Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039864.01.T01 | AES80446.1 | 94.494 | 563 | 31 | 0 | 1 | 563 | 19 | 581 | 0 | 1104 |
| MsG0780039864.01.T03 | RHN47141.1 | 94.457 | 433 | 24 | 0 | 2 | 434 | 151 | 583 | 0 | 847 |
| MsG0780039864.01.T02 | AES80446.1 | 94.414 | 555 | 31 | 0 | 1 | 555 | 27 | 581 | 0 | 1088 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039864.01.T01 | Q9M219 | 47.133 | 558 | 283 | 3 | 7 | 562 | 5 | 552 | 1.29E-176 | 513 |
| MsG0780039864.01.T02 | Q9M219 | 48.224 | 535 | 269 | 2 | 22 | 554 | 24 | 552 | 3.91E-176 | 511 |
| MsG0780039864.01.T03 | Q9M219 | 47.454 | 432 | 219 | 2 | 2 | 431 | 127 | 552 | 9.76E-133 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039864.01.T01 | G7KSF7 | 94.494 | 563 | 31 | 0 | 1 | 563 | 19 | 581 | 0.0 | 1104 |
| MsG0780039864.01.T02 | G7KSF7 | 94.414 | 555 | 31 | 0 | 1 | 555 | 27 | 581 | 0.0 | 1088 |
| MsG0780039864.01.T03 | A0A396H3S7 | 94.457 | 433 | 24 | 0 | 2 | 434 | 151 | 583 | 0.0 | 847 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0780039864.01.T02 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048787.01 | MsG0780039864.01 | 0.803603 | 3.221840e-49 | 1.625985e-46 |
| MsG0180000555.01 | MsG0780039864.01 | 0.800366 | 1.490601e-48 | 6.928205e-46 |
| MsG0180000741.01 | MsG0780039864.01 | 0.812083 | 5.068102e-51 | 3.191654e-48 |
| MsG0180000821.01 | MsG0780039864.01 | 0.801236 | 9.902941e-49 | 4.705356e-46 |
| MsG0180000836.01 | MsG0780039864.01 | 0.821292 | 4.364377e-53 | 3.536162e-50 |
| MsG0180001173.01 | MsG0780039864.01 | 0.822263 | 2.600896e-53 | 2.166136e-50 |
| MsG0180001662.01 | MsG0780039864.01 | 0.813129 | 2.992740e-51 | 1.937869e-48 |
| MsG0180003932.01 | MsG0780039864.01 | 0.801602 | 8.332998e-49 | 3.995834e-46 |
| MsG0180004272.01 | MsG0780039864.01 | 0.817163 | 3.801718e-52 | 2.747873e-49 |
| MsG0180005443.01 | MsG0780039864.01 | 0.801279 | 9.706909e-49 | 4.617136e-46 |
| MsG0180005445.01 | MsG0780039864.01 | 0.808915 | 2.449362e-50 | 1.418059e-47 |
| MsG0180005451.01 | MsG0780039864.01 | 0.821755 | 3.411348e-53 | 2.800129e-50 |
| MsG0180005493.01 | MsG0780039864.01 | 0.800020 | 1.753332e-48 | 8.077639e-46 |
| MsG0280006367.01 | MsG0780039864.01 | 0.815877 | 7.379208e-52 | 5.148990e-49 |
| MsG0380012034.01 | MsG0780039864.01 | 0.819628 | 1.051031e-52 | 8.130649e-50 |
| MsG0380012067.01 | MsG0780039864.01 | 0.817579 | 3.065641e-52 | 2.241114e-49 |
| MsG0380013549.01 | MsG0780039864.01 | 0.801779 | 7.664202e-49 | 3.691788e-46 |
| MsG0680030880.01 | MsG0780039864.01 | 0.801853 | 7.402698e-49 | 3.572649e-46 |
| MsG0680033392.01 | MsG0780039864.01 | 0.834153 | 3.534416e-56 | 4.158197e-53 |
| MsG0680034757.01 | MsG0780039864.01 | 0.811230 | 7.769480e-51 | 4.783005e-48 |
| MsG0680035580.01 | MsG0780039864.01 | 0.804565 | 2.031947e-49 | 1.051119e-46 |
| MsG0480019984.01 | MsG0780039864.01 | -0.809748 | 1.623558e-50 | 9.611607e-48 |
| MsG0480020540.01 | MsG0780039864.01 | 0.807527 | 4.839678e-50 | 2.701871e-47 |
| MsG0480021900.01 | MsG0780039864.01 | 0.807688 | 4.472660e-50 | 2.507415e-47 |
| MsG0480021918.01 | MsG0780039864.01 | 0.800883 | 1.169473e-48 | 5.507428e-46 |
| MsG0480022094.01 | MsG0780039864.01 | 0.802549 | 5.322448e-49 | 2.614548e-46 |
| MsG0480022115.01 | MsG0780039864.01 | 0.815295 | 9.944978e-52 | 6.829686e-49 |
| MsG0480022228.01 | MsG0780039864.01 | 0.803393 | 3.561147e-49 | 1.787487e-46 |
| MsG0480023172.01 | MsG0780039864.01 | 0.819769 | 9.759032e-53 | 7.580072e-50 |
| MsG0480023659.01 | MsG0780039864.01 | 0.803304 | 3.716397e-49 | 1.861084e-46 |
| MsG0580024157.01 | MsG0780039864.01 | 0.804685 | 1.918464e-49 | 9.954986e-47 |
| MsG0580024304.01 | MsG0780039864.01 | 0.803126 | 4.044950e-49 | 2.016393e-46 |
| MsG0380015332.01 | MsG0780039864.01 | 0.808667 | 2.766663e-50 | 1.591373e-47 |
| MsG0380015702.01 | MsG0780039864.01 | 0.819730 | 9.961663e-53 | 7.728630e-50 |
| MsG0380015980.01 | MsG0780039864.01 | 0.811027 | 8.597628e-51 | 5.264897e-48 |
| MsG0380016387.01 | MsG0780039864.01 | 0.808956 | 2.399709e-50 | 1.390880e-47 |
| MsG0380016407.01 | MsG0780039864.01 | 0.810989 | 8.761310e-51 | 5.360133e-48 |
| MsG0380016737.01 | MsG0780039864.01 | 0.801567 | 8.473023e-49 | 4.059514e-46 |
| MsG0380016905.01 | MsG0780039864.01 | 0.815567 | 8.651361e-52 | 5.985942e-49 |
| MsG0380017506.01 | MsG0780039864.01 | 0.814316 | 1.639352e-51 | 1.096408e-48 |
| MsG0380017584.01 | MsG0780039864.01 | 0.808122 | 3.616935e-50 | 2.050955e-47 |
| MsG0380017589.01 | MsG0780039864.01 | 0.803003 | 4.289824e-49 | 2.131683e-46 |
| MsG0580029651.01 | MsG0780039864.01 | 0.800120 | 1.672560e-48 | 7.725276e-46 |
| MsG0580029919.01 | MsG0780039864.01 | 0.814674 | 1.366144e-51 | 9.225186e-49 |
| MsG0580029926.01 | MsG0780039864.01 | 0.813451 | 2.543063e-51 | 1.661412e-48 |
| MsG0580029927.01 | MsG0780039864.01 | 0.800484 | 1.410411e-48 | 6.574874e-46 |
| MsG0280006601.01 | MsG0780039864.01 | 0.808899 | 2.468652e-50 | 1.428607e-47 |
| MsG0280007764.01 | MsG0780039864.01 | 0.814715 | 1.338038e-51 | 9.045490e-49 |
| MsG0280008378.01 | MsG0780039864.01 | 0.805449 | 1.327526e-49 | 7.025450e-47 |
| MsG0280009748.01 | MsG0780039864.01 | 0.807494 | 4.917786e-50 | 2.743206e-47 |
| MsG0280010109.01 | MsG0780039864.01 | 0.830809 | 2.382489e-55 | 2.537751e-52 |
| MsG0680035658.01 | MsG0780039864.01 | 0.801251 | 9.835937e-49 | 4.675225e-46 |
| MsG0780036773.01 | MsG0780039864.01 | 0.828338 | 9.505694e-55 | 9.420315e-52 |
| MsG0780038051.01 | MsG0780039864.01 | 0.834596 | 2.734872e-56 | 3.260974e-53 |
| MsG0780038443.01 | MsG0780039864.01 | 0.809059 | 2.281196e-50 | 1.325858e-47 |
| MsG0780038910.01 | MsG0780039864.01 | -0.812049 | 5.155412e-51 | 3.243446e-48 |
| MsG0780039443.01 | MsG0780039864.01 | 0.807975 | 3.886946e-50 | 2.195509e-47 |
| MsG0780039717.01 | MsG0780039864.01 | 0.803735 | 3.025240e-49 | 1.531905e-46 |
| MsG0780039864.01 | MsG0780041300.01 | 0.811914 | 5.516277e-51 | 3.457715e-48 |
| MsG0780039864.01 | MsG0780041305.01 | 0.808439 | 3.094986e-50 | 1.769778e-47 |
| MsG0780039864.01 | MsG0880042760.01 | 0.808003 | 3.833334e-50 | 2.166903e-47 |
| MsG0780039864.01 | MsG0880043480.01 | 0.818409 | 1.989895e-52 | 1.488468e-49 |
| MsG0780039864.01 | MsG0880045433.01 | -0.814223 | 1.718994e-51 | 1.146690e-48 |
| MsG0780039864.01 | MsG0880046027.01 | 0.813036 | 3.137070e-51 | 2.026346e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039864.01.T01 | MTR_7g080620 | 94.494 | 563 | 31 | 0 | 1 | 563 | 19 | 581 | 0.0 | 1104 |
| MsG0780039864.01.T01 | MTR_8g005155 | 55.354 | 551 | 238 | 5 | 13 | 558 | 9 | 556 | 0.0 | 622 |
| MsG0780039864.01.T01 | MTR_5g084810 | 24.587 | 545 | 384 | 10 | 17 | 554 | 51 | 575 | 7.23e-46 | 171 |
| MsG0780039864.01.T01 | MTR_7g093000 | 23.979 | 563 | 397 | 11 | 11 | 556 | 13 | 561 | 8.30e-45 | 167 |
| MsG0780039864.01.T03 | MTR_7g080620 | 94.432 | 431 | 24 | 0 | 2 | 432 | 151 | 581 | 0.0 | 845 |
| MsG0780039864.01.T03 | MTR_8g005155 | 56.808 | 426 | 181 | 2 | 2 | 427 | 134 | 556 | 3.68e-176 | 504 |
| MsG0780039864.01.T03 | MTR_5g084810 | 21.718 | 419 | 307 | 7 | 9 | 423 | 174 | 575 | 1.93e-25 | 109 |
| MsG0780039864.01.T03 | MTR_7g093000 | 20.941 | 425 | 314 | 9 | 9 | 425 | 151 | 561 | 2.12e-22 | 100 |
| MsG0780039864.01.T02 | MTR_7g080620 | 94.414 | 555 | 31 | 0 | 1 | 555 | 27 | 581 | 0.0 | 1088 |
| MsG0780039864.01.T02 | MTR_8g005155 | 55.354 | 551 | 238 | 5 | 5 | 550 | 9 | 556 | 0.0 | 621 |
| MsG0780039864.01.T02 | MTR_5g084810 | 24.587 | 545 | 384 | 10 | 9 | 546 | 51 | 575 | 5.24e-46 | 171 |
| MsG0780039864.01.T02 | MTR_7g093000 | 23.979 | 563 | 397 | 11 | 3 | 548 | 13 | 561 | 5.99e-45 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039864.01.T01 | AT3G60400 | 47.133 | 558 | 283 | 3 | 7 | 562 | 5 | 552 | 1.31e-177 | 513 |
| MsG0780039864.01.T01 | AT4G19650 | 26.820 | 522 | 352 | 8 | 41 | 554 | 85 | 584 | 3.61e-55 | 196 |
| MsG0780039864.01.T01 | AT5G06811 | 28.119 | 537 | 355 | 11 | 30 | 553 | 52 | 570 | 3.06e-49 | 180 |
| MsG0780039864.01.T01 | AT4G19650 | 25.600 | 500 | 342 | 8 | 63 | 554 | 90 | 567 | 4.34e-47 | 174 |
| MsG0780039864.01.T01 | AT5G06810 | 25.405 | 555 | 374 | 12 | 15 | 553 | 44 | 574 | 3.60e-40 | 154 |
| MsG0780039864.01.T01 | AT5G45113 | 23.709 | 426 | 288 | 10 | 140 | 554 | 7 | 406 | 1.90e-19 | 91.3 |
| MsG0780039864.01.T03 | AT3G60400 | 47.454 | 432 | 219 | 2 | 2 | 431 | 127 | 552 | 9.95e-134 | 396 |
| MsG0780039864.01.T03 | AT4G19650 | 23.877 | 423 | 292 | 8 | 9 | 423 | 167 | 567 | 2.68e-30 | 123 |
| MsG0780039864.01.T03 | AT4G19650 | 23.877 | 423 | 292 | 8 | 9 | 423 | 184 | 584 | 2.84e-30 | 123 |
| MsG0780039864.01.T03 | AT5G06811 | 26.464 | 427 | 289 | 10 | 3 | 422 | 162 | 570 | 1.24e-27 | 115 |
| MsG0780039864.01.T03 | AT5G45113 | 23.278 | 421 | 296 | 9 | 9 | 423 | 7 | 406 | 6.61e-20 | 91.7 |
| MsG0780039864.01.T03 | AT5G06810 | 23.543 | 429 | 295 | 10 | 3 | 422 | 170 | 574 | 2.21e-19 | 91.3 |
| MsG0780039864.01.T02 | AT3G60400 | 48.224 | 535 | 269 | 2 | 22 | 554 | 24 | 552 | 3.99e-177 | 511 |
| MsG0780039864.01.T02 | AT4G19650 | 26.820 | 522 | 352 | 8 | 33 | 546 | 85 | 584 | 1.69e-55 | 197 |
| MsG0780039864.01.T02 | AT5G06811 | 28.119 | 537 | 355 | 11 | 22 | 545 | 52 | 570 | 2.13e-49 | 180 |
| MsG0780039864.01.T02 | AT4G19650 | 25.600 | 500 | 342 | 8 | 55 | 546 | 90 | 567 | 3.79e-47 | 174 |
| MsG0780039864.01.T02 | AT5G06810 | 25.405 | 555 | 374 | 12 | 7 | 545 | 44 | 574 | 5.27e-40 | 154 |
| MsG0780039864.01.T02 | AT5G45113 | 23.278 | 421 | 296 | 9 | 132 | 546 | 7 | 406 | 1.68e-19 | 91.7 |
Find 111 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGTGTGCTTTGTGATTT+TGG | 0.070594 | 7:-69863949 | MsG0780039864.01.T01:CDS |
| GCTCTATAATTTCATAATTT+TGG | 0.097711 | 7:+69862960 | None:intergenic |
| TGCATTGACTATGAATCTTT+TGG | 0.189736 | 7:-69863098 | MsG0780039864.01.T01:CDS |
| AAAGACTTCAAATTCGTTAA+TGG | 0.197617 | 7:+69864065 | None:intergenic |
| TTTGGTAATGTTGAAGTTAT+TGG | 0.228613 | 7:-69863820 | MsG0780039864.01.T01:CDS |
| GAGGATGTTATTGAAAATTT+TGG | 0.244503 | 7:-69863370 | MsG0780039864.01.T01:CDS |
| CCAAAGTTGTTCCCATTTCC+TGG | 0.259323 | 7:+69862918 | None:intergenic |
| AAGACTTCAAATTCGTTAAT+GGG | 0.265361 | 7:+69864066 | None:intergenic |
| TCTGTGTCTGATGGGGATTT+TGG | 0.281143 | 7:+69864275 | None:intergenic |
| ATGGAGAAGAGTTCTATATT+TGG | 0.292885 | 7:-69863895 | MsG0780039864.01.T01:CDS |
| TTGGTAATGTTGAAGTTATT+GGG | 0.297592 | 7:-69863819 | MsG0780039864.01.T01:CDS |
| TTTGGAGAGGTTTGGGAAGT+TGG | 0.299547 | 7:+69864293 | None:intergenic |
| GTAGAGTATTTCTGTGGATT+TGG | 0.306808 | 7:-69863520 | MsG0780039864.01.T01:CDS |
| CTTTGTTGGTTTAAAAGATT+TGG | 0.309206 | 7:-69863844 | MsG0780039864.01.T01:CDS |
| GAAGTTAGGTGTGTTGTATA+TGG | 0.320179 | 7:-69863914 | MsG0780039864.01.T01:CDS |
| AATTGCTCGAACCAATGTTT+TGG | 0.329948 | 7:+69862710 | None:intergenic |
| TGGCATGAGCTCTAAAGATT+TGG | 0.330860 | 7:-69863392 | MsG0780039864.01.T01:CDS |
| GGGTTTCCTTGGGAGAAGTT+AGG | 0.333161 | 7:-69863928 | MsG0780039864.01.T01:CDS |
| CGGCACAAGCAGTGAGTTAC+AGG | 0.339180 | 7:-69863065 | MsG0780039864.01.T01:CDS |
| TTTAATGTTATTTGAGAAAG+TGG | 0.339356 | 7:+69864107 | None:intergenic |
| TGAAGCGTTGAAGCTTGATT+TGG | 0.341445 | 7:-69863455 | MsG0780039864.01.T01:CDS |
| TGGAGAAGAGTTCTATATTT+GGG | 0.347223 | 7:-69863894 | MsG0780039864.01.T01:CDS |
| ATGGTTCTGTGATAAGTTAA+AGG | 0.357332 | 7:-69863281 | MsG0780039864.01.T01:CDS |
| GAGCTATGGGTTTGCAAGAA+TGG | 0.361647 | 7:-69863300 | MsG0780039864.01.T01:CDS |
| AGTTAAAGGGTGGGCATTAT+CGG | 0.361917 | 7:-69863267 | MsG0780039864.01.T01:CDS |
| ATTCAATTCTTGAGCGTAGA+AGG | 0.364335 | 7:+69863029 | None:intergenic |
| ATAACATTAAAAGAGTCATT+AGG | 0.366307 | 7:-69864095 | MsG0780039864.01.T01:CDS |
| AAGTGATAATGCAACATTGC+TGG | 0.384343 | 7:+69862878 | None:intergenic |
| GGGAACAACTTTGGACTGTC+TGG | 0.390764 | 7:-69862909 | MsG0780039864.01.T01:CDS |
| TTCTTACATAGATTAGGCTT+TGG | 0.390843 | 7:-69863127 | MsG0780039864.01.T01:CDS |
| AGTTGAAATTGAGGCTTTGT+TGG | 0.393745 | 7:-69863858 | MsG0780039864.01.T01:CDS |
| AAATCAAGCTTCAACGCTTC+AGG | 0.393972 | 7:+69863457 | None:intergenic |
| TTAAATTTCTTACATAGATT+AGG | 0.396832 | 7:-69863133 | MsG0780039864.01.T01:CDS |
| TGAAGTTATTGGGATTTGTT+TGG | 0.398881 | 7:-69863809 | MsG0780039864.01.T01:CDS |
| CTGTGGATTTGGTGGAAAGA+AGG | 0.405320 | 7:-69863509 | MsG0780039864.01.T01:CDS |
| ATCTGTACCTAGGTATAATT+CGG | 0.410370 | 7:+69862849 | None:intergenic |
| CCCATAGCTCTCATCACATT+TGG | 0.415076 | 7:+69863313 | None:intergenic |
| TTTGGTGTTGTGGAGGTAAT+CGG | 0.422094 | 7:+69864218 | None:intergenic |
| ATCGGTGATCATACTTTGAA+TGG | 0.423686 | 7:+69862781 | None:intergenic |
| CCAGGAAATGGGAACAACTT+TGG | 0.424489 | 7:-69862918 | MsG0780039864.01.T01:CDS |
| CATGAGCTCTAAAGATTTGG+AGG | 0.452449 | 7:-69863389 | MsG0780039864.01.T01:CDS |
| TGGTTTAAAAGATTTGGTTT+TGG | 0.453368 | 7:-69863838 | MsG0780039864.01.T01:CDS |
| ATTATTACATTGGCAATTGA+CGG | 0.455169 | 7:+69862681 | None:intergenic |
| AAGATTATCAAGATGGTTTG+AGG | 0.456096 | 7:-69863198 | MsG0780039864.01.T01:CDS |
| CATAGGGATAGATTATACTT+TGG | 0.460683 | 7:-69864034 | MsG0780039864.01.T01:CDS |
| TTGAGGGAAATGTAGATTCA+TGG | 0.468819 | 7:-69863669 | MsG0780039864.01.T01:CDS |
| TGGTGGAAAGAAGGAGGAAG+TGG | 0.471562 | 7:-69863500 | MsG0780039864.01.T01:CDS |
| TCTTTGGGGAGTTATGTTGA+GGG | 0.476597 | 7:-69863685 | MsG0780039864.01.T01:CDS |
| GAGTATTTCTGTGGATTTGG+TGG | 0.478331 | 7:-69863517 | MsG0780039864.01.T01:CDS |
| CCATACGTGGCTTACTGAAA+GGG | 0.479203 | 7:-69862825 | MsG0780039864.01.T01:CDS |
| ATAGATGAAGGGTATGGATT+TGG | 0.490694 | 7:+69864200 | None:intergenic |
| CGGGATAAAGATTATCAAGA+TGG | 0.492595 | 7:-69863205 | MsG0780039864.01.T01:CDS |
| CCCTTTCAGTAAGCCACGTA+TGG | 0.493524 | 7:+69862825 | None:intergenic |
| AATGGATGGAAGGGTAATGT+AGG | 0.497129 | 7:-69863607 | MsG0780039864.01.T01:CDS |
| GAAAAGAACAGCTTATCATT+CGG | 0.501059 | 7:+69863997 | None:intergenic |
| GGAAGTGGGTCAAATTCAAA+AGG | 0.502040 | 7:-69863764 | MsG0780039864.01.T01:CDS |
| TGGTTCTGTGATAAGTTAAA+GGG | 0.503197 | 7:-69863280 | MsG0780039864.01.T01:CDS |
| CAAGTGATCGCAATGAAGAC+CGG | 0.503592 | 7:-69863225 | MsG0780039864.01.T01:CDS |
| TTCTTTGGGGAGTTATGTTG+AGG | 0.504050 | 7:-69863686 | MsG0780039864.01.T01:CDS |
| ACTTCCTCACTCAAAACAAA+AGG | 0.505183 | 7:+69863781 | None:intergenic |
| CATCTTGATAATCTTTATCC+CGG | 0.516234 | 7:+69863206 | None:intergenic |
| AGCAATGTTGCATTATCACT+TGG | 0.516606 | 7:-69862876 | MsG0780039864.01.T01:CDS |
| TCCATACGTGGCTTACTGAA+AGG | 0.518843 | 7:-69862826 | MsG0780039864.01.T01:CDS |
| AAATACCACAATTATTACAT+TGG | 0.521406 | 7:+69862671 | None:intergenic |
| CCAAATGTGATGAGAGCTAT+GGG | 0.525151 | 7:-69863313 | MsG0780039864.01.T01:CDS |
| ACCAAATGTGATGAGAGCTA+TGG | 0.530073 | 7:-69863314 | MsG0780039864.01.T01:CDS |
| TACGATTTGAATGGATGGAA+GGG | 0.534342 | 7:-69863616 | MsG0780039864.01.T01:CDS |
| TTACGATTTGAATGGATGGA+AGG | 0.534900 | 7:-69863617 | MsG0780039864.01.T01:CDS |
| ACATGGTTTCTGTGTCTGAT+GGG | 0.535641 | 7:+69864267 | None:intergenic |
| TGTGTTGGGAACAATTAGAA+TGG | 0.537589 | 7:-69863344 | MsG0780039864.01.T01:CDS |
| CCTCACAAATCTCATTTCAA+AGG | 0.541683 | 7:-69864145 | MsG0780039864.01.T01:CDS |
| GTGTTGAAGAGTTGAAATTG+AGG | 0.549592 | 7:-69863867 | MsG0780039864.01.T01:CDS |
| ATCCAGCTGCTCCAAAACAT+TGG | 0.550499 | 7:-69862721 | MsG0780039864.01.T01:CDS |
| TTGGAGCTGTTGAAACACTT+TGG | 0.555886 | 7:-69863412 | MsG0780039864.01.T01:CDS |
| GACATGGTTTCTGTGTCTGA+TGG | 0.564066 | 7:+69864266 | None:intergenic |
| ATTCTCAAAGCTCTGCATGA+TGG | 0.566277 | 7:-69863008 | MsG0780039864.01.T01:CDS |
| GGGTAATGTAGGAGAACTCA+TGG | 0.567143 | 7:-69863596 | MsG0780039864.01.T01:CDS |
| CTTTGAAATGAGATTTGTGA+GGG | 0.572972 | 7:+69864146 | None:intergenic |
| CATAAAGTAGAGTATTTCTG+TGG | 0.577594 | 7:-69863526 | MsG0780039864.01.T01:CDS |
| GAAGCTTGATTTGGAGAAGA+CGG | 0.580147 | 7:-69863446 | MsG0780039864.01.T01:CDS |
| TTCTGTGATAAGTTAAAGGG+TGG | 0.581828 | 7:-69863277 | MsG0780039864.01.T01:CDS |
| TGGATTTGGTGGAAAGAAGG+AGG | 0.582914 | 7:-69863506 | MsG0780039864.01.T01:CDS |
| ATTTGTTGATCACAAAGAAG+AGG | 0.582958 | 7:-69863557 | MsG0780039864.01.T01:CDS |
| TTTGAGCTTCGTGAATGACA+TGG | 0.585863 | 7:+69864250 | None:intergenic |
| GAAGACGGTGATTAATGTGT+TGG | 0.586071 | 7:-69863431 | MsG0780039864.01.T01:CDS |
| AAGTGATCGCAATGAAGACC+GGG | 0.587085 | 7:-69863224 | MsG0780039864.01.T01:CDS |
| TTCTGCATAGATGAAGGGTA+TGG | 0.589219 | 7:+69864194 | None:intergenic |
| TTAATGTTATTTGAGAAAGT+GGG | 0.590303 | 7:+69864108 | None:intergenic |
| AGACTTCAAATTCGTTAATG+GGG | 0.593368 | 7:+69864067 | None:intergenic |
| GGTAATGTAGGAGAACTCAT+GGG | 0.593941 | 7:-69863595 | MsG0780039864.01.T01:CDS |
| CATGGTTTCTGTGTCTGATG+GGG | 0.598267 | 7:+69864268 | None:intergenic |
| GTTGTGGAGGTAATCGGTGA+GGG | 0.598909 | 7:+69864224 | None:intergenic |
| AGGGTATGGATTTGGTGTTG+TGG | 0.604470 | 7:+69864208 | None:intergenic |
| AATGTGTTCTGCATAGATGA+AGG | 0.618079 | 7:+69864188 | None:intergenic |
| TTCATCTATGCAGAACACAT+TGG | 0.624736 | 7:-69864186 | MsG0780039864.01.T01:CDS |
| ATGTGTTCTGCATAGATGAA+GGG | 0.625322 | 7:+69864189 | None:intergenic |
| AACACACCTAACTTCTCCCA+AGG | 0.625967 | 7:+69863922 | None:intergenic |
| GTATGGATTTGGTGTTGTGG+AGG | 0.635398 | 7:+69864211 | None:intergenic |
| CATACGTGGCTTACTGAAAG+GGG | 0.635482 | 7:-69862824 | MsG0780039864.01.T01:CDS |
| GAAGTGGGTCAAATTCAAAA+GGG | 0.636084 | 7:-69863763 | MsG0780039864.01.T01:CDS |
| TGGGCATTATCGGTTGCTAG+CGG | 0.638664 | 7:-69863257 | MsG0780039864.01.T01:CDS |
| AAATGTAGATTCATGGCATG+AGG | 0.639289 | 7:-69863662 | MsG0780039864.01.T01:CDS |
| TGTTGTGGAGGTAATCGGTG+AGG | 0.650161 | 7:+69864223 | None:intergenic |
| TGGATGACCGAATTATACCT+AGG | 0.659803 | 7:-69862856 | MsG0780039864.01.T01:CDS |
| CTAGGTACAGATTCCATACG+TGG | 0.660432 | 7:-69862838 | MsG0780039864.01.T01:CDS |
| GTAATGTAGGAGAACTCATG+GGG | 0.661705 | 7:-69863594 | MsG0780039864.01.T01:CDS |
| TCTGTGATAAGTTAAAGGGT+GGG | 0.664345 | 7:-69863276 | MsG0780039864.01.T01:CDS |
| ATGTAGGAGAACTCATGGGG+AGG | 0.683085 | 7:-69863591 | MsG0780039864.01.T01:CDS |
| CACGTATGGAATCTGTACCT+AGG | 0.683828 | 7:+69862839 | None:intergenic |
| CCTTTGAAATGAGATTTGTG+AGG | 0.730568 | 7:+69864145 | None:intergenic |
| GCGGTGGAGGAAGAAGAACA+TGG | 0.740499 | 7:+69864338 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATTTCTTACATAGATT+AGG | - | Chr7:69863912-69863931 | MsG0780039864.01.T01:CDS | 15.0% |
| !! | ATAACATTAAAAGAGTCATT+AGG | - | Chr7:69862950-69862969 | MsG0780039864.01.T01:CDS | 20.0% |
| !!! | AATTTTCTTGGATAATTCTT+TGG | - | Chr7:69863344-69863363 | MsG0780039864.01.T01:CDS | 20.0% |
| !!! | ATTTTCTTGGATAATTCTTT+GGG | - | Chr7:69863345-69863364 | MsG0780039864.01.T01:CDS | 20.0% |
| !!! | GCTCTATAATTTCATAATTT+TGG | + | Chr7:69864088-69864107 | None:intergenic | 20.0% |
| !!! | TGATCTAAAGTTAATTTTCT+TGG | - | Chr7:69863332-69863351 | MsG0780039864.01.T01:CDS | 20.0% |
| !!! | TTAATGTTATTTGAGAAAGT+GGG | + | Chr7:69862940-69862959 | None:intergenic | 20.0% |
| !!! | TTTAATGTTATTTGAGAAAG+TGG | + | Chr7:69862941-69862960 | None:intergenic | 20.0% |
| ! | AAAGACTTCAAATTCGTTAA+TGG | + | Chr7:69862983-69863002 | None:intergenic | 25.0% |
| ! | AAGACTTCAAATTCGTTAAT+GGG | + | Chr7:69862982-69863001 | None:intergenic | 25.0% |
| !! | GAGGATGTTATTGAAAATTT+TGG | - | Chr7:69863675-69863694 | MsG0780039864.01.T01:CDS | 25.0% |
| !! | TACAAATTTCTTTTCGCTAT+CGG | + | Chr7:69864285-69864304 | None:intergenic | 25.0% |
| !! | TTTTCTTGGATAATTCTTTG+GGG | - | Chr7:69863346-69863365 | MsG0780039864.01.T01:CDS | 25.0% |
| !!! | AAAAGTGAATTTTTTCAACC+AGG | - | Chr7:69864109-69864128 | MsG0780039864.01.T01:CDS | 25.0% |
| !!! | AAGTCTTTTTTGAAAGCATA+GGG | - | Chr7:69862995-69863014 | MsG0780039864.01.T01:CDS | 25.0% |
| !!! | AATTTTTTCAACCAGGAAAT+GGG | - | Chr7:69864116-69864135 | MsG0780039864.01.T01:CDS | 25.0% |
| !!! | CGATTTTTTTACGATTTGAA+TGG | - | Chr7:69863420-69863439 | MsG0780039864.01.T01:CDS | 25.0% |
| !!! | CTTTGTTGGTTTAAAAGATT+TGG | - | Chr7:69863201-69863220 | MsG0780039864.01.T01:CDS | 25.0% |
| !!! | TGGTTTAAAAGATTTGGTTT+TGG | - | Chr7:69863207-69863226 | MsG0780039864.01.T01:CDS | 25.0% |
| !!! | TTGGTAATGTTGAAGTTATT+GGG | - | Chr7:69863226-69863245 | MsG0780039864.01.T01:CDS | 25.0% |
| !!! | TTTGGTAATGTTGAAGTTAT+TGG | - | Chr7:69863225-69863244 | MsG0780039864.01.T01:CDS | 25.0% |
| !!! | TTTTTTACGATTTGAATGGA+TGG | - | Chr7:69863424-69863443 | MsG0780039864.01.T01:CDS | 25.0% |
| AAGATTATCAAGATGGTTTG+AGG | - | Chr7:69863847-69863866 | MsG0780039864.01.T01:CDS | 30.0% | |
| AGACTTCAAATTCGTTAATG+GGG | + | Chr7:69862981-69863000 | None:intergenic | 30.0% | |
| ATCTGTACCTAGGTATAATT+CGG | + | Chr7:69864199-69864218 | None:intergenic | 30.0% | |
| ATGGAGAAGAGTTCTATATT+TGG | - | Chr7:69863150-69863169 | MsG0780039864.01.T01:CDS | 30.0% | |
| CATAGGGATAGATTATACTT+TGG | - | Chr7:69863011-69863030 | MsG0780039864.01.T01:CDS | 30.0% | |
| GAAAAGAACAGCTTATCATT+CGG | + | Chr7:69863051-69863070 | None:intergenic | 30.0% | |
| TGGAGAAGAGTTCTATATTT+GGG | - | Chr7:69863151-69863170 | MsG0780039864.01.T01:CDS | 30.0% | |
| TTCTTACATAGATTAGGCTT+TGG | - | Chr7:69863918-69863937 | MsG0780039864.01.T01:CDS | 30.0% | |
| ! | ATGGTTCTGTGATAAGTTAA+AGG | - | Chr7:69863764-69863783 | MsG0780039864.01.T01:CDS | 30.0% |
| ! | ATTTGTTGATCACAAAGAAG+AGG | - | Chr7:69863488-69863507 | MsG0780039864.01.T01:CDS | 30.0% |
| ! | CATAAAGTAGAGTATTTCTG+TGG | - | Chr7:69863519-69863538 | MsG0780039864.01.T01:CDS | 30.0% |
| ! | CATCTTGATAATCTTTATCC+CGG | + | Chr7:69863842-69863861 | None:intergenic | 30.0% |
| ! | CTGGATGAATTTTAAACACT+CGG | + | Chr7:69864310-69864329 | None:intergenic | 30.0% |
| ! | TGAAGTTATTGGGATTTGTT+TGG | - | Chr7:69863236-69863255 | MsG0780039864.01.T01:CDS | 30.0% |
| ! | TGGATGAATTTTAAACACTC+GGG | + | Chr7:69864309-69864328 | None:intergenic | 30.0% |
| ! | TGGTTCTGTGATAAGTTAAA+GGG | - | Chr7:69863765-69863784 | MsG0780039864.01.T01:CDS | 30.0% |
| !! | CTTTGAAATGAGATTTGTGA+GGG | + | Chr7:69862902-69862921 | None:intergenic | 30.0% |
| !! | GAAAATTTTGGTCATGTGTT+GGG | - | Chr7:69863687-69863706 | MsG0780039864.01.T01:CDS | 30.0% |
| !! | TGAAAATTTTGGTCATGTGT+TGG | - | Chr7:69863686-69863705 | MsG0780039864.01.T01:CDS | 30.0% |
| !!! | AATTTTGGTTCAGAATCCTT+GGG | + | Chr7:69864073-69864092 | None:intergenic | 30.0% |
| !!! | CAAATTCAAAAGGGTGTTTT+TGG | - | Chr7:69863291-69863310 | MsG0780039864.01.T01:CDS | 30.0% |
| !!! | GAAGTCTTTTTTGAAAGCAT+AGG | - | Chr7:69862994-69863013 | MsG0780039864.01.T01:CDS | 30.0% |
| !!! | GAATTTTTTCAACCAGGAAA+TGG | - | Chr7:69864115-69864134 | MsG0780039864.01.T01:CDS | 30.0% |
| !!! | TAATTTTGGTTCAGAATCCT+TGG | + | Chr7:69864074-69864093 | None:intergenic | 30.0% |
| !!! | TGCATTGACTATGAATCTTT+TGG | - | Chr7:69863947-69863966 | MsG0780039864.01.T01:CDS | 30.0% |
| !!! | TTTTCCTTTTGTTTTGAGTG+AGG | - | Chr7:69863260-69863279 | MsG0780039864.01.T01:CDS | 30.0% |
| AAATGTAGATTCATGGCATG+AGG | - | Chr7:69863383-69863402 | MsG0780039864.01.T01:CDS | 35.0% | |
| AATGTGTTCTGCATAGATGA+AGG | + | Chr7:69862860-69862879 | None:intergenic | 35.0% | |
| ACTTCCTCACTCAAAACAAA+AGG | + | Chr7:69863267-69863286 | None:intergenic | 35.0% | |
| AGCAATGTTGCATTATCACT+TGG | - | Chr7:69864169-69864188 | MsG0780039864.01.T01:CDS | 35.0% | |
| ATCGGTGATCATACTTTGAA+TGG | + | Chr7:69864267-69864286 | None:intergenic | 35.0% | |
| ATGTGTTCTGCATAGATGAA+GGG | + | Chr7:69862859-69862878 | None:intergenic | 35.0% | |
| ATTCAATTCTTGAGCGTAGA+AGG | + | Chr7:69864019-69864038 | None:intergenic | 35.0% | |
| CCTCACAAATCTCATTTCAA+AGG | - | Chr7:69862900-69862919 | MsG0780039864.01.T01:CDS | 35.0% | |
| CGGGATAAAGATTATCAAGA+TGG | - | Chr7:69863840-69863859 | MsG0780039864.01.T01:CDS | 35.0% | |
| GAAGTGGGTCAAATTCAAAA+GGG | - | Chr7:69863282-69863301 | MsG0780039864.01.T01:CDS | 35.0% | |
| GAAGTTAGGTGTGTTGTATA+TGG | - | Chr7:69863131-69863150 | MsG0780039864.01.T01:CDS | 35.0% | |
| GTGTTGAAGAGTTGAAATTG+AGG | - | Chr7:69863178-69863197 | MsG0780039864.01.T01:CDS | 35.0% | |
| TACGATTTGAATGGATGGAA+GGG | - | Chr7:69863429-69863448 | MsG0780039864.01.T01:CDS | 35.0% | |
| TCTGTGATAAGTTAAAGGGT+GGG | - | Chr7:69863769-69863788 | MsG0780039864.01.T01:CDS | 35.0% | |
| TGTGTTGGGAACAATTAGAA+TGG | - | Chr7:69863701-69863720 | MsG0780039864.01.T01:CDS | 35.0% | |
| TTACGATTTGAATGGATGGA+AGG | - | Chr7:69863428-69863447 | MsG0780039864.01.T01:CDS | 35.0% | |
| TTCATCTATGCAGAACACAT+TGG | - | Chr7:69862859-69862878 | MsG0780039864.01.T01:CDS | 35.0% | |
| TTCTGTGATAAGTTAAAGGG+TGG | - | Chr7:69863768-69863787 | MsG0780039864.01.T01:CDS | 35.0% | |
| TTGAGGGAAATGTAGATTCA+TGG | - | Chr7:69863376-69863395 | MsG0780039864.01.T01:CDS | 35.0% | |
| ! | AAGTGATAATGCAACATTGC+TGG | + | Chr7:69864170-69864189 | None:intergenic | 35.0% |
| ! | AATCTTTTGGATCGTTTGCA+CGG | - | Chr7:69863960-69863979 | MsG0780039864.01.T01:CDS | 35.0% |
| ! | AATTGCTCGAACCAATGTTT+TGG | + | Chr7:69864338-69864357 | None:intergenic | 35.0% |
| ! | AGTTGAAATTGAGGCTTTGT+TGG | - | Chr7:69863187-69863206 | MsG0780039864.01.T01:CDS | 35.0% |
| ! | ATAGATGAAGGGTATGGATT+TGG | + | Chr7:69862848-69862867 | None:intergenic | 35.0% |
| ! | CTTGTGTGCTTTGTGATTTT+GGG | - | Chr7:69863097-69863116 | MsG0780039864.01.T01:CDS | 35.0% |
| ! | GTAGAGTATTTCTGTGGATT+TGG | - | Chr7:69863525-69863544 | MsG0780039864.01.T01:CDS | 35.0% |
| ! | TGATAAGCTGTTCTTTTCAG+AGG | - | Chr7:69863053-69863072 | MsG0780039864.01.T01:CDS | 35.0% |
| !! | CCTTTGAAATGAGATTTGTG+AGG | + | Chr7:69862903-69862922 | None:intergenic | 35.0% |
| !!! | ATTTTGGTTCAGAATCCTTG+GGG | + | Chr7:69864072-69864091 | None:intergenic | 35.0% |
| !!! | TTGTGATTTTGGGTTTCCTT+GGG | - | Chr7:69863107-69863126 | MsG0780039864.01.T01:CDS | 35.0% |
| !!! | TTTGTGATTTTGGGTTTCCT+TGG | - | Chr7:69863106-69863125 | MsG0780039864.01.T01:CDS | 35.0% |
| !!! | TTTGTTTTGAGTGAGGAAGT+GGG | - | Chr7:69863267-69863286 | MsG0780039864.01.T01:CDS | 35.0% |
| !!! | TTTTGTTTTGAGTGAGGAAG+TGG | - | Chr7:69863266-69863285 | MsG0780039864.01.T01:CDS | 35.0% |
| !!! | TTTTTGTGGTGGTGGAAAAA+TGG | + | Chr7:69862732-69862751 | None:intergenic | 35.0% |
| AAATCAAGCTTCAACGCTTC+AGG | + | Chr7:69863591-69863610 | None:intergenic | 40.0% | |
| AATGGATGGAAGGGTAATGT+AGG | - | Chr7:69863438-69863457 | MsG0780039864.01.T01:CDS | 40.0% | |
| ACATGGTTTCTGTGTCTGAT+GGG | + | Chr7:69862781-69862800 | None:intergenic | 40.0% | |
| ACCAAATGTGATGAGAGCTA+TGG | - | Chr7:69863731-69863750 | MsG0780039864.01.T01:CDS | 40.0% | |
| AGTTAAAGGGTGGGCATTAT+CGG | - | Chr7:69863778-69863797 | MsG0780039864.01.T01:CDS | 40.0% | |
| ATTCTCAAAGCTCTGCATGA+TGG | - | Chr7:69864037-69864056 | MsG0780039864.01.T01:CDS | 40.0% | |
| CCAAATGTGATGAGAGCTAT+GGG | - | Chr7:69863732-69863751 | MsG0780039864.01.T01:CDS | 40.0% | |
| GAAGACGGTGATTAATGTGT+TGG | - | Chr7:69863614-69863633 | MsG0780039864.01.T01:CDS | 40.0% | |
| GGAAGTGGGTCAAATTCAAA+AGG | - | Chr7:69863281-69863300 | MsG0780039864.01.T01:CDS | 40.0% | |
| GGTAATGTAGGAGAACTCAT+GGG | - | Chr7:69863450-69863469 | MsG0780039864.01.T01:CDS | 40.0% | |
| GTAATGTAGGAGAACTCATG+GGG | - | Chr7:69863451-69863470 | MsG0780039864.01.T01:CDS | 40.0% | |
| TGATGGTAAGAAAAACCCCA+AGG | - | Chr7:69864054-69864073 | MsG0780039864.01.T01:CDS | 40.0% | |
| TGGATGACCGAATTATACCT+AGG | - | Chr7:69864189-69864208 | MsG0780039864.01.T01:CDS | 40.0% | |
| TTCTGCATAGATGAAGGGTA+TGG | + | Chr7:69862854-69862873 | None:intergenic | 40.0% | |
| TTGGAGCTGTTGAAACACTT+TGG | - | Chr7:69863633-69863652 | MsG0780039864.01.T01:CDS | 40.0% | |
| TTTGAGCTTCGTGAATGACA+TGG | + | Chr7:69862798-69862817 | None:intergenic | 40.0% | |
| ! | GAGTATTTCTGTGGATTTGG+TGG | - | Chr7:69863528-69863547 | MsG0780039864.01.T01:CDS | 40.0% |
| ! | GCTTGTGTGCTTTGTGATTT+TGG | - | Chr7:69863096-69863115 | MsG0780039864.01.T01:CDS | 40.0% |
| ! | TCTTTGGGGAGTTATGTTGA+GGG | - | Chr7:69863360-69863379 | MsG0780039864.01.T01:CDS | 40.0% |
| ! | TTCTTTGGGGAGTTATGTTG+AGG | - | Chr7:69863359-69863378 | MsG0780039864.01.T01:CDS | 40.0% |
| !! | CATGAGCTCTAAAGATTTGG+AGG | - | Chr7:69863656-69863675 | MsG0780039864.01.T01:CDS | 40.0% |
| !! | GAAGCTTGATTTGGAGAAGA+CGG | - | Chr7:69863599-69863618 | MsG0780039864.01.T01:CDS | 40.0% |
| !! | TGAAGCGTTGAAGCTTGATT+TGG | - | Chr7:69863590-69863609 | MsG0780039864.01.T01:CDS | 40.0% |
| !! | TGGCATGAGCTCTAAAGATT+TGG | - | Chr7:69863653-69863672 | MsG0780039864.01.T01:CDS | 40.0% |
| !! | TTTGGTGTTGTGGAGGTAAT+CGG | + | Chr7:69862830-69862849 | None:intergenic | 40.0% |
| !!! | GTTTGGGAAGTTGGTTTTTG+TGG | + | Chr7:69862746-69862765 | None:intergenic | 40.0% |
| AACACACCTAACTTCTCCCA+AGG | + | Chr7:69863126-69863145 | None:intergenic | 45.0% | |
| AAGTGATCGCAATGAAGACC+GGG | - | Chr7:69863821-69863840 | MsG0780039864.01.T01:CDS | 45.0% | |
| ATCCAGCTGCTCCAAAACAT+TGG | - | Chr7:69864324-69864343 | MsG0780039864.01.T01:CDS | 45.0% | |
| CAAGTGATCGCAATGAAGAC+CGG | - | Chr7:69863820-69863839 | MsG0780039864.01.T01:CDS | 45.0% | |
| CACGTATGGAATCTGTACCT+AGG | + | Chr7:69864209-69864228 | None:intergenic | 45.0% | |
| CATACGTGGCTTACTGAAAG+GGG | - | Chr7:69864221-69864240 | MsG0780039864.01.T01:CDS | 45.0% | |
| CATGGTTTCTGTGTCTGATG+GGG | + | Chr7:69862780-69862799 | None:intergenic | 45.0% | |
| CCAAAGTTGTTCCCATTTCC+TGG | + | Chr7:69864130-69864149 | None:intergenic | 45.0% | |
| CCAGGAAATGGGAACAACTT+TGG | - | Chr7:69864127-69864146 | MsG0780039864.01.T01:CDS | 45.0% | |
| CCATACGTGGCTTACTGAAA+GGG | - | Chr7:69864220-69864239 | MsG0780039864.01.T01:CDS | 45.0% | |
| CCCATAGCTCTCATCACATT+TGG | + | Chr7:69863735-69863754 | None:intergenic | 45.0% | |
| CTAGGTACAGATTCCATACG+TGG | - | Chr7:69864207-69864226 | MsG0780039864.01.T01:CDS | 45.0% | |
| GACATGGTTTCTGTGTCTGA+TGG | + | Chr7:69862782-69862801 | None:intergenic | 45.0% | |
| GAGCTATGGGTTTGCAAGAA+TGG | - | Chr7:69863745-69863764 | MsG0780039864.01.T01:CDS | 45.0% | |
| GGGTAATGTAGGAGAACTCA+TGG | - | Chr7:69863449-69863468 | MsG0780039864.01.T01:CDS | 45.0% | |
| TCCATACGTGGCTTACTGAA+AGG | - | Chr7:69864219-69864238 | MsG0780039864.01.T01:CDS | 45.0% | |
| TTTGGAGAGGTTTGGGAAGT+TGG | + | Chr7:69862755-69862774 | None:intergenic | 45.0% | |
| ! | TCTGTGTCTGATGGGGATTT+TGG | + | Chr7:69862773-69862792 | None:intergenic | 45.0% |
| !! | AGGGTATGGATTTGGTGTTG+TGG | + | Chr7:69862840-69862859 | None:intergenic | 45.0% |
| !! | ATGGGGATTTTGGAGAGGTT+TGG | + | Chr7:69862763-69862782 | None:intergenic | 45.0% |
| !! | CTGTGGATTTGGTGGAAAGA+AGG | - | Chr7:69863536-69863555 | MsG0780039864.01.T01:CDS | 45.0% |
| !! | GTATGGATTTGGTGTTGTGG+AGG | + | Chr7:69862837-69862856 | None:intergenic | 45.0% |
| !! | TGGATTTGGTGGAAAGAAGG+AGG | - | Chr7:69863539-69863558 | MsG0780039864.01.T01:CDS | 45.0% |
| !! | TGGGGATTTTGGAGAGGTTT+GGG | + | Chr7:69862762-69862781 | None:intergenic | 45.0% |
| !! | TTGTGGTGGTGGAAAAATGG+CGG | + | Chr7:69862729-69862748 | None:intergenic | 45.0% |
| !!! | AACCAATGTTTTGGAGCAGC+TGG | + | Chr7:69864329-69864348 | None:intergenic | 45.0% |
| !!! | GAAGTTGGTTTTTGTGGTGG+TGG | + | Chr7:69862740-69862759 | None:intergenic | 45.0% |
| !!! | TGGGAAGTTGGTTTTTGTGG+TGG | + | Chr7:69862743-69862762 | None:intergenic | 45.0% |
| ATGTAGGAGAACTCATGGGG+AGG | - | Chr7:69863454-69863473 | MsG0780039864.01.T01:CDS | 50.0% | |
| CCCTTTCAGTAAGCCACGTA+TGG | + | Chr7:69864223-69864242 | None:intergenic | 50.0% | |
| GGGAACAACTTTGGACTGTC+TGG | - | Chr7:69864136-69864155 | MsG0780039864.01.T01:CDS | 50.0% | |
| GGGTTTCCTTGGGAGAAGTT+AGG | - | Chr7:69863117-69863136 | MsG0780039864.01.T01:CDS | 50.0% | |
| GTTGTGGAGGTAATCGGTGA+GGG | + | Chr7:69862824-69862843 | None:intergenic | 50.0% | |
| TGGTGGAAAGAAGGAGGAAG+TGG | - | Chr7:69863545-69863564 | MsG0780039864.01.T01:CDS | 50.0% | |
| TGTTGTGGAGGTAATCGGTG+AGG | + | Chr7:69862825-69862844 | None:intergenic | 50.0% | |
| ! | TGGGCATTATCGGTTGCTAG+CGG | - | Chr7:69863788-69863807 | MsG0780039864.01.T01:CDS | 50.0% |
| !! | GTCTGATGGGGATTTTGGAG+AGG | + | Chr7:69862768-69862787 | None:intergenic | 50.0% |
| CGGCACAAGCAGTGAGTTAC+AGG | - | Chr7:69863980-69863999 | MsG0780039864.01.T01:CDS | 55.0% | |
| GCGGTGGAGGAAGAAGAACA+TGG | + | Chr7:69862710-69862729 | None:intergenic | 55.0% | |
| TGGTGGAAAAATGGCGGTGG+AGG | + | Chr7:69862723-69862742 | None:intergenic | 55.0% | |
| !! | TGGTGGTGGAAAAATGGCGG+TGG | + | Chr7:69862726-69862745 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 69862685 | 69864382 | 69862685 | ID=MsG0780039864.01;Name=MsG0780039864.01 |
| Chr7 | mRNA | 69862685 | 69864382 | 69862685 | ID=MsG0780039864.01.T01;Parent=MsG0780039864.01;Name=MsG0780039864.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|565 |
| Chr7 | exon | 69862685 | 69864382 | 69862685 | ID=MsG0780039864.01.T01:exon:11180;Parent=MsG0780039864.01.T01 |
| Chr7 | CDS | 69862685 | 69864382 | 69862685 | ID=MsG0780039864.01.T01:cds;Parent=MsG0780039864.01.T01 |
| Chr7 | mRNA | 69862685 | 69864358 | 69862685 | ID=MsG0780039864.01.T02;Parent=MsG0780039864.01;Name=MsG0780039864.01.T02;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|557 |
| Chr7 | exon | 69862685 | 69864358 | 69862685 | ID=MsG0780039864.01.T02:exon:11181;Parent=MsG0780039864.01.T02 |
| Chr7 | CDS | 69862685 | 69864358 | 69862685 | ID=MsG0780039864.01.T02:cds;Parent=MsG0780039864.01.T02 |
| Chr7 | mRNA | 69862685 | 69863989 | 69862685 | ID=MsG0780039864.01.T03;Parent=MsG0780039864.01;Name=MsG0780039864.01.T03;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|434 |
| Chr7 | exon | 69862685 | 69863989 | 69862685 | ID=MsG0780039864.01.T03:exon:11182;Parent=MsG0780039864.01.T03 |
| Chr7 | CDS | 69862685 | 69863989 | 69862685 | ID=MsG0780039864.01.T03:cds;Parent=MsG0780039864.01.T03 |
| Gene Sequence |
| Protein sequence |
