AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019984.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019984.01.T01 MTR_0004s0130 67.614 176 25 4 1 146 354 527 2.18e-58 194
MsG0480019984.01.T01 MTR_5g065860 53.704 108 41 2 148 246 35 142 9.94e-33 117
MsG0480019984.01.T01 MTR_4g015840 55.072 69 30 1 155 222 2 70 4.04e-18 82.8
MsG0480019984.01.T01 MTR_2g014470 52.174 69 32 1 155 222 2 70 8.81e-18 81.6
MsG0480019984.01.T01 MTR_2g014480 52.174 69 32 1 155 222 2 70 5.48e-17 79.3
MsG0480019984.01.T01 MTR_2g090705 50.725 69 33 1 155 222 2 70 1.88e-16 77.8
MsG0480019984.01.T01 MTR_4g078850 47.826 69 35 1 155 222 2 70 2.10e-16 77.8
MsG0480019984.01.T01 MTR_3g108020 47.826 69 35 1 155 222 2 70 2.56e-16 77.4
MsG0480019984.01.T01 MTR_2g090360 35.625 160 61 6 17 146 353 500 2.38e-15 75.5
MsG0480019984.01.T01 MTR_2g090360 35.625 160 61 6 17 146 333 480 2.65e-15 75.1
MsG0480019984.01.T01 MTR_7g112360 56.061 66 25 2 158 219 17 82 2.31e-14 69.3
MsG0480019984.01.T01 MTR_7g101070 36.441 118 68 2 109 219 304 421 2.61e-14 72.4
MsG0480019984.01.T01 MTR_7g112360 56.061 66 25 2 158 219 17 82 4.35e-14 67.4
MsG0480019984.01.T01 MTR_5g037880 47.297 74 31 1 157 222 5 78 9.89e-13 66.6
MsG0480019984.01.T01 MTR_1g110310 43.939 66 37 0 157 222 16 81 1.45e-12 67.0
MsG0480019984.01.T01 MTR_8g022310 45.714 70 32 1 157 220 10 79 1.77e-12 65.5
MsG0480019984.01.T01 MTR_8g022310 45.714 70 32 1 157 220 10 79 1.91e-12 65.1
MsG0480019984.01.T01 MTR_8g022310 45.714 70 32 1 157 220 10 79 2.05e-12 64.7
MsG0480019984.01.T01 MTR_8g022310 43.836 73 35 1 154 220 7 79 2.16e-12 64.7
MsG0480019984.01.T01 MTR_5g035770 40.566 106 52 3 144 247 16 112 3.02e-12 66.2
MsG0480019984.01.T01 MTR_3g027580 46.970 66 35 0 157 222 89 154 1.14e-11 64.3
MsG0480019984.01.T01 MTR_3g437850 44.928 69 36 1 156 222 1 69 1.17e-11 62.0
MsG0480019984.01.T01 MTR_2g104030 40.816 98 54 2 125 222 41 134 1.19e-11 64.3
MsG0480019984.01.T01 MTR_7g109340 47.692 65 34 0 158 222 27 91 1.49e-11 63.9
MsG0480019984.01.T01 MTR_1g029460 43.662 71 40 0 152 222 1 71 4.05e-11 62.8
MsG0480019984.01.T01 MTR_4g023470 47.692 65 34 0 158 222 87 151 7.60e-11 62.0
MsG0480019984.01.T01 MTR_6g026940 36.232 69 39 1 156 219 1 69 9.16e-11 59.7
MsG0480019984.01.T01 MTR_6g027110 40.580 69 36 1 156 219 1 69 9.91e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019984.01.T01 AT5G16650 72.632 95 21 1 157 246 11 105 6.20e-44 145
MsG0480019984.01.T01 AT5G16650 72.632 95 21 1 157 246 11 105 1.83e-43 145
MsG0480019984.01.T01 AT2G33735 49.020 102 48 2 150 247 15 116 8.79e-26 98.2
MsG0480019984.01.T01 AT2G33735 49.020 102 48 2 150 247 15 116 8.79e-26 98.2
MsG0480019984.01.T01 AT3G08910 53.623 69 31 1 155 222 2 70 2.46e-18 83.2
MsG0480019984.01.T01 AT4G28480 53.623 69 31 1 155 222 2 70 4.53e-18 82.0
MsG0480019984.01.T01 AT4G28480 53.623 69 31 1 155 222 2 70 8.35e-18 82.0
MsG0480019984.01.T01 AT5G25530 52.174 69 32 1 155 222 2 70 1.08e-17 81.6
MsG0480019984.01.T01 AT5G01390 50.725 69 33 1 155 222 2 70 1.54e-17 79.7
MsG0480019984.01.T01 AT5G01390 50.725 69 33 1 155 222 2 70 1.79e-17 79.3
MsG0480019984.01.T01 AT5G01390 50.725 69 33 1 155 222 2 70 3.56e-17 79.3
MsG0480019984.01.T01 AT5G01390 50.725 69 33 1 155 222 2 70 5.15e-17 79.3
MsG0480019984.01.T01 AT2G20560 50.725 69 33 1 155 222 2 70 1.25e-16 78.6
MsG0480019984.01.T01 AT3G47940 52.113 71 30 2 155 222 2 71 2.51e-16 77.8
MsG0480019984.01.T01 AT1G59725 52.857 70 31 1 155 222 2 71 2.91e-16 77.4
MsG0480019984.01.T01 AT1G10350 49.275 69 34 1 155 222 2 70 3.67e-16 77.4
MsG0480019984.01.T01 AT5G25530 46.753 77 32 2 155 222 2 78 4.56e-15 73.9
MsG0480019984.01.T01 AT3G62600 51.471 68 33 0 155 222 24 91 1.56e-13 69.7
MsG0480019984.01.T01 AT1G56300 47.761 67 31 1 158 220 14 80 1.87e-13 66.6
MsG0480019984.01.T01 AT1G56300 47.761 67 31 1 158 220 14 80 2.42e-13 65.5
MsG0480019984.01.T01 AT1G59980 49.231 65 33 0 159 223 25 89 4.10e-13 68.6
MsG0480019984.01.T01 AT1G59980 41.573 89 49 1 159 247 25 110 4.49e-13 68.6
MsG0480019984.01.T01 AT3G08970 47.143 70 36 1 153 222 23 91 1.91e-12 67.0
MsG0480019984.01.T01 AT3G08970 47.143 70 36 1 153 222 23 91 1.91e-12 67.0
MsG0480019984.01.T01 AT1G24120 44.595 74 39 1 157 228 20 93 3.58e-12 65.9
MsG0480019984.01.T01 AT1G72416 47.826 69 29 2 157 220 5 71 6.86e-12 63.2
MsG0480019984.01.T01 AT1G72416 47.826 69 29 2 157 220 5 71 7.17e-12 62.8
MsG0480019984.01.T01 AT1G68370 45.455 66 36 0 157 222 17 82 7.92e-12 65.1
MsG0480019984.01.T01 AT1G72416 48.000 75 31 3 157 226 5 76 1.12e-11 62.8
MsG0480019984.01.T01 AT5G48030 43.056 72 41 0 151 222 88 159 1.44e-11 64.3
MsG0480019984.01.T01 AT5G06910 43.662 71 40 0 159 229 31 101 1.44e-11 63.5
MsG0480019984.01.T01 AT1G72416 47.826 69 29 2 157 220 5 71 1.52e-11 62.0
MsG0480019984.01.T01 AT1G80030 43.590 78 43 1 145 222 63 139 1.54e-11 64.3
MsG0480019984.01.T01 AT1G80030 42.169 83 47 1 140 222 58 139 1.85e-11 63.9
MsG0480019984.01.T01 AT1G80030 42.169 83 47 1 140 222 58 139 1.85e-11 63.9
MsG0480019984.01.T01 AT1G80030 42.169 83 47 1 140 222 58 139 1.85e-11 63.9
MsG0480019984.01.T01 AT3G17830 41.250 80 46 1 143 222 49 127 5.08e-11 62.8
MsG0480019984.01.T01 AT1G28210 33.645 107 59 2 125 219 4 110 7.70e-11 62.0
MsG0480019984.01.T01 AT1G28210 33.645 107 59 2 125 219 4 110 7.87e-11 62.0
MsG0480019984.01.T01 AT1G28210 33.645 107 59 2 125 219 4 110 8.39e-11 62.0

Find 104 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCAACCAGGCGACGTTTA+TGG 0.173453 4:+31182689 MsG0480019984.01.T01:CDS
GAATATCTTGCCAGATTTAA+AGG 0.217001 4:+31188247 MsG0480019984.01.T01:intron
TTGCTGGGGTGGAGGCTGTT+GGG 0.274705 4:-31182648 None:intergenic
TTCACCCTGACCACCCTCTC+TGG 0.280310 4:-31183063 None:intergenic
CGTTTAGACTATGATTTAAC+TGG 0.281624 4:+31188084 MsG0480019984.01.T01:CDS
CCCATGCAAATGCCATATTC+AGG 0.288983 4:+31182554 None:intergenic
GATTCCATGCAATATGGATA+TGG 0.318852 4:+31182605 MsG0480019984.01.T01:CDS
GTCCACTCTCCTCCATCCTT+TGG 0.332598 4:-31182983 None:intergenic
TGGCCCCAGAGAGGGTGGTC+AGG 0.348959 4:+31183058 MsG0480019984.01.T01:CDS
AAATGAGAGGGTTGGGGTGG+TGG 0.351350 4:-31182799 None:intergenic
GGAATGAGCCCTTGATTTGC+TGG 0.360232 4:-31182664 None:intergenic
AAGAACAGAGTTGAAATCTA+TGG 0.362354 4:-31183009 None:intergenic
GGTTGCGGAACCCCTGAATA+TGG 0.362733 4:-31182566 None:intergenic
GGATTTCGAACCAGGAGATT+GGG 0.368121 4:-31182865 None:intergenic
CGTGCTGATTCCATGCAATA+TGG 0.370661 4:+31182599 MsG0480019984.01.T01:CDS
TTGAGCAAAATGAGAGGGTT+GGG 0.373583 4:-31182806 None:intergenic
TTTGCTGGGGTGGAGGCTGT+TGG 0.378473 4:-31182649 None:intergenic
CAGGAGGAGGAGGGAGTGCC+GGG 0.383156 4:-31182727 None:intergenic
TGCTGGGGTGGAGGCTGTTG+GGG 0.389724 4:-31182647 None:intergenic
CCCTTGATTTGCTGGGGTGG+AGG 0.395889 4:-31182656 None:intergenic
GCTGATACCAAGTCCATTGC+AGG 0.398317 4:-31188281 None:intergenic
AGGATTTCGAACCAGGAGAT+TGG 0.399658 4:-31182866 None:intergenic
TCCATAAACGTCGCCTGGTT+GGG 0.406727 4:-31182690 None:intergenic
GTGTCATCTTTGTGTTTGTC+AGG 0.409911 4:-31186111 None:intergenic
TTCTGAAGGGAAGCACTTGT+TGG 0.411788 4:-31182841 None:intergenic
CCAGGAGGAGGAGGGAGTGC+CGG 0.419098 4:-31182728 None:intergenic
TCACCCTGACCACCCTCTCT+GGG 0.420780 4:-31183062 None:intergenic
GAGGAGGAGGGAGTGCCGGG+TGG 0.428183 4:-31182724 None:intergenic
AATCGAGAAGTATAGCTTGC+AGG 0.438261 4:+31188115 MsG0480019984.01.T01:CDS
TATGATGGTGGTGAGGGAGG+AGG 0.440585 4:+31182767 MsG0480019984.01.T01:CDS
CCTTCAGAACCCCAATCTCC+TGG 0.441034 4:+31182855 MsG0480019984.01.T01:CDS
GGCTCTGTTGGCCCCAGAGA+GGG 0.443183 4:+31183050 MsG0480019984.01.T01:CDS
ATTCCATGCAATATGGATAT+GGG 0.452854 4:+31182606 MsG0480019984.01.T01:CDS
GTCCATAAACGTCGCCTGGT+TGG 0.456918 4:-31182691 None:intergenic
GGCCCCAGAGAGGGTGGTCA+GGG 0.461150 4:+31183059 MsG0480019984.01.T01:CDS
AGTGCCGGGTGGGTCCCGCT+AGG 0.464038 4:-31182713 None:intergenic
CAAGGATTATTACAAAGTGC+TGG 0.468523 4:+31185938 MsG0480019984.01.T01:intron
ATTTCAACTCTGTTCTTGAC+AGG 0.469232 4:+31183015 MsG0480019984.01.T01:CDS
TAACAACCAGGGCGAGTCTT+CGG 0.470347 4:-31186004 None:intergenic
CCGGCACTCCCTCCTCCTCC+TGG 0.473559 4:+31182728 MsG0480019984.01.T01:CDS
GCCTCCACCCCAGCAAATCA+AGG 0.474531 4:+31182655 MsG0480019984.01.T01:CDS
GAATCAGCACGGCTGGATCC+TGG 0.476142 4:-31182587 None:intergenic
GCACGGCTGGATCCTGGTTG+CGG 0.489911 4:-31182581 None:intergenic
CCAGGAGATTGGGGTTCTGA+AGG 0.492059 4:-31182855 None:intergenic
TTGCATGGAATCAGCACGGC+TGG 0.493984 4:-31182594 None:intergenic
TTGAATGTGCATGGCTCTGT+TGG 0.502696 4:+31183038 MsG0480019984.01.T01:CDS
TCATAGTCTAAACGCTTGGC+AGG 0.503224 4:-31188075 None:intergenic
CCATGCAAATGCCATATTCA+GGG 0.504128 4:+31182555 None:intergenic
CTAGGTCCATAAACGTCGCC+TGG 0.509683 4:-31182695 None:intergenic
GGCTCATTCCCTTCCCAACC+AGG 0.515897 4:+31182677 MsG0480019984.01.T01:CDS
TGAAGGGAAGCACTTGTTGG+AGG 0.516431 4:-31182838 None:intergenic
ATTCTGACCTGCAATGGACT+TGG 0.516464 4:+31188274 MsG0480019984.01.T01:CDS
TATGCATTACCAGGAGGAGG+AGG 0.517422 4:-31182737 None:intergenic
AGGAGGAGGGAGTGCCGGGT+GGG 0.529815 4:-31182723 None:intergenic
GGAATGATTCTGACCTGCAA+TGG 0.534867 4:+31188268 MsG0480019984.01.T01:CDS
TCTGTTGGCCCCAGAGAGGG+TGG 0.536422 4:+31183053 MsG0480019984.01.T01:CDS
TAAATCATAGTCTAAACGCT+TGG 0.542195 4:-31188079 None:intergenic
CTTGACAGGTTGAATGTGCA+TGG 0.547992 4:+31183029 MsG0480019984.01.T01:CDS
ATTGAGCAAAATGAGAGGGT+TGG 0.550179 4:-31182807 None:intergenic
AACAGTAAATGACAATTCCA+CGG 0.550242 4:-31183103 None:intergenic
TAAACGTCGCCTGGTTGGGA+AGG 0.551135 4:-31182686 None:intergenic
TGGACCTAGCGGGACCCACC+CGG 0.554292 4:+31182709 MsG0480019984.01.T01:CDS
ATGATGGTGGTGAGGGAGGA+GGG 0.556678 4:+31182768 MsG0480019984.01.T01:CDS
ATGTATGATGGTGGTGAGGG+AGG 0.558345 4:+31182764 MsG0480019984.01.T01:CDS
TGAGCAAAATGAGAGGGTTG+GGG 0.559278 4:-31182805 None:intergenic
TATTCAGGGGTTCCGCAACC+AGG 0.561692 4:+31182569 MsG0480019984.01.T01:CDS
GAATGAGCCCTTGATTTGCT+GGG 0.564737 4:-31182663 None:intergenic
GAGCCCTTGATTTGCTGGGG+TGG 0.568275 4:-31182659 None:intergenic
AATGAGCCCTTGATTTGCTG+GGG 0.569260 4:-31182662 None:intergenic
GATTTCGAACCAGGAGATTG+GGG 0.569357 4:-31182864 None:intergenic
AAATTACCGAAGACTCGCCC+TGG 0.569641 4:+31185998 MsG0480019984.01.T01:CDS
GTTTAGACTATGATTTAACT+GGG 0.572670 4:+31188085 MsG0480019984.01.T01:CDS
CCTCCACCCCAGCAAATCAA+GGG 0.574658 4:+31182656 MsG0480019984.01.T01:CDS
CTACAACTTAACTTTGTCCG+TGG 0.575777 4:+31183086 MsG0480019984.01.T01:CDS
TTCCATGCAATATGGATATG+GGG 0.578962 4:+31182607 MsG0480019984.01.T01:CDS
ATGATGTATGATGGTGGTGA+GGG 0.582197 4:+31182761 MsG0480019984.01.T01:CDS
ATATATGCATTACCAGGAGG+AGG 0.582553 4:-31182740 None:intergenic
AAACGTCGCCTGGTTGGGAA+GGG 0.585185 4:-31182685 None:intergenic
ATGTGGCGAGCGTGATCCAA+AGG 0.586438 4:+31182967 MsG0480019984.01.T01:CDS
CACCCTGACCACCCTCTCTG+GGG 0.588226 4:-31183061 None:intergenic
TTTGGATCACGCTCGCCACA+TGG 0.590732 4:-31182965 None:intergenic
GGCGAGCGTGATCCAAAGGA+TGG 0.594244 4:+31182971 MsG0480019984.01.T01:CDS
AATGCATATATGATGTATGA+TGG 0.595623 4:+31182752 MsG0480019984.01.T01:CDS
CAGGAGATTGGGGTTCTGAA+GGG 0.596968 4:-31182854 None:intergenic
ATCCAAAGGATGGAGGAGAG+TGG 0.602183 4:+31182981 MsG0480019984.01.T01:CDS
GCAAAATGAGAGGGTTGGGG+TGG 0.605890 4:-31182802 None:intergenic
TACATCATATATGCATTACC+AGG 0.614005 4:-31182746 None:intergenic
TCCATGCAATATGGATATGG+GGG 0.614348 4:+31182608 MsG0480019984.01.T01:CDS
TATGATGTATGATGGTGGTG+AGG 0.615379 4:+31182760 MsG0480019984.01.T01:CDS
GTATCAGCAATGAAGACAGA+TGG 0.616565 4:+31188296 MsG0480019984.01.T01:CDS
TGGCTCTGTTGGCCCCAGAG+AGG 0.624265 4:+31183049 MsG0480019984.01.T01:CDS
CCAGATTGAGCAAAATGAGA+GGG 0.629994 4:-31182811 None:intergenic
GAGCGTGATCCAAAGGATGG+AGG 0.630922 4:+31182974 MsG0480019984.01.T01:CDS
GAGATAAATGAAGCTTACAA+TGG 0.631266 4:+31186156 MsG0480019984.01.T01:CDS
CATGCAAATGCCATATTCAG+GGG 0.635117 4:+31182556 None:intergenic
GCGACGTTTATGGACCTAGC+GGG 0.637306 4:+31182699 MsG0480019984.01.T01:CDS
ATGCATTACCAGGAGGAGGA+GGG 0.642132 4:-31182736 None:intergenic
GGGATTCAGGGGTGACCATG+TGG 0.652748 4:+31182950 MsG0480019984.01.T01:intron
TCCAGATTGAGCAAAATGAG+AGG 0.654697 4:-31182812 None:intergenic
CATATTGCATGGAATCAGCA+CGG 0.659701 4:-31182598 None:intergenic
GCATATATGATGTATGATGG+TGG 0.669589 4:+31182755 MsG0480019984.01.T01:CDS
TTTAGACTATGATTTAACTG+GGG 0.692548 4:+31188086 MsG0480019984.01.T01:CDS
ATCATATATGCATTACCAGG+AGG 0.699211 4:-31182743 None:intergenic
GGCGACGTTTATGGACCTAG+CGG 0.755640 4:+31182698 MsG0480019984.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTATTATTTTAAAAAA+AGG - Chr4:31185124-31185143 None:intergenic 0.0%
!!! AAAAAATTTTAGGAATTTAT+CGG - Chr4:31185336-31185355 None:intergenic 10.0%
!!! ATAATTTACACTTTTTTAAT+AGG + Chr4:31183319-31183338 MsG0480019984.01.T01:intron 10.0%
!!! ATACAACAAAATATTTTTTT+TGG + Chr4:31183994-31184013 MsG0480019984.01.T01:intron 10.0%
!!! CTATTAATAATTTTCATATA+AGG - Chr4:31186858-31186877 None:intergenic 10.0%
!!! TATTATTACTTAAATTTTTC+TGG + Chr4:31188159-31188178 MsG0480019984.01.T01:intron 10.0%
!!! TGATTAATTTTTTATATTTC+CGG + Chr4:31183787-31183806 MsG0480019984.01.T01:intron 10.0%
!! AAAAACTAACATCTTTATAT+AGG + Chr4:31185057-31185076 MsG0480019984.01.T01:intron 15.0%
!! AATAACTAAAAATAATACCT+TGG - Chr4:31185863-31185882 None:intergenic 15.0%
!! ACAATAAATAAGTATATTCA+AGG - Chr4:31186794-31186813 None:intergenic 15.0%
!! ATAACTAAAAATAATACCTT+GGG - Chr4:31185862-31185881 None:intergenic 15.0%
!! ATTTCATATAAAACTAATGA+AGG - Chr4:31187093-31187112 None:intergenic 15.0%
!! TTAAACAATATAGTAAAAGT+AGG - Chr4:31187149-31187168 None:intergenic 15.0%
!!! AAATAGTTTTCTAATAATGA+TGG - Chr4:31184654-31184673 None:intergenic 15.0%
!!! AATCTAAATCTTTTTTTTAC+AGG + Chr4:31186530-31186549 MsG0480019984.01.T01:intron 15.0%
!!! ATAAGTAAATGTTCATTTTA+AGG - Chr4:31187665-31187684 None:intergenic 15.0%
!!! ATAGATAAATTTGTTTGTAA+AGG - Chr4:31184681-31184700 None:intergenic 15.0%
!!! ATCTAAATCTTTTTTTTACA+GGG + Chr4:31186531-31186550 MsG0480019984.01.T01:intron 15.0%
!!! ATTTTAAAATAAACCCTATT+TGG + Chr4:31183963-31183982 MsG0480019984.01.T01:intron 15.0%
!!! ATTTTTAGCCTATTAATTTT+TGG + Chr4:31183738-31183757 MsG0480019984.01.T01:intron 15.0%
!!! CTAAATCTTTTTTTTTTACA+GGG - Chr4:31186284-31186303 None:intergenic 15.0%
!!! TCTAAATCTTTTTTTTTTAC+AGG - Chr4:31186285-31186304 None:intergenic 15.0%
!!! TGAAATTTTTACTTATTTCA+AGG + Chr4:31185920-31185939 MsG0480019984.01.T01:intron 15.0%
!!! TTACATGTTTTTTAAAACTA+CGG - Chr4:31185155-31185174 None:intergenic 15.0%
!! AAAAGAATGTAATAAACCTA+AGG + Chr4:31185188-31185207 MsG0480019984.01.T01:intron 20.0%
!! AGAATTAATAGAATCACAAA+AGG - Chr4:31184712-31184731 None:intergenic 20.0%
!! GGAATAATAACATCAAATTA+AGG + Chr4:31185264-31185283 MsG0480019984.01.T01:intron 20.0%
!! TGAAAAAAGGATAAAAGAAA+AGG - Chr4:31184741-31184760 None:intergenic 20.0%
!!! CAAAGATTGATTTTTACATA+CGG - Chr4:31183200-31183219 None:intergenic 20.0%
!!! CTTTTTATTATTCTTAGACA+AGG + Chr4:31184444-31184463 MsG0480019984.01.T01:intron 20.0%
!!! GACTAAATTTTTTCTTTCTT+TGG + Chr4:31183813-31183832 MsG0480019984.01.T01:intron 20.0%
!!! GAGGAAAGTTAAAAAATTTT+AGG - Chr4:31185346-31185365 None:intergenic 20.0%
!!! TAATTTTTTATATTTCCGGT+TGG + Chr4:31183791-31183810 MsG0480019984.01.T01:intron 20.0%
!!! TTTTAAACAACCATTTCTTA+TGG - Chr4:31183659-31183678 None:intergenic 20.0%
! AAAAAAAGTGAGAAGAATTG+AGG - Chr4:31185695-31185714 None:intergenic 25.0%
! AAATCAAAGACAAATAGTTG+AGG - Chr4:31185729-31185748 None:intergenic 25.0%
! AAGAAAAAATTTAGTCCAAC+CGG - Chr4:31183809-31183828 None:intergenic 25.0%
! AAGTTTAGATGAACTAAAGA+TGG + Chr4:31187254-31187273 MsG0480019984.01.T01:intron 25.0%
! AATGCATATATGATGTATGA+TGG + Chr4:31182752-31182771 MsG0480019984.01.T01:CDS 25.0%
! ACAATGAGTGATTGAAAAAA+TGG + Chr4:31182920-31182939 MsG0480019984.01.T01:intron 25.0%
! ACTTCATTATTCTAACTTTG+CGG + Chr4:31186190-31186209 MsG0480019984.01.T01:intron 25.0%
! ATAAAATTACAGTCAAACGA+CGG + Chr4:31185550-31185569 MsG0480019984.01.T01:intron 25.0%
! ATATAGTAAAAGTAGGAACT+AGG - Chr4:31187142-31187161 None:intergenic 25.0%
! ATCTTAAAGAGAGAAGAAAA+AGG - Chr4:31184872-31184891 None:intergenic 25.0%
! ATGATTCGAAGATATGAAAT+TGG + Chr4:31184028-31184047 MsG0480019984.01.T01:intron 25.0%
! ATTGAAAAAATGGTGAACAT+GGG + Chr4:31182930-31182949 MsG0480019984.01.T01:intron 25.0%
! CAACAAAGCCAAAAATTAAT+AGG - Chr4:31183749-31183768 None:intergenic 25.0%
! CTTTCAAAATATTAGACCTT+AGG - Chr4:31185207-31185226 None:intergenic 25.0%
! GAAAATAAGACCATAAGAAA+TGG + Chr4:31183646-31183665 MsG0480019984.01.T01:intron 25.0%
! GAACAACGATAAATAATTGT+AGG - Chr4:31186606-31186625 None:intergenic 25.0%
! GACTACTCATTACATATTTA+AGG + Chr4:31186975-31186994 MsG0480019984.01.T01:intron 25.0%
! GCTAAAACAGTAAATGTATA+GGG - Chr4:31187743-31187762 None:intergenic 25.0%
! GCTGTTCAAACTTAATAAAT+AGG + Chr4:31187845-31187864 MsG0480019984.01.T01:intron 25.0%
! GTCTAAAAGCAAAAAAGAAT+AGG - Chr4:31186031-31186050 None:intergenic 25.0%
! GTTGAAATCAATTTGATTGA+AGG - Chr4:31185374-31185393 None:intergenic 25.0%
! GTTTAGACTATGATTTAACT+GGG + Chr4:31188085-31188104 MsG0480019984.01.T01:CDS 25.0%
! TAAACTTACACGTTACTATT+AGG - Chr4:31187241-31187260 None:intergenic 25.0%
! TACATAGTTAAAGATGCATA+TGG - Chr4:31183456-31183475 None:intergenic 25.0%
! TAGCGTATAACAAAATAGAA+AGG - Chr4:31184925-31184944 None:intergenic 25.0%
! TATCTATATGTCAAACAGAA+AGG - Chr4:31187371-31187390 None:intergenic 25.0%
! TATGAAATTATGTGAACATC+AGG - Chr4:31187196-31187215 None:intergenic 25.0%
! TATTAAGTTTGAACAGCAAA+TGG - Chr4:31187842-31187861 None:intergenic 25.0%
! TCTTAAAGAGAGAAGAAAAA+GGG - Chr4:31184871-31184890 None:intergenic 25.0%
! TGGAAGAATATGAAATTACA+GGG + Chr4:31186503-31186522 MsG0480019984.01.T01:intron 25.0%
! TGTATCAAAGAAACCAAATA+GGG - Chr4:31183979-31183998 None:intergenic 25.0%
! TTAAAAAAGAGAAGAGTCTA+AGG - Chr4:31184079-31184098 None:intergenic 25.0%
! TTGTATCAAAGAAACCAAAT+AGG - Chr4:31183980-31183999 None:intergenic 25.0%
! TTTAGACTATGATTTAACTG+GGG + Chr4:31188086-31188105 MsG0480019984.01.T01:CDS 25.0%
! TTTATCGTTGTTCTTGAAAA+TGG + Chr4:31186613-31186632 MsG0480019984.01.T01:intron 25.0%
! TTTCTATTTAATTGTCGTCA+TGG - Chr4:31185528-31185547 None:intergenic 25.0%
!! AAAAGAGCTTATAGTCATTT+TGG + Chr4:31186636-31186655 MsG0480019984.01.T01:intron 25.0%
!! AGTAATATTACGCGATTTTT+AGG - Chr4:31187332-31187351 None:intergenic 25.0%
!! ATTTCAGATTCTTCTACTTT+TGG + Chr4:31186318-31186337 MsG0480019984.01.T01:intron 25.0%
!! ATTTCATATTCTTCCACTTT+TGG - Chr4:31186499-31186518 None:intergenic 25.0%
!! CAAATCATCGTAAGTTTTTA+TGG - Chr4:31184148-31184167 None:intergenic 25.0%
!! TAAATTTTAAACAAGCACGT+AGG + Chr4:31183280-31183299 MsG0480019984.01.T01:intron 25.0%
!! TAGAAGAATCTGAAATTACA+GGG - Chr4:31186314-31186333 None:intergenic 25.0%
!! TTTGTTATGGTTTGGAAAAA+TGG + Chr4:31187971-31187990 MsG0480019984.01.T01:intron 25.0%
!!! ACAGTGTTGAACTTATTTTT+GGG + Chr4:31184944-31184963 MsG0480019984.01.T01:intron 25.0%
!!! ACTCTTCTCTTTTTTAACTA+AGG + Chr4:31184082-31184101 MsG0480019984.01.T01:intron 25.0%
!!! ATAGCAAGAGTTTTTTTCAT+TGG - Chr4:31187020-31187039 None:intergenic 25.0%
!!! CTCTTCTCTTTTTTAACTAA+GGG + Chr4:31184083-31184102 MsG0480019984.01.T01:intron 25.0%
!!! GGAATAAAAGTTTTATGTAG+TGG + Chr4:31183161-31183180 MsG0480019984.01.T01:intron 25.0%
!!! TAATTTTTGGCTTTGTTGTT+GGG + Chr4:31183751-31183770 MsG0480019984.01.T01:intron 25.0%
!!! TACAGTGTTGAACTTATTTT+TGG + Chr4:31184943-31184962 MsG0480019984.01.T01:intron 25.0%
!!! TAGCAAGAGTTTTTTTCATT+GGG - Chr4:31187019-31187038 None:intergenic 25.0%
!!! TTAATTTTTGGCTTTGTTGT+TGG + Chr4:31183750-31183769 MsG0480019984.01.T01:intron 25.0%
!!! TTTTTCAATCACTCATTGTA+AGG - Chr4:31182919-31182938 None:intergenic 25.0%
AAAAACTCAATCTCGCATAT+TGG - Chr4:31183893-31183912 None:intergenic 30.0%
AAAAGAATAGGTTAACAACC+AGG - Chr4:31186019-31186038 None:intergenic 30.0%
AAAGAATAGGTTAACAACCA+GGG - Chr4:31186018-31186037 None:intergenic 30.0%
AAAGTCACACAATCTAATGA+GGG - Chr4:31187639-31187658 None:intergenic 30.0%
AAATTACAAGGACCAAAAGT+GGG - Chr4:31186403-31186422 None:intergenic 30.0%
AACAGTAAATGACAATTCCA+CGG - Chr4:31183106-31183125 None:intergenic 30.0%
AACCTTATCATTGTCATTGA+TGG + Chr4:31184569-31184588 MsG0480019984.01.T01:intron 30.0%
AAGAACAGAGTTGAAATCTA+TGG - Chr4:31183012-31183031 None:intergenic 30.0%
AATATTACAAGGACGAAAAG+AGG - Chr4:31186242-31186261 None:intergenic 30.0%
AATCAATTTGATTGAAGGAG+TGG - Chr4:31185369-31185388 None:intergenic 30.0%
AATCTAGTAATGTTAGATGG+AGG - Chr4:31184198-31184217 None:intergenic 30.0%
AATGAAGACAGATGGTATTA+GGG + Chr4:31188304-31188323 MsG0480019984.01.T01:CDS 30.0%
ACACAATCACAATCTAGAAA+TGG + Chr4:31187045-31187064 MsG0480019984.01.T01:intron 30.0%
ACCTTATCATTGTCATTGAT+GGG + Chr4:31184570-31184589 MsG0480019984.01.T01:intron 30.0%
AGCTAAAGTTGACCATTATT+CGG + Chr4:31187428-31187447 MsG0480019984.01.T01:intron 30.0%
ATCAATGACAATGATAAGGT+TGG - Chr4:31184570-31184589 None:intergenic 30.0%
ATCAATTTGATTGAAGGAGT+GGG - Chr4:31185368-31185387 None:intergenic 30.0%
ATCTAGTAATGTTAGATGGA+GGG - Chr4:31184197-31184216 None:intergenic 30.0%
ATTCCATGCAATATGGATAT+GGG + Chr4:31182606-31182625 MsG0480019984.01.T01:CDS 30.0%
CACATCTTGTTCAAATTATG+TGG - Chr4:31187939-31187958 None:intergenic 30.0%
CAGAATCATTCCTTTAAATC+TGG - Chr4:31188260-31188279 None:intergenic 30.0%
CGTTTAGACTATGATTTAAC+TGG + Chr4:31188084-31188103 MsG0480019984.01.T01:CDS 30.0%
CTAGAAATGGTTAGATTAGA+AGG + Chr4:31187058-31187077 MsG0480019984.01.T01:intron 30.0%
CTAGAAGTAATTTCCATTAC+AGG - Chr4:31187535-31187554 None:intergenic 30.0%
CTCAATCTAGTAATGTTAGA+TGG - Chr4:31184201-31184220 None:intergenic 30.0%
CTTGTAATATTAGCGAATTC+CGG + Chr4:31186251-31186270 MsG0480019984.01.T01:intron 30.0%
GAATATCTTGCCAGATTTAA+AGG + Chr4:31188247-31188266 MsG0480019984.01.T01:intron 30.0%
GAGATAAATGAAGCTTACAA+TGG + Chr4:31186156-31186175 MsG0480019984.01.T01:CDS 30.0%
GATACATTGAAAGACTATTG+TGG - Chr4:31186683-31186702 None:intergenic 30.0%
GATTGAAAAAATGGTGAACA+TGG + Chr4:31182929-31182948 MsG0480019984.01.T01:intron 30.0%
GGCTAAAACAGTAAATGTAT+AGG - Chr4:31187744-31187763 None:intergenic 30.0%
GTGGAAGAATATGAAATTAC+AGG + Chr4:31186502-31186521 MsG0480019984.01.T01:intron 30.0%
TAAAGTCACACAATCTAATG+AGG - Chr4:31187640-31187659 None:intergenic 30.0%
TAAATCATAGTCTAAACGCT+TGG - Chr4:31188082-31188101 None:intergenic 30.0%
TACATCATATATGCATTACC+AGG - Chr4:31182749-31182768 None:intergenic 30.0%
TACTCATGATTCTACTTCAT+TGG + Chr4:31186076-31186095 MsG0480019984.01.T01:intron 30.0%
TGATGAGTGCTTCAATTTAT+AGG + Chr4:31187462-31187481 MsG0480019984.01.T01:intron 30.0%
TGTACAATTTCTATAGCATG+AGG - Chr4:31183719-31183738 None:intergenic 30.0%
TTAACTAAGGGATATAGCTA+GGG + Chr4:31184095-31184114 MsG0480019984.01.T01:intron 30.0%
TTCCAAAACGACATTGAAAA+AGG - Chr4:31185248-31185267 None:intergenic 30.0%
TTCGAAGATATGAAATTGGA+AGG + Chr4:31184032-31184051 MsG0480019984.01.T01:intron 30.0%
TTCTACTTCATTGGTAGAAA+TGG + Chr4:31186085-31186104 MsG0480019984.01.T01:intron 30.0%
TTTAACTAAGGGATATAGCT+AGG + Chr4:31184094-31184113 MsG0480019984.01.T01:intron 30.0%
TTTATCTTATAATGTTGCCG+CGG - Chr4:31184781-31184800 None:intergenic 30.0%
TTTGTTAATCCTTCGATTCT+CGG - Chr4:31185037-31185056 None:intergenic 30.0%
! AATGTTTGGTTTCCGAAAAA+TGG - Chr4:31187502-31187521 None:intergenic 30.0%
! AATTTCAGATTCCTCACTTT+TGG + Chr4:31186418-31186437 MsG0480019984.01.T01:intron 30.0%
! ATCGTAAGTTTTTATGGACT+TGG - Chr4:31184142-31184161 None:intergenic 30.0%
! ATTATGTGGTGCTAATTATG+TGG - Chr4:31187925-31187944 None:intergenic 30.0%
! ATTGATGATTTGTCCTGTAA+TGG + Chr4:31187519-31187538 MsG0480019984.01.T01:intron 30.0%
! GTAGAAGAATCTGAAATTAC+AGG - Chr4:31186315-31186334 None:intergenic 30.0%
! GTTGGTTTACTCTAAACATA+TGG - Chr4:31184552-31184571 None:intergenic 30.0%
! TTTGAACAAGATGTGTGTTT+TGG + Chr4:31187944-31187963 MsG0480019984.01.T01:intron 30.0%
!! ATGCATTTGGTAGTGAAAAA+AGG - Chr4:31184754-31184773 None:intergenic 30.0%
!! ATGGTTTTCTTGTTTGTTGA+TGG - Chr4:31183916-31183935 None:intergenic 30.0%
!! TAGACTTTTCTAGTCTTCAT+GGG + Chr4:31183515-31183534 MsG0480019984.01.T01:intron 30.0%
!!! AATTTTTGGCTTTGTTGTTG+GGG + Chr4:31183752-31183771 MsG0480019984.01.T01:intron 30.0%
!!! ACCTTTGTTGTCTAGTTTTT+CGG + Chr4:31187116-31187135 MsG0480019984.01.T01:intron 30.0%
!!! AGCAAGAGTTTTTTTCATTG+GGG - Chr4:31187018-31187037 None:intergenic 30.0%
!!! AGTGTTGAACTTATTTTTGG+GGG + Chr4:31184946-31184965 MsG0480019984.01.T01:intron 30.0%
!!! CAGTGTTGAACTTATTTTTG+GGG + Chr4:31184945-31184964 MsG0480019984.01.T01:intron 30.0%
!!! TTCCTTTTTCAATGTCGTTT+TGG + Chr4:31185243-31185262 MsG0480019984.01.T01:intron 30.0%
!!! TTTGTTTTTGTTGTTGTCAG+TGG - Chr4:31185839-31185858 None:intergenic 30.0%
!!! TTTTTTAATGATATCCACCC+TGG + Chr4:31183369-31183388 MsG0480019984.01.T01:intron 30.0%
!!! TTTTTTACAGGGACTAAAAC+CGG - Chr4:31186561-31186542 None:intergenic 30.0%
AAAACCATTAGTTGTGAGCA+TGG + Chr4:31183928-31183947 MsG0480019984.01.T01:intron 35.0%
AAAATAGGTCCTTGCAATCA+AGG - Chr4:31185011-31185030 None:intergenic 35.0%
AATGTCGGATTTCCGAATAA+TGG - Chr4:31187443-31187462 None:intergenic 35.0%
ACAAACAGAGTGCATTATCT+GGG + Chr4:31186918-31186937 MsG0480019984.01.T01:intron 35.0%
ACATTGAAAAAGGAACAGAG+AGG - Chr4:31185238-31185257 None:intergenic 35.0%
ACTTAACGAAGTGCACAATA+AGG - Chr4:31186722-31186741 None:intergenic 35.0%
AGCCATAAGGTAGAATAAAG+GGG - Chr4:31185815-31185834 None:intergenic 35.0%
ATACATGGCACGTAAAATGA+GGG - Chr4:31186445-31186464 None:intergenic 35.0%
ATCATATATGCATTACCAGG+AGG - Chr4:31182746-31182765 None:intergenic 35.0%
ATTTCAACTCTGTTCTTGAC+AGG + Chr4:31183015-31183034 MsG0480019984.01.T01:CDS 35.0%
CAAAAAGTTGCTTCGTTCTT+TGG + Chr4:31184270-31184289 MsG0480019984.01.T01:intron 35.0%
CAACAACAAAAACAAACCCA+AGG + Chr4:31185843-31185862 MsG0480019984.01.T01:intron 35.0%
CAAGGATTATTACAAAGTGC+TGG + Chr4:31185938-31185957 MsG0480019984.01.T01:intron 35.0%
CAATGAAGACAGATGGTATT+AGG + Chr4:31188303-31188322 MsG0480019984.01.T01:CDS 35.0%
CAGCCATAAGGTAGAATAAA+GGG - Chr4:31185816-31185835 None:intergenic 35.0%
CAGGACAAATCATCAATGTT+TGG - Chr4:31187516-31187535 None:intergenic 35.0%
CATTGAAAAAGGAACAGAGA+GGG - Chr4:31185237-31185256 None:intergenic 35.0%
CGGAATTCGCTAATATTACA+AGG - Chr4:31186253-31186272 None:intergenic 35.0%
CGGATGAACCTTACAATTAT+GGG + Chr4:31186210-31186229 MsG0480019984.01.T01:intron 35.0%
CTCAAACTAGAGGAATACAT+AGG + Chr4:31184337-31184356 MsG0480019984.01.T01:intron 35.0%
CTTAACGAAGTGCACAATAA+GGG - Chr4:31186721-31186740 None:intergenic 35.0%
GAAATTACAAGGACCAAAAG+TGG - Chr4:31186404-31186423 None:intergenic 35.0%
GATAACACCTTAACTATGCT+TGG + Chr4:31184824-31184843 MsG0480019984.01.T01:intron 35.0%
GATTCCATGCAATATGGATA+TGG + Chr4:31182605-31182624 MsG0480019984.01.T01:CDS 35.0%
GCATATATGATGTATGATGG+TGG + Chr4:31182755-31182774 MsG0480019984.01.T01:CDS 35.0%
GGTGTTTACCCATAATTGTA+AGG - Chr4:31186221-31186240 None:intergenic 35.0%
GGTTCAACTCTTTACAATAC+TGG - Chr4:31183435-31183454 None:intergenic 35.0%
TCAATCACTCATTGTAAGGA+TGG - Chr4:31182915-31182934 None:intergenic 35.0%
TCCCATCAATGACAATGATA+AGG - Chr4:31184574-31184593 None:intergenic 35.0%
TGAAGACTAGAAAAGTCTAG+AGG - Chr4:31183514-31183533 None:intergenic 35.0%
TTAGTTGTTAGCGATAGTCA+TGG + Chr4:31188000-31188019 MsG0480019984.01.T01:intron 35.0%
TTCCATGCAATATGGATATG+GGG + Chr4:31182607-31182626 MsG0480019984.01.T01:CDS 35.0%
TTCCGAAAAATGGTCAACTT+TGG - Chr4:31187492-31187511 None:intergenic 35.0%
TTGAGGTTAGGAAGTTGTTA+GGG - Chr4:31184322-31184341 None:intergenic 35.0%
! ATAGAAAGGCACACAAATGA+AGG - Chr4:31184911-31184930 None:intergenic 35.0%
! ATTGAAGCACTCATCAATGT+CGG - Chr4:31187458-31187477 None:intergenic 35.0%
! ATTGGGGGTAATAGTCATTT+TGG - Chr4:31187002-31187021 None:intergenic 35.0%
! CTATGTATTCCTCTAGTTTG+AGG - Chr4:31184339-31184358 None:intergenic 35.0%
! CTTCATGGGATCGATATTTT+TGG + Chr4:31183529-31183548 MsG0480019984.01.T01:intron 35.0%
! GAGAAGAATTGAGGATTTTG+TGG - Chr4:31185686-31185705 None:intergenic 35.0%
! GTGAGGAATCTGAAATTACA+AGG - Chr4:31186415-31186434 None:intergenic 35.0%
! TATTCCTCTAGTTTGAGGTT+AGG - Chr4:31184334-31184353 None:intergenic 35.0%
! TTTGAGGTTAGGAAGTTGTT+AGG - Chr4:31184323-31184342 None:intergenic 35.0%
!! ACGGATTTTAGGTAATTGGT+TGG - Chr4:31187610-31187629 None:intergenic 35.0%
!! ATCGCGTGTTTTATTATGCA+TGG + Chr4:31183140-31183159 MsG0480019984.01.T01:intron 35.0%
!! CGGATTTTAGGTAATTGGTT+GGG - Chr4:31187609-31187628 None:intergenic 35.0%
!! CTAGACTTTTCTAGTCTTCA+TGG + Chr4:31183514-31183533 MsG0480019984.01.T01:intron 35.0%
!! TGCCAAAGTTGACCATTTTT+CGG + Chr4:31187487-31187506 MsG0480019984.01.T01:intron 35.0%
!!! GCAAGAGTTTTTTTCATTGG+GGG - Chr4:31187017-31187036 None:intergenic 35.0%
!!! TTATTTTTGGGGGATTTGCA+CGG + Chr4:31184956-31184975 MsG0480019984.01.T01:intron 35.0%
AAAATGAGGGACCAAAAGTG+AGG - Chr4:31186432-31186451 None:intergenic 40.0%
AAATGGTGAACATGGGATTC+AGG + Chr4:31182937-31182956 MsG0480019984.01.T01:intron 40.0%
AATCTAATGAGGGTTGAGCA+CGG - Chr4:31187629-31187648 None:intergenic 40.0%
AATGGTGAACATGGGATTCA+GGG + Chr4:31182938-31182957 MsG0480019984.01.T01:intron 40.0%
AATTTGATTGAAGGAGTGGG+AGG - Chr4:31185365-31185384 None:intergenic 40.0%
ACAGCAGCAGTTATACTTCT+AGG - Chr4:31188204-31188223 None:intergenic 40.0%
ACTAGCAATCAAACAACACG+TGG - Chr4:31183408-31183427 None:intergenic 40.0%
ACTTCCTAACCTCAAACTAG+AGG + Chr4:31184327-31184346 MsG0480019984.01.T01:intron 40.0%
AGTATTACAGGGACGAAAAG+AGG + Chr4:31186573-31186592 MsG0480019984.01.T01:intron 40.0%
ATATATGCATTACCAGGAGG+AGG - Chr4:31182743-31182762 None:intergenic 40.0%
ATCAAGGTTGTATCAGAGGT+AGG - Chr4:31184995-31185014 None:intergenic 40.0%
ATTGAGCAAAATGAGAGGGT+TGG - Chr4:31182810-31182829 None:intergenic 40.0%
CATACATGGCACGTAAAATG+AGG - Chr4:31186446-31186465 None:intergenic 40.0%
CATATTGCATGGAATCAGCA+CGG - Chr4:31182601-31182620 None:intergenic 40.0%
CCAGATTGAGCAAAATGAGA+GGG - Chr4:31182814-31182833 None:intergenic 40.0%
CTACAACTTAACTTTGTCCG+TGG + Chr4:31183086-31183105 MsG0480019984.01.T01:CDS 40.0%
CTGATACAACCTTGATTGCA+AGG + Chr4:31184999-31185018 MsG0480019984.01.T01:intron 40.0%
GACAAACAGAGTGCATTATC+TGG + Chr4:31186917-31186936 MsG0480019984.01.T01:intron 40.0%
GACCCCTTTATTCTACCTTA+TGG + Chr4:31185810-31185829 MsG0480019984.01.T01:intron 40.0%
GATACCATCGAAGTTTCCAT+TGG - Chr4:31184298-31184317 None:intergenic 40.0%
GCAGCCATAAGGTAGAATAA+AGG - Chr4:31185817-31185836 None:intergenic 40.0%
GCCGAAAAACTAGACAACAA+AGG - Chr4:31187120-31187139 None:intergenic 40.0%
GCGGATGAACCTTACAATTA+TGG + Chr4:31186209-31186228 MsG0480019984.01.T01:intron 40.0%
GGTTAGATTAGAAGGACAAG+TGG + Chr4:31187066-31187085 MsG0480019984.01.T01:intron 40.0%
GTATCAGCAATGAAGACAGA+TGG + Chr4:31188296-31188315 MsG0480019984.01.T01:CDS 40.0%
GTCAGCATAATCTGCATACA+TGG - Chr4:31186460-31186479 None:intergenic 40.0%
GTGTCATCTTTGTGTTTGTC+AGG - Chr4:31186114-31186133 None:intergenic 40.0%
TAAGGGATATAGCTAGGGAT+TGG + Chr4:31184100-31184119 MsG0480019984.01.T01:intron 40.0%
TCAACCATGCTCACAACTAA+TGG - Chr4:31183935-31183954 None:intergenic 40.0%
TCAAGGTTGTATCAGAGGTA+GGG - Chr4:31184994-31185013 None:intergenic 40.0%
TCCAGATTGAGCAAAATGAG+AGG - Chr4:31182815-31182834 None:intergenic 40.0%
TCCATGCAATATGGATATGG+GGG + Chr4:31182608-31182627 MsG0480019984.01.T01:CDS 40.0%
TGCAATCAAGGTTGTATCAG+AGG - Chr4:31184999-31185018 None:intergenic 40.0%
TGGCGAAAGAGAAAACAAGA+GGG - Chr4:31185666-31185685 None:intergenic 40.0%
TTCATCGCCAAGCATAGTTA+AGG - Chr4:31184834-31184853 None:intergenic 40.0%
TTCGATTCTCGGAGGAAAAT+AGG - Chr4:31185026-31185045 None:intergenic 40.0%
TTGAGCAAAATGAGAGGGTT+GGG - Chr4:31182809-31182828 None:intergenic 40.0%
TTGTTCGCTTCTCAAATAGC+AGG - Chr4:31184503-31184522 None:intergenic 40.0%
TTTAATGATATCCACCCTGG+CGG + Chr4:31183372-31183391 MsG0480019984.01.T01:intron 40.0%
! AATCGAGAAGTATAGCTTGC+AGG + Chr4:31188115-31188134 MsG0480019984.01.T01:CDS 40.0%
! AATTTGGATGGGCTTCTTCA+CGG - Chr4:31185629-31185648 None:intergenic 40.0%
! AGAAGTATAACTGCTGCTGT+GGG + Chr4:31188204-31188223 MsG0480019984.01.T01:intron 40.0%
! TAGAAGTATAACTGCTGCTG+TGG + Chr4:31188203-31188222 MsG0480019984.01.T01:intron 40.0%
! TATTTTCCTCCGAGAATCGA+AGG + Chr4:31185025-31185044 MsG0480019984.01.T01:intron 40.0%
! TGTTTTCCAGCTTGTATGCA+AGG + Chr4:31183839-31183858 MsG0480019984.01.T01:intron 40.0%
! TTCTAGTTACGTAGTTCCTG+AGG + Chr4:31187549-31187568 MsG0480019984.01.T01:intron 40.0%
! TTGGCTGCTTTGTTATGGTT+TGG + Chr4:31187963-31187982 MsG0480019984.01.T01:intron 40.0%
! TTTCAGATTCCTCCCACTTT+TGG + Chr4:31186388-31186407 MsG0480019984.01.T01:intron 40.0%
!! ATGATGTATGATGGTGGTGA+GGG + Chr4:31182761-31182780 MsG0480019984.01.T01:CDS 40.0%
!! GAGCACGGATTTTAGGTAAT+TGG - Chr4:31187614-31187633 None:intergenic 40.0%
!! GATTCTGCTGACTTGATGAA+AGG - Chr4:31186349-31186368 None:intergenic 40.0%
!! TATGATGTATGATGGTGGTG+AGG + Chr4:31182760-31182779 MsG0480019984.01.T01:CDS 40.0%
!!! CATGGGATCGATATTTTTGG+AGG + Chr4:31183532-31183551 MsG0480019984.01.T01:intron 40.0%
!!! GTGTTTTGGCTGCTTTGTTA+TGG + Chr4:31187958-31187977 MsG0480019984.01.T01:intron 40.0%
AATGAAGGACATAGGTGCAG+TGG - Chr4:31184896-31184915 None:intergenic 45.0%
AGCAATCAAACAACACGTGG+TGG - Chr4:31183405-31183424 None:intergenic 45.0%
AGGATTTCGAACCAGGAGAT+TGG - Chr4:31182869-31182888 None:intergenic 45.0%
ATGCTGACGTGGTGAAATGA+GGG + Chr4:31186472-31186491 MsG0480019984.01.T01:intron 45.0%
ATGGAGGGAAACATTTAGCG+AGG - Chr4:31184182-31184201 None:intergenic 45.0%
ATGGTGAACATGGGATTCAG+GGG + Chr4:31182939-31182958 MsG0480019984.01.T01:intron 45.0%
CAAGCTATGTGCGAGTCTTT+CGG + Chr4:31187767-31187786 MsG0480019984.01.T01:intron 45.0%
CAATATGGATATGGGGGAAC+TGG + Chr4:31182614-31182633 MsG0480019984.01.T01:CDS 45.0%
CAGCAGGATGATGATTCATG+AGG - Chr4:31185782-31185801 None:intergenic 45.0%
CTACCAAATGCATGTTTCCG+CGG + Chr4:31184761-31184780 MsG0480019984.01.T01:intron 45.0%
CTTCACGGAGGAAGAAACAA+AGG - Chr4:31185614-31185633 None:intergenic 45.0%
GAAGAAGCCCATCCAAATTG+TGG + Chr4:31185630-31185649 MsG0480019984.01.T01:intron 45.0%
GATTTCGAACCAGGAGATTG+GGG - Chr4:31182867-31182886 None:intergenic 45.0%
GGAATGATTCTGACCTGCAA+TGG + Chr4:31188268-31188287 MsG0480019984.01.T01:CDS 45.0%
GGATTTCGAACCAGGAGATT+GGG - Chr4:31182868-31182887 None:intergenic 45.0%
GGCACACAAATGAAGGACAT+AGG - Chr4:31184904-31184923 None:intergenic 45.0%
GGTTCCAATGGAAACTTCGA+TGG + Chr4:31184291-31184310 MsG0480019984.01.T01:intron 45.0%
GTATGCAGATTATGCTGACG+TGG + Chr4:31186461-31186480 MsG0480019984.01.T01:intron 45.0%
GTGAAATGAGGGACCAAAAG+TGG + Chr4:31186483-31186502 MsG0480019984.01.T01:intron 45.0%
GTGGCGAAAGAGAAAACAAG+AGG - Chr4:31185667-31185686 None:intergenic 45.0%
GTTAATCCTTCGATTCTCGG+AGG - Chr4:31185034-31185053 None:intergenic 45.0%
GTTGTTAGCGATAGTCATGG+TGG + Chr4:31188003-31188022 MsG0480019984.01.T01:intron 45.0%
TATGCTGACGTGGTGAAATG+AGG + Chr4:31186471-31186490 MsG0480019984.01.T01:intron 45.0%
TCATAGTCTAAACGCTTGGC+AGG - Chr4:31188078-31188097 None:intergenic 45.0%
TCCCCCATATCCATATTGCA+TGG - Chr4:31182612-31182631 None:intergenic 45.0%
TCCTGTGCCACAATTTGGAT+GGG - Chr4:31185640-31185659 None:intergenic 45.0%
TGAGATCGCTTGACATGACA+TGG - Chr4:31185583-31185602 None:intergenic 45.0%
TGAGCAAAATGAGAGGGTTG+GGG - Chr4:31182808-31182827 None:intergenic 45.0%
TGAGTTCCTTGCATACAAGC+TGG - Chr4:31183848-31183867 None:intergenic 45.0%
TGGTACCTGAATGTGTAACG+AGG + Chr4:31186656-31186675 MsG0480019984.01.T01:intron 45.0%
TTACAAGGACCAAAAGTGGG+AGG - Chr4:31186400-31186419 None:intergenic 45.0%
TTCCTGTGCCACAATTTGGA+TGG - Chr4:31185641-31185660 None:intergenic 45.0%
! AGACTCGCACATAGCTTGTA+AGG - Chr4:31187765-31187784 None:intergenic 45.0%
! ATTCTGACCTGCAATGGACT+TGG + Chr4:31188274-31188293 MsG0480019984.01.T01:CDS 45.0%
! CCCTCTCATTTTGCTCAATC+TGG + Chr4:31182811-31182830 MsG0480019984.01.T01:CDS 45.0%
! CTTGACAGGTTGAATGTGCA+TGG + Chr4:31183029-31183048 MsG0480019984.01.T01:CDS 45.0%
! GCTTCGTTCTTTGGTTCCAA+TGG + Chr4:31184279-31184298 MsG0480019984.01.T01:intron 45.0%
! TTGAATGTGCATGGCTCTGT+TGG + Chr4:31183038-31183057 MsG0480019984.01.T01:CDS 45.0%
!! AATGAGCCCTTGATTTGCTG+GGG - Chr4:31182665-31182684 None:intergenic 45.0%
!! ATGTGGTGCTACAGAGATTC+TGG - Chr4:31187908-31187927 None:intergenic 45.0%
!! CGTGCTGATTCCATGCAATA+TGG + Chr4:31182599-31182618 MsG0480019984.01.T01:CDS 45.0%
!! CTGCTGACTTGATGAAAGGA+GGG - Chr4:31186345-31186364 None:intergenic 45.0%
!! GAATGAGCCCTTGATTTGCT+GGG - Chr4:31182666-31182685 None:intergenic 45.0%
!! TCTGCTGACTTGATGAAAGG+AGG - Chr4:31186346-31186365 None:intergenic 45.0%
!! TGTGGTGCTACAGAGATTCT+GGG - Chr4:31187907-31187926 None:intergenic 45.0%
!! TTCTGAAGGGAAGCACTTGT+TGG - Chr4:31182844-31182863 None:intergenic 45.0%
!!! GGGATCGATATTTTTGGAGG+AGG + Chr4:31183535-31183554 MsG0480019984.01.T01:intron 45.0%
!!! TTTTTTTTCTTTATTTTTAT+TGG + Chr4:31183597-31183616 MsG0480019984.01.T01:intron 5.0%
AAATTACCGAAGACTCGCCC+TGG + Chr4:31185998-31186017 MsG0480019984.01.T01:CDS 50.0%
AATGGAACCAGTGCTCAGCA+CGG - Chr4:31187824-31187843 None:intergenic 50.0%
ACTGGCTAGGATTTCGAACC+AGG - Chr4:31182876-31182895 None:intergenic 50.0%
ATCCAAAGGATGGAGGAGAG+TGG + Chr4:31182981-31183000 MsG0480019984.01.T01:CDS 50.0%
ATGCATTACCAGGAGGAGGA+GGG - Chr4:31182739-31182758 None:intergenic 50.0%
ATGCTTGGCGATGAAGCTGT+CGG + Chr4:31184839-31184858 MsG0480019984.01.T01:intron 50.0%
GCTGATACCAAGTCCATTGC+AGG - Chr4:31188284-31188303 None:intergenic 50.0%
GGTTGCGTACAAACTGTGAC+TGG - Chr4:31182894-31182913 None:intergenic 50.0%
GTGGTCCTCGTTACACATTC+AGG - Chr4:31186664-31186683 None:intergenic 50.0%
TAACAACCAGGGCGAGTCTT+CGG - Chr4:31186007-31186026 None:intergenic 50.0%
TATGCATTACCAGGAGGAGG+AGG - Chr4:31182740-31182759 None:intergenic 50.0%
TCCATAAACGTCGCCTGGTT+GGG - Chr4:31182693-31182712 None:intergenic 50.0%
TGTTGTCAGTGGCAGCCATA+AGG - Chr4:31185828-31185847 None:intergenic 50.0%
TTGCCGCGGAAACATGCATT+TGG - Chr4:31184767-31184786 None:intergenic 50.0%
! CGTACAAACTGTGACTGGCT+AGG - Chr4:31182889-31182908 None:intergenic 50.0%
! GAGGGTTGAGCACGGATTTT+AGG - Chr4:31187621-31187640 None:intergenic 50.0%
!! ATGTATGATGGTGGTGAGGG+AGG + Chr4:31182764-31182783 MsG0480019984.01.T01:CDS 50.0%
!! CAGGAGATTGGGGTTCTGAA+GGG - Chr4:31182857-31182876 None:intergenic 50.0%
!! GGAATGAGCCCTTGATTTGC+TGG - Chr4:31182667-31182686 None:intergenic 50.0%
!! GTGGTGCTACAGAGATTCTG+GGG - Chr4:31187906-31187925 None:intergenic 50.0%
!! TGAAGGGAAGCACTTGTTGG+AGG - Chr4:31182841-31182860 None:intergenic 50.0%
AAACGTCGCCTGGTTGGGAA+GGG - Chr4:31182688-31182707 None:intergenic 55.0%
AAATGAGAGGGTTGGGGTGG+TGG - Chr4:31182802-31182821 None:intergenic 55.0%
AAGGGGTCGACATACACAGC+AGG - Chr4:31185798-31185817 None:intergenic 55.0%
ATGTGGCGAGCGTGATCCAA+AGG + Chr4:31182967-31182986 MsG0480019984.01.T01:CDS 55.0%
CCTCCACCCCAGCAAATCAA+GGG + Chr4:31182656-31182675 MsG0480019984.01.T01:CDS 55.0%
CCTTCAGAACCCCAATCTCC+TGG + Chr4:31182855-31182874 MsG0480019984.01.T01:CDS 55.0%
CTAGGTCCATAAACGTCGCC+TGG - Chr4:31182698-31182717 None:intergenic 55.0%
GAGCGTGATCCAAAGGATGG+AGG + Chr4:31182974-31182993 MsG0480019984.01.T01:CDS 55.0%
GCAAAATGAGAGGGTTGGGG+TGG - Chr4:31182805-31182824 None:intergenic 55.0%
GCCCATCCAAATTGTGGCAC+AGG + Chr4:31185636-31185655 MsG0480019984.01.T01:intron 55.0%
GCGACGTTTATGGACCTAGC+GGG + Chr4:31182699-31182718 MsG0480019984.01.T01:CDS 55.0%
GGCGACGTTTATGGACCTAG+CGG + Chr4:31182698-31182717 MsG0480019984.01.T01:CDS 55.0%
GGCGTGTCACATTGCTACAC+AGG + Chr4:31188225-31188244 MsG0480019984.01.T01:intron 55.0%
GGCGTTCCTGTGCCACAATT+TGG - Chr4:31185645-31185664 None:intergenic 55.0%
GGTTGCGGAACCCCTGAATA+TGG - Chr4:31182569-31182588 None:intergenic 55.0%
GTCCACTCTCCTCCATCCTT+TGG - Chr4:31182986-31183005 None:intergenic 55.0%
GTCCATAAACGTCGCCTGGT+TGG - Chr4:31182694-31182713 None:intergenic 55.0%
GTGGTGGCTAATTACCGCCA+GGG - Chr4:31183389-31183408 None:intergenic 55.0%
TAAACGTCGCCTGGTTGGGA+AGG - Chr4:31182689-31182708 None:intergenic 55.0%
TATTCAGGGGTTCCGCAACC+AGG + Chr4:31182569-31182588 MsG0480019984.01.T01:CDS 55.0%
TCCCAACCAGGCGACGTTTA+TGG + Chr4:31182689-31182708 MsG0480019984.01.T01:CDS 55.0%
TTGCATGGAATCAGCACGGC+TGG - Chr4:31182597-31182616 None:intergenic 55.0%
TTGCTGACACGTAGCACCTC+AGG - Chr4:31187568-31187587 None:intergenic 55.0%
TTTGGATCACGCTCGCCACA+TGG - Chr4:31182968-31182987 None:intergenic 55.0%
! CCAGGAGATTGGGGTTCTGA+AGG - Chr4:31182858-31182877 None:intergenic 55.0%
! TTGGATGGGCTTCTTCACGG+AGG - Chr4:31185626-31185645 None:intergenic 55.0%
!! ATGATGGTGGTGAGGGAGGA+GGG + Chr4:31182768-31182787 MsG0480019984.01.T01:CDS 55.0%
!! TATGATGGTGGTGAGGGAGG+AGG + Chr4:31182767-31182786 MsG0480019984.01.T01:CDS 55.0%
CGTGGTGGCTAATTACCGCC+AGG - Chr4:31183390-31183409 None:intergenic 60.0%
CTTGGCGATGAAGCTGTCGG+TGG + Chr4:31184842-31184861 MsG0480019984.01.T01:intron 60.0%
GAATCAGCACGGCTGGATCC+TGG - Chr4:31182590-31182609 None:intergenic 60.0%
GCCTCCACCCCAGCAAATCA+AGG + Chr4:31182655-31182674 MsG0480019984.01.T01:CDS 60.0%
GGCGAGCGTGATCCAAAGGA+TGG + Chr4:31182971-31182990 MsG0480019984.01.T01:CDS 60.0%
GGCTCATTCCCTTCCCAACC+AGG + Chr4:31182677-31182696 MsG0480019984.01.T01:CDS 60.0%
GGGATTCAGGGGTGACCATG+TGG + Chr4:31182950-31182969 MsG0480019984.01.T01:intron 60.0%
GTGGCTAATTACCGCCAGGG+TGG - Chr4:31183386-31183405 None:intergenic 60.0%
TCACCCTGACCACCCTCTCT+GGG - Chr4:31183065-31183084 None:intergenic 60.0%
TGCACTACCGTGCTGAGCAC+TGG + Chr4:31187814-31187833 MsG0480019984.01.T01:intron 60.0%
TTCACCCTGACCACCCTCTC+TGG - Chr4:31183066-31183085 None:intergenic 60.0%
TTGCTGGGGTGGAGGCTGTT+GGG - Chr4:31182651-31182670 None:intergenic 60.0%
TTTGCTGGGGTGGAGGCTGT+TGG - Chr4:31182652-31182671 None:intergenic 60.0%
!! CCCTTGATTTGCTGGGGTGG+AGG - Chr4:31182659-31182678 None:intergenic 60.0%
!! GAGCCCTTGATTTGCTGGGG+TGG - Chr4:31182662-31182681 None:intergenic 60.0%
CACCCTGACCACCCTCTCTG+GGG - Chr4:31183064-31183083 None:intergenic 65.0%
GCACGGCTGGATCCTGGTTG+CGG - Chr4:31182584-31182603 None:intergenic 65.0%
GGCTCTGTTGGCCCCAGAGA+GGG + Chr4:31183050-31183069 MsG0480019984.01.T01:CDS 65.0%
TCTGTTGGCCCCAGAGAGGG+TGG + Chr4:31183053-31183072 MsG0480019984.01.T01:CDS 65.0%
TGCTGGGGTGGAGGCTGTTG+GGG - Chr4:31182650-31182669 None:intergenic 65.0%
! TGGCTCTGTTGGCCCCAGAG+AGG + Chr4:31183049-31183068 MsG0480019984.01.T01:CDS 65.0%
GGCCCCAGAGAGGGTGGTCA+GGG + Chr4:31183059-31183078 MsG0480019984.01.T01:CDS 70.0%
TGGACCTAGCGGGACCCACC+CGG + Chr4:31182709-31182728 MsG0480019984.01.T01:CDS 70.0%
TGGCCCCAGAGAGGGTGGTC+AGG + Chr4:31183058-31183077 MsG0480019984.01.T01:CDS 70.0%
! CCAGGAGGAGGAGGGAGTGC+CGG - Chr4:31182731-31182750 None:intergenic 70.0%
!! AGGAGGAGGGAGTGCCGGGT+GGG - Chr4:31182726-31182745 None:intergenic 70.0%
!! CAGGAGGAGGAGGGAGTGCC+GGG - Chr4:31182730-31182749 None:intergenic 70.0%
CCGGCACTCCCTCCTCCTCC+TGG + Chr4:31182728-31182747 MsG0480019984.01.T01:CDS 75.0%
! AGTGCCGGGTGGGTCCCGCT+AGG - Chr4:31182716-31182735 None:intergenic 75.0%
!! GAGGAGGAGGGAGTGCCGGG+TGG - Chr4:31182727-31182746 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 31182563 31188324 31182563 ID=MsG0480019984.01;Name=MsG0480019984.01
Chr4 mRNA 31182563 31188324 31182563 ID=MsG0480019984.01.T01;Parent=MsG0480019984.01;Name=MsG0480019984.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0.4|0.5|1|1|1|6|0|252
Chr4 exon 31182563 31182876 31182563 ID=MsG0480019984.01.T01:exon:10221;Parent=MsG0480019984.01.T01
Chr4 exon 31182959 31183112 31182959 ID=MsG0480019984.01.T01:exon:10222;Parent=MsG0480019984.01.T01
Chr4 exon 31185942 31186019 31185942 ID=MsG0480019984.01.T01:exon:10223;Parent=MsG0480019984.01.T01
Chr4 exon 31186102 31186177 31186102 ID=MsG0480019984.01.T01:exon:10224;Parent=MsG0480019984.01.T01
Chr4 exon 31188064 31188136 31188064 ID=MsG0480019984.01.T01:exon:10225;Parent=MsG0480019984.01.T01
Chr4 exon 31188261 31188324 31188261 ID=MsG0480019984.01.T01:exon:10226;Parent=MsG0480019984.01.T01
Chr4 CDS 31182563 31182876 31182563 ID=MsG0480019984.01.T01:cds;Parent=MsG0480019984.01.T01
Chr4 CDS 31182959 31183112 31182959 ID=MsG0480019984.01.T01:cds;Parent=MsG0480019984.01.T01
Chr4 CDS 31185942 31186019 31185942 ID=MsG0480019984.01.T01:cds;Parent=MsG0480019984.01.T01
Chr4 CDS 31186102 31186177 31186102 ID=MsG0480019984.01.T01:cds;Parent=MsG0480019984.01.T01
Chr4 CDS 31188064 31188136 31188064 ID=MsG0480019984.01.T01:cds;Parent=MsG0480019984.01.T01
Chr4 CDS 31188261 31188324 31188261 ID=MsG0480019984.01.T01:cds;Parent=MsG0480019984.01.T01
Gene Sequence

>MsG0480019984.01.T01

ATGCCATATTCAGGGGTTCCGCAACCAGGATCCAGCCGTGCTGATTCCATGCAATATGGATATGGGGGAACTGGTAGAACAGTTCCCCAACAGCCTCCACCCCAGCAAATCAAGGGCTCATTCCCTTCCCAACCAGGCGACGTTTATGGACCTAGCGGGACCCACCCGGCACTCCCTCCTCCTCCTGGTAATGCATATATGATGTATGATGGTGGTGAGGGAGGAGGGCACATCATCCACCACCCCAACCCTCTCATTTTGCTCAATCTGGATATCCTCCAACAAGTGCTTCCCTTCAGAACCCCAATCTCCTGGGGTGACCATGTGGCGAGCGTGATCCAAAGGATGGAGGAGAGTGGACAGACCATAGATTTCAACTCTGTTCTTGACAGGTTGAATGTGCATGGCTCTGTTGGCCCCAGAGAGGGTGGTCAGGGTGAACTACAACTTAACTTTGTCCGTGGAATTGATTATTACAAAGTGCTGGAGATTGAATATGATGCAACAGATGAAGATATCAGATTAAATTACCGAAGACTCGCCCTGAAATGGCATCCTGACAAACACAAAGATGACACTGCTGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTGAGCGATCCTGCCAAGCGTTTAGACTATGATTTAACTGGGGCATGTGAATCGAGAAGTATAGCTTGCAGATTTAAAGGAATGATTCTGACCTGCAATGGACTTGGTATCAGCAATGAAGACAGATGGTATTAG
Protein sequence

>MsG0480019984.01.T01

MPYSGVPQPGSSRADSMQYGYGGTGRTVPQQPPPQQIKGSFPSQPGDVYGPSGTHPALPPPPGNAYMMYDGGEGGGHIIHHPNPLILLNLDILQQVLPFRTPISWGDHVASVIQRMEESGQTIDFNSVLDRLNVHGSVGPREGGQGELQLNFVRGIDYYKVLEIEYDATDEDIRLNYRRLALKWHPDKHKDDTAVTAKFQEINEAYNVLSDPAKRLDYDLTGACESRSIACRFKGMILTCNGLGISNEDRWY*