Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006629.01.T01 | XP_003593461.1 | 100 | 146 | 0 | 0 | 1 | 146 | 1 | 146 | 8.96E-100 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006629.01.T01 | Q9FJX2 | 88.356 | 146 | 17 | 0 | 1 | 146 | 1 | 146 | 1.02E-91 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006629.01.T01 | G7ILF2 | 100.000 | 146 | 0 | 0 | 1 | 146 | 1 | 146 | 4.28e-100 | 293 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048922.01 | MsG0280006629.01 | 0.830153 | 3.446586e-55 | 3.601590e-52 |
| MsG0080048933.01 | MsG0280006629.01 | 0.801083 | 1.064551e-48 | 5.038754e-46 |
| MsG0180000096.01 | MsG0280006629.01 | 0.811715 | 6.094689e-51 | 3.800229e-48 |
| MsG0180000118.01 | MsG0280006629.01 | 0.905080 | 6.262258e-80 | 9.966186e-76 |
| MsG0180001169.01 | MsG0280006629.01 | 0.823820 | 1.127612e-53 | 9.815099e-51 |
| MsG0180001829.01 | MsG0280006629.01 | 0.883845 | 3.176647e-71 | 2.047434e-67 |
| MsG0180001837.01 | MsG0280006629.01 | 0.811850 | 5.696689e-51 | 3.564799e-48 |
| MsG0180002738.01 | MsG0280006629.01 | 0.839145 | 1.888034e-57 | 2.583786e-54 |
| MsG0180003585.01 | MsG0280006629.01 | 0.885707 | 6.447492e-72 | 4.471631e-68 |
| MsG0180003897.01 | MsG0280006629.01 | 0.935064 | 1.525459e-96 | 1.201679e-91 |
| MsG0180004503.01 | MsG0280006629.01 | 0.831669 | 1.464647e-55 | 1.600337e-52 |
| MsG0180004829.01 | MsG0280006629.01 | 0.887533 | 1.312617e-72 | 9.797897e-69 |
| MsG0180005384.01 | MsG0280006629.01 | 0.871396 | 7.058367e-67 | 2.842899e-63 |
| MsG0180005573.01 | MsG0280006629.01 | 0.861370 | 1.075873e-63 | 3.037650e-60 |
| MsG0180005789.01 | MsG0280006629.01 | 0.818860 | 1.572409e-52 | 1.190861e-49 |
| MsG0280006301.01 | MsG0280006629.01 | 0.827134 | 1.849593e-54 | 1.769780e-51 |
| MsG0280006629.01 | MsG0280006747.01 | 0.906990 | 8.209122e-81 | 1.426071e-76 |
| MsG0280006629.01 | MsG0280007055.01 | 0.931587 | 3.031074e-94 | 1.930493e-89 |
| MsG0280006629.01 | MsG0280007084.01 | 0.818770 | 1.647692e-52 | 1.244751e-49 |
| MsG0280006629.01 | MsG0280007606.01 | 0.803390 | 3.566815e-49 | 1.790143e-46 |
| MsG0280006629.01 | MsG0280007995.01 | 0.884961 | 1.225272e-71 | 8.254209e-68 |
| MsG0280006629.01 | MsG0280010203.01 | 0.838970 | 2.095851e-57 | 2.852892e-54 |
| MsG0280006629.01 | MsG0280010232.01 | 0.849490 | 3.127731e-60 | 5.939168e-57 |
| MsG0280006629.01 | MsG0280011308.01 | 0.831993 | 1.217708e-55 | 1.343425e-52 |
| MsG0280006629.01 | MsG0380014507.01 | 0.860568 | 1.886435e-63 | 5.179733e-60 |
| MsG0280006629.01 | MsG0380015446.01 | 0.844557 | 7.024628e-59 | 1.138385e-55 |
| MsG0280006629.01 | MsG0380015494.01 | 0.845977 | 2.899529e-59 | 4.917414e-56 |
| MsG0280006629.01 | MsG0380015766.01 | 0.816044 | 6.774465e-52 | 4.749002e-49 |
| MsG0280006629.01 | MsG0380015857.01 | 0.890766 | 7.320535e-74 | 6.242334e-70 |
| MsG0280006629.01 | MsG0380016607.01 | 0.820699 | 5.975973e-53 | 4.762627e-50 |
| MsG0280006629.01 | MsG0380016622.01 | 0.823185 | 1.587150e-53 | 1.356842e-50 |
| MsG0280006629.01 | MsG0380016653.01 | 0.834234 | 3.372034e-56 | 3.977116e-53 |
| MsG0280006629.01 | MsG0380016678.01 | 0.896513 | 3.432832e-76 | 3.726402e-72 |
| MsG0280006629.01 | MsG0380016732.01 | 0.827386 | 1.609667e-54 | 1.551864e-51 |
| MsG0280006629.01 | MsG0380016744.01 | 0.875263 | 3.535539e-68 | 1.640496e-64 |
| MsG0280006629.01 | MsG0380016760.01 | 0.859945 | 2.911438e-63 | 7.824924e-60 |
| MsG0280006629.01 | MsG0380017119.01 | 0.813090 | 3.051521e-51 | 1.973863e-48 |
| MsG0280006629.01 | MsG0480018164.01 | 0.895076 | 1.350957e-75 | 1.380228e-71 |
| MsG0280006629.01 | MsG0480019165.01 | 0.911212 | 7.850088e-83 | 1.664392e-78 |
| MsG0280006629.01 | MsG0480019632.01 | 0.857212 | 1.904127e-62 | 4.663894e-59 |
| MsG0280006629.01 | MsG0480020796.01 | 0.887044 | 2.014995e-72 | 1.474859e-68 |
| MsG0280006629.01 | MsG0480020895.01 | 0.880194 | 6.708328e-70 | 3.744534e-66 |
| MsG0280006629.01 | MsG0480020911.01 | 0.908094 | 2.488832e-81 | 4.545025e-77 |
| MsG0280006629.01 | MsG0480021279.01 | 0.930475 | 1.550765e-93 | 9.225172e-89 |
| MsG0280006629.01 | MsG0480021417.01 | 0.918901 | 8.785957e-87 | 2.743528e-82 |
| MsG0280006629.01 | MsG0480022006.01 | 0.870171 | 1.784398e-66 | 6.875289e-63 |
| MsG0280006629.01 | MsG0480022041.01 | 0.856785 | 2.544335e-62 | 6.141472e-59 |
| MsG0280006629.01 | MsG0480022302.01 | 0.803472 | 3.430170e-49 | 1.725223e-46 |
| MsG0280006629.01 | MsG0480022363.01 | 0.875666 | 2.573248e-68 | 1.211841e-64 |
| MsG0280006629.01 | MsG0480022789.01 | 0.845785 | 3.270996e-59 | 5.513015e-56 |
| MsG0280006629.01 | MsG0480022955.01 | 0.857952 | 1.149170e-62 | 2.885713e-59 |
| MsG0280006629.01 | MsG0480023380.01 | 0.896551 | 3.310479e-76 | 3.599447e-72 |
| MsG0280006629.01 | MsG0480023770.01 | 0.810911 | 9.106270e-51 | 5.559221e-48 |
| MsG0280006629.01 | MsG0480023774.01 | 0.899552 | 1.770154e-77 | 2.200160e-73 |
| MsG0280006629.01 | MsG0480023931.01 | 0.898915 | 3.321168e-77 | 4.010127e-73 |
| MsG0280006629.01 | MsG0480023970.01 | 0.818015 | 2.443814e-52 | 1.808042e-49 |
| MsG0280006629.01 | MsG0480023996.01 | 0.850926 | 1.238219e-60 | 2.464653e-57 |
| MsG0280006629.01 | MsG0580024059.01 | 0.839311 | 1.709592e-57 | 2.351693e-54 |
| MsG0280006629.01 | MsG0580024481.01 | 0.844821 | 5.961719e-59 | 9.741802e-56 |
| MsG0280006629.01 | MsG0580024540.01 | 0.896473 | 3.568276e-76 | 3.865652e-72 |
| MsG0280006629.01 | MsG0580024738.01 | 0.912597 | 1.622265e-83 | 3.677182e-79 |
| MsG0280006629.01 | MsG0580024894.01 | 0.853031 | 3.124935e-61 | 6.659864e-58 |
| MsG0280006629.01 | MsG0580025750.01 | 0.874494 | 6.466882e-68 | 2.917508e-64 |
| MsG0280006629.01 | MsG0580029702.01 | 0.839903 | 1.199415e-57 | 1.680344e-54 |
| MsG0280006629.01 | MsG0580030073.01 | 0.856266 | 3.612873e-62 | 8.573658e-59 |
| MsG0280006629.01 | MsG0680031368.01 | 0.898007 | 8.088106e-77 | 9.383775e-73 |
| MsG0280006629.01 | MsG0680032459.01 | 0.830778 | 2.424383e-55 | 2.579978e-52 |
| MsG0280006629.01 | MsG0680035611.01 | 0.901963 | 1.573968e-78 | 2.178748e-74 |
| MsG0280006629.01 | MsG0780036859.01 | 0.806901 | 6.566661e-50 | 3.606820e-47 |
| MsG0280006629.01 | MsG0780037290.01 | 0.803725 | 3.039514e-49 | 1.538710e-46 |
| MsG0280006629.01 | MsG0780038383.01 | 0.891206 | 4.909819e-74 | 4.262111e-70 |
| MsG0280006629.01 | MsG0780041058.01 | 0.860134 | 2.553248e-63 | 6.907265e-60 |
| MsG0280006629.01 | MsG0780041240.01 | 0.853986 | 1.662153e-61 | 3.657548e-58 |
| MsG0280006629.01 | MsG0780041244.01 | 0.871027 | 9.344457e-67 | 3.712897e-63 |
| MsG0280006629.01 | MsG0780041311.01 | 0.828074 | 1.100291e-54 | 1.082130e-51 |
| MsG0280006629.01 | MsG0780041461.01 | 0.832718 | 8.057617e-56 | 9.081953e-53 |
| MsG0280006629.01 | MsG0780041522.01 | 0.903757 | 2.492419e-79 | 3.741008e-75 |
| MsG0280006629.01 | MsG0780041790.01 | 0.851445 | 8.837188e-61 | 1.789100e-57 |
| MsG0280006629.01 | MsG0880041941.01 | 0.890696 | 7.803863e-74 | 6.633591e-70 |
| MsG0280006629.01 | MsG0880042517.01 | 0.911822 | 3.935272e-83 | 8.588462e-79 |
| MsG0280006629.01 | MsG0880042896.01 | 0.851888 | 6.617899e-61 | 1.358702e-57 |
| MsG0280006629.01 | MsG0880043076.01 | 0.898475 | 5.115904e-77 | 6.056584e-73 |
| MsG0280006629.01 | MsG0880043517.01 | 0.829090 | 6.250975e-55 | 6.332730e-52 |
| MsG0280006629.01 | MsG0880044204.01 | 0.810757 | 9.835804e-51 | 5.979818e-48 |
| MsG0280006629.01 | MsG0880045836.01 | 0.808102 | 3.653030e-50 | 2.070298e-47 |
| MsG0280006629.01 | MsG0880046220.01 | 0.883422 | 4.547390e-71 | 2.880690e-67 |
| MsG0280006629.01 | MsG0880046486.01 | 0.858911 | 5.952442e-63 | 1.543762e-59 |
| MsG0280006629.01 | MsG0880046760.01 | 0.826629 | 2.442105e-54 | 2.302729e-51 |
| MsG0280006629.01 | MsG0880047310.01 | 0.836568 | 8.671873e-57 | 1.097023e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006629.01.T01 | MTR_2g012450 | 100.000 | 146 | 0 | 0 | 1 | 146 | 1 | 146 | 1.09e-103 | 293 |
| MsG0280006629.01.T01 | MTR_5g015570 | 95.205 | 146 | 7 | 0 | 1 | 146 | 1 | 146 | 2.12e-90 | 259 |
| MsG0280006629.01.T01 | MTR_5g096540 | 91.096 | 146 | 13 | 0 | 1 | 146 | 1 | 146 | 4.44e-87 | 251 |
| MsG0280006629.01.T01 | MTR_4g126220 | 88.235 | 68 | 8 | 0 | 13 | 80 | 103 | 170 | 6.77e-38 | 127 |
| MsG0280006629.01.T01 | MTR_8g073140 | 56.977 | 86 | 10 | 1 | 30 | 115 | 1 | 59 | 2.75e-23 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006629.01.T01 | AT5G67510 | 88.356 | 146 | 17 | 0 | 1 | 146 | 1 | 146 | 1.04e-92 | 265 |
| MsG0280006629.01.T01 | AT3G49910 | 85.616 | 146 | 21 | 0 | 1 | 146 | 1 | 146 | 1.23e-91 | 262 |
Find 51 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATGCAGACCGTTGATT+AGG | 0.363868 | 2:-4290238 | None:intergenic |
| CATTGAACGGACGTTGTACT+TGG | 0.377101 | 2:+4290539 | None:intergenic |
| TCGCAAAGACGACGAAGTTC+AGG | 0.379749 | 2:-4290511 | MsG0280006629.01.T01:CDS |
| TTAGTGATAACAACCTTTGA+AGG | 0.395167 | 2:+4290360 | None:intergenic |
| ACTTCGTCGTCTTTGCGAAC+AGG | 0.416424 | 2:+4290516 | None:intergenic |
| GGGTCGTGCTGCTGCTGATA+AGG | 0.420559 | 2:-4290289 | MsG0280006629.01.T01:CDS |
| ACGGCTCTTCCTACGGCTGC+TGG | 0.422834 | 2:+4290635 | None:intergenic |
| ATGGATCCACCGTTAATGTT+GGG | 0.429545 | 2:-4290389 | MsG0280006629.01.T01:CDS |
| AAGACACGGCGGACGCTTGA+TGG | 0.437229 | 2:+4290594 | None:intergenic |
| AGGATTAACCCCAACATTAA+CGG | 0.438217 | 2:+4290380 | None:intergenic |
| CACTAAGCTCAGATTGGATA+AGG | 0.438891 | 2:-4290343 | MsG0280006629.01.T01:CDS |
| CCTGAGTAACCTTACCTTCA+CGG | 0.446679 | 2:+4290466 | None:intergenic |
| TGTTATCACTAAGCTCAGAT+TGG | 0.466490 | 2:-4290349 | MsG0280006629.01.T01:CDS |
| GACGAAGTTCAGGTCGTTCG+TGG | 0.488796 | 2:-4290501 | MsG0280006629.01.T01:CDS |
| ATTCAAAGGCCGTGAAGGTA+AGG | 0.498862 | 2:-4290475 | MsG0280006629.01.T01:CDS |
| CTCAGGTTTACCGTCGCAAG+TGG | 0.512762 | 2:-4290449 | MsG0280006629.01.T01:CDS |
| TGTTGGGGTTAATCCTTCAA+AGG | 0.524932 | 2:-4290373 | MsG0280006629.01.T01:CDS |
| GCTACTTGATCGTAAGGCTA+AGG | 0.528270 | 2:-4290310 | MsG0280006629.01.T01:CDS |
| CTACGGCTGCTGGAAACTCG+TGG | 0.530535 | 2:+4290645 | None:intergenic |
| AATGGATCCACCGTTAATGT+TGG | 0.535095 | 2:-4290390 | MsG0280006629.01.T01:CDS |
| TGCTGCTGCTGATAAGGAGA+AGG | 0.537077 | 2:-4290283 | MsG0280006629.01.T01:CDS |
| GAGCCGTAAGGCTCATTTCA+CGG | 0.545137 | 2:-4290619 | MsG0280006629.01.T01:CDS |
| ATCACAAGGGAGAAGGTGAA+TGG | 0.545267 | 2:-4290408 | MsG0280006629.01.T01:CDS |
| GAGCCTTACGGCTCTTCCTA+CGG | 0.547173 | 2:+4290628 | None:intergenic |
| CTACTTGATCGTAAGGCTAA+GGG | 0.553374 | 2:-4290309 | MsG0280006629.01.T01:CDS |
| GTCGTTCGTGGAACATTCAA+AGG | 0.554383 | 2:-4290489 | MsG0280006629.01.T01:CDS |
| TAAATCGCTACTTGATCGTA+AGG | 0.555125 | 2:-4290316 | MsG0280006629.01.T01:CDS |
| GGGTACTAAGTTTGCTCCTG+AGG | 0.563912 | 2:-4290262 | MsG0280006629.01.T01:CDS |
| AACGGACGTTGTACTTGGAT+CGG | 0.564652 | 2:+4290544 | None:intergenic |
| CCGTGAAGGTAAGGTTACTC+AGG | 0.566699 | 2:-4290466 | MsG0280006629.01.T01:CDS |
| CTTTGCGAACAGGCATTGAA+CGG | 0.570326 | 2:+4290526 | None:intergenic |
| TGGATCCACCGTTAATGTTG+GGG | 0.571824 | 2:-4290388 | MsG0280006629.01.T01:CDS |
| GTTGTACTTGGATCGGAGAT+CGG | 0.572814 | 2:+4290551 | None:intergenic |
| ACGGTCTGCATAATATCCTC+AGG | 0.575139 | 2:+4290246 | None:intergenic |
| GCGCCGTGAAATGAGCCTTA+CGG | 0.575259 | 2:+4290616 | None:intergenic |
| CGAACGCATCACAAGGGAGA+AGG | 0.580140 | 2:-4290415 | MsG0280006629.01.T01:CDS |
| GATCGGAGATCGGCGGAGAG+TGG | 0.584970 | 2:+4290561 | None:intergenic |
| TACGGCTGCTGGAAACTCGT+GGG | 0.586325 | 2:+4290646 | None:intergenic |
| TTCACATCGAACGCATCACA+AGG | 0.588472 | 2:-4290422 | MsG0280006629.01.T01:CDS |
| CAGCCGTAGGAAGAGCCGTA+AGG | 0.591177 | 2:-4290631 | MsG0280006629.01.T01:CDS |
| GGAACATTCAAAGGCCGTGA+AGG | 0.606062 | 2:-4290480 | MsG0280006629.01.T01:CDS |
| GATTCAAGAATCCTAATCAA+CGG | 0.625900 | 2:+4290227 | None:intergenic |
| GCTGCTGCTGATAAGGAGAA+GGG | 0.634378 | 2:-4290282 | MsG0280006629.01.T01:CDS |
| TGTGAATCACCCACTTGCGA+CGG | 0.658219 | 2:+4290439 | None:intergenic |
| TCAGGTTTACCGTCGCAAGT+GGG | 0.670860 | 2:-4290448 | MsG0280006629.01.T01:CDS |
| ATTAACCCCAACATTAACGG+TGG | 0.685240 | 2:+4290383 | None:intergenic |
| CACGAGTTTCCAGCAGCCGT+AGG | 0.686122 | 2:-4290644 | MsG0280006629.01.T01:CDS |
| GTGGCGCGCTCATTAAGACA+CGG | 0.705562 | 2:+4290580 | None:intergenic |
| GTACTTGGATCGGAGATCGG+CGG | 0.709980 | 2:+4290554 | None:intergenic |
| TCACATCGAACGCATCACAA+GGG | 0.710980 | 2:-4290421 | MsG0280006629.01.T01:CDS |
| GCGCGCTCATTAAGACACGG+CGG | 0.823768 | 2:+4290583 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TTAGTGATAACAACCTTTGA+AGG | + | Chr2:4290539-4290558 | None:intergenic | 30.0% | |
| AGGATTAACCCCAACATTAA+CGG | + | Chr2:4290519-4290538 | None:intergenic | 35.0% | |
| TAAATCGCTACTTGATCGTA+AGG | - | Chr2:4290580-4290599 | MsG0280006629.01.T01:CDS | 35.0% | |
| TGTTATCACTAAGCTCAGAT+TGG | - | Chr2:4290547-4290566 | MsG0280006629.01.T01:CDS | 35.0% | |
| AATGGATCCACCGTTAATGT+TGG | - | Chr2:4290506-4290525 | MsG0280006629.01.T01:CDS | 40.0% | |
| ATGGATCCACCGTTAATGTT+GGG | - | Chr2:4290507-4290526 | MsG0280006629.01.T01:CDS | 40.0% | |
| ATTAACCCCAACATTAACGG+TGG | + | Chr2:4290516-4290535 | None:intergenic | 40.0% | |
| CACTAAGCTCAGATTGGATA+AGG | - | Chr2:4290553-4290572 | MsG0280006629.01.T01:CDS | 40.0% | |
| CTACTTGATCGTAAGGCTAA+GGG | - | Chr2:4290587-4290606 | MsG0280006629.01.T01:CDS | 40.0% | |
| TGTTGGGGTTAATCCTTCAA+AGG | - | Chr2:4290523-4290542 | MsG0280006629.01.T01:CDS | 40.0% | |
| AACGGACGTTGTACTTGGAT+CGG | + | Chr2:4290355-4290374 | None:intergenic | 45.0% | |
| ACGGTCTGCATAATATCCTC+AGG | + | Chr2:4290653-4290672 | None:intergenic | 45.0% | |
| ATCACAAGGGAGAAGGTGAA+TGG | - | Chr2:4290488-4290507 | MsG0280006629.01.T01:CDS | 45.0% | |
| ATTCAAAGGCCGTGAAGGTA+AGG | - | Chr2:4290421-4290440 | MsG0280006629.01.T01:CDS | 45.0% | |
| CATTGAACGGACGTTGTACT+TGG | + | Chr2:4290360-4290379 | None:intergenic | 45.0% | |
| CCTGAGTAACCTTACCTTCA+CGG | + | Chr2:4290433-4290452 | None:intergenic | 45.0% | |
| GCTACTTGATCGTAAGGCTA+AGG | - | Chr2:4290586-4290605 | MsG0280006629.01.T01:CDS | 45.0% | |
| GTCGTTCGTGGAACATTCAA+AGG | - | Chr2:4290407-4290426 | MsG0280006629.01.T01:CDS | 45.0% | |
| GTTGTACTTGGATCGGAGAT+CGG | + | Chr2:4290348-4290367 | None:intergenic | 45.0% | |
| TCACATCGAACGCATCACAA+GGG | - | Chr2:4290475-4290494 | MsG0280006629.01.T01:CDS | 45.0% | |
| TGGATCCACCGTTAATGTTG+GGG | - | Chr2:4290508-4290527 | MsG0280006629.01.T01:CDS | 45.0% | |
| TTCACATCGAACGCATCACA+AGG | - | Chr2:4290474-4290493 | MsG0280006629.01.T01:CDS | 45.0% | |
| !! | CTTTGCGAACAGGCATTGAA+CGG | + | Chr2:4290373-4290392 | None:intergenic | 45.0% |
| ACTTCGTCGTCTTTGCGAAC+AGG | + | Chr2:4290383-4290402 | None:intergenic | 50.0% | |
| CCGTGAAGGTAAGGTTACTC+AGG | - | Chr2:4290430-4290449 | MsG0280006629.01.T01:CDS | 50.0% | |
| GAGCCGTAAGGCTCATTTCA+CGG | - | Chr2:4290277-4290296 | MsG0280006629.01.T01:CDS | 50.0% | |
| GCTGCTGCTGATAAGGAGAA+GGG | - | Chr2:4290614-4290633 | MsG0280006629.01.T01:CDS | 50.0% | |
| GGAACATTCAAAGGCCGTGA+AGG | - | Chr2:4290416-4290435 | MsG0280006629.01.T01:CDS | 50.0% | |
| TCAGGTTTACCGTCGCAAGT+GGG | - | Chr2:4290448-4290467 | MsG0280006629.01.T01:CDS | 50.0% | |
| TCGCAAAGACGACGAAGTTC+AGG | - | Chr2:4290385-4290404 | MsG0280006629.01.T01:CDS | 50.0% | |
| TGCTGCTGCTGATAAGGAGA+AGG | - | Chr2:4290613-4290632 | MsG0280006629.01.T01:CDS | 50.0% | |
| TGTGAATCACCCACTTGCGA+CGG | + | Chr2:4290460-4290479 | None:intergenic | 50.0% | |
| ! | GGGTACTAAGTTTGCTCCTG+AGG | - | Chr2:4290634-4290653 | MsG0280006629.01.T01:CDS | 50.0% |
| CGAACGCATCACAAGGGAGA+AGG | - | Chr2:4290481-4290500 | MsG0280006629.01.T01:CDS | 55.0% | |
| CTCAGGTTTACCGTCGCAAG+TGG | - | Chr2:4290447-4290466 | MsG0280006629.01.T01:CDS | 55.0% | |
| GACGAAGTTCAGGTCGTTCG+TGG | - | Chr2:4290395-4290414 | MsG0280006629.01.T01:CDS | 55.0% | |
| GAGCCTTACGGCTCTTCCTA+CGG | + | Chr2:4290271-4290290 | None:intergenic | 55.0% | |
| GCGCCGTGAAATGAGCCTTA+CGG | + | Chr2:4290283-4290302 | None:intergenic | 55.0% | |
| GTACTTGGATCGGAGATCGG+CGG | + | Chr2:4290345-4290364 | None:intergenic | 55.0% | |
| GTGGCGCGCTCATTAAGACA+CGG | + | Chr2:4290319-4290338 | None:intergenic | 55.0% | |
| TACGGCTGCTGGAAACTCGT+GGG | + | Chr2:4290253-4290272 | None:intergenic | 55.0% | |
| AAGACACGGCGGACGCTTGA+TGG | + | Chr2:4290305-4290324 | None:intergenic | 60.0% | |
| CACGAGTTTCCAGCAGCCGT+AGG | - | Chr2:4290252-4290271 | MsG0280006629.01.T01:CDS | 60.0% | |
| CAGCCGTAGGAAGAGCCGTA+AGG | - | Chr2:4290265-4290284 | MsG0280006629.01.T01:CDS | 60.0% | |
| CTACGGCTGCTGGAAACTCG+TGG | + | Chr2:4290254-4290273 | None:intergenic | 60.0% | |
| GCGCGCTCATTAAGACACGG+CGG | + | Chr2:4290316-4290335 | None:intergenic | 60.0% | |
| ! | GGGTCGTGCTGCTGCTGATA+AGG | - | Chr2:4290607-4290626 | MsG0280006629.01.T01:CDS | 60.0% |
| ACGGCTCTTCCTACGGCTGC+TGG | + | Chr2:4290264-4290283 | None:intergenic | 65.0% | |
| GATCGGAGATCGGCGGAGAG+TGG | + | Chr2:4290338-4290357 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 4290239 | 4290679 | 4290239 | ID=MsG0280006629.01;Name=MsG0280006629.01 |
| Chr2 | mRNA | 4290239 | 4290679 | 4290239 | ID=MsG0280006629.01.T01;Parent=MsG0280006629.01;Name=MsG0280006629.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|146 |
| Chr2 | exon | 4290239 | 4290679 | 4290239 | ID=MsG0280006629.01.T01:exon:1034;Parent=MsG0280006629.01.T01 |
| Chr2 | CDS | 4290239 | 4290679 | 4290239 | ID=MsG0280006629.01.T01:cds;Parent=MsG0280006629.01.T01 |
| Gene Sequence |
| Protein sequence |
