AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046922.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046922.01.T01 MTR_4g117220 78.868 530 52 10 1 488 1 512 7.70e-136 402
MsG0880046922.01.T01 MTR_4g117140 87.372 293 23 4 1 293 1 279 3.81e-88 280
MsG0880046922.01.T01 MTR_2g022250 64.865 259 65 10 1 255 1 237 5.53e-56 194
MsG0880046922.01.T01 MTR_2g022240 49.248 532 172 22 1 488 1 478 2.23e-50 179
MsG0880046922.01.T01 MTR_1g107565 70.513 78 20 1 1 75 1 78 1.44e-29 119
MsG0880046922.01.T01 MTR_1g082650 46.296 216 66 5 1 215 1 167 1.92e-29 122
MsG0880046922.01.T01 MTR_4g119820 50.000 114 41 3 7 120 71 168 2.55e-24 104
MsG0880046922.01.T01 MTR_7g108560 67.143 70 23 0 5 74 17 86 3.58e-24 102
MsG0880046922.01.T01 MTR_3g067750 53.521 71 33 0 3 73 5 75 4.85e-19 85.9
MsG0880046922.01.T01 MTR_1g083310 57.333 75 31 1 4 77 9 83 8.31e-19 88.6
MsG0880046922.01.T01 MTR_7g113110 53.521 71 33 0 9 79 32 102 2.46e-18 87.0
MsG0880046922.01.T01 MTR_2g436830 60.000 70 28 0 5 74 10 79 2.67e-17 82.8
MsG0880046922.01.T01 MTR_5g097550 59.375 64 25 1 12 74 15 78 1.04e-15 77.4
MsG0880046922.01.T01 MTR_1g092670 39.189 74 45 0 10 83 4 77 2.35e-13 65.9
MsG0880046922.01.T01 MTR_8g091420 52.459 61 29 0 14 74 33 93 9.14e-13 66.2
MsG0880046922.01.T01 MTR_6g026890 40.625 64 38 0 14 77 20 83 9.71e-13 66.2
MsG0880046922.01.T01 MTR_1g030630 45.902 61 33 0 14 74 29 89 1.87e-12 65.5
MsG0880046922.01.T01 MTR_2g018790 32.283 127 77 3 8 125 6 132 2.79e-12 67.8
MsG0880046922.01.T01 MTR_3g087770 47.761 67 35 0 8 74 28 94 2.81e-12 65.1
MsG0880046922.01.T01 MTR_1g078090 38.356 73 45 0 7 79 50 122 3.97e-12 65.5
MsG0880046922.01.T01 MTR_2g091235 42.254 71 41 0 14 84 6 76 5.84e-12 63.9
MsG0880046922.01.T01 MTR_4g057765 48.276 87 43 2 12 96 68 154 7.51e-12 67.0
MsG0880046922.01.T01 MTR_5g025150 37.179 78 49 0 3 80 16 93 1.53e-11 62.8
MsG0880046922.01.T01 MTR_7g013660 37.037 81 51 0 13 93 7 87 1.60e-11 62.0
MsG0880046922.01.T01 MTR_7g083060 33.654 104 62 3 2 98 16 119 2.02e-11 62.4
MsG0880046922.01.T01 MTR_5g020960 41.176 68 40 0 9 76 2 69 8.83e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046922.01.T01 AT3G06130 51.736 288 94 9 1 276 1 255 1.44e-46 165
MsG0880046922.01.T01 AT3G06130 51.736 288 94 9 1 276 1 255 2.53e-45 165
MsG0880046922.01.T01 AT5G19090 70.000 120 27 1 1 111 1 120 5.40e-43 160
MsG0880046922.01.T01 AT5G19090 70.000 120 27 1 1 111 1 120 5.40e-43 160
MsG0880046922.01.T01 AT5G19090 70.000 120 27 1 1 111 1 120 5.40e-43 160
MsG0880046922.01.T01 AT3G05220 63.514 74 27 0 1 74 1 74 2.11e-26 113
MsG0880046922.01.T01 AT5G27690 52.475 101 43 1 5 105 25 120 2.90e-26 110
MsG0880046922.01.T01 AT1G23000 61.628 86 29 2 1 83 1 85 9.05e-26 108
MsG0880046922.01.T01 AT1G23000 61.628 86 29 2 1 83 61 145 2.46e-25 108
MsG0880046922.01.T01 AT5G37860 54.412 68 31 0 9 76 9 76 3.22e-19 87.8
MsG0880046922.01.T01 AT1G56210 54.667 75 33 1 10 83 40 114 1.53e-18 87.4
MsG0880046922.01.T01 AT1G06330 46.875 64 34 0 14 77 6 69 3.65e-13 67.4
MsG0880046922.01.T01 AT3G56891 43.750 64 36 0 14 77 20 83 7.78e-13 67.0
MsG0880046922.01.T01 AT1G66240 40.000 65 39 0 10 74 33 97 4.62e-12 63.2
MsG0880046922.01.T01 AT4G10465 36.957 92 58 0 1 92 42 133 5.33e-12 65.1
MsG0880046922.01.T01 AT3G02960 41.892 74 42 1 3 75 119 192 2.62e-11 64.3
MsG0880046922.01.T01 AT4G23882 43.678 87 38 3 9 84 77 163 2.99e-11 64.7
MsG0880046922.01.T01 AT3G56240 41.791 67 39 0 10 76 3 69 5.36e-11 60.5
MsG0880046922.01.T01 AT3G56240 41.791 67 39 0 10 76 3 69 5.36e-11 60.5
MsG0880046922.01.T01 AT1G71050 39.394 66 40 0 9 74 27 92 6.87e-11 60.8

Find 169 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGGAAGGTCACAGTTTC+AGG 0.145406 8:-79960929 MsG0880046922.01.T01:CDS
CAAGATCTAGCTCAATTTAA+AGG 0.182916 8:-79960578 MsG0880046922.01.T01:CDS
TAGGATTCTGATTCGGGTTC+TGG 0.245506 8:+79960525 None:intergenic
GGATTCCCCTGCATCATTTC+CGG 0.253390 8:+79959752 None:intergenic
AAGAGGCAAGTTTGAGAGTT+AGG 0.278652 8:+79961576 None:intergenic
ACAACAACAGCAACAGTTAA+TGG 0.289999 8:-79959705 MsG0880046922.01.T01:CDS
TATTGTTTCCACCACCCTTC+TGG 0.290425 8:+79960711 None:intergenic
CATCTTTAGGATTCTGATTC+GGG 0.295568 8:+79960519 None:intergenic
TTGTATTTGTTGACCACCTT+TGG 0.297173 8:+79960682 None:intergenic
ATCAAGAAGCTTGCAAAATC+AGG 0.297726 8:-79960884 MsG0880046922.01.T01:CDS
TTAACACCTTTAGCATCTTT+AGG 0.299936 8:+79960506 None:intergenic
CCCTGCATCATTTCCGGTCC+TGG 0.305122 8:+79959758 None:intergenic
AGCTTCTTGATGAGAACATT+TGG 0.309355 8:+79960896 None:intergenic
TCAATCTCATCCTGGTAGTA+TGG 0.312405 8:-79959903 MsG0880046922.01.T01:CDS
GTTACTTACTTTATTCCTAT+TGG 0.313104 8:-79961385 MsG0880046922.01.T01:five_prime_UTR
CCATTCCCCATAGGCATAGA+AGG 0.318053 8:+79960344 None:intergenic
CTTCTTTACTCATGACCAAT+AGG 0.330043 8:+79961370 None:intergenic
TAAGGATCTGGAGGAGGATA+AGG 0.339463 8:+79959569 None:intergenic
GCATCTTTAGGATTCTGATT+CGG 0.340947 8:+79960518 None:intergenic
TCTGATTCGGGTTCTGGCCC+GGG 0.343572 8:+79960531 None:intergenic
ACTGATTAACAACGTTGTTC+TGG 0.344905 8:+79960807 None:intergenic
GGTGATTATAGATCTGAAAA+TGG 0.348415 8:+79961444 None:intergenic
GGCGGAGGTGGAGGCGGTGG+TGG 0.350490 8:-79959983 MsG0880046922.01.T01:CDS
GAGAGTTAGGAGAGAGAGAA+TGG 0.355103 8:+79961589 None:intergenic
TTCTGATTCGGGTTCTGGCC+CGG 0.355308 8:+79960530 None:intergenic
GGGTGGTGGAGGAAATAATA+TGG 0.357181 8:-79959882 MsG0880046922.01.T01:CDS
TTACCACCCATTCGGTTCAT+AGG 0.360924 8:+79959845 None:intergenic
CTAAAATCATCCTCATCTTC+AGG 0.371343 8:+79960473 None:intergenic
GGTGGCGGAGGTGGAGGCGG+TGG 0.373427 8:-79959986 MsG0880046922.01.T01:CDS
TGAAATGAAATGAGAATAGA+AGG 0.374304 8:+79961512 None:intergenic
AAGGAAAAGAGAGAAATAAA+TGG 0.382972 8:+79961531 None:intergenic
TACTTTCAAGGTGGTGGTGG+TGG 0.384334 8:-79959782 MsG0880046922.01.T01:CDS
TAGTAGTCACTGAGAGAGAA+TGG 0.385371 8:+79961619 None:intergenic
AAGAAAGGTGGTGGTGGTGG+TGG 0.386759 8:-79960155 MsG0880046922.01.T01:CDS
AATGGTGGTGGTGGCGGAAA+TGG 0.397465 8:-79960257 MsG0880046922.01.T01:CDS
CAGGGAAACATGCCGAGTTA+TGG 0.402581 8:-79960865 MsG0880046922.01.T01:CDS
ACTTGTGATAAATAAAGATC+TGG 0.404190 8:+79961406 None:intergenic
CCAATTGGTGGCGGAGGTGG+AGG 0.411942 8:-79959992 MsG0880046922.01.T01:CDS
TGTATTTGTTGACCACCTTT+GGG 0.413549 8:+79960683 None:intergenic
CAGAAACCTGGTGGTGGTGG+TGG 0.418442 8:-79960233 MsG0880046922.01.T01:CDS
AATGTTCAGGCTATGAATAA+TGG 0.423799 8:-79959959 MsG0880046922.01.T01:CDS
GCTTCTTGATGAGAACATTT+GGG 0.423822 8:+79960897 None:intergenic
CACGGCATGAATGGTGGAAA+TGG 0.424726 8:-79960188 MsG0880046922.01.T01:CDS
AAAATCTTACAGAAAATTGA+TGG 0.430085 8:-79961138 MsG0880046922.01.T01:intron
ATGATGGGTGGTGGAGGTGG+TGG 0.432564 8:-79959926 MsG0880046922.01.T01:CDS
AAAATGATGGGTGGTGGAGG+TGG 0.436665 8:-79959929 MsG0880046922.01.T01:CDS
GGTAACATTCCTGCTGTTCA+AGG 0.436866 8:-79959827 MsG0880046922.01.T01:CDS
AGGCGGTGGTGGTAATGTTC+AGG 0.438058 8:-79959972 MsG0880046922.01.T01:CDS
GGTTACTTTCAAGGTGGTGG+TGG 0.439749 8:-79959785 MsG0880046922.01.T01:CDS
CCTCCACCTCCGCCACCAAT+TGG 0.440018 8:+79959992 None:intergenic
TTCATGCCGTGAATTTGAAC+CGG 0.440785 8:+79960200 None:intergenic
GGAAAGAAAGGTGGTGGTGG+TGG 0.445640 8:-79960158 MsG0880046922.01.T01:CDS
ATTGGTGGCGGAGGTGGAGG+CGG 0.453929 8:-79959989 MsG0880046922.01.T01:CDS
ATACCAATTGGTGGCGGAGG+TGG 0.457299 8:-79959995 MsG0880046922.01.T01:CDS
CCTTCTATGCCTATGGGGAA+TGG 0.458052 8:-79960344 MsG0880046922.01.T01:CDS
TGATGAGTTTGATGATGAAA+TGG 0.461887 8:-79960396 MsG0880046922.01.T01:CDS
AACAACTTCAACAGATGAAA+GGG 0.462139 8:-79960604 MsG0880046922.01.T01:CDS
CGGTTCATAGGCATACTCAT+TGG 0.463995 8:+79959857 None:intergenic
ACAGCTTATGAGTGCTATGA+AGG 0.465021 8:-79960291 MsG0880046922.01.T01:CDS
AAGGATCTGGAGGAGGATAA+GGG 0.466318 8:+79959570 None:intergenic
GGTCTACCGGCAGGCGGAGG+AGG 0.468185 8:-79959806 MsG0880046922.01.T01:CDS
AAAGCATGTGAGTAAGGATC+TGG 0.469198 8:+79959557 None:intergenic
TGGTGGTGGTGGTCCAGGAC+CGG 0.469917 8:-79959771 MsG0880046922.01.T01:CDS
AAGAGTCTCTGAAACATAAG+AGG 0.472199 8:+79961559 None:intergenic
TCCAGGACCGGAAATGATGC+AGG 0.480211 8:-79959759 MsG0880046922.01.T01:CDS
GGCGGAGGAGGTTACTTTCA+AGG 0.482444 8:-79959794 MsG0880046922.01.T01:CDS
ATTGACAATGGCAAAGGTGG+TGG 0.482824 8:-79960770 MsG0880046922.01.T01:CDS
AGTAGTCACTGAGAGAGAAT+GGG 0.484635 8:+79961620 None:intergenic
CAATCTCATCCTGGTAGTAT+GGG 0.490190 8:-79959902 MsG0880046922.01.T01:CDS
TGGTGGTGGAGGACCTGTGC+CGG 0.493420 8:-79960219 MsG0880046922.01.T01:CDS
TCGCTGAAAGCATGTGAGTA+AGG 0.494235 8:+79959551 None:intergenic
GAAGGTATGTCGATACCAAT+TGG 0.495826 8:-79960007 MsG0880046922.01.T01:CDS
TCCTGCTGTTCAAGGTCTAC+CGG 0.501026 8:-79959819 MsG0880046922.01.T01:CDS
GTTAGGAGAGAGAGAATGGT+GGG 0.502449 8:+79961593 None:intergenic
GCCGGTAGACCTTGAACAGC+AGG 0.503563 8:+79959818 None:intergenic
GGTGGCCTTGCATACATCAT+TGG 0.504586 8:+79959623 None:intergenic
TCTGGAGGAGGATAAGGGTA+AGG 0.506412 8:+79959575 None:intergenic
CATCCTGGTAGTATGGGTGG+TGG 0.513520 8:-79959896 MsG0880046922.01.T01:CDS
GTTCAAATTCACGGCATGAA+TGG 0.514493 8:-79960197 MsG0880046922.01.T01:CDS
CCGTGAATTTGAACCGGCAC+AGG 0.516132 8:+79960206 None:intergenic
GGAGGTTACTTTCAAGGTGG+TGG 0.516276 8:-79959788 MsG0880046922.01.T01:CDS
GGTGGTGGAGGAAATAATAT+GGG 0.517548 8:-79959881 MsG0880046922.01.T01:CDS
AAGTAACCTCCTCCGCCTGC+CGG 0.520732 8:+79959800 None:intergenic
CAGAATCCTAAAGATGCTAA+AGG 0.521196 8:-79960512 MsG0880046922.01.T01:CDS
AATCAAAACCAGAAGGGTGG+TGG 0.522342 8:-79960719 MsG0880046922.01.T01:CDS
GGAGGAAAGAAAGGTGGTGG+TGG 0.522847 8:-79960161 MsG0880046922.01.T01:CDS
CAGGAATGTTACCACCCATT+CGG 0.525275 8:+79959837 None:intergenic
GGTGCTCACATGATGTTGAA+TGG 0.526053 8:-79960323 MsG0880046922.01.T01:CDS
CAACAACTTCAACAGATGAA+AGG 0.526664 8:-79960605 MsG0880046922.01.T01:CDS
CAAGGTCTACCGGCAGGCGG+AGG 0.530336 8:-79959809 MsG0880046922.01.T01:CDS
ATGTAATTCACCTCAGGAGG+TGG 0.534211 8:+79959605 None:intergenic
AATGGCAATGGAGGAAAGAA+AGG 0.535264 8:-79960170 MsG0880046922.01.T01:CDS
CCTGGTAGTATGGGTGGTGG+AGG 0.540462 8:-79959893 MsG0880046922.01.T01:CDS
GTGCTCACATGATGTTGAAT+GGG 0.541270 8:-79960322 MsG0880046922.01.T01:CDS
TCATTGGCTGCTGAAATCTC+TGG 0.541514 8:+79959639 None:intergenic
GCTGTTCAAGGTCTACCGGC+AGG 0.542942 8:-79959815 MsG0880046922.01.T01:CDS
GGACAGAAACCTGGTGGTGG+TGG 0.543498 8:-79960236 MsG0880046922.01.T01:CDS
CCTGTGCCGGTTCAAATTCA+CGG 0.544320 8:-79960206 MsG0880046922.01.T01:CDS
GAATCACATGACATTGCAGC+TGG 0.546046 8:+79959517 None:intergenic
GGAGGAGGATAAGGGTAAGG+AGG 0.547967 8:+79959578 None:intergenic
CTTGTGATAAATAAAGATCT+GGG 0.548351 8:+79961407 None:intergenic
CCTCCACCACCCATACTACC+AGG 0.550212 8:+79959893 None:intergenic
TCAAGAAGCTTGCAAAATCA+GGG 0.551852 8:-79960883 MsG0880046922.01.T01:CDS
GGCGGAAATGGACAGAAACC+TGG 0.552019 8:-79960245 MsG0880046922.01.T01:CDS
AGTTAGGAGAGAGAGAATGG+TGG 0.552241 8:+79961592 None:intergenic
TCGATACCAATTGGTGGCGG+AGG 0.554646 8:-79959998 MsG0880046922.01.T01:CDS
GATGCCGCTGAATCAGCACC+CGG 0.559535 8:-79960549 MsG0880046922.01.T01:CDS
GGTGGTGGTCAATCTCATCC+TGG 0.561328 8:-79959911 MsG0880046922.01.T01:CDS
GATGAATCAACGTGCTGCTA+TGG 0.564311 8:-79959672 MsG0880046922.01.T01:CDS
CAAATTCACGGCATGAATGG+TGG 0.565701 8:-79960194 MsG0880046922.01.T01:CDS
GGAGGGAATAATCAGAATCA+AGG 0.567228 8:-79960134 MsG0880046922.01.T01:CDS
TGAAGTTGTTGCTGCTGCTG+AGG 0.567794 8:+79960644 None:intergenic
GGATACATGTAATTCACCTC+AGG 0.568572 8:+79959599 None:intergenic
CATTCCCCATAGGCATAGAA+GGG 0.572536 8:+79960345 None:intergenic
GAATCAACGTGCTGCTATGG+TGG 0.576359 8:-79959669 MsG0880046922.01.T01:CDS
TTTGTTGACCACCTTTGGGT+TGG 0.576873 8:+79960687 None:intergenic
ATGAATGGTGGAAATGGCAA+TGG 0.579729 8:-79960182 MsG0880046922.01.T01:CDS
GAGTTTGATGATGAAATGGT+TGG 0.582338 8:-79960392 MsG0880046922.01.T01:CDS
GGTCACAGTTTCAGGGAATG+TGG 0.584262 8:-79960921 MsG0880046922.01.T01:CDS
AGCAGCCAATGATGTATGCA+AGG 0.586173 8:-79959628 MsG0880046922.01.T01:CDS
AAGGGAAGGTCACAGTTTCA+GGG 0.589814 8:-79960928 MsG0880046922.01.T01:CDS
AAATCAGAATCAAAACCAGA+AGG 0.592384 8:-79960726 MsG0880046922.01.T01:CDS
TGGCCCGGGTGCTGATTCAG+CGG 0.593907 8:+79960545 None:intergenic
GGTCCTCCACCACCACCACC+AGG 0.597489 8:+79960227 None:intergenic
TTTGGGAACACTCCATAACT+CGG 0.598490 8:+79960853 None:intergenic
ATTTGATGTGCCTGAAGATG+AGG 0.599659 8:-79960483 MsG0880046922.01.T01:CDS
GGCAATGGAGGAAAGAAAGG+TGG 0.603629 8:-79960167 MsG0880046922.01.T01:CDS
AATCAGAATCAAAACCAGAA+GGG 0.603694 8:-79960725 MsG0880046922.01.T01:CDS
TGTGAGTAAGGATCTGGAGG+AGG 0.603879 8:+79959563 None:intergenic
AACAATAACCAACCCAAAGG+TGG 0.605261 8:-79960695 MsG0880046922.01.T01:CDS
AATAATCAGAATCAAGGTGG+AGG 0.605707 8:-79960128 MsG0880046922.01.T01:intron
AATGGAGGAAAGAAAGGTGG+TGG 0.606743 8:-79960164 MsG0880046922.01.T01:CDS
CAAATTGACAATGGCAAAGG+TGG 0.610618 8:-79960773 MsG0880046922.01.T01:CDS
TTCATAGCACTCATAAGCTG+TGG 0.610940 8:+79960293 None:intergenic
ATGCAAATTGACAATGGCAA+AGG 0.611165 8:-79960776 MsG0880046922.01.T01:CDS
TCTCATCCTGGTAGTATGGG+TGG 0.611507 8:-79959899 MsG0880046922.01.T01:CDS
AAAGTGAACATACACTGTGA+TGG 0.617847 8:-79961180 MsG0880046922.01.T01:CDS
CCAGGACCGGAAATGATGCA+GGG 0.618163 8:-79959758 MsG0880046922.01.T01:CDS
ATGTGAGCACCATTCCCCAT+AGG 0.619841 8:+79960335 None:intergenic
ACTGAGATAGATGCAGAACA+AGG 0.622005 8:-79960947 MsG0880046922.01.T01:CDS
AGTATGCCTATGAACCGAAT+GGG 0.622246 8:-79959851 MsG0880046922.01.T01:CDS
AAGAACATGCAAATTGACAA+TGG 0.628311 8:-79960782 MsG0880046922.01.T01:CDS
GGTCAACAAATACAAATACA+AGG 0.629935 8:-79960674 MsG0880046922.01.T01:CDS
ATGCCGCTGAATCAGCACCC+GGG 0.631365 8:-79960548 MsG0880046922.01.T01:CDS
GTTCAAGGTCTACCGGCAGG+CGG 0.633909 8:-79959812 MsG0880046922.01.T01:CDS
GCATGTGAGTAAGGATCTGG+AGG 0.633919 8:+79959560 None:intergenic
GTAGTCACTGAGAGAGAATG+GGG 0.633943 8:+79961621 None:intergenic
ATGTCGATACCAATTGGTGG+CGG 0.637455 8:-79960001 MsG0880046922.01.T01:CDS
CTTATGAGTGCTATGAAGGG+TGG 0.638762 8:-79960287 MsG0880046922.01.T01:CDS
TACATGTAATTCACCTCAGG+AGG 0.640426 8:+79959602 None:intergenic
GATAGATGCAGAACAAGGGA+AGG 0.641999 8:-79960942 MsG0880046922.01.T01:CDS
CAGCTTATGAGTGCTATGAA+GGG 0.642847 8:-79960290 MsG0880046922.01.T01:CDS
ATGCCTATGAACCGAATGGG+TGG 0.650716 8:-79959848 MsG0880046922.01.T01:CDS
GAGTATGCCTATGAACCGAA+TGG 0.653536 8:-79959852 MsG0880046922.01.T01:CDS
AATGGACAGAAACCTGGTGG+TGG 0.653878 8:-79960239 MsG0880046922.01.T01:CDS
GGTATGTCGATACCAATTGG+TGG 0.657192 8:-79960004 MsG0880046922.01.T01:CDS
CAGAATCAAAACCAGAAGGG+TGG 0.662734 8:-79960722 MsG0880046922.01.T01:CDS
AATGGTGGAAATGGCAATGG+AGG 0.665518 8:-79960179 MsG0880046922.01.T01:CDS
CTGAGATAGATGCAGAACAA+GGG 0.666808 8:-79960946 MsG0880046922.01.T01:CDS
CAGGACCGGAAATGATGCAG+GGG 0.670762 8:-79959757 MsG0880046922.01.T01:CDS
ATTCCCCATAGGCATAGAAG+GGG 0.672578 8:+79960346 None:intergenic
AAAGGTGGTGGAAACAACAA+AGG 0.677851 8:-79960758 MsG0880046922.01.T01:CDS
GGGAATAATCAGAATCAAGG+TGG 0.678494 8:-79960131 MsG0880046922.01.T01:CDS
GGAAACAATAACCAACCCAA+AGG 0.682874 8:-79960698 MsG0880046922.01.T01:CDS
GTATGCAAGGCCACCTCCTG+AGG 0.686248 8:-79959615 MsG0880046922.01.T01:CDS
TTCCCCATAGGCATAGAAGG+GGG 0.698362 8:+79960347 None:intergenic
GTGGTGGAGGAAATAATATG+GGG 0.726893 8:-79959880 MsG0880046922.01.T01:CDS
GGAAATGGACAGAAACCTGG+TGG 0.762212 8:-79960242 MsG0880046922.01.T01:CDS
GGAGGAGGTTACTTTCAAGG+TGG 0.764262 8:-79959791 MsG0880046922.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATTTTGATTATTGTT+TGG + Chr8:79960324-79960343 None:intergenic 10.0%
!! AAAATCTTACAGAAAATTGA+TGG - Chr8:79960013-79960032 MsG0880046922.01.T01:intron 20.0%
!! GCAAAAAAAATAAAGAAAGA+TGG + Chr8:79959846-79959865 None:intergenic 20.0%
!!! AATGGATTTCAAAAAATGAT+GGG - Chr8:79961210-79961229 MsG0880046922.01.T01:intron 20.0%
!!! ATTTTGATTATTGTTTGGTT+TGG + Chr8:79960319-79960338 None:intergenic 20.0%
!!! TAATGGATTTCAAAAAATGA+TGG - Chr8:79961209-79961228 MsG0880046922.01.T01:intron 20.0%
!!! TTTTGATTATTGTTTGGTTT+GGG + Chr8:79960318-79960337 None:intergenic 20.0%
! AAGGAAAAGAGAGAAATAAA+TGG + Chr8:79959623-79959642 None:intergenic 25.0%
! ACTTGTGATAAATAAAGATC+TGG + Chr8:79959748-79959767 None:intergenic 25.0%
! CTTGTGATAAATAAAGATCT+GGG + Chr8:79959747-79959766 None:intergenic 25.0%
! GTAGTAATCAAAATAACGAT+GGG - Chr8:79961116-79961135 MsG0880046922.01.T01:intron 25.0%
! GTTACTTACTTTATTCCTAT+TGG - Chr8:79959766-79959785 MsG0880046922.01.T01:CDS 25.0%
! TAGTAATCAAAATAACGATG+GGG - Chr8:79961117-79961136 MsG0880046922.01.T01:intron 25.0%
! TGAAATGAAATGAGAATAGA+AGG + Chr8:79959642-79959661 None:intergenic 25.0%
!! CTTAAATTAAGCTTCTGTTT+TGG + Chr8:79960129-79960148 None:intergenic 25.0%
!! GAGTATTTTATGTTCTTGTT+TGG + Chr8:79959688-79959707 None:intergenic 25.0%
!!! AGAAGAATTTTTGAAGATAC+AGG - Chr8:79959799-79959818 MsG0880046922.01.T01:CDS 25.0%
!!! TGATTTTAGTGATGATGAAA+TGG - Chr8:79960692-79960711 MsG0880046922.01.T01:CDS 25.0%
!!! TTGTTTGGTTGAGTTTTATT+TGG + Chr8:79959673-79959692 None:intergenic 25.0%
AAATCAGAATCAAAACCAGA+AGG - Chr8:79960425-79960444 MsG0880046922.01.T01:CDS 30.0%
AACAACTTCAACAGATGAAA+GGG - Chr8:79960547-79960566 MsG0880046922.01.T01:CDS 30.0%
AAGAACATGCAAATTGACAA+TGG - Chr8:79960369-79960388 MsG0880046922.01.T01:CDS 30.0%
AATCAGAATCAAAACCAGAA+GGG - Chr8:79960426-79960445 MsG0880046922.01.T01:CDS 30.0%
AATGTTCAGGCTATGAATAA+TGG - Chr8:79961192-79961211 MsG0880046922.01.T01:CDS 30.0%
AGTAATCAAAATAACGATGG+GGG - Chr8:79961118-79961137 MsG0880046922.01.T01:intron 30.0%
ATGCCAGAAGCTAAAAATAA+TGG - Chr8:79961064-79961083 MsG0880046922.01.T01:intron 30.0%
GGTAGTAATCAAAATAACGA+TGG - Chr8:79961115-79961134 MsG0880046922.01.T01:intron 30.0%
GGTCAACAAATACAAATACA+AGG - Chr8:79960477-79960496 MsG0880046922.01.T01:CDS 30.0%
GGTGATTATAGATCTGAAAA+TGG + Chr8:79959710-79959729 None:intergenic 30.0%
TTAACACCTTTAGCATCTTT+AGG + Chr8:79960648-79960667 None:intergenic 30.0%
TTCTGCATACACAAATAACA+AGG + Chr8:79959941-79959960 None:intergenic 30.0%
! CAAGATCTAGCTCAATTTAA+AGG - Chr8:79960573-79960592 MsG0880046922.01.T01:CDS 30.0%
!! TGATGAGTTTGATGATGAAA+TGG - Chr8:79960755-79960774 MsG0880046922.01.T01:CDS 30.0%
!! TGTGTTGATTAATGAATGAC+AGG - Chr8:79960171-79960190 MsG0880046922.01.T01:CDS 30.0%
AAAGTGAACATACACTGTGA+TGG - Chr8:79959971-79959990 MsG0880046922.01.T01:CDS 35.0%
AACAAGAATGGAGGGAATAA+TGG - Chr8:79961094-79961113 MsG0880046922.01.T01:intron 35.0%
AAGAAAGATGGAGAATGTGA+TGG + Chr8:79959834-79959853 None:intergenic 35.0%
AATAATCAGAATCAAGGTGG+AGG - Chr8:79961023-79961042 MsG0880046922.01.T01:intron 35.0%
ACAACAACAGCAACAGTTAA+TGG - Chr8:79961446-79961465 MsG0880046922.01.T01:five_prime_UTR 35.0%
ACTGATTAACAACGTTGTTC+TGG + Chr8:79960347-79960366 None:intergenic 35.0%
AGAAAGATGGAGAATGTGAT+GGG + Chr8:79959833-79959852 None:intergenic 35.0%
AGCTTCTTGATGAGAACATT+TGG + Chr8:79960258-79960277 None:intergenic 35.0%
AGGTGGAGGTAACAAAATAA+TGG - Chr8:79961037-79961056 MsG0880046922.01.T01:intron 35.0%
ATCAAGAAGCTTGCAAAATC+AGG - Chr8:79960267-79960286 MsG0880046922.01.T01:CDS 35.0%
ATCTGGGCTATAGAGAAAAA+TGG + Chr8:79959731-79959750 None:intergenic 35.0%
ATGCAAATTGACAATGGCAA+AGG - Chr8:79960375-79960394 MsG0880046922.01.T01:CDS 35.0%
CAACAACTTCAACAGATGAA+AGG - Chr8:79960546-79960565 MsG0880046922.01.T01:CDS 35.0%
CAGAATCCTAAAGATGCTAA+AGG - Chr8:79960639-79960658 MsG0880046922.01.T01:CDS 35.0%
CCAGAAGCTAAAAATAATGG+CGG - Chr8:79961067-79961086 MsG0880046922.01.T01:intron 35.0%
CTAAAATCATCCTCATCTTC+AGG + Chr8:79960681-79960700 None:intergenic 35.0%
CTTCTTTACTCATGACCAAT+AGG + Chr8:79959784-79959803 None:intergenic 35.0%
GCTTCTTGATGAGAACATTT+GGG + Chr8:79960257-79960276 None:intergenic 35.0%
TCAAGAAGCTTGCAAAATCA+GGG - Chr8:79960268-79960287 MsG0880046922.01.T01:CDS 35.0%
TGGAGGTAACAAAATAATGG+TGG - Chr8:79961040-79961059 MsG0880046922.01.T01:intron 35.0%
! ATGAAGGGTGGCAATTTTAA+TGG - Chr8:79960876-79960895 MsG0880046922.01.T01:CDS 35.0%
! GGATTTCAAAAAATGATGGG+TGG - Chr8:79961213-79961232 MsG0880046922.01.T01:intron 35.0%
! TGTATTTGTTGACCACCTTT+GGG + Chr8:79960471-79960490 None:intergenic 35.0%
! TTGTATTTGTTGACCACCTT+TGG + Chr8:79960472-79960491 None:intergenic 35.0%
!! AAGAGTCTCTGAAACATAAG+AGG + Chr8:79959595-79959614 None:intergenic 35.0%
!! CATCTTTAGGATTCTGATTC+GGG + Chr8:79960635-79960654 None:intergenic 35.0%
!! GAGTTTGATGATGAAATGGT+TGG - Chr8:79960759-79960778 MsG0880046922.01.T01:CDS 35.0%
!! GCATCTTTAGGATTCTGATT+CGG + Chr8:79960636-79960655 None:intergenic 35.0%
!! TTTCAAAAAATGATGGGTGG+TGG - Chr8:79961216-79961235 MsG0880046922.01.T01:intron 35.0%
AAAGCATGTGAGTAAGGATC+TGG + Chr8:79961597-79961616 None:intergenic 40.0%
AAATAACGATGGGGGTAAGA+AGG - Chr8:79961126-79961145 MsG0880046922.01.T01:intron 40.0%
AACAATAACCAACCCAAAGG+TGG - Chr8:79960456-79960475 MsG0880046922.01.T01:CDS 40.0%
AAGAGGCAAGTTTGAGAGTT+AGG + Chr8:79959578-79959597 None:intergenic 40.0%
AATGGCAATGGAGGAAAGAA+AGG - Chr8:79960981-79961000 MsG0880046922.01.T01:intron 40.0%
ACAGCTTATGAGTGCTATGA+AGG - Chr8:79960860-79960879 MsG0880046922.01.T01:CDS 40.0%
ACTGAGATAGATGCAGAACA+AGG - Chr8:79960204-79960223 MsG0880046922.01.T01:CDS 40.0%
AGTAGTCACTGAGAGAGAAT+GGG + Chr8:79959534-79959553 None:intergenic 40.0%
AGTATGCCTATGAACCGAAT+GGG - Chr8:79961300-79961319 MsG0880046922.01.T01:intron 40.0%
ATTTGATGTGCCTGAAGATG+AGG - Chr8:79960668-79960687 MsG0880046922.01.T01:CDS 40.0%
CAAATTGACAATGGCAAAGG+TGG - Chr8:79960378-79960397 MsG0880046922.01.T01:CDS 40.0%
CAATCTCATCCTGGTAGTAT+GGG - Chr8:79961249-79961268 MsG0880046922.01.T01:intron 40.0%
CAGCTTATGAGTGCTATGAA+GGG - Chr8:79960861-79960880 MsG0880046922.01.T01:CDS 40.0%
CTGAGATAGATGCAGAACAA+GGG - Chr8:79960205-79960224 MsG0880046922.01.T01:CDS 40.0%
GAAGCTAAAAATAATGGCGG+TGG - Chr8:79961070-79961089 MsG0880046922.01.T01:intron 40.0%
GAAGGGGGTTTCATCTTATT+AGG + Chr8:79960792-79960811 None:intergenic 40.0%
GGAAACAATAACCAACCCAA+AGG - Chr8:79960453-79960472 MsG0880046922.01.T01:CDS 40.0%
GGAGGGAATAATCAGAATCA+AGG - Chr8:79961017-79961036 MsG0880046922.01.T01:intron 40.0%
GGATACATGTAATTCACCTC+AGG + Chr8:79961555-79961574 None:intergenic 40.0%
GGGAATAATCAGAATCAAGG+TGG - Chr8:79961020-79961039 MsG0880046922.01.T01:intron 40.0%
GTGCTCACATGATGTTGAAT+GGG - Chr8:79960829-79960848 MsG0880046922.01.T01:CDS 40.0%
GTTCAAATTCACGGCATGAA+TGG - Chr8:79960954-79960973 MsG0880046922.01.T01:CDS 40.0%
TACATGTAATTCACCTCAGG+AGG + Chr8:79961552-79961571 None:intergenic 40.0%
TAGTAGTCACTGAGAGAGAA+TGG + Chr8:79959535-79959554 None:intergenic 40.0%
TCAATCTCATCCTGGTAGTA+TGG - Chr8:79961248-79961267 MsG0880046922.01.T01:intron 40.0%
TTCATAGCACTCATAAGCTG+TGG + Chr8:79960861-79960880 None:intergenic 40.0%
TTCATGCCGTGAATTTGAAC+CGG + Chr8:79960954-79960973 None:intergenic 40.0%
TTTGGGAACACTCCATAACT+CGG + Chr8:79960301-79960320 None:intergenic 40.0%
! ATGAATGGTGGAAATGGCAA+TGG - Chr8:79960969-79960988 MsG0880046922.01.T01:intron 40.0%
! GAAGGTATGTCGATACCAAT+TGG - Chr8:79961144-79961163 MsG0880046922.01.T01:CDS 40.0%
! GTGGTGGAGGAAATAATATG+GGG - Chr8:79961271-79961290 MsG0880046922.01.T01:intron 40.0%
!! AAAGGTGGTGGAAACAACAA+AGG - Chr8:79960393-79960412 MsG0880046922.01.T01:CDS 40.0%
!! AAGGGTGGCAATTTTAATGG+TGG - Chr8:79960879-79960898 MsG0880046922.01.T01:CDS 40.0%
!! GGTGGTGGAGGAAATAATAT+GGG - Chr8:79961270-79961289 MsG0880046922.01.T01:intron 40.0%
!!! AATTTTAATGGTGGTGGTGG+CGG - Chr8:79960888-79960907 MsG0880046922.01.T01:CDS 40.0%
!!! CCGCCATTATTTTTAGCTTC+TGG + Chr8:79961070-79961089 None:intergenic 40.0%
AAACCCCCTTCTATGCCTAT+GGG - Chr8:79960801-79960820 MsG0880046922.01.T01:CDS 45.0%
AAGGATCTGGAGGAGGATAA+GGG + Chr8:79961584-79961603 None:intergenic 45.0%
AAGGGAAGGTCACAGTTTCA+GGG - Chr8:79960223-79960242 MsG0880046922.01.T01:CDS 45.0%
AATCAAAACCAGAAGGGTGG+TGG - Chr8:79960432-79960451 MsG0880046922.01.T01:CDS 45.0%
AATGGAGGAAAGAAAGGTGG+TGG - Chr8:79960987-79961006 MsG0880046922.01.T01:intron 45.0%
AATGGCGGTGGAAACAAGAA+TGG - Chr8:79961082-79961101 MsG0880046922.01.T01:intron 45.0%
AGCAGCCAATGATGTATGCA+AGG - Chr8:79961523-79961542 MsG0880046922.01.T01:five_prime_UTR 45.0%
AGTTAGGAGAGAGAGAATGG+TGG + Chr8:79959562-79959581 None:intergenic 45.0%
ATGTAATTCACCTCAGGAGG+TGG + Chr8:79961549-79961568 None:intergenic 45.0%
ATGTCGATACCAATTGGTGG+CGG - Chr8:79961150-79961169 MsG0880046922.01.T01:CDS 45.0%
ATTCCCCATAGGCATAGAAG+GGG + Chr8:79960808-79960827 None:intergenic 45.0%
ATTGACAATGGCAAAGGTGG+TGG - Chr8:79960381-79960400 MsG0880046922.01.T01:CDS 45.0%
CAAATTCACGGCATGAATGG+TGG - Chr8:79960957-79960976 MsG0880046922.01.T01:CDS 45.0%
CAGAATCAAAACCAGAAGGG+TGG - Chr8:79960429-79960448 MsG0880046922.01.T01:CDS 45.0%
CAGGAATGTTACCACCCATT+CGG + Chr8:79961317-79961336 None:intergenic 45.0%
CATTCCCCATAGGCATAGAA+GGG + Chr8:79960809-79960828 None:intergenic 45.0%
CGGTTCATAGGCATACTCAT+TGG + Chr8:79961297-79961316 None:intergenic 45.0%
CTTATGAGTGCTATGAAGGG+TGG - Chr8:79960864-79960883 MsG0880046922.01.T01:CDS 45.0%
GAGAGTTAGGAGAGAGAGAA+TGG + Chr8:79959565-79959584 None:intergenic 45.0%
GAGTATGCCTATGAACCGAA+TGG - Chr8:79961299-79961318 MsG0880046922.01.T01:intron 45.0%
GATAGATGCAGAACAAGGGA+AGG - Chr8:79960209-79960228 MsG0880046922.01.T01:CDS 45.0%
GGGGGTTTCATCTTATTAGG+TGG + Chr8:79960789-79960808 None:intergenic 45.0%
GGTAACATTCCTGCTGTTCA+AGG - Chr8:79961324-79961343 MsG0880046922.01.T01:intron 45.0%
GGTATGTCGATACCAATTGG+TGG - Chr8:79961147-79961166 MsG0880046922.01.T01:CDS 45.0%
GGTGCTCACATGATGTTGAA+TGG - Chr8:79960828-79960847 MsG0880046922.01.T01:CDS 45.0%
GTAGTCACTGAGAGAGAATG+GGG + Chr8:79959533-79959552 None:intergenic 45.0%
GTTAGGAGAGAGAGAATGGT+GGG + Chr8:79959561-79959580 None:intergenic 45.0%
TAAGGATCTGGAGGAGGATA+AGG + Chr8:79961585-79961604 None:intergenic 45.0%
TATTGTTTCCACCACCCTTC+TGG + Chr8:79960443-79960462 None:intergenic 45.0%
TTACCACCCATTCGGTTCAT+AGG + Chr8:79961309-79961328 None:intergenic 45.0%
TTTGTTGACCACCTTTGGGT+TGG + Chr8:79960467-79960486 None:intergenic 45.0%
! AATGGTGGAAATGGCAATGG+AGG - Chr8:79960972-79960991 MsG0880046922.01.T01:intron 45.0%
! GATGAATCAACGTGCTGCTA+TGG - Chr8:79961479-79961498 MsG0880046922.01.T01:five_prime_UTR 45.0%
! TCATTGGCTGCTGAAATCTC+TGG + Chr8:79961515-79961534 None:intergenic 45.0%
! TCGCTGAAAGCATGTGAGTA+AGG + Chr8:79961603-79961622 None:intergenic 45.0%
!! CAAAAAATGATGGGTGGTGG+AGG - Chr8:79961219-79961238 MsG0880046922.01.T01:intron 45.0%
!! GGGTGGTGGAGGAAATAATA+TGG - Chr8:79961269-79961288 MsG0880046922.01.T01:intron 45.0%
!! GGTGGCAATTTTAATGGTGG+TGG - Chr8:79960882-79960901 MsG0880046922.01.T01:CDS 45.0%
!! TAGGATTCTGATTCGGGTTC+TGG + Chr8:79960629-79960648 None:intergenic 45.0%
!!! GGCAATTTTAATGGTGGTGG+TGG - Chr8:79960885-79960904 MsG0880046922.01.T01:CDS 45.0%
AACCCCCTTCTATGCCTATG+GGG - Chr8:79960802-79960821 MsG0880046922.01.T01:CDS 50.0%
AATGGACAGAAACCTGGTGG+TGG - Chr8:79960912-79960931 MsG0880046922.01.T01:CDS 50.0%
ATGCCTATGAACCGAATGGG+TGG - Chr8:79961303-79961322 MsG0880046922.01.T01:intron 50.0%
ATGTGAGCACCATTCCCCAT+AGG + Chr8:79960819-79960838 None:intergenic 50.0%
CAAGGGAAGGTCACAGTTTC+AGG - Chr8:79960222-79960241 MsG0880046922.01.T01:CDS 50.0%
CAGGGAAACATGCCGAGTTA+TGG - Chr8:79960286-79960305 MsG0880046922.01.T01:CDS 50.0%
CCATTCCCCATAGGCATAGA+AGG + Chr8:79960810-79960829 None:intergenic 50.0%
CCTTCTATGCCTATGGGGAA+TGG - Chr8:79960807-79960826 MsG0880046922.01.T01:CDS 50.0%
GAAACCCCCTTCTATGCCTA+TGG - Chr8:79960800-79960819 MsG0880046922.01.T01:CDS 50.0%
GCATGTGAGTAAGGATCTGG+AGG + Chr8:79961594-79961613 None:intergenic 50.0%
GCGGTGGAAACAAGAATGGA+GGG - Chr8:79961086-79961105 MsG0880046922.01.T01:intron 50.0%
GGAAATGGACAGAAACCTGG+TGG - Chr8:79960909-79960928 MsG0880046922.01.T01:CDS 50.0%
GGATTCCCCTGCATCATTTC+CGG + Chr8:79961402-79961421 None:intergenic 50.0%
GGCAATGGAGGAAAGAAAGG+TGG - Chr8:79960984-79961003 MsG0880046922.01.T01:intron 50.0%
GGTCACAGTTTCAGGGAATG+TGG - Chr8:79960230-79960249 MsG0880046922.01.T01:CDS 50.0%
TCCAGCTGCAATGTCATGTG+AGG - Chr8:79961633-79961652 MsG0880046922.01.T01:five_prime_UTR 50.0%
TCCTGCTGTTCAAGGTCTAC+CGG - Chr8:79961332-79961351 MsG0880046922.01.T01:intron 50.0%
TCTCATCCTGGTAGTATGGG+TGG - Chr8:79961252-79961271 MsG0880046922.01.T01:intron 50.0%
TCTGGAGGAGGATAAGGGTA+AGG + Chr8:79961579-79961598 None:intergenic 50.0%
TGAAGTTGTTGCTGCTGCTG+AGG + Chr8:79960510-79960529 None:intergenic 50.0%
TGTGAGTAAGGATCTGGAGG+AGG + Chr8:79961591-79961610 None:intergenic 50.0%
TTCCCCATAGGCATAGAAGG+GGG + Chr8:79960807-79960826 None:intergenic 50.0%
! CACGGCATGAATGGTGGAAA+TGG - Chr8:79960963-79960982 MsG0880046922.01.T01:intron 50.0%
! GAATCAACGTGCTGCTATGG+TGG - Chr8:79961482-79961501 MsG0880046922.01.T01:five_prime_UTR 50.0%
! GGAGGAGGTTACTTTCAAGG+TGG - Chr8:79961360-79961379 MsG0880046922.01.T01:CDS 50.0%
! GGAGGTTACTTTCAAGGTGG+TGG - Chr8:79961363-79961382 MsG0880046922.01.T01:CDS 50.0%
! GGTGGCCTTGCATACATCAT+TGG + Chr8:79961531-79961550 None:intergenic 50.0%
! GGTTACTTTCAAGGTGGTGG+TGG - Chr8:79961366-79961385 MsG0880046922.01.T01:exon 50.0%
!! AAAATGATGGGTGGTGGAGG+TGG - Chr8:79961222-79961241 MsG0880046922.01.T01:intron 50.0%
!! CCTGTGCCGGTTCAAATTCA+CGG - Chr8:79960945-79960964 MsG0880046922.01.T01:CDS 50.0%
!! TACTTTCAAGGTGGTGGTGG+TGG - Chr8:79961369-79961388 MsG0880046922.01.T01:exon 50.0%
CAGGACCGGAAATGATGCAG+GGG - Chr8:79961394-79961413 MsG0880046922.01.T01:five_prime_UTR 55.0%
CATCCTGGTAGTATGGGTGG+TGG - Chr8:79961255-79961274 MsG0880046922.01.T01:intron 55.0%
CCAGGACCGGAAATGATGCA+GGG - Chr8:79961393-79961412 MsG0880046922.01.T01:five_prime_UTR 55.0%
CCGTGAATTTGAACCGGCAC+AGG + Chr8:79960948-79960967 None:intergenic 55.0%
GGAGGAGGATAAGGGTAAGG+AGG + Chr8:79961576-79961595 None:intergenic 55.0%
GGCGGAAATGGACAGAAACC+TGG - Chr8:79960906-79960925 MsG0880046922.01.T01:CDS 55.0%
GGCGGTGGAAACAAGAATGG+AGG - Chr8:79961085-79961104 MsG0880046922.01.T01:intron 55.0%
TCCAGGACCGGAAATGATGC+AGG - Chr8:79961392-79961411 MsG0880046922.01.T01:five_prime_UTR 55.0%
TGCTGCTGCTGCTGCTGATA+TGG + Chr8:79961423-79961442 None:intergenic 55.0%
! AGGCGGTGGTGGTAATGTTC+AGG - Chr8:79961179-79961198 MsG0880046922.01.T01:CDS 55.0%
! GGAGGAAAGAAAGGTGGTGG+TGG - Chr8:79960990-79961009 MsG0880046922.01.T01:intron 55.0%
! GGCGGAGGAGGTTACTTTCA+AGG - Chr8:79961357-79961376 MsG0880046922.01.T01:CDS 55.0%
! GGTGGTGGTCAATCTCATCC+TGG - Chr8:79961240-79961259 MsG0880046922.01.T01:intron 55.0%
!! AAGAAAGGTGGTGGTGGTGG+TGG - Chr8:79960996-79961015 MsG0880046922.01.T01:intron 55.0%
!! AATGGTGGTGGTGGCGGAAA+TGG - Chr8:79960894-79960913 MsG0880046922.01.T01:CDS 55.0%
!! ATACCAATTGGTGGCGGAGG+TGG - Chr8:79961156-79961175 MsG0880046922.01.T01:CDS 55.0%
!! GGAAAGAAAGGTGGTGGTGG+TGG - Chr8:79960993-79961012 MsG0880046922.01.T01:intron 55.0%
!! TCGATACCAATTGGTGGCGG+AGG - Chr8:79961153-79961172 MsG0880046922.01.T01:CDS 55.0%
!! TTCTGATTCGGGTTCTGGCC+CGG + Chr8:79960624-79960643 None:intergenic 55.0%
AAGTAACCTCCTCCGCCTGC+CGG + Chr8:79961354-79961373 None:intergenic 60.0%
ATGCCGCTGAATCAGCACCC+GGG - Chr8:79960603-79960622 MsG0880046922.01.T01:CDS 60.0%
CCCTGCATCATTTCCGGTCC+TGG + Chr8:79961396-79961415 None:intergenic 60.0%
CCTCCACCACCCATACTACC+AGG + Chr8:79961261-79961280 None:intergenic 60.0%
GATGCCGCTGAATCAGCACC+CGG - Chr8:79960602-79960621 MsG0880046922.01.T01:CDS 60.0%
GCCGGTAGACCTTGAACAGC+AGG + Chr8:79961336-79961355 None:intergenic 60.0%
GCTGTTCAAGGTCTACCGGC+AGG - Chr8:79961336-79961355 MsG0880046922.01.T01:intron 60.0%
GTATGCAAGGCCACCTCCTG+AGG - Chr8:79961536-79961555 MsG0880046922.01.T01:five_prime_UTR 60.0%
GTTCAAGGTCTACCGGCAGG+CGG - Chr8:79961339-79961358 MsG0880046922.01.T01:intron 60.0%
! CCTGGTAGTATGGGTGGTGG+AGG - Chr8:79961258-79961277 MsG0880046922.01.T01:intron 60.0%
!! AAACCTGGTGGTGGTGGTGG+AGG - Chr8:79960921-79960940 MsG0880046922.01.T01:CDS 60.0%
!! AAAGGTGGTGGTGGTGGTGG+AGG - Chr8:79960999-79961018 MsG0880046922.01.T01:intron 60.0%
!! AAGGTGGTGGTGGTGGTGGA+GGG - Chr8:79961000-79961019 MsG0880046922.01.T01:intron 60.0%
!! ATGATGGGTGGTGGAGGTGG+TGG - Chr8:79961225-79961244 MsG0880046922.01.T01:intron 60.0%
!! CAGAAACCTGGTGGTGGTGG+TGG - Chr8:79960918-79960937 MsG0880046922.01.T01:CDS 60.0%
!! GGACAGAAACCTGGTGGTGG+TGG - Chr8:79960915-79960934 MsG0880046922.01.T01:CDS 60.0%
!! TCTGATTCGGGTTCTGGCCC+GGG + Chr8:79960623-79960642 None:intergenic 60.0%
CCTCCACCTCCGCCACCAAT+TGG + Chr8:79961162-79961181 None:intergenic 65.0%
!! ATTGGTGGCGGAGGTGGAGG+CGG - Chr8:79961162-79961181 MsG0880046922.01.T01:CDS 65.0%
!! CAAGGTGGTGGTGGTGGTCC+AGG - Chr8:79961375-79961394 MsG0880046922.01.T01:exon 65.0%
!! CCAATTGGTGGCGGAGGTGG+AGG - Chr8:79961159-79961178 MsG0880046922.01.T01:CDS 65.0%
!! TGGCCCGGGTGCTGATTCAG+CGG + Chr8:79960609-79960628 None:intergenic 65.0%
!! TGGTGGTGGAGGACCTGTGC+CGG - Chr8:79960932-79960951 MsG0880046922.01.T01:CDS 65.0%
!! TGGTGGTGGTGGTCCAGGAC+CGG - Chr8:79961380-79961399 MsG0880046922.01.T01:exon 65.0%
CAAGGTCTACCGGCAGGCGG+AGG - Chr8:79961342-79961361 MsG0880046922.01.T01:intron 70.0%
GGTCCTCCACCACCACCACC+AGG + Chr8:79960927-79960946 None:intergenic 70.0%
GGTCTACCGGCAGGCGGAGG+AGG - Chr8:79961345-79961364 MsG0880046922.01.T01:intron 75.0%
! GGCGGAGGTGGAGGCGGTGG+TGG - Chr8:79961168-79961187 MsG0880046922.01.T01:CDS 80.0%
!!! GGTGGCGGAGGTGGAGGCGG+TGG - Chr8:79961165-79961184 MsG0880046922.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 79959520 79961653 79959520 ID=MsG0880046922.01;Name=MsG0880046922.01
Chr8 mRNA 79959520 79961653 79959520 ID=MsG0880046922.01.T01;Parent=MsG0880046922.01;Name=MsG0880046922.01.T01;_AED=0.48;_eAED=0.48;_QI=271|0.66|0.5|1|1|1|4|0|488
Chr8 exon 79961353 79961653 79961353 ID=MsG0880046922.01.T01:exon:1241;Parent=MsG0880046922.01.T01
Chr8 exon 79961139 79961214 79961139 ID=MsG0880046922.01.T01:exon:1242;Parent=MsG0880046922.01.T01
Chr8 exon 79960129 79960980 79960129 ID=MsG0880046922.01.T01:exon:1243;Parent=MsG0880046922.01.T01
Chr8 exon 79959520 79960028 79959520 ID=MsG0880046922.01.T01:exon:1244;Parent=MsG0880046922.01.T01
Chr8 five_prime_UTR 79961383 79961653 79961383 ID=MsG0880046922.01.T01:five_prime_utr;Parent=MsG0880046922.01.T01
Chr8 CDS 79961353 79961382 79961353 ID=MsG0880046922.01.T01:cds;Parent=MsG0880046922.01.T01
Chr8 CDS 79961139 79961214 79961139 ID=MsG0880046922.01.T01:cds;Parent=MsG0880046922.01.T01
Chr8 CDS 79960129 79960980 79960129 ID=MsG0880046922.01.T01:cds;Parent=MsG0880046922.01.T01
Chr8 CDS 79959520 79960028 79959520 ID=MsG0880046922.01.T01:cds;Parent=MsG0880046922.01.T01
Gene Sequence

>MsG0880046922.01.T01

ATGAGTAAAGAAGAATTTTTGAAGATACAGAAATCTGTTCTAAAAGTGAACATACACTGTGATGGATGTAAACACAAAGTAAAGAAAATCTTACAGAAAATTGATGGAGTATTTACAACTGAGATAGATGCAGAACAAGGGAAGGTCACAGTTTCAGGGAATGTGGACCCAAATGTTCTCATCAAGAAGCTTGCAAAATCAGGGAAACATGCCGAGTTATGGAGTGTTCCCAAACCAAACAATAATCAAAATAATAACCAGAACAACGTTGTTAATCAGTTAAAGAACATGCAAATTGACAATGGCAAAGGTGGTGGAAACAACAAAGGTCAGAATCAAAATCAGAATCAAAACCAGAAGGGTGGTGGAAACAATAACCAACCCAAAGGTGGTCAACAAATACAAATACAAGGACTAAATCCTCAGCAGCAGCAACAACTTCAGCTTCAACAACAGTTGCAACAACTTCAACAGATGAAAGGGTTTCAAGATCTAGCTCAATTTAAAGGCATGAAGATGCCGCTGAATCAGCACCCGGGCCAGAACCCGAATCAGAATCCTAAAGATGCTAAAGGTGTTAAATTTGATGTGCCTGAAGATGAGGATGATTTTAGTGATGATGAAATGGATGATTATGATGACGACGAAGATGATGATGAAGATTTTGATGATGAGTTTGATGATGAAATGGTTGGTTTGCCACCTAATAAGATGAAACCCCCTTCTATGCCTATGGGGAATGGTGCTCACATGATGTTGAATGGGAATCATCCACAGCTTATGAGTGCTATGAAGGGTGGCAATTTTAATGGTGGTGGTGGCGGAAATGGACAGAAACCTGGTGGTGGTGGTGGAGGACCTGTGCCGGTTCAAATTCACGGCATGAATGGTGGAAATGGCAATGGAGGAAAGAAAGGTGGTGGTGGTGGTGGAGGGAATAATCAGAATCAAGGTGGAGAAGGTATGTCGATACCAATTGGTGGCGGAGGTGGAGGCGGTGGTGGTAATGTTCAGGCTATGAATAATGGATTTCAAAAAATGATGGGTGGTGGAGGTGGTGGTCAATCTCATCCTGGTAGTATGGGTGGTGGAGGAAATAATATGGGGCCAATGAGTATGCCTATGAACCGAATGGGTGGTAACATTCCTGCTGTTCAAGGTCTACCGGCAGGCGGAGGAGGTTACTTTCAAGGTGGTGGTGGTGGTCCAGGACCGGAAATGATGCAGGGGAATCCATATCAGCAGCAGCAGCAGCAACAACAACAACAGCAACAGTTAATGGCTGCTGCAATGATGAATCAACGTGCTGCTATGGTGGAAAATGACCAGAGATTTCAGCAGCCAATGATGTATGCAAGGCCACCTCCTGAGGTGAATTACATGTATCCTCCTTACCCTTATCCTCCTCCAGATCCTTACTCACATGCTTTCAGCGATGAGAACACTTCCAGCTGCAATGTCATGTGA

Protein sequence

>MsG0880046922.01.T01

MSKEEFLKIQKSVLKVNIHCDGCKHKVKKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIKKLAKSGKHAELWSVPKPNNNQNNNQNNVVNQLKNMQIDNGKGGGNNKGQNQNQNQNQKGGGNNNQPKGGQQIQIQGLNPQQQQQLQLQQQLQQLQQMKGFQDLAQFKGMKMPLNQHPGQNPNQNPKDAKGVKFDVPEDEDDFSDDEMDDYDDDEDDDEDFDDEFDDEMVGLPPNKMKPPSMPMGNGAHMMLNGNHPQLMSAMKGGNFNGGGGGNGQKPGGGGGGPVPVQIHGMNGGNGNGGKKGGGGGGGNNQNQGGEGMSIPIGGGGGGGGGNVQAMNNGFQKMMGGGGGGQSHPGSMGGGGNNMGPMSMPMNRMGGNIPAVQGLPAGGGGYFQGGGGGPGPEMMQGNPYQQQQQQQQQQQQLMAAAMMNQRAAMVENDQRFQQPMMYARPPPEVNYMYPPYPYPPPDPYSHAFSDENTSSCNVM*