG0280007976.01.T01;_AED=0.08;_eAED=0.08;_QI=322|1|1|1|0|0.09|11|4269|201
Chr2 exon 23868133 23868715 23868133 ID=MsG0280007976.01.T01:exon:34666;Parent=MsG0280007976.01.T01
Chr2 exon 23868795 23868907 23868795 ID=MsG0280007976.01.T01:exon:34665;Parent=MsG0280007976.01.T01
Chr2 exon 23869054 23869179 23869054 ID=MsG0280007976.01.T01:exon:34664;Parent=MsG0280007976.01.T01
Chr2 exon 23869249 23869395 23869249 ID=MsG0280007976.01.T01:exon:34663;Parent=MsG0280007976.01.T01
Chr2 exon 23869474 23870066 23869474 ID=MsG0280007976.01.T01:exon:34662;Parent=MsG0280007976.01.T01
Chr2 exon 23870167 23871109 23870167 ID=MsG0280007976.01.T01:exon:34661;Parent=MsG0280007976.01.T01
Chr2 exon 23871580 23871870 23871580 ID=MsG0280007976.01.T01:exon:34660;Parent=MsG0280007976.01.T01
Chr2 exon 23872381 23872616 23872381 ID=MsG0280007976.01.T01:exon:34659;Parent=MsG0280007976.01.T01
Chr2 exon 23873234 23873375 23873234 ID=MsG0280007976.01.T01:exon:34658;Parent=MsG0280007976.01.T01
Chr2 exon 23873506 23874730 23873506 ID=MsG0280007976.01.T01:exon:34657;Parent=MsG0280007976.01.T01
Chr2 exon 23875258 23876055 23875258 ID=MsG0280007976.01.T01:exon:34656;Parent=MsG0280007976.01.T01
Chr2 five_prime_UTR 23875734 23876055 23875734 ID=MsG0280007976.01.T01:five_prime_utr;Parent=MsG0280007976.01.T01
Chr2 CDS 23875258 23875733 23875258 ID=MsG0280007976.01.T01:cds;Parent=MsG0280007976.01.T01
Chr2 CDS 23874601 23874730 23874601 ID=MsG0280007976.01.T01:cds;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23873506 23874600 23873506 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23873234 23873375 23873234 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23872381 23872616 23872381 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23871580 23871870 23871580 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23870167 23871109 23870167 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23869474 23870066 23869474 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23869249 23869395 23869249 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23869054 23869179 23869054 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23868795 23868907 23868795 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Chr2 three_prime_UTR 23868133 23868715 23868133 ID=MsG0280007976.01.T01:three_prime_utr;Parent=MsG0280007976.01.T01
Gene Sequence

>MsG0280007976.01.T01

ATGGCATTGACAACATTGAAATTGCAATACAATCACAACATCCAGAACAAAGATCTTTTAACCTTAAAAAGTCAGAAGAAATGCTTCAAGTTCCAGCAATGCTTGATGAAGATGAATTCACTGCTTCAATTCCAAATCATTACTTGGTTGTTGCTCTATTTTTATCTCTCAGTTGTTAGGAAGCTTCAAGGTGATGAATGGCAAGCTGCACTTCATTTTCTTCAAGCTGTTTTGGTTTCTCCGAAGCTTGTTTGGAATGAATTTGCACCTCAACTTTGTGAAAGTCTTTTCAAGAAGCATGAAAATAGAAGTTTGGAGTTTGTTAGTTCTTTGAATTCTGAGGAAGAAATCAATGAAGCAATTGTTAAGGAGAAGGCAAGGAGGTACAAGGAGTGTTTGGTGTATTATCAGGTCATGCTTTATGGAGAGATTCCATGGTGGAGCAGTTATTGCAGCAATAATTCAGCAAATTATATGGATGTATCCAATACCAGCTGTGTAACTTCTACTTCAGTTCAACATGAACAAAGATTGAAAACTTGCAATACAGTTAGTTTTTATTTAATTAATTCTATTACTAGCATCATTGATAATACATTTTATTGA

Protein sequence

>MsG0280007976.01.T01

MALTTLKLQYNHNIQNKDLLTLKSQKKCFKFQQCLMKMNSLLQFQIITWLLLYFYLSVVRKLQGDEWQAALHFLQAVLVSPKLVWNEFAPQLCESLFKKHENRSLEFVSSLNSEEEINEAIVKEKARRYKECLVYYQVMLYGEIPWWSSYCSNNSANYMDVSNTSCVTSTSVQHEQRLKTCNTVSFYLINSITSIIDNTFY*