AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037290.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037290.01.T01 MTR_4g121877 91.525 59 5 0 1 59 1 59 1.30e-32 109
MsG0780037290.01.T01 MTR_4g121870 98.148 54 1 0 1 54 137 190 1.36e-32 113
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037290.01.T01 AT3G06680 84.211 57 9 0 1 57 23 79 2.83e-28 99.4
MsG0780037290.01.T01 AT3G06680 84.211 57 9 0 1 57 1 57 6.18e-28 97.8
MsG0780037290.01.T01 AT3G06680 84.211 57 9 0 1 57 1 57 6.18e-28 97.8
MsG0780037290.01.T01 AT3G06700 84.211 57 9 0 1 57 1 57 9.89e-28 97.1
MsG0780037290.01.T01 AT3G06700 84.211 57 9 0 1 57 1 57 9.89e-28 97.1
MsG0780037290.01.T01 AT3G06700 84.211 57 9 0 1 57 1 57 9.89e-28 97.1

Find 43 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCACTGCATCTTCAGAATT+AGG 0.220908 7:-23199013 MsG0780037290.01.T01:CDS
GCAACCACATCTTCAGAATT+AGG 0.224507 7:-23204026 MsG0780037290.01.T01:intron
GAAGTGTGGCGGTGCCTCTT+TGG 0.285127 7:+23198904 None:intergenic
TTCTGTTCGACAGTACTTGA+TGG 0.332933 7:-23198616 MsG0780037290.01.T01:three_prime_UTR
ATCATAAACAGCAGAATTGA+TGG 0.369582 7:+23198488 None:intergenic
TTTATAATTCATGTTATGTA+TGG 0.371005 7:-23198649 MsG0780037290.01.T01:three_prime_UTR
ATGGCATCAAGAAGCCAAAA+AGG 0.372719 7:-23203866 MsG0780037290.01.T01:CDS
GTAAAGTGTCGATCTCTAAT+CGG 0.398848 7:-23198696 MsG0780037290.01.T01:three_prime_UTR
TCTTGTGAGCCTTGTAAGAC+TGG 0.428046 7:+23203889 None:intergenic
TCTGAAGATGCAGTGGCTCT+AGG 0.431928 7:+23199019 None:intergenic
AGAATTGATGGTCTAAATTC+AGG 0.442334 7:+23198500 None:intergenic
TATGCTTCCGTGCGTACCTC+TGG 0.442911 7:+23198750 None:intergenic
TGTGTTTCCTCGCATACCTC+TGG 0.457559 7:+23203702 None:intergenic
ACCGCCACACTTCCACCAAA+GGG 0.460737 7:-23198894 MsG0780037290.01.T01:CDS
TCTGAAGATGTGGTTGCACT+AGG 0.477534 7:+23204032 None:intergenic
ATCACCACACTTCCACCAAA+GGG 0.482418 7:-23203842 MsG0780037290.01.T01:CDS
CTGAAGATGCAGTGGCTCTA+GGG 0.484040 7:+23199020 None:intergenic
CTGAGTAATACATACCCCTT+TGG 0.488635 7:+23203827 None:intergenic
CGCTCACAACCAGTCTTACA+AGG 0.489194 7:-23203898 MsG0780037290.01.T01:CDS
CGCTCACAACCAGTCTTACA+AGG 0.508995 7:-23198950 MsG0780037290.01.T01:CDS
ATGATGAATACATACCCCTT+TGG 0.517971 7:+23198879 None:intergenic
TAAAGTGTCGATCTCTAATC+GGG 0.518145 7:-23198695 MsG0780037290.01.T01:three_prime_UTR
CACCGCCACACTTCCACCAA+AGG 0.519273 7:-23198895 MsG0780037290.01.T01:CDS
TCTTACAAGGCTCACAAGAA+TGG 0.521704 7:-23203885 MsG0780037290.01.T01:CDS
CTGAAGATGTGGTTGCACTA+GGG 0.535050 7:+23204033 None:intergenic
ATGAATACATACCCCTTTGG+TGG 0.547453 7:+23198882 None:intergenic
AGTAATACATACCCCTTTGG+TGG 0.557801 7:+23203830 None:intergenic
AAAACCTAATTCTGAAGATG+TGG 0.569103 7:+23204022 None:intergenic
CATCACCACACTTCCACCAA+AGG 0.580490 7:-23203843 MsG0780037290.01.T01:CDS
ACCTAATTCTGAAGATGCAG+TGG 0.589479 7:+23199012 None:intergenic
GGTTTGTTGAATTTCAGAGA+TGG 0.605195 7:-23198992 MsG0780037290.01.T01:CDS
ATGGCATCAAGAAGCCAAAG+AGG 0.617235 7:-23198918 MsG0780037290.01.T01:CDS
ATACCCCTTTGGTGGAAGTG+TGG 0.622392 7:+23198890 None:intergenic
CCCCTTTGGTGGAAGTGTGG+CGG 0.635065 7:+23198893 None:intergenic
TGATGCTGAAAGTGAGCTGT+GGG 0.640992 7:-23198463 MsG0780037290.01.T01:three_prime_UTR
TAAGGAACCAGAGGTATGCG+AGG 0.651232 7:-23203709 MsG0780037290.01.T01:CDS
TTGATGCTGAAAGTGAGCTG+TGG 0.659134 7:-23198464 MsG0780037290.01.T01:three_prime_UTR
CCGCCACACTTCCACCAAAG+GGG 0.674155 7:-23198893 MsG0780037290.01.T01:intron
CTTGTAAGACTGGTTGTGAG+CGG 0.674336 7:+23198951 None:intergenic
CTTGTAAGACTGGTTGTGAG+CGG 0.674336 7:+23203899 None:intergenic
TGAGGAACCAGAGGTACGCA+CGG 0.675026 7:-23198757 MsG0780037290.01.T01:CDS
ATACCCCTTTGGTGGAAGTG+TGG 0.685351 7:+23203838 None:intergenic
TCACCACACTTCCACCAAAG+GGG 0.701603 7:-23203841 MsG0780037290.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAATTAAATAAATAA+GGG + Chr7:23201238-23201257 None:intergenic 0.0%
!! TTTATTTAATTAAATAAATA+AGG + Chr7:23201260-23201241 None:intergenic 0.0%
!! AAAAATTACAAAATAAAACT+GGG - Chr7:23201677-23201696 MsG0780037290.01.T01:intron 10.0%
!!! AAAGAATTTTTTTTTTTTGA+GGG - Chr7:23203265-23203284 MsG0780037290.01.T01:intron 10.0%
!!! AAATGTATTTTTTTTTTTTG+TGG + Chr7:23202832-23202851 None:intergenic 10.0%
!!! TAAAGTATTTTTTTTTTGAA+AGG + Chr7:23202618-23202637 None:intergenic 10.0%
!!! TATTATATTTTGATAATTCA+AGG - Chr7:23203188-23203207 MsG0780037290.01.T01:intron 10.0%
!! AAAATTACAAAATAAAACTG+GGG - Chr7:23201678-23201697 MsG0780037290.01.T01:intron 15.0%
!! GAAAAATTACAAAATAAAAC+TGG - Chr7:23201676-23201695 MsG0780037290.01.T01:intron 15.0%
!! TAAAAATCAAGTTATTTGTT+TGG + Chr7:23201411-23201430 None:intergenic 15.0%
!! TAATAATATATATGAGCAAT+TGG + Chr7:23201648-23201667 None:intergenic 15.0%
!! TTTATAATTCATGTTATGTA+TGG - Chr7:23203849-23203868 MsG0780037290.01.T01:CDS 15.0%
!!! AAGGATGATATATTTTTTAT+AGG - Chr7:23201538-23201557 MsG0780037290.01.T01:intron 15.0%
!!! AATTGTTAGTGTTTTTTTTA+GGG - Chr7:23200195-23200214 MsG0780037290.01.T01:intron 15.0%
!!! ATAGGTTTTTTTTTTTTGAT+AGG - Chr7:23201556-23201575 MsG0780037290.01.T01:intron 15.0%
!!! ATATGTTTATTTTTTATAGG+TGG - Chr7:23202560-23202579 MsG0780037290.01.T01:intron 15.0%
!!! GAAAGAATTTTTTTTTTTTG+AGG - Chr7:23203264-23203283 MsG0780037290.01.T01:intron 15.0%
!!! TGATCTTTAAAAGTTTTAAA+CGG - Chr7:23203355-23203374 MsG0780037290.01.T01:intron 15.0%
!!! TTTAAAATCTTAAAAAATGC+TGG - Chr7:23200400-23200419 MsG0780037290.01.T01:intron 15.0%
!!! TTTACTTTTATAATTGTAGA+TGG - Chr7:23198754-23198773 MsG0780037290.01.T01:CDS 15.0%
!! AAATTACAAAATAAAACTGG+GGG - Chr7:23201679-23201698 MsG0780037290.01.T01:intron 20.0%
!! ATAAAGCAATTAATTGAACA+TGG - Chr7:23203324-23203343 MsG0780037290.01.T01:intron 20.0%
!! CAATATTAACAAGATTTACA+AGG - Chr7:23203042-23203061 MsG0780037290.01.T01:intron 20.0%
!! GACATGTATTGTTATATATA+GGG + Chr7:23202732-23202751 None:intergenic 20.0%
!! TAGTTCAAAGTATATTTCAT+AGG - Chr7:23199523-23199542 MsG0780037290.01.T01:intron 20.0%
!! TGACATGTATTGTTATATAT+AGG + Chr7:23202733-23202752 None:intergenic 20.0%
!! TGTATGTATATATATCTGTT+GGG + Chr7:23203436-23203455 None:intergenic 20.0%
!! TGTGTAATAGTTTATGTAAA+AGG - Chr7:23201306-23201325 MsG0780037290.01.T01:intron 20.0%
!! TTAATTGGAATCATTCAAAT+TGG + Chr7:23199561-23199580 None:intergenic 20.0%
!! TTGAAAAATGAAGAAATTGA+AGG + Chr7:23198506-23198525 None:intergenic 20.0%
!!! ATGATTTTGATACTACTATA+AGG - Chr7:23199498-23199517 MsG0780037290.01.T01:intron 20.0%
!!! ATTGTTAGTGTTTTTTTTAG+GGG - Chr7:23200196-23200215 MsG0780037290.01.T01:intron 20.0%
!!! ATTTCTTCAAGTCTTTTAAT+TGG + Chr7:23199576-23199595 None:intergenic 20.0%
!!! ATTTTTTAATGTGAATAAGC+GGG - Chr7:23202683-23202702 MsG0780037290.01.T01:intron 20.0%
!!! CAATTGTTAGTGTTTTTTTT+AGG - Chr7:23200194-23200213 MsG0780037290.01.T01:intron 20.0%
!!! CATTTTTTAATGTGAATAAG+CGG - Chr7:23202682-23202701 MsG0780037290.01.T01:intron 20.0%
!!! GTTTAAAACTTTTAAAGATC+AGG + Chr7:23203356-23203375 None:intergenic 20.0%
!!! GTTTAACTTTTCTCATTTAA+CGG + Chr7:23201473-23201492 None:intergenic 20.0%
!!! TGTATTTTTTTTTTTTGTGG+TGG + Chr7:23202829-23202848 None:intergenic 20.0%
!!! TTAATTGCTAGATCTTTTTA+GGG + Chr7:23201770-23201789 None:intergenic 20.0%
!!! TTCTTGCTTTAAAATATTGA+TGG + Chr7:23200330-23200349 None:intergenic 20.0%
!!! TTTTTAATTATTGCAATCAC+TGG - Chr7:23199033-23199052 MsG0780037290.01.T01:CDS 20.0%
! AAAAATGAAGAAATTGAAGG+AGG + Chr7:23198503-23198522 None:intergenic 25.0%
! AAAGATAATAATCCACAAAG+TGG - Chr7:23201738-23201757 MsG0780037290.01.T01:intron 25.0%
! AATTACAAAATAAAACTGGG+GGG - Chr7:23201680-23201699 MsG0780037290.01.T01:intron 25.0%
! AATTGGCATTAGATTAGAAT+AGG + Chr7:23201631-23201650 None:intergenic 25.0%
! ACAGATATATATACATACAC+AGG - Chr7:23203437-23203456 MsG0780037290.01.T01:intron 25.0%
! AGAATAGTGTCCAAATAATT+TGG - Chr7:23201602-23201621 MsG0780037290.01.T01:intron 25.0%
! AGAATGCTTAATGATGTATA+TGG - Chr7:23200935-23200954 MsG0780037290.01.T01:intron 25.0%
! AGAGTTAAGGAAAGATATAA+GGG + Chr7:23198537-23198556 None:intergenic 25.0%
! ATTGGCATTAGATTAGAATA+GGG + Chr7:23201630-23201649 None:intergenic 25.0%
! CATGTATTGAATTTCAGAAA+TGG - Chr7:23198558-23198577 MsG0780037290.01.T01:three_prime_UTR 25.0%
! GATGATATGCGTTTATTATA+AGG + Chr7:23199360-23199379 None:intergenic 25.0%
! GCAACATATACAAAAATACA+AGG + Chr7:23199312-23199331 None:intergenic 25.0%
! GCAATCTTAAATCTTTCTAA+TGG - Chr7:23200880-23200899 MsG0780037290.01.T01:intron 25.0%
! GTATGTATATATATCTGTTG+GGG + Chr7:23203435-23203454 None:intergenic 25.0%
! GTGTATGTATATATATCTGT+TGG + Chr7:23203437-23203456 None:intergenic 25.0%
! TCTTCGAAAACATTAAACAT+GGG + Chr7:23201024-23201043 None:intergenic 25.0%
! TTCTTCGAAAACATTAAACA+TGG + Chr7:23201025-23201044 None:intergenic 25.0%
! TTTACAAAAATGTGAGTTTC+TGG - Chr7:23200020-23200039 MsG0780037290.01.T01:intron 25.0%
! TTTCCGTATAAAGAAAACAA+AGG - Chr7:23201519-23201538 MsG0780037290.01.T01:intron 25.0%
!! CAACTATTGACTAACTAATT+GGG + Chr7:23199439-23199458 None:intergenic 25.0%
!! CTTAATTGCTAGATCTTTTT+AGG + Chr7:23201771-23201790 None:intergenic 25.0%
!!! ATTAATCTCTCAACTAGTTT+TGG + Chr7:23203115-23203134 None:intergenic 25.0%
!!! CATCCTTTGTTTTCTTTATA+CGG + Chr7:23201525-23201544 None:intergenic 25.0%
!!! CATTCCATATCATTTTTTAG+AGG + Chr7:23203071-23203090 None:intergenic 25.0%
!!! TACTTCGAATATTGTTGTTT+TGG - Chr7:23200779-23200798 MsG0780037290.01.T01:intron 25.0%
!!! TGTGGGATCATATTTTTATT+TGG - Chr7:23204052-23204071 MsG0780037290.01.T01:five_prime_UTR 25.0%
!!! TTTTTATGTCATTTTGCTCT+TGG + Chr7:23201582-23201601 None:intergenic 25.0%
!!! TTTTTTAATGTGAATAAGCG+GGG - Chr7:23202684-23202703 MsG0780037290.01.T01:intron 25.0%
AAACATCTCAAATTGTGCAT+TGG + Chr7:23202022-23202041 None:intergenic 30.0%
AATCATTCAAATTGGCATCT+CGG + Chr7:23199553-23199572 None:intergenic 30.0%
AATCCATTACAAGTGTTTCA+GGG - Chr7:23200486-23200505 MsG0780037290.01.T01:intron 30.0%
AGGAAACACAACAAGAAAAA+TGG - Chr7:23198809-23198828 MsG0780037290.01.T01:intron 30.0%
AGTCAAAAAATGCTTGAAAG+TGG - Chr7:23201914-23201933 MsG0780037290.01.T01:intron 30.0%
ATATGTTGCACTATTAACAC+TGG - Chr7:23199323-23199342 MsG0780037290.01.T01:intron 30.0%
ATCATAAACAGCAGAATTGA+TGG + Chr7:23204013-23204032 None:intergenic 30.0%
ATGACTAATACATAACACCA+AGG - Chr7:23203088-23203107 MsG0780037290.01.T01:intron 30.0%
ATTCAATACATGCAGAGTTA+AGG + Chr7:23198550-23198569 None:intergenic 30.0%
ATTGTTATATATAGGGATCG+AGG + Chr7:23202725-23202744 None:intergenic 30.0%
CAGAGTTAAGGAAAGATATA+AGG + Chr7:23198538-23198557 None:intergenic 30.0%
CATATACAAAAATACAAGGC+AGG + Chr7:23199308-23199327 None:intergenic 30.0%
GACATTGCATAAAATATGCA+AGG - Chr7:23202784-23202803 MsG0780037290.01.T01:intron 30.0%
TATACGGAAAATTTGTGTCT+TGG + Chr7:23201509-23201528 None:intergenic 30.0%
TATTATCCCTCAATTTGGAT+TGG + Chr7:23201137-23201156 None:intergenic 30.0%
TGAGTTTAACTCAGTTAGTA+GGG - Chr7:23202762-23202781 MsG0780037290.01.T01:intron 30.0%
TGTAGAAACAGAGTAATAGT+TGG + Chr7:23200076-23200095 None:intergenic 30.0%
TGTTCTATTATCCCTCAATT+TGG + Chr7:23201142-23201161 None:intergenic 30.0%
TTGTGATTGATTACTGTAGA+TGG - Chr7:23203706-23203725 MsG0780037290.01.T01:CDS 30.0%
! AAAACCTAATTCTGAAGATG+TGG + Chr7:23198479-23198498 None:intergenic 30.0%
! AGAATTGATGGTCTAAATTC+AGG + Chr7:23204001-23204020 None:intergenic 30.0%
! AGATGGATCCAAAGTTTTTA+AGG - Chr7:23198771-23198790 MsG0780037290.01.T01:CDS 30.0%
! GAATAGGGTACCAAATTATT+TGG + Chr7:23201615-23201634 None:intergenic 30.0%
! GACTCCTCTAAAAAATGATA+TGG - Chr7:23203064-23203083 MsG0780037290.01.T01:intron 30.0%
! GCAACTATTGACTAACTAAT+TGG + Chr7:23199440-23199459 None:intergenic 30.0%
! TCTAATGGAAGACATTTTGT+GGG - Chr7:23200895-23200914 MsG0780037290.01.T01:intron 30.0%
! TTCTAATGGAAGACATTTTG+TGG - Chr7:23200894-23200913 MsG0780037290.01.T01:intron 30.0%
!! TTTTTAGGGGATCAATTGTT+AGG - Chr7:23200209-23200228 MsG0780037290.01.T01:intron 30.0%
!!! AAGCATTTTTTGACTGACAT+GGG + Chr7:23201909-23201928 None:intergenic 30.0%
!!! TATCTTTTGTTTTGCCGTTA+TGG + Chr7:23201725-23201744 None:intergenic 30.0%
AAAAAAACAGCGAGCATACA+TGG - Chr7:23202126-23202145 MsG0780037290.01.T01:intron 35.0%
AAATGTGAATTCTACCCACT+AGG + Chr7:23202667-23202686 None:intergenic 35.0%
AAGATCTAGCAATTAAGCAC+AGG - Chr7:23201774-23201793 MsG0780037290.01.T01:intron 35.0%
AAGCAAAGTGTGATATTTGC+AGG + Chr7:23202906-23202925 None:intergenic 35.0%
AATACATTTCATTGCCAACG+AGG - Chr7:23202843-23202862 MsG0780037290.01.T01:intron 35.0%
ACATTAAACATGGGAGGAAA+TGG + Chr7:23201015-23201034 None:intergenic 35.0%
ACTTCTTCGGTGGAATTAAA+AGG - Chr7:23199843-23199862 MsG0780037290.01.T01:intron 35.0%
AGAAACAGAGTAATAGTTGG+AGG + Chr7:23200073-23200092 None:intergenic 35.0%
AGATCTAGCAATTAAGCACA+GGG - Chr7:23201775-23201794 MsG0780037290.01.T01:intron 35.0%
AGCAAAGTGTGATATTTGCA+GGG + Chr7:23202905-23202924 None:intergenic 35.0%
AGTGTATACACACAAGTTCT+TGG - Chr7:23199673-23199692 MsG0780037290.01.T01:intron 35.0%
ATATGCATAACACTTTCCCT+AGG + Chr7:23199207-23199226 None:intergenic 35.0%
ATGACGTAGAAAACAAGCAA+TGG + Chr7:23200835-23200854 None:intergenic 35.0%
ATGAGATAGGAGAACTTCAA+TGG - Chr7:23201161-23201180 MsG0780037290.01.T01:intron 35.0%
ATGATGAATACATACCCCTT+TGG + Chr7:23203622-23203641 None:intergenic 35.0%
CAAAAAATGCTTGAAAGTGG+AGG - Chr7:23201917-23201936 MsG0780037290.01.T01:intron 35.0%
CAATCCATTACAAGTGTTTC+AGG - Chr7:23200485-23200504 MsG0780037290.01.T01:intron 35.0%
CATAAAATATGCAAGGTTCG+AGG - Chr7:23202791-23202810 MsG0780037290.01.T01:intron 35.0%
CATTAAACATGGGAGGAAAT+GGG + Chr7:23201014-23201033 None:intergenic 35.0%
CTCTTAATCTGCTGTTAAGT+TGG + Chr7:23201985-23202004 None:intergenic 35.0%
GGGATAATAGAACATGAGAT+AGG - Chr7:23201148-23201167 MsG0780037290.01.T01:intron 35.0%
GGTTGGAAATATAGGAGAAA+TGG - Chr7:23199139-23199158 MsG0780037290.01.T01:intron 35.0%
GTATATATATCTGTTGGGGA+CGG + Chr7:23203431-23203450 None:intergenic 35.0%
GTGAGTTTAACTCAGTTAGT+AGG - Chr7:23202761-23202780 MsG0780037290.01.T01:intron 35.0%
GTGTATACACACAAGTTCTT+GGG - Chr7:23199674-23199693 MsG0780037290.01.T01:intron 35.0%
GTTCTGCGGTTTCAAAATTT+GGG + Chr7:23202390-23202409 None:intergenic 35.0%
TATATATATCTGTTGGGGAC+GGG + Chr7:23203430-23203449 None:intergenic 35.0%
TCATTGTTAGCACAGTTAAC+AGG - Chr7:23199242-23199261 MsG0780037290.01.T01:intron 35.0%
TCGAAAACATTAAACATGGG+AGG + Chr7:23201021-23201040 None:intergenic 35.0%
TCGCTATAGAACTTACTACA+CGG + Chr7:23199643-23199662 None:intergenic 35.0%
TGAAAGTCTACTACAAACGT+CGG + Chr7:23199279-23199298 None:intergenic 35.0%
TGACGTAGAAAACAAGCAAT+GGG + Chr7:23200834-23200853 None:intergenic 35.0%
TGTGGGTAGTTTATGATGTT+TGG - Chr7:23200912-23200931 MsG0780037290.01.T01:intron 35.0%
TTACCCTGAAACACTTGTAA+TGG + Chr7:23200492-23200511 None:intergenic 35.0%
TTACTTTGATATACGCGATC+TGG + Chr7:23202337-23202356 None:intergenic 35.0%
TTTGTCAACTATAGCCTAGT+GGG - Chr7:23202650-23202669 MsG0780037290.01.T01:intron 35.0%
! AAACATTGAACCAGTTTTCC+CGG + Chr7:23200613-23200632 None:intergenic 35.0%
! AACTTCCTTCTTTGAGAACA+TGG + Chr7:23201073-23201092 None:intergenic 35.0%
! AAGAATGCTACAAGGCATTT+GGG + Chr7:23200448-23200467 None:intergenic 35.0%
! ACTTCCTTCTTTGAGAACAT+GGG + Chr7:23201072-23201091 None:intergenic 35.0%
! AGATGGATCCAAAGTTTTTG+AGG - Chr7:23203723-23203742 MsG0780037290.01.T01:CDS 35.0%
! AGTTTCAATTTTCCCAAGCA+GGG + Chr7:23199948-23199967 None:intergenic 35.0%
! ATTTGAGATGTTTGCAAGCA+CGG - Chr7:23202029-23202048 MsG0780037290.01.T01:intron 35.0%
! CGGAAGCATAACAAGAAAAA+TGG - Chr7:23203761-23203780 MsG0780037290.01.T01:intron 35.0%
! CTCTGGTTCCTTAAAAACTT+TGG + Chr7:23198782-23198801 None:intergenic 35.0%
! GCAGTACTGTTAGCATTTTT+GGG - Chr7:23203926-23203945 MsG0780037290.01.T01:exon 35.0%
! TGCAGTACTGTTAGCATTTT+TGG - Chr7:23203925-23203944 MsG0780037290.01.T01:exon 35.0%
! TGTGGTAATGCATGTTTACA+TGG - Chr7:23199732-23199751 MsG0780037290.01.T01:intron 35.0%
! TTTTGTCAACTATAGCCTAG+TGG - Chr7:23202649-23202668 MsG0780037290.01.T01:intron 35.0%
!! CAAAGTTTTTAAGGAACCAG+AGG - Chr7:23198780-23198799 MsG0780037290.01.T01:intron 35.0%
!! GGTTTGTTGAATTTCAGAGA+TGG - Chr7:23203506-23203525 MsG0780037290.01.T01:intron 35.0%
!! GTAAAGTGTCGATCTCTAAT+CGG - Chr7:23203802-23203821 MsG0780037290.01.T01:intron 35.0%
!! TAAAGTGTCGATCTCTAATC+GGG - Chr7:23203803-23203822 MsG0780037290.01.T01:intron 35.0%
!! TTTCTCTGAAACTCCAAAAC+AGG - Chr7:23200631-23200650 MsG0780037290.01.T01:intron 35.0%
!! TTTTCTAGCAAGATCTGGAT+TGG + Chr7:23202367-23202386 None:intergenic 35.0%
!!! CAAGCATTTTTTGACTGACA+TGG + Chr7:23201910-23201929 None:intergenic 35.0%
!!! CTTCTTGATGCCATTTTTGT+GGG + Chr7:23203574-23203593 None:intergenic 35.0%
!!! GCGAGGGTTTATTTTTTACA+AGG - Chr7:23202530-23202549 MsG0780037290.01.T01:intron 35.0%
!!! TGTTGTTTTGGTCTTGTGTT+TGG - Chr7:23200791-23200810 MsG0780037290.01.T01:intron 35.0%
AAAAACAAGTTCCCCTGCTT+GGG - Chr7:23199933-23199952 MsG0780037290.01.T01:intron 40.0%
AACGGAAGATTTGGATTCGA+CGG - Chr7:23202495-23202514 MsG0780037290.01.T01:intron 40.0%
AAGTTCTATAGCGATATCCC+AGG - Chr7:23199649-23199668 MsG0780037290.01.T01:intron 40.0%
ACTCACGCTTAACACTTCTT+CGG - Chr7:23199830-23199849 MsG0780037290.01.T01:intron 40.0%
ACTTGTGTGTATACACTTCC+TGG + Chr7:23199670-23199689 None:intergenic 40.0%
AGGGTTGAAAACGGAAGATT+TGG - Chr7:23202486-23202505 MsG0780037290.01.T01:intron 40.0%
AGTAATACATACCCCTTTGG+TGG + Chr7:23198671-23198690 None:intergenic 40.0%
AGTCCATATTCTACCTTCCT+AGG - Chr7:23199187-23199206 MsG0780037290.01.T01:intron 40.0%
ATAATCCTTCGTTGCCTTTC+TGG + Chr7:23202291-23202310 None:intergenic 40.0%
ATATCCTCATCCTCCTATCT+TGG + Chr7:23199710-23199729 None:intergenic 40.0%
ATGAATACATACCCCTTTGG+TGG + Chr7:23203619-23203638 None:intergenic 40.0%
ATGCCATGAAGAATGCTACA+AGG + Chr7:23200456-23200475 None:intergenic 40.0%
ATGCCTTGTAGCATTCTTCA+TGG - Chr7:23200450-23200469 MsG0780037290.01.T01:intron 40.0%
ATGGCATCAAGAAGCCAAAA+AGG - Chr7:23198632-23198651 MsG0780037290.01.T01:three_prime_UTR 40.0%
CAAAAGGACCACTAATAGAG+GGG + Chr7:23199795-23199814 None:intergenic 40.0%
CAAGCAATGGGAAAATACGT+TGG + Chr7:23200822-23200841 None:intergenic 40.0%
CACCATCTTTACTGTGTCAT+GGG - Chr7:23199900-23199919 MsG0780037290.01.T01:intron 40.0%
CTAACTGAGTTAAACTCACG+AGG + Chr7:23202760-23202779 None:intergenic 40.0%
CTGAGTAATACATACCCCTT+TGG + Chr7:23198674-23198693 None:intergenic 40.0%
CTTGTGTGTATACACTTCCT+GGG + Chr7:23199669-23199688 None:intergenic 40.0%
GAAGGTAGAATATGGACTTG+TGG + Chr7:23199185-23199204 None:intergenic 40.0%
GACTTGCCAATCCAAATTGA+GGG - Chr7:23201128-23201147 MsG0780037290.01.T01:intron 40.0%
GCAAAAGGACCACTAATAGA+GGG + Chr7:23199796-23199815 None:intergenic 40.0%
GCAACCACATCTTCAGAATT+AGG - Chr7:23198472-23198491 MsG0780037290.01.T01:three_prime_UTR 40.0%
GGTTCTGCGGTTTCAAAATT+TGG + Chr7:23202391-23202410 None:intergenic 40.0%
GTCCATATTCTACCTTCCTA+GGG - Chr7:23199188-23199207 MsG0780037290.01.T01:intron 40.0%
GTGTTTCAGGGTAATAAACC+TGG - Chr7:23200498-23200517 MsG0780037290.01.T01:intron 40.0%
GTTGCACTATTAACACTGGT+TGG - Chr7:23199327-23199346 MsG0780037290.01.T01:intron 40.0%
TAATCCTTCGTTGCCTTTCT+GGG + Chr7:23202290-23202309 None:intergenic 40.0%
TATCCTCATCCTCCTATCTT+GGG + Chr7:23199709-23199728 None:intergenic 40.0%
TCACCATCTTTACTGTGTCA+TGG - Chr7:23199899-23199918 MsG0780037290.01.T01:intron 40.0%
TCTCCTAAACATAACCTCGT+TGG + Chr7:23202860-23202879 None:intergenic 40.0%
TCTTACAAGGCCCACAAAAA+TGG - Chr7:23203561-23203580 MsG0780037290.01.T01:intron 40.0%
TCTTACAAGGCTCACAAGAA+TGG - Chr7:23198613-23198632 MsG0780037290.01.T01:three_prime_UTR 40.0%
TGAGAACATGGGAAGGAAAA+TGG + Chr7:23201061-23201080 None:intergenic 40.0%
TTAAGCACAGGGCTAAAGTA+TGG - Chr7:23201786-23201805 MsG0780037290.01.T01:intron 40.0%
TTAGGGTTGAATCCACTTTG+TGG + Chr7:23201753-23201772 None:intergenic 40.0%
TTCCCTAGGAAGGTAGAATA+TGG + Chr7:23199193-23199212 None:intergenic 40.0%
TTCTGTTCGACAGTACTTGA+TGG - Chr7:23203882-23203901 MsG0780037290.01.T01:CDS 40.0%
TTGCCAACGAGGTTATGTTT+AGG - Chr7:23202854-23202873 MsG0780037290.01.T01:intron 40.0%
TTTGTGGGGGTTGGAAATAT+AGG - Chr7:23199131-23199150 MsG0780037290.01.T01:intron 40.0%
! ACCTAATTCTGAAGATGCAG+TGG + Chr7:23203489-23203508 None:intergenic 40.0%
! AGGAGGATGAGGATATTTTG+TGG - Chr7:23199714-23199733 MsG0780037290.01.T01:intron 40.0%
! CACTTTAGTTCGTACTTCGT+GGG + Chr7:23203004-23203023 None:intergenic 40.0%
! CAGTTTCAATTTTCCCAAGC+AGG + Chr7:23199949-23199968 None:intergenic 40.0%
! CTCTGGTTCCTCAAAAACTT+TGG + Chr7:23203734-23203753 None:intergenic 40.0%
! CTTAGAAAACAGAGCACTAG+AGG - Chr7:23200710-23200729 MsG0780037290.01.T01:intron 40.0%
! GAAGAATGCTACAAGGCATT+TGG + Chr7:23200449-23200468 None:intergenic 40.0%
! GTTCTTTGTTTGCGAGTTGA+GGG - Chr7:23199102-23199121 MsG0780037290.01.T01:intron 40.0%
! GTTTCAATTTTCCCAAGCAG+GGG + Chr7:23199947-23199966 None:intergenic 40.0%
! TCACTTTAGTTCGTACTTCG+TGG + Chr7:23203005-23203024 None:intergenic 40.0%
! TGACTTGCCAATCCAAATTG+AGG - Chr7:23201127-23201146 MsG0780037290.01.T01:intron 40.0%
! TGTTCTTTGTTTGCGAGTTG+AGG - Chr7:23199101-23199120 MsG0780037290.01.T01:intron 40.0%
! TTCTTTGTTTGCGAGTTGAG+GGG - Chr7:23199103-23199122 MsG0780037290.01.T01:intron 40.0%
! TTGACTGACATGGGACATTT+TGG + Chr7:23201900-23201919 None:intergenic 40.0%
!! AAGAAGTGTTAAGCGTGAGT+AGG + Chr7:23199830-23199849 None:intergenic 40.0%
!! CAAAGTTTTTGAGGAACCAG+AGG - Chr7:23203732-23203751 MsG0780037290.01.T01:intron 40.0%
!! GAGTAAACTTGTTAGCGTGT+TGG + Chr7:23202090-23202109 None:intergenic 40.0%
!! TAAACTTGTTAGCGTGTTGG+CGG + Chr7:23202087-23202106 None:intergenic 40.0%
!! TTGGGTTTTCTAGCAAGATC+TGG + Chr7:23202372-23202391 None:intergenic 40.0%
!! TTGTTTTGCCGTTATGGACT+GGG + Chr7:23201719-23201738 None:intergenic 40.0%
!!! GCTTCTTGATGCCATTTTTG+TGG + Chr7:23203575-23203594 None:intergenic 40.0%
!!! GTTTTTTTGCAGTGGGTTGT+TGG + Chr7:23202114-23202133 None:intergenic 40.0%
!!! TCTCAACTAGTTTTGGTCCT+TGG + Chr7:23203108-23203127 None:intergenic 40.0%
!!! TTTGTTTTGCCGTTATGGAC+TGG + Chr7:23201720-23201739 None:intergenic 40.0%
AAAACCAGAACCGGGAAAAC+TGG - Chr7:23200600-23200619 MsG0780037290.01.T01:intron 45.0%
AAACCTGACCCAGTCCATAA+CGG - Chr7:23201708-23201727 MsG0780037290.01.T01:intron 45.0%
AAGATTTGGATTCGACGGGA+TGG - Chr7:23202500-23202519 MsG0780037290.01.T01:intron 45.0%
ACCACTAATAGAGGGGTTGT+GGG + Chr7:23199788-23199807 None:intergenic 45.0%
ACGGAAGATTTGGATTCGAC+GGG - Chr7:23202496-23202515 MsG0780037290.01.T01:intron 45.0%
AGCCCATGACACAGTAAAGA+TGG + Chr7:23199905-23199924 None:intergenic 45.0%
AGTCCAACCGATTGAACTTG+CGG + Chr7:23200531-23200550 None:intergenic 45.0%
ATACCCAAGATAGGAGGATG+AGG - Chr7:23199703-23199722 MsG0780037290.01.T01:intron 45.0%
ATAGGAGAACTTCAATGGCG+TGG - Chr7:23201166-23201185 MsG0780037290.01.T01:intron 45.0%
ATCACCACACTTCCACCAAA+GGG - Chr7:23198656-23198675 MsG0780037290.01.T01:three_prime_UTR 45.0%
ATCGATGTGTAGTCATCGTC+TGG + Chr7:23202226-23202245 None:intergenic 45.0%
ATGCGACGAGGAAAATAGTG+TGG + Chr7:23199763-23199782 None:intergenic 45.0%
ATGGCATCAAGAAGCCAAAG+AGG - Chr7:23203580-23203599 MsG0780037290.01.T01:intron 45.0%
ATGTGAGCCAACATTTCGTG+AGG + Chr7:23200360-23200379 None:intergenic 45.0%
ATGTGTAGTCATCGTCTGGT+TGG + Chr7:23202222-23202241 None:intergenic 45.0%
ATGTTTGCAAGCACGGAACT+TGG - Chr7:23202036-23202055 MsG0780037290.01.T01:intron 45.0%
ATTGCACCAAAACCAGAACC+GGG - Chr7:23200592-23200611 MsG0780037290.01.T01:intron 45.0%
CAAGTTCAATCGGTTGGACT+GGG - Chr7:23200531-23200550 MsG0780037290.01.T01:intron 45.0%
CAATCCAGTTGAGTGTGCAT+TGG + Chr7:23200576-23200595 None:intergenic 45.0%
CACTCTATACCCAAGATAGG+AGG - Chr7:23199697-23199716 MsG0780037290.01.T01:intron 45.0%
CAGGGTAATAAACCTGGTCA+GGG - Chr7:23200504-23200523 MsG0780037290.01.T01:intron 45.0%
CCTTCCCATGTTCTCAAAGA+AGG - Chr7:23201065-23201084 MsG0780037290.01.T01:intron 45.0%
CTGAAGATGTGGTTGCACTA+GGG + Chr7:23198468-23198487 None:intergenic 45.0%
GAAAAACAAGTTCCCCTGCT+TGG - Chr7:23199932-23199951 MsG0780037290.01.T01:intron 45.0%
GATTGCACCAAAACCAGAAC+CGG - Chr7:23200591-23200610 MsG0780037290.01.T01:intron 45.0%
GCATAACACTTTCCCTAGGA+AGG + Chr7:23199203-23199222 None:intergenic 45.0%
GCCACTGCATCTTCAGAATT+AGG - Chr7:23203485-23203504 MsG0780037290.01.T01:intron 45.0%
GGCAAAAGGACCACTAATAG+AGG + Chr7:23199797-23199816 None:intergenic 45.0%
GTTACTACCATCCAAAGCGA+GGG - Chr7:23203388-23203407 MsG0780037290.01.T01:intron 45.0%
TACCAAGCCTCACGAAATGT+TGG - Chr7:23200350-23200369 MsG0780037290.01.T01:intron 45.0%
TCAGGGTAATAAACCTGGTC+AGG - Chr7:23200503-23200522 MsG0780037290.01.T01:intron 45.0%
TCCAAAACAGGCTTGTAGCA+CGG - Chr7:23200643-23200662 MsG0780037290.01.T01:intron 45.0%
TCTGAAGATGTGGTTGCACT+AGG + Chr7:23198469-23198488 None:intergenic 45.0%
TGATGCTGAAAGTGAGCTGT+GGG - Chr7:23204035-23204054 MsG0780037290.01.T01:five_prime_UTR 45.0%
TGCGACGAGGAAAATAGTGT+GGG + Chr7:23199762-23199781 None:intergenic 45.0%
TGTTACTACCATCCAAAGCG+AGG - Chr7:23203387-23203406 MsG0780037290.01.T01:intron 45.0%
TTGATGCTGAAAGTGAGCTG+TGG - Chr7:23204034-23204053 MsG0780037290.01.T01:five_prime_UTR 45.0%
! AGAAAACAGAGCACTAGAGG+AGG - Chr7:23200713-23200732 MsG0780037290.01.T01:intron 45.0%
! AGCACGGAACTTGGATTTTG+AGG - Chr7:23202045-23202064 MsG0780037290.01.T01:intron 45.0%
! ATGTGAATAAGCGGGGTGTT+CGG - Chr7:23202691-23202710 MsG0780037290.01.T01:intron 45.0%
! CCTTCTTTGAGAACATGGGA+AGG + Chr7:23201068-23201087 None:intergenic 45.0%
! CTTGTAAGACTGGTTGTGAG+CGG + Chr7:23198602-23198621 None:intergenic 45.0%
! GCACGGAACTTGGATTTTGA+GGG - Chr7:23202046-23202065 MsG0780037290.01.T01:intron 45.0%
! GGTTGCACTAGGGTTTTTCT+TGG + Chr7:23198458-23198477 None:intergenic 45.0%
! TAGTGGTCCTTTTGCCTCTA+AGG - Chr7:23199801-23199820 MsG0780037290.01.T01:intron 45.0%
! TCTTGTGAGCCTTGTAAGAC+TGG + Chr7:23198612-23198631 None:intergenic 45.0%
! TGCACTAGGGTTTTTCTTGG+CGG + Chr7:23198455-23198474 None:intergenic 45.0%
!! CAGATCGTTTTGTTCGGTGA+CGG + Chr7:23202422-23202441 None:intergenic 45.0%
!! GAAGTGTGGTGATGCCTTTT+TGG + Chr7:23198649-23198668 None:intergenic 45.0%
!! TCGTCTGGTTGGTTTCTCAA+CGG + Chr7:23202211-23202230 None:intergenic 45.0%
!! TTTTGTGGGCCTTGTAAGAC+TGG + Chr7:23203560-23203579 None:intergenic 45.0%
!!! AGTGGCTCTAGGGTTTTGTT+CGG + Chr7:23203471-23203490 None:intergenic 45.0%
!!! AGTTTTCCCGGTTCTGGTTT+TGG + Chr7:23200601-23200620 None:intergenic 45.0%
!!! GCTCGCTGTTTTTTTGCAGT+GGG + Chr7:23202121-23202140 None:intergenic 45.0%
!!! GGATTCGCTTTTTACCGTGT+TGG + Chr7:23201955-23201974 None:intergenic 45.0%
!!! TGCTCGCTGTTTTTTTGCAG+TGG + Chr7:23202122-23202141 None:intergenic 45.0%
!!! TTCGCTTTTTACCGTGTTGG+CGG + Chr7:23201952-23201971 None:intergenic 45.0%
!! AATTATCAAAATATAATAAA+TGG + Chr7:23203186-23203205 None:intergenic 5.0%
!! CATATATATTATTAAAAAAA+AGG - Chr7:23201654-23201673 MsG0780037290.01.T01:intron 5.0%
!!! TATATATGTTTATTTTTTAT+AGG - Chr7:23202557-23202576 MsG0780037290.01.T01:intron 5.0%
AAGGGTCGACTGTTCGCTAA+GGG - Chr7:23199399-23199418 MsG0780037290.01.T01:intron 50.0%
ACCAGTCAAACGACCCAGAA+AGG - Chr7:23202274-23202293 MsG0780037290.01.T01:intron 50.0%
AGCCAACATTTCGTGAGGCT+TGG + Chr7:23200355-23200374 None:intergenic 50.0%
ATACCCCTTTGGTGGAAGTG+TGG + Chr7:23198663-23198682 None:intergenic 50.0%
ATTTGGATTCGACGGGATGG+AGG - Chr7:23202503-23202522 MsG0780037290.01.T01:intron 50.0%
CACGCTTAACACTTCTTCGG+TGG - Chr7:23199833-23199852 MsG0780037290.01.T01:intron 50.0%
CAGTTGAGTGTGCATTGGAC+AGG + Chr7:23200571-23200590 None:intergenic 50.0%
CATCACCACACTTCCACCAA+AGG - Chr7:23198655-23198674 MsG0780037290.01.T01:three_prime_UTR 50.0%
CCATCCACTTCCTGCAACAA+CGG - Chr7:23201847-23201866 MsG0780037290.01.T01:intron 50.0%
CGCTCACAACCAGTCTTACA+AGG - Chr7:23198600-23198619 MsG0780037290.01.T01:three_prime_UTR 50.0%
CTGTCCAATGCACACTCAAC+TGG - Chr7:23200569-23200588 MsG0780037290.01.T01:intron 50.0%
GACCACTAATAGAGGGGTTG+TGG + Chr7:23199789-23199808 None:intergenic 50.0%
GCAAGTTCAATCGGTTGGAC+TGG - Chr7:23200530-23200549 MsG0780037290.01.T01:intron 50.0%
GGGCACTCTATACCCAAGAT+AGG - Chr7:23199694-23199713 MsG0780037290.01.T01:intron 50.0%
GTGTGCATTGGACAGGTAAC+TGG + Chr7:23200564-23200583 None:intergenic 50.0%
TAAGGGTCGACTGTTCGCTA+AGG - Chr7:23199398-23199417 MsG0780037290.01.T01:intron 50.0%
TAGGACGCCTTAGAGGCAAA+AGG + Chr7:23199811-23199830 None:intergenic 50.0%
TCACCACACTTCCACCAAAG+GGG - Chr7:23198657-23198676 MsG0780037290.01.T01:three_prime_UTR 50.0%
TCAGGGTCCGCAAGTTCAAT+CGG - Chr7:23200521-23200540 MsG0780037290.01.T01:intron 50.0%
TCCCACAACCCCTCTATTAG+TGG - Chr7:23199784-23199803 MsG0780037290.01.T01:intron 50.0%
TCTGAAGATGCAGTGGCTCT+AGG + Chr7:23203482-23203501 None:intergenic 50.0%
TGTGTTTCCTCGCATACCTC+TGG + Chr7:23198799-23198818 None:intergenic 50.0%
TTTGGATTCGACGGGATGGA+GGG - Chr7:23202504-23202523 MsG0780037290.01.T01:intron 50.0%
! ACCGTGCTACAAGCCTGTTT+TGG + Chr7:23200647-23200666 None:intergenic 50.0%
! ACTTACACCCTCGCTTTGGA+TGG + Chr7:23203398-23203417 None:intergenic 50.0%
! CTGAAGATGCAGTGGCTCTA+GGG + Chr7:23203481-23203500 None:intergenic 50.0%
! TAAGGAACCAGAGGTATGCG+AGG - Chr7:23198789-23198808 MsG0780037290.01.T01:intron 50.0%
! TGAACCAGTTTTCCCGGTTC+TGG + Chr7:23200607-23200626 None:intergenic 50.0%
! TGTGAATAAGCGGGGTGTTC+GGG - Chr7:23202692-23202711 MsG0780037290.01.T01:intron 50.0%
! TTCTGCCGACTGTTCGCTAA+GGG - Chr7:23199381-23199400 MsG0780037290.01.T01:intron 50.0%
! TTTCTGCCGACTGTTCGCTA+AGG - Chr7:23199380-23199399 MsG0780037290.01.T01:intron 50.0%
!! AGTTGAGGGGAGTGCTTTGT+GGG - Chr7:23199116-23199135 MsG0780037290.01.T01:intron 50.0%
!! CGGAACTTGGATTTTGAGGG+TGG - Chr7:23202049-23202068 MsG0780037290.01.T01:intron 50.0%
!! CTTGGATTTTGAGGGTGGTG+AGG - Chr7:23202054-23202073 MsG0780037290.01.T01:intron 50.0%
!! GGCGGTCAGATCGTTTTGTT+CGG + Chr7:23202428-23202447 None:intergenic 50.0%
!! TGCTGTTAAGTTGGTTCGCG+TGG + Chr7:23201976-23201995 None:intergenic 50.0%
ACCGCCACACTTCCACCAAA+GGG - Chr7:23203604-23203623 MsG0780037290.01.T01:intron 55.0%
ACGACCCAGAAAGGCAACGA+AGG - Chr7:23202283-23202302 MsG0780037290.01.T01:intron 55.0%
AGCCTAACAGTCCAGTGCCT+CGG - Chr7:23202157-23202176 MsG0780037290.01.T01:intron 55.0%
ATAACAGAGCCACCCTTCGC+CGG - Chr7:23202458-23202477 MsG0780037290.01.T01:intron 55.0%
CCGTTGTTGCAGGAAGTGGA+TGG + Chr7:23201850-23201869 None:intergenic 55.0%
CTGCACTTACACCCTCGCTT+TGG + Chr7:23203402-23203421 None:intergenic 55.0%
GCCTTTCTGGGTCGTTTGAC+TGG + Chr7:23202278-23202297 None:intergenic 55.0%
GGTCCGCAAGTTCAATCGGT+TGG - Chr7:23200525-23200544 MsG0780037290.01.T01:intron 55.0%
GTCCAGTGCCTCGGATAAGA+CGG - Chr7:23202166-23202185 MsG0780037290.01.T01:intron 55.0%
GTCGACCCTTAGCGAACAGT+CGG + Chr7:23199389-23199408 None:intergenic 55.0%
TATGCTTCCGTGCGTACCTC+TGG + Chr7:23203751-23203770 None:intergenic 55.0%
TGCCTCGGATAAGACGGTGA+CGG - Chr7:23202172-23202191 MsG0780037290.01.T01:intron 55.0%
TTGGATTCGACGGGATGGAG+GGG - Chr7:23202505-23202524 MsG0780037290.01.T01:intron 55.0%
! ATGCTTGCTGCCGTTGTTGC+AGG + Chr7:23201860-23201879 None:intergenic 55.0%
! GTGAATAAGCGGGGTGTTCG+GGG - Chr7:23202693-23202712 MsG0780037290.01.T01:intron 55.0%
! TGAGGAACCAGAGGTACGCA+CGG - Chr7:23203741-23203760 MsG0780037290.01.T01:intron 55.0%
! TTGTTAGCGTGTTGGCGGTC+AGG + Chr7:23202082-23202101 None:intergenic 55.0%
!! ATACGCGATCTGGCTCTTCG+CGG + Chr7:23202327-23202346 None:intergenic 55.0%
!! ATCCGAGGCACTGGACTGTT+AGG + Chr7:23202162-23202181 None:intergenic 55.0%
!! GAGTTGAGGGGAGTGCTTTG+TGG - Chr7:23199115-23199134 MsG0780037290.01.T01:intron 55.0%
!! GTTGAGGGGAGTGCTTTGTG+GGG - Chr7:23199117-23199136 MsG0780037290.01.T01:intron 55.0%
!! TTGAGGGGAGTGCTTTGTGG+GGG - Chr7:23199118-23199137 MsG0780037290.01.T01:intron 55.0%
!! TTGCCGTTATGGACTGGGTC+AGG + Chr7:23201714-23201733 None:intergenic 55.0%
!!! GGCTCTAGGGTTTTGTTCGG+CGG + Chr7:23203468-23203487 None:intergenic 55.0%
CACCGCCACACTTCCACCAA+AGG - Chr7:23203603-23203622 MsG0780037290.01.T01:intron 60.0%
CACCGTCACCGTCTTATCCG+AGG + Chr7:23202177-23202196 None:intergenic 60.0%
CACCGTCTTATCCGAGGCAC+TGG + Chr7:23202171-23202190 None:intergenic 60.0%
CCGCCACACTTCCACCAAAG+GGG - Chr7:23203605-23203624 MsG0780037290.01.T01:intron 60.0%
CCGGCGGCAAGGGTTGAAAA+CGG - Chr7:23202477-23202496 MsG0780037290.01.T01:intron 60.0%
GAAGTGTGGCGGTGCCTCTT+TGG + Chr7:23203597-23203616 None:intergenic 60.0%
GACGGTTCGTCGAGGTTCTG+CGG + Chr7:23202404-23202423 None:intergenic 60.0%
GCGTGAGTAGGACGCCTTAG+AGG + Chr7:23199818-23199837 None:intergenic 60.0%
GCTGCCGTTGTTGCAGGAAG+TGG + Chr7:23201854-23201873 None:intergenic 60.0%
GGTGAGTTCGACCGCCAACA+CGG - Chr7:23201938-23201957 MsG0780037290.01.T01:intron 60.0%
TGAACTTGCGGACCCTGACC+AGG + Chr7:23200519-23200538 None:intergenic 60.0%
! CCCCTTTGGTGGAAGTGTGG+CGG + Chr7:23198660-23198679 None:intergenic 60.0%
! CCGTTTTCAACCCTTGCCGC+CGG + Chr7:23202480-23202499 None:intergenic 60.0%
! CTCGGATAAGACGGTGACGG+TGG - Chr7:23202175-23202194 MsG0780037290.01.T01:intron 60.0%
! CTGGCTCTTCGCGGATCTGT+GGG + Chr7:23202318-23202337 None:intergenic 60.0%
! GGATAAGACGGTGACGGTGG+TGG - Chr7:23202178-23202197 MsG0780037290.01.T01:intron 60.0%
! TGTTCGGTGACGGTTCGTCG+AGG + Chr7:23202412-23202431 None:intergenic 60.0%
!! TCTGGCTCTTCGCGGATCTG+TGG + Chr7:23202319-23202338 None:intergenic 60.0%
GATTCGACGGGATGGAGGGG+CGG - Chr7:23202508-23202527 MsG0780037290.01.T01:intron 65.0%
GGGTTGTGGGAGATGCGACG+AGG + Chr7:23199775-23199794 None:intergenic 65.0%
!! GGGGAGTGCTTTGTGGGGGT+TGG - Chr7:23199122-23199141 MsG0780037290.01.T01:intron 65.0%
ACAGAGCCACCCTTCGCCGG+CGG - Chr7:23202461-23202480 MsG0780037290.01.T01:intron 70.0%
CAACCCTTGCCGCCGGCGAA+GGG + Chr7:23202473-23202492 None:intergenic 70.0%
TCAACCCTTGCCGCCGGCGA+AGG + Chr7:23202474-23202493 None:intergenic 70.0%
ACGGGATGGAGGGGCGGCGA+GGG - Chr7:23202514-23202533 MsG0780037290.01.T01:intron 75.0%
CCACCCTTCGCCGGCGGCAA+GGG - Chr7:23202467-23202486 MsG0780037290.01.T01:intron 75.0%
! CCCTTGCCGCCGGCGAAGGG+TGG + Chr7:23202470-23202489 None:intergenic 80.0%
! GACGGGATGGAGGGGCGGCG+AGG - Chr7:23202513-23202532 MsG0780037290.01.T01:intron 80.0%
! GCCACCCTTCGCCGGCGGCA+AGG - Chr7:23202466-23202485 MsG0780037290.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 23198449 23204071 23198449 ID=MsG0780037290.01;Name=MsG0780037290.01
Chr7 mRNA 23198449 23204071 23198449 ID=MsG0780037290.01.T01;Parent=MsG0780037290.01;Name=MsG0780037290.01.T01;_AED=0.50;_eAED=0.51;_QI=47|0.75|0.6|1|0.25|0.2|5|300|124
Chr7 exon 23204027 23204071 23204027 ID=MsG0780037290.01.T01:exon:24963;Parent=MsG0780037290.01.T01
Chr7 exon 23203842 23203945 23203842 ID=MsG0780037290.01.T01:exon:24964;Parent=MsG0780037290.01.T01
Chr7 exon 23203690 23203747 23203690 ID=MsG0780037290.01.T01:exon:24965;Parent=MsG0780037290.01.T01
Chr7 exon 23198894 23199061 23198894 ID=MsG0780037290.01.T01:exon:24966;Parent=MsG0780037290.01.T01
Chr7 exon 23198449 23198795 23198449 ID=MsG0780037290.01.T01:exon:24967;Parent=MsG0780037290.01.T01
Chr7 five_prime_UTR 23204027 23204071 23204027 ID=MsG0780037290.01.T01:five_prime_utr;Parent=MsG0780037290.01.T01
Chr7 five_prime_UTR 23203944 23203945 23203944 ID=MsG0780037290.01.T01:five_prime_utr;Parent=MsG0780037290.01.T01
Chr7 CDS 23203842 23203943 23203842 ID=MsG0780037290.01.T01:cds;Parent=MsG0780037290.01.T01
Chr7 CDS 23203690 23203747 23203690 ID=MsG0780037290.01.T01:cds;Parent=MsG0780037290.01.T01
Chr7 CDS 23198894 23199061 23198894 ID=MsG0780037290.01.T01:cds;Parent=MsG0780037290.01.T01
Chr7 CDS 23198749 23198795 23198749 ID=MsG0780037290.01.T01:cds;Parent=MsG0780037290.01.T01
Chr7 three_prime_UTR 23198449 23198748 23198449 ID=MsG0780037290.01.T01:three_prime_utr;Parent=MsG0780037290.01.T01
Gene Sequence

>MsG0780037290.01.T01

ATGGCGAAGTCGAAGAATCACACCGCTCACAACCAGTCTTACAAGGCTCACAAGAATGGCATCAAGAAGCCAAAAAGGCATCACCACACTTCCACCAAAGGGATGGATCCAAAGTTTTTAAGGAACCAGAGGTATGCGAGGAAACACAACAAGAAAAATGGTCTCTCCGCCGAACAAAACCCTAGAGCCACTGCATCTTCAGAATTAGGTTTGTTGAATTTCAGAGATGGCGAAGTCGAAGAATCACACCGCTCACAACCAGTCTTACAAGGCCCACAAAAATGGCATCAAGAAGCCAAAGAGGCACCGCCACACTTCCACCAAAGGGATGGATCCAAAGTTTTTGAGGAACCAGAGGTACGCACGGAAGCATAA
Protein sequence

>MsG0780037290.01.T01

MAKSKNHTAHNQSYKAHKNGIKKPKRHHHTSTKGMDPKFLRNQRYARKHNKKNGLSAEQNPRATASSELGLLNFRDGEVEESHRSQPVLQGPQKWHQEAKEAPPHFHQRDGSKVFEEPEVRTEA*