AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0059900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0059900 MtrunA17_Chr1g0159551 93.640 283 18 0 1 283 179 461 0.0 561
Msa0059900 MtrunA17_Chr1g0173121 87.633 283 34 1 1 283 183 464 0.0 523
Msa0059900 MtrunA17_Chr8g0382021 68.881 286 85 3 1 283 206 490 7.48e-146 418
Msa0059900 MtrunA17_Chr7g0232391 39.921 253 142 5 24 270 206 454 2.42e-53 180
Msa0059900 MtrunA17_Chr7g0232411 40.304 263 145 7 12 267 195 452 3.50e-53 179
Msa0059900 MtrunA17_Chr4g0044511 37.546 269 148 7 23 278 240 501 2.00e-51 176
Msa0059900 MtrunA17_Chr8g0336741 37.313 268 159 4 6 268 195 458 2.64e-51 175
Msa0059900 MtrunA17_Chr7g0232331 36.861 274 162 7 12 279 195 463 5.85e-51 174
Msa0059900 MtrunA17_Chr6g0449931 40.435 230 124 3 52 274 237 460 6.38e-51 174
Msa0059900 MtrunA17_Chr8g0336691 36.861 274 158 5 6 270 195 462 6.59e-51 179
Msa0059900 MtrunA17_Chr8g0336691 37.132 272 160 6 6 270 1101 1368 1.39e-49 176
Msa0059900 MtrunA17_Chr8g0336691 34.035 285 147 6 1 270 643 901 4.88e-43 157
Msa0059900 MtrunA17_Chr7g0243871 38.832 291 152 9 2 278 191 469 9.01e-51 174
Msa0059900 MtrunA17_Chr7g0265041 36.201 279 153 6 23 283 219 490 1.25e-50 173
Msa0059900 MtrunA17_Chr7g0265051 35.636 275 155 6 25 283 218 486 1.53e-50 173
Msa0059900 MtrunA17_Chr4g0066151 36.149 296 168 9 1 278 184 476 2.19e-50 172
Msa0059900 MtrunA17_Chr8g0347281 39.837 246 138 4 33 270 218 461 7.64e-50 171
Msa0059900 MtrunA17_Chr8g0336651 36.861 274 160 5 6 270 963 1232 7.94e-50 176
Msa0059900 MtrunA17_Chr8g0336651 36.940 268 160 4 6 268 188 451 2.02e-48 172
Msa0059900 MtrunA17_Chr8g0336651 35.688 269 136 6 6 270 528 763 6.20e-44 159
Msa0059900 MtrunA17_Chr7g0232401 35.740 277 169 4 6 277 191 463 1.29e-49 170
Msa0059900 MtrunA17_Chr4g0066131 35.333 300 175 8 1 283 179 476 1.73e-49 170
Msa0059900 MtrunA17_Chr7g0232341 37.405 262 154 5 24 279 206 463 1.95e-49 170
Msa0059900 MtrunA17_Chr8g0339441 42.180 211 112 2 75 277 217 425 2.60e-49 169
Msa0059900 MtrunA17_Chr8g0347271 39.200 250 142 4 33 274 219 466 2.98e-49 169
Msa0059900 MtrunA17_Chr8g0366391 37.313 268 146 7 23 278 217 474 3.00e-49 169
Msa0059900 MtrunA17_Chr7g0265141 36.496 274 149 6 23 278 216 482 3.61e-49 169
Msa0059900 MtrunA17_Chr6g0464871 40.952 210 109 4 74 283 274 468 5.11e-49 169
Msa0059900 MtrunA17_Chr8g0336731 34.532 278 173 4 6 278 214 487 5.85e-49 169
Msa0059900 MtrunA17_Chr6g0462551 35.424 271 157 6 9 274 200 457 6.30e-49 169
Msa0059900 MtrunA17_Chr1g0153451 36.630 273 159 7 6 271 188 453 1.02e-48 168
Msa0059900 MtrunA17_Chr8g0373301 37.313 268 147 6 13 270 199 455 1.14e-48 167
Msa0059900 MtrunA17_Chr7g0265101 34.892 278 158 6 23 283 217 488 1.21e-48 168
Msa0059900 MtrunA17_Chr8g0339461 41.395 215 116 2 75 281 259 471 1.22e-48 167
Msa0059900 MtrunA17_Chr7g0232311 39.662 237 134 4 49 279 228 461 1.25e-48 167
Msa0059900 MtrunA17_Chr7g0275511 37.262 263 138 6 23 270 214 464 1.29e-48 168
Msa0059900 MtrunA17_Chr4g0044521 36.585 287 158 9 7 278 186 463 1.41e-48 167
Msa0059900 MtrunA17_Chr4g0044501 35.472 265 152 7 23 278 218 472 1.77e-48 167
Msa0059900 MtrunA17_Chr7g0265151 34.354 294 165 7 9 283 201 485 2.78e-48 167
Msa0059900 MtrunA17_Chr8g0339451 41.706 211 113 2 75 277 251 459 2.98e-48 166
Msa0059900 MtrunA17_Chr8g0334861 37.698 252 141 7 41 283 221 465 2.98e-48 166
Msa0059900 MtrunA17_Chr8g0339601 43.204 206 99 3 75 268 118 317 3.15e-48 163
Msa0059900 MtrunA17_Chr8g0339631 36.071 280 153 8 12 277 197 464 3.67e-48 166
Msa0059900 MtrunA17_Chr7g0275681 35.870 276 149 6 23 281 216 480 3.23e-47 164
Msa0059900 MtrunA17_Chr6g0464861 39.713 209 111 4 75 283 262 455 3.72e-47 163
Msa0059900 MtrunA17_Chr7g0243781 36.268 284 161 6 7 278 197 472 1.59e-46 162
Msa0059900 MtrunA17_Chr1g0153461 39.810 211 119 4 75 280 3 210 1.85e-46 155
Msa0059900 MtrunA17_Chr7g0243931 38.869 283 140 10 18 278 216 487 2.34e-46 162
Msa0059900 MtrunA17_Chr8g0334851 35.472 265 157 6 23 279 208 466 3.01e-46 161
Msa0059900 MtrunA17_Chr6g0486251 36.047 258 155 5 24 277 209 460 3.41e-46 161
Msa0059900 MtrunA17_Chr6g0486201 36.047 258 155 5 24 277 209 460 3.41e-46 161
Msa0059900 MtrunA17_Chr4g0060511 36.462 277 145 7 23 278 218 484 5.61e-46 161
Msa0059900 MtrunA17_Chr4g0011051 33.813 278 161 6 23 283 218 489 5.69e-46 161
Msa0059900 MtrunA17_Chr4g0066261 35.172 290 168 8 11 283 197 483 5.75e-46 161
Msa0059900 MtrunA17_Chr4g0066281 35.145 276 160 8 23 283 197 468 6.00e-46 160
Msa0059900 MtrunA17_Chr1g0179901 33.220 295 172 7 6 281 205 493 7.01e-46 161
Msa0059900 MtrunA17_Chr6g0459311 34.496 258 159 4 24 277 216 467 7.74e-46 160
Msa0059900 MtrunA17_Chr7g0243801 38.686 274 139 9 23 278 211 473 8.41e-46 160
Msa0059900 MtrunA17_Chr8g0369341 37.597 258 145 8 25 278 220 465 9.02e-46 160
Msa0059900 MtrunA17_Chr7g0243861 37.589 282 145 8 18 278 213 484 1.00e-45 160
Msa0059900 MtrunA17_Chr4g0066221 35.417 288 165 8 9 278 193 477 1.03e-45 160
Msa0059900 MtrunA17_Chr6g0464841 39.234 209 112 4 75 283 263 456 1.17e-45 159
Msa0059900 MtrunA17_Chr5g0419771 35.766 274 153 6 25 281 245 512 1.41e-45 160
Msa0059900 MtrunA17_Chr5g0419761 37.262 263 143 6 23 268 216 473 1.71e-45 160
Msa0059900 MtrunA17_Chr6g0463851 34.483 290 162 8 19 283 198 484 2.32e-45 159
Msa0059900 MtrunA17_Chr8g0361371 34.340 265 156 6 24 278 211 467 2.63e-45 159
Msa0059900 MtrunA17_Chr7g0243771 38.321 274 140 9 23 278 210 472 2.76e-45 159
Msa0059900 MtrunA17_Chr4g0014061 37.363 273 133 9 23 271 204 462 3.03e-45 159
Msa0059900 MtrunA17_Chr7g0243851 37.050 278 148 8 20 278 170 439 3.11e-45 158
Msa0059900 MtrunA17_Chr2g0294941 37.449 243 136 6 46 273 130 371 3.25e-45 156
Msa0059900 MtrunA17_Chr5g0426401 34.164 281 161 7 10 281 45 310 4.14e-45 154
Msa0059900 MtrunA17_Chr6g0462571 35.798 257 148 5 23 274 210 454 4.50e-45 158
Msa0059900 MtrunA17_Chr8g0335161 36.910 233 142 2 49 277 231 462 4.57e-45 158
Msa0059900 MtrunA17_Chr6g0462531 36.364 220 129 4 59 277 251 460 6.04e-45 157
Msa0059900 MtrunA17_Chr3g0079731 32.374 278 167 6 19 278 203 477 6.45e-45 158
Msa0059900 MtrunA17_Chr5g0440421 35.714 294 167 8 6 283 208 495 1.39e-44 157
Msa0059900 MtrunA17_Chr8g0335141 34.733 262 162 3 24 281 212 468 1.67e-44 157
Msa0059900 MtrunA17_Chr4g0066201 36.162 271 154 7 23 278 205 471 1.69e-44 157
Msa0059900 MtrunA17_Chr7g0243951 36.429 280 150 9 18 278 210 480 1.70e-44 157
Msa0059900 MtrunA17_Chr6g0454221 38.498 213 113 4 66 278 33 227 3.11e-44 152
Msa0059900 MtrunA17_Chr6g0464881 38.696 230 115 5 52 281 251 454 3.67e-44 155
Msa0059900 MtrunA17_Chr6g0463861 32.990 291 178 6 9 283 186 475 3.99e-44 156
Msa0059900 MtrunA17_Chr7g0235051 38.745 271 132 9 23 271 185 443 4.80e-44 155
Msa0059900 MtrunA17_Chr6g0462521 37.255 204 120 3 75 277 250 446 6.40e-44 155
Msa0059900 MtrunA17_Chr3g0078841 38.235 204 112 3 75 278 285 474 7.27e-44 155
Msa0059900 MtrunA17_Chr7g0243681 37.132 272 145 9 23 278 215 476 9.66e-44 155
Msa0059900 MtrunA17_Chr7g0218311 35.052 291 171 8 7 283 199 485 1.02e-43 155
Msa0059900 MtrunA17_Chr2g0294921 36.364 253 145 6 46 283 381 632 1.18e-43 157
Msa0059900 MtrunA17_Chr6g0462541 36.574 216 128 3 59 274 250 456 2.59e-43 154
Msa0059900 MtrunA17_Chr6g0454331 34.457 267 143 6 27 281 232 478 2.82e-43 154
Msa0059900 MtrunA17_Chr5g0401721 36.538 208 124 3 74 281 271 470 2.99e-43 153
Msa0059900 MtrunA17_Chr8g0374941 33.557 298 179 7 4 283 1123 1419 4.33e-43 157
Msa0059900 MtrunA17_Chr8g0374941 34.733 262 154 6 8 253 191 451 1.58e-39 147
Msa0059900 MtrunA17_Chr8g0374941 35.223 247 143 6 23 253 671 916 5.28e-37 139
Msa0059900 MtrunA17_Chr8g0374901 34.247 292 175 7 8 283 190 480 5.11e-43 153
Msa0059900 MtrunA17_Chr6g0454291 34.457 267 143 6 27 281 230 476 5.13e-43 153
Msa0059900 MtrunA17_Chr7g0217881 36.574 216 119 4 66 281 264 461 1.10e-42 152
Msa0059900 MtrunA17_Chr8g0374931 35.968 253 146 6 46 283 232 483 1.36e-42 152
Msa0059900 MtrunA17_Chr6g0454271 31.930 285 160 7 10 281 23 286 2.02e-42 147
Msa0059900 MtrunA17_Chr2g0302991 33.459 266 168 6 23 283 203 464 2.95e-42 150
Msa0059900 MtrunA17_Chr8g0334831 32.847 274 157 7 24 278 210 475 3.03e-42 151
Msa0059900 MtrunA17_Chr4g0042891 36.559 279 162 8 6 278 193 462 3.61e-42 150
Msa0059900 MtrunA17_Chr3g0118701 30.961 281 167 6 9 278 215 479 4.00e-42 150
Msa0059900 MtrunA17_Chr6g0454401 33.673 294 155 9 6 281 209 480 4.38e-42 150
Msa0059900 MtrunA17_Chr6g0453951 31.930 285 160 8 10 281 263 526 4.38e-42 151
Msa0059900 MtrunA17_Chr4g0053501 36.058 208 128 3 74 281 262 464 6.00e-42 150
Msa0059900 MtrunA17_Chr4g0044481 37.681 207 112 4 23 221 207 404 6.24e-42 149
Msa0059900 MtrunA17_Chr6g0454151 30.249 281 170 6 10 281 214 477 8.53e-42 149
Msa0059900 MtrunA17_Chr6g0453961 30.714 280 170 5 10 281 226 489 1.43e-41 149
Msa0059900 MtrunA17_Chr6g0452771 30.714 280 170 5 10 281 216 479 1.46e-41 149
Msa0059900 MtrunA17_Chr5g0420801 33.725 255 158 5 25 278 211 455 1.53e-41 149
Msa0059900 MtrunA17_Chr6g0454121 31.673 281 168 5 9 281 214 478 1.56e-41 149
Msa0059900 MtrunA17_Chr5g0426431 34.164 281 159 8 10 281 214 477 1.59e-41 149
Msa0059900 MtrunA17_Chr3g0118771 30.851 282 168 6 11 281 223 488 2.23e-41 149
Msa0059900 MtrunA17_Chr8g0355221 34.892 278 153 9 23 281 218 486 2.40e-41 149
Msa0059900 MtrunA17_Chr7g0243631 35.943 281 141 8 23 278 217 483 2.41e-41 149
Msa0059900 MtrunA17_Chr4g0066171 33.704 270 162 6 23 278 207 473 3.19e-41 148
Msa0059900 MtrunA17_Chr2g0294931 36.328 256 146 7 43 283 230 483 3.28e-41 148
Msa0059900 MtrunA17_Chr6g0454261 31.481 270 161 5 20 281 226 479 4.13e-41 148
Msa0059900 MtrunA17_Chr5g0423981 36.574 216 119 4 66 281 247 444 4.31e-41 147
Msa0059900 MtrunA17_Chr6g0454301 37.198 207 116 3 75 281 538 730 4.61e-41 150
Msa0059900 MtrunA17_Chr6g0454301 35.065 231 118 5 66 282 32 244 1.76e-35 134
Msa0059900 MtrunA17_Chr6g0454361 30.714 280 170 6 10 281 217 480 5.27e-41 147
Msa0059900 MtrunA17_Chr3g0112761 38.095 210 117 4 73 281 252 449 7.56e-41 147
Msa0059900 MtrunA17_Chr5g0428081 34.058 276 166 6 23 283 207 481 7.85e-41 147
Msa0059900 MtrunA17_Chr3g0118691 30.634 284 170 6 9 281 215 482 9.90e-41 147
Msa0059900 MtrunA17_Chr5g0403641 37.089 213 125 3 54 257 266 478 1.05e-40 147
Msa0059900 MtrunA17_Chr4g0053321 35.071 211 132 3 71 281 274 479 1.08e-40 147
Msa0059900 MtrunA17_Chr7g0243611 37.445 227 122 6 23 239 76 292 1.29e-40 142
Msa0059900 MtrunA17_Chr6g0454211 32.394 284 160 6 10 281 503 766 1.31e-40 149
Msa0059900 MtrunA17_Chr6g0454211 29.508 183 76 5 20 192 96 235 8.46e-16 77.4
Msa0059900 MtrunA17_Chr8g0336331 36.715 207 117 3 75 281 284 476 1.58e-40 146
Msa0059900 MtrunA17_Chr6g0454201 30.605 281 169 6 10 281 217 480 1.87e-40 146
Msa0059900 MtrunA17_Chr5g0412111 34.457 267 147 6 24 281 214 461 2.02e-40 145
Msa0059900 MtrunA17_Chr5g0414331 34.272 213 118 4 75 283 261 455 2.20e-40 145
Msa0059900 MtrunA17_Chr4g0042931 37.209 258 147 7 9 258 190 440 2.23e-40 145
Msa0059900 MtrunA17_Chr5g0410941 33.904 292 174 7 7 283 204 491 2.23e-40 146
Msa0059900 MtrunA17_Chr2g0329111 34.965 286 166 10 9 279 197 477 3.59e-40 145
Msa0059900 MtrunA17_Chr7g0243811 39.048 210 118 3 7 214 172 373 4.71e-40 143
Msa0059900 MtrunA17_Chr1g0207981 32.627 236 142 5 53 281 247 472 4.89e-40 145
Msa0059900 MtrunA17_Chr8g0374971 32.653 294 169 9 17 283 191 482 5.12e-40 145
Msa0059900 MtrunA17_Chr5g0414321 34.597 211 116 4 75 281 259 451 6.23e-40 144
Msa0059900 MtrunA17_Chr6g0454131 32.482 274 153 7 20 281 225 478 6.30e-40 144
Msa0059900 MtrunA17_Chr7g0265111 33.929 280 160 5 21 281 242 515 6.63e-40 145
Msa0059900 MtrunA17_Chr2g0302961 33.582 268 165 7 23 283 206 467 9.27e-40 144
Msa0059900 MtrunA17_Chr7g0243761 34.926 272 134 10 21 265 213 468 1.17e-39 144
Msa0059900 MtrunA17_Chr3g0112771 34.091 264 159 6 20 281 201 451 1.50e-39 143
Msa0059900 MtrunA17_Chr2g0307961 32.707 266 158 6 23 282 219 469 1.59e-39 143
Msa0059900 MtrunA17_Chr8g0370941 34.426 244 128 7 52 270 241 477 2.28e-39 144
Msa0059900 MtrunA17_Chr6g0464921 35.885 209 120 3 74 282 262 456 2.62e-39 142
Msa0059900 MtrunA17_Chr6g0454341 34.300 207 122 3 75 281 285 477 3.03e-39 143
Msa0059900 MtrunA17_Chr3g0118671 29.577 284 173 6 11 283 208 475 3.46e-39 142
Msa0059900 MtrunA17_Chr3g0118721 30.142 282 170 6 11 281 24 289 3.52e-39 139
Msa0059900 MtrunA17_Chr4g0050341 32.609 276 149 7 23 281 235 490 4.53e-39 142
Msa0059900 MtrunA17_Chr7g0243711 36.735 245 126 7 54 278 78 313 6.30e-39 139
Msa0059900 MtrunA17_Chr6g0454141 33.796 216 125 4 66 281 282 479 7.09e-39 142
Msa0059900 MtrunA17_Chr5g0448521 33.333 246 147 7 50 281 225 467 8.04e-39 141
Msa0059900 MtrunA17_Chr2g0278711 32.746 284 165 7 9 281 208 476 9.55e-39 141
Msa0059900 MtrunA17_Chr6g0454181 30.851 282 167 5 10 281 216 479 9.85e-39 141
Msa0059900 MtrunA17_Chr6g0454191 35.648 216 121 4 66 281 283 480 1.08e-38 141
Msa0059900 MtrunA17_Chr3g0118711 29.893 281 172 6 11 281 215 480 1.21e-38 141
Msa0059900 MtrunA17_Chr3g0118661 32.721 272 156 6 9 270 214 468 2.03e-38 140
Msa0059900 MtrunA17_Chr1g0207951 34.742 213 119 4 74 283 915 1110 2.71e-38 143
Msa0059900 MtrunA17_Chr1g0207951 30.072 276 159 8 17 283 322 572 6.27e-34 130
Msa0059900 MtrunA17_Chr8g0350881 33.465 254 152 6 46 283 230 482 3.73e-38 140
Msa0059900 MtrunA17_Chr8g0365811 34.466 206 133 2 76 281 754 957 4.42e-38 142
Msa0059900 MtrunA17_Chr8g0365811 32.367 207 136 3 76 281 272 475 3.62e-32 125
Msa0059900 MtrunA17_Chr4g0072761 34.934 229 129 5 54 282 245 453 4.71e-38 139
Msa0059900 MtrunA17_Chr7g0250001 35.784 204 116 4 75 278 256 444 4.87e-38 139
Msa0059900 MtrunA17_Chr5g0442561 35.102 245 135 9 52 281 237 472 6.07e-38 139
Msa0059900 MtrunA17_Chr8g0359821 35.266 207 120 3 75 281 285 477 6.29e-38 139
Msa0059900 MtrunA17_Chr3g0092641 31.930 285 160 9 10 281 214 477 6.66e-38 139
Msa0059900 MtrunA17_Chr1g0207931 32.627 236 147 5 54 283 270 499 7.32e-38 139
Msa0059900 MtrunA17_Chr5g0442601 34.440 241 142 7 52 281 640 875 1.15e-37 141
Msa0059900 MtrunA17_Chr5g0442601 35.789 190 110 5 52 233 165 350 6.40e-28 113
Msa0059900 MtrunA17_Chr4g0032331 35.124 242 143 7 25 264 205 434 1.45e-37 138
Msa0059900 MtrunA17_Chr3g0098111 34.363 259 146 9 34 281 224 469 1.53e-37 138
Msa0059900 MtrunA17_Chr5g0442521 34.979 243 139 8 52 281 239 475 1.64e-37 138
Msa0059900 MtrunA17_Chr5g0442541 30.742 283 178 8 12 281 188 465 2.32e-37 137
Msa0059900 MtrunA17_Chr6g0454321 35.000 200 116 3 75 274 285 470 2.39e-37 139
Msa0059900 MtrunA17_Chr5g0432731 33.755 237 133 7 52 281 77 296 4.05e-37 133
Msa0059900 MtrunA17_Chr5g0401851 30.612 294 177 8 7 281 198 483 4.75e-37 137
Msa0059900 MtrunA17_Chr3g0122001 40.000 215 125 4 68 281 262 473 5.88e-37 139
Msa0059900 MtrunA17_Chr3g0122001 40.580 207 118 4 76 281 750 952 2.80e-36 137
Msa0059900 MtrunA17_Chr1g0165701 32.734 278 156 9 23 281 218 483 9.23e-37 136
Msa0059900 MtrunA17_Chr5g0431371 35.200 250 121 6 37 282 237 449 9.25e-37 135
Msa0059900 MtrunA17_Chr7g0241781 32.129 249 145 7 34 281 200 425 1.38e-36 135
Msa0059900 MtrunA17_Chr8g0377921 38.049 205 116 3 75 278 266 460 2.36e-36 135
Msa0059900 MtrunA17_Chr7g0249961 33.491 212 126 3 70 281 63 259 3.07e-36 130
Msa0059900 MtrunA17_Chr7g0241801 30.924 249 148 7 34 281 200 425 4.37e-36 133
Msa0059900 MtrunA17_Chr8g0377941 32.727 275 164 6 12 281 203 461 7.89e-36 133
Msa0059900 MtrunA17_Chr5g0442491 34.440 241 141 8 52 281 240 474 9.33e-36 133
Msa0059900 MtrunA17_Chr8g0361411 31.679 262 158 5 25 278 202 450 1.94e-35 132
Msa0059900 MtrunA17_Chr8g0357361 34.951 206 113 4 23 220 61 253 3.09e-35 127
Msa0059900 MtrunA17_Chr5g0412101 37.441 211 110 5 74 281 279 470 6.61e-35 131
Msa0059900 MtrunA17_Chr7g0243911 38.342 193 98 6 76 256 22 205 7.42e-35 125
Msa0059900 MtrunA17_Chr3g0121991 37.900 219 129 5 65 282 334 546 1.10e-34 131
Msa0059900 MtrunA17_Chr1g0207831 34.434 212 118 5 76 283 271 465 1.13e-34 130
Msa0059900 MtrunA17_Chr5g0416741 31.502 273 161 7 23 278 217 480 1.23e-34 130
Msa0059900 MtrunA17_Chr5g0442511 30.290 241 152 6 52 281 258 493 1.24e-34 130
Msa0059900 MtrunA17_Chr7g0249981 33.962 212 125 3 70 281 270 466 1.35e-34 130
Msa0059900 MtrunA17_Chr5g0409591 38.122 181 98 3 76 248 275 449 1.97e-34 130
Msa0059900 MtrunA17_Chr6g0454171 28.723 282 161 6 10 281 58 309 2.76e-34 126
Msa0059900 MtrunA17_Chr8g0355011 33.945 218 125 4 64 281 163 361 3.50e-34 127
Msa0059900 MtrunA17_Chr6g0454351 36.022 186 105 3 96 281 293 464 3.79e-34 129
Msa0059900 MtrunA17_Chr5g0431441 33.898 236 133 5 52 281 247 465 4.08e-34 129
Msa0059900 MtrunA17_Chr5g0431361 35.714 238 128 8 52 282 235 454 4.32e-34 128
Msa0059900 MtrunA17_Chr5g0442581 33.333 243 144 8 52 281 239 476 5.57e-34 129
Msa0059900 MtrunA17_Chr7g0249931 30.282 284 162 10 9 278 219 480 5.88e-34 128
Msa0059900 MtrunA17_Chr1g0207971 32.273 220 125 6 69 283 255 455 7.11e-34 128
Msa0059900 MtrunA17_Chr5g0429711 32.203 236 140 7 52 282 242 462 7.81e-34 128
Msa0059900 MtrunA17_Chr6g0463891 30.769 273 163 7 23 278 218 481 1.12e-33 128
Msa0059900 MtrunA17_Chr7g0218831 32.174 230 130 5 56 279 228 437 1.52e-33 127
Msa0059900 MtrunA17_Chr5g0431421 35.593 236 129 7 52 281 230 448 1.95e-33 126
Msa0059900 MtrunA17_Chr8g0380531 34.762 210 125 4 74 283 262 459 2.07e-33 127
Msa0059900 MtrunA17_Chr5g0393591 31.905 210 116 4 75 283 254 437 2.23e-33 126
Msa0059900 MtrunA17_Chr3g0079711 35.326 184 111 3 102 278 3 185 2.69e-33 120
Msa0059900 MtrunA17_Chr7g0218821 29.044 272 166 7 9 278 201 447 2.99e-33 126
Msa0059900 MtrunA17_Chr3g0106251 33.649 211 121 4 73 281 100 293 4.19e-33 123
Msa0059900 MtrunA17_Chr6g0454371 33.696 184 108 3 98 281 1 170 6.70e-33 119
Msa0059900 MtrunA17_Chr7g0218841 31.739 230 131 5 56 279 229 438 7.53e-33 125
Msa0059900 MtrunA17_Chr5g0431401 34.177 237 133 7 52 282 230 449 9.51e-33 125
Msa0059900 MtrunA17_Chr7g0218791 32.824 262 150 7 9 268 197 434 3.46e-32 123
Msa0059900 MtrunA17_Chr1g0161351 31.250 256 153 7 40 283 255 499 4.91e-32 123
Msa0059900 MtrunA17_Chr5g0429681 37.563 197 111 7 52 242 275 465 5.23e-32 123
Msa0059900 MtrunA17_Chr1g0207861 32.927 246 144 6 48 281 232 468 5.95e-32 123
Msa0059900 MtrunA17_Chr7g0218811 29.778 225 140 4 56 278 238 446 7.68e-32 122
Msa0059900 MtrunA17_Chr5g0412131 35.096 208 119 3 74 281 278 469 7.79e-32 122
Msa0059900 MtrunA17_Chr7g0232351 47.541 122 60 1 75 192 256 377 1.60e-31 120
Msa0059900 MtrunA17_Chr3g0106231 32.258 217 128 4 68 282 253 452 2.22e-31 121
Msa0059900 MtrunA17_Chr8g0336251 30.418 263 145 7 34 283 223 460 8.46e-30 117
Msa0059900 MtrunA17_Chr8g0336321 30.418 263 145 7 34 283 223 460 8.89e-30 117
Msa0059900 MtrunA17_Chr3g0118751 27.402 281 150 6 11 281 208 444 2.13e-29 115
Msa0059900 MtrunA17_Chr5g0448551 40.260 154 77 4 74 224 258 399 2.43e-29 115
Msa0059900 MtrunA17_Chr5g0427571 29.588 267 146 8 34 283 53 294 1.12e-28 111
Msa0059900 MtrunA17_Chr5g0416821 30.037 273 153 9 23 278 219 470 2.58e-28 113
Msa0059900 MtrunA17_Chr4g0072771 31.441 229 137 5 54 282 258 466 2.65e-28 112
Msa0059900 MtrunA17_Chr6g0482061 31.364 220 139 6 53 268 255 466 8.49e-28 111
Msa0059900 MtrunA17_Chr4g0066141 41.104 163 86 4 126 278 186 348 1.21e-27 109
Msa0059900 MtrunA17_Chr2g0278721 29.119 261 158 9 27 281 734 973 2.10e-27 111
Msa0059900 MtrunA17_Chr2g0278721 28.137 263 164 7 27 283 221 464 5.99e-25 104
Msa0059900 MtrunA17_Chr6g0454251 33.846 195 103 5 10 192 213 393 4.59e-27 108
Msa0059900 MtrunA17_Chr5g0431431 34.184 196 104 5 52 246 181 352 1.86e-26 106
Msa0059900 MtrunA17_Chr8g0367221 32.787 183 116 3 77 259 1547 1722 1.93e-26 108
Msa0059900 MtrunA17_Chr8g0367221 32.787 183 116 4 77 259 270 445 2.23e-26 108
Msa0059900 MtrunA17_Chr8g0367221 32.240 183 117 4 77 259 1057 1232 1.40e-25 106
Msa0059900 MtrunA17_Chr7g0231631 29.151 271 152 8 25 278 9 256 2.82e-26 104
Msa0059900 MtrunA17_Chr8g0336261 39.231 130 71 2 98 227 1 122 4.76e-26 99.8
Msa0059900 MtrunA17_Chr6g0466831 32.597 181 103 4 27 201 219 386 9.41e-26 105
Msa0059900 MtrunA17_Chr6g0466841 32.597 181 103 4 27 201 219 386 1.04e-25 105
Msa0059900 MtrunA17_Chr8g0337381 43.802 121 58 4 153 270 1 114 1.26e-25 98.6
Msa0059900 MtrunA17_Chr3g0092031 30.851 188 113 4 78 262 6 179 1.53e-25 100
Msa0059900 MtrunA17_Chr2g0302851 31.383 188 112 4 78 262 270 443 2.76e-25 104
Msa0059900 MtrunA17_Chr4g0069611 33.708 178 105 4 27 201 216 383 2.83e-25 104
Msa0059900 MtrunA17_Chr6g0464091 39.200 125 67 1 77 201 278 393 1.22e-24 102
Msa0059900 MtrunA17_Chr4g0039881 38.710 124 67 1 78 201 246 360 1.25e-24 102
Msa0059900 MtrunA17_Chr2g0278741 29.187 209 127 5 78 283 356 546 5.19e-24 101
Msa0059900 MtrunA17_Chr1g0196851 31.897 232 145 6 27 255 252 473 2.31e-22 96.3
Msa0059900 MtrunA17_Chr6g0454231 37.500 128 73 2 155 281 97 218 7.75e-22 94.7
Msa0059900 MtrunA17_Chr4g0029151 33.161 193 120 5 27 219 220 403 3.92e-21 92.8
Msa0059900 MtrunA17_Chr4g0040711 32.292 192 120 4 28 219 215 396 4.31e-21 92.4
Msa0059900 MtrunA17_Chr7g0243731 52.239 67 32 0 152 218 7 73 2.57e-20 83.2
Msa0059900 MtrunA17_Chr4g0029131 31.163 215 130 5 8 218 194 394 5.21e-20 89.7
Msa0059900 MtrunA17_Chr1g0207881 29.744 195 123 4 99 283 196 386 3.05e-19 86.7
Msa0059900 MtrunA17_Chr4g0040691 31.250 192 122 4 28 219 215 396 4.61e-19 86.7
Msa0059900 MtrunA17_Chr2g0283041 26.778 239 152 6 11 243 195 416 4.67e-19 86.7
Msa0059900 MtrunA17_Chr1g0159561 91.429 35 3 0 249 283 12 46 2.91e-15 68.9
Msa0059900 MtrunA17_Chr2g0319751 27.308 260 169 8 21 277 685 927 5.44e-15 75.1
Msa0059900 MtrunA17_Chr2g0319751 33.071 127 81 3 140 263 291 416 2.39e-12 67.0
Msa0059900 MtrunA17_Chr2g0319731 27.586 232 152 6 32 260 236 454 3.44e-14 72.4
Msa0059900 MtrunA17_Chr2g0319801 28.814 236 152 7 28 260 215 437 5.48e-14 71.6
Msa0059900 MtrunA17_Chr2g0319791 26.087 230 154 6 34 260 221 437 1.47e-13 70.5
Msa0059900 MtrunA17_Chr2g0319761 24.898 245 149 7 19 260 225 437 8.61e-13 68.2
Msa0059900 MtrunA17_Chr8g0334841 36.937 111 58 4 21 126 35 138 9.82e-13 65.1
Msa0059900 MtrunA17_Chr6g0454391 36.458 96 49 2 168 257 11 100 1.96e-12 63.2
Msa0059900 MtrunA17_Chr7g0243721 33.628 113 66 2 23 127 30 141 3.34e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0059900 AT4G34131.1 36.585 287 160 6 7 282 205 480 5.05e-52 177
Msa0059900 AT2G15490.3 34.572 269 159 5 23 282 218 478 4.26e-50 172
Msa0059900 AT2G15490.1 34.672 274 155 5 23 282 218 481 1.09e-49 171
Msa0059900 AT3G53160.1 36.559 279 146 8 23 281 215 482 1.24e-49 171
Msa0059900 AT4G01070.1 36.220 254 152 5 23 270 207 456 1.46e-48 168
Msa0059900 AT2G36780.1 33.916 286 164 9 14 283 214 490 3.71e-48 167
Msa0059900 AT2G15480.1 32.857 280 171 5 12 282 210 481 4.19e-48 167
Msa0059900 AT4G34138.1 34.266 286 157 6 12 282 210 479 3.34e-47 164
Msa0059900 AT1G73880.1 33.208 265 154 5 25 282 219 467 4.02e-47 164
Msa0059900 AT2G36770.1 33.684 285 166 7 14 283 214 490 5.82e-47 164
Msa0059900 AT2G15480.2 32.414 290 169 7 12 282 210 491 7.59e-46 161
Msa0059900 AT4G36770.1 40.541 222 113 6 54 265 235 447 8.38e-46 160
Msa0059900 AT4G34135.1 34.859 284 160 6 12 282 211 482 4.07e-45 159
Msa0059900 AT3G16520.3 32.836 268 169 6 12 278 199 456 4.35e-45 158
Msa0059900 AT3G50740.1 33.784 296 167 8 1 270 170 462 1.14e-44 158
Msa0059900 AT2G36760.1 34.043 282 165 7 5 271 203 478 1.54e-44 157
Msa0059900 AT3G11340.1 37.838 259 148 6 23 281 199 444 1.90e-44 156
Msa0059900 AT3G46670.1 36.641 262 146 6 23 281 204 448 3.04e-44 156
Msa0059900 AT2G36750.1 32.639 288 173 7 11 283 204 485 4.85e-44 156
Msa0059900 AT5G14860.1 35.461 282 155 8 9 283 216 477 5.94e-44 156
Msa0059900 AT2G36800.1 32.867 286 171 6 11 281 208 487 9.92e-44 155
Msa0059900 AT3G16520.2 33.203 256 160 6 12 266 199 444 1.28e-43 154
Msa0059900 AT3G16520.1 33.594 256 159 6 12 266 199 444 1.46e-43 154
Msa0059900 AT5G26310.1 35.361 263 153 6 23 273 201 458 1.78e-43 154
Msa0059900 AT1G10400.1 36.502 263 141 8 23 278 216 459 5.77e-43 153
Msa0059900 AT2G31750.1 37.559 213 117 4 73 283 258 456 2.35e-42 151
Msa0059900 AT2G31750.2 37.559 213 117 4 73 283 258 456 4.68e-42 151
Msa0059900 AT2G29730.1 32.443 262 163 5 23 281 212 462 6.02e-42 150
Msa0059900 AT2G18570.1 37.917 240 136 7 22 253 204 438 8.10e-42 150
Msa0059900 AT1G01420.1 34.201 269 153 8 17 277 202 454 8.41e-42 150
Msa0059900 AT1G01420.2 34.201 269 153 8 17 277 205 457 9.09e-42 150
Msa0059900 AT3G21790.1 32.632 285 171 9 12 283 204 480 1.02e-41 150
Msa0059900 AT5G66690.1 34.100 261 154 5 23 270 201 456 1.43e-41 149
Msa0059900 AT2G23250.1 37.652 247 137 7 40 281 201 435 1.69e-41 148
Msa0059900 AT3G46660.1 39.662 237 116 7 52 281 239 455 1.73e-41 149
Msa0059900 AT1G05680.1 38.537 205 112 3 75 279 260 450 3.44e-41 148
Msa0059900 AT2G36790.1 34.058 276 161 6 23 283 220 489 3.58e-41 149
Msa0059900 AT2G16890.2 31.295 278 173 6 10 283 206 469 3.67e-41 148
Msa0059900 AT1G01390.1 37.946 224 130 4 52 270 237 456 7.56e-41 147
Msa0059900 AT5G05870.1 36.325 234 133 5 53 282 234 455 7.90e-41 147
Msa0059900 AT1G01390.2 37.946 224 130 4 52 270 254 473 1.01e-40 147
Msa0059900 AT5G05860.1 35.484 279 167 5 3 281 182 447 1.22e-40 146
Msa0059900 AT2G31790.1 37.619 210 117 3 74 282 261 457 1.76e-40 146
Msa0059900 AT2G30140.1 36.052 233 130 4 52 282 237 452 1.79e-40 146
Msa0059900 AT2G30140.2 36.052 233 130 4 52 282 236 451 1.86e-40 146
Msa0059900 AT2G18560.1 35.547 256 154 7 22 270 114 365 2.31e-40 144
Msa0059900 AT1G05675.1 38.049 205 113 3 75 279 260 450 3.33e-40 145
Msa0059900 AT5G03490.1 32.677 254 150 5 22 273 219 453 3.78e-40 145
Msa0059900 AT3G46680.1 34.109 258 152 7 23 278 205 446 5.53e-40 144
Msa0059900 AT2G23260.1 37.089 213 122 4 70 282 254 454 9.74e-40 144
Msa0059900 AT1G51210.1 33.761 234 133 5 23 253 215 429 1.16e-39 143
Msa0059900 AT2G43840.2 31.250 288 168 7 7 281 176 446 2.33e-39 143
Msa0059900 AT2G43840.1 35.514 214 124 3 68 281 247 446 3.25e-39 142
Msa0059900 AT5G59590.1 35.135 259 148 7 23 278 205 446 3.31e-39 142
Msa0059900 AT3G21750.1 33.607 244 141 6 52 282 234 469 3.50e-39 143
Msa0059900 AT2G29740.1 33.096 281 172 9 3 278 202 471 4.78e-39 142
Msa0059900 AT2G29710.1 32.950 261 158 6 23 278 211 459 5.53e-39 142
Msa0059900 AT3G46690.1 37.768 233 127 5 56 282 230 450 6.20e-39 142
Msa0059900 AT1G07250.1 35.865 237 133 9 52 281 248 472 6.44e-39 142
Msa0059900 AT5G12890.1 35.249 261 157 9 24 278 224 478 8.96e-39 142
Msa0059900 AT5G59580.1 35.741 263 141 8 23 278 203 444 1.09e-38 141
Msa0059900 AT3G53150.1 40.594 202 107 4 25 218 231 427 1.45e-38 142
Msa0059900 AT2G16890.3 34.906 212 122 4 10 219 206 403 1.75e-38 140
Msa0059900 AT2G30150.1 34.894 235 132 5 52 283 222 438 1.79e-38 140
Msa0059900 AT3G46650.1 35.907 259 144 7 23 277 188 428 2.26e-38 140
Msa0059900 AT3G21760.1 31.488 289 185 6 5 283 197 482 2.88e-38 140
Msa0059900 AT2G30150.2 34.894 235 132 5 52 283 238 454 3.33e-38 140
Msa0059900 AT3G46700.1 36.638 232 129 5 56 281 225 444 3.64e-38 139
Msa0059900 AT1G05560.1 37.021 235 136 6 53 281 223 451 5.31e-38 139
Msa0059900 AT3G46720.1 36.957 230 124 5 54 281 230 440 5.98e-38 139
Msa0059900 AT3G21800.1 30.508 295 184 8 3 283 190 477 7.06e-38 139
Msa0059900 AT1G05560.2 37.021 235 136 6 53 281 273 501 8.65e-38 140
Msa0059900 AT5G38010.1 34.375 256 154 6 23 278 209 450 1.16e-37 138
Msa0059900 AT1G22400.1 29.893 281 170 6 10 279 215 479 1.70e-37 139
Msa0059900 AT5G38040.1 33.594 256 156 5 23 278 205 446 2.55e-37 137
Msa0059900 AT4G15260.1 29.021 286 187 7 6 281 75 354 2.60e-37 135
Msa0059900 AT4G15490.1 31.399 293 170 11 7 283 196 473 3.55e-37 137
Msa0059900 AT4G15480.1 36.792 212 123 5 70 278 272 475 4.40e-37 137
Msa0059900 AT2G43820.1 33.645 214 128 3 68 281 247 446 5.82e-37 136
Msa0059900 AT1G22340.1 29.371 286 170 7 10 281 214 481 1.09e-36 136
Msa0059900 AT4G15280.1 31.381 239 150 5 52 281 240 473 1.14e-36 136
Msa0059900 AT2G29750.1 33.891 239 145 6 47 281 244 473 1.46e-36 136
Msa0059900 AT4G15280.2 31.381 239 150 5 52 281 272 505 1.61e-36 136
Msa0059900 AT3G21560.1 35.681 213 121 5 69 278 270 469 1.78e-36 136
Msa0059900 AT1G07260.1 31.579 266 158 10 23 278 217 468 1.82e-36 135
Msa0059900 AT3G55700.1 32.576 264 153 8 23 281 207 450 1.92e-36 135
Msa0059900 AT1G05530.1 35.135 259 153 7 27 278 201 451 3.67e-36 134
Msa0059900 AT1G78270.1 34.703 219 120 3 52 260 253 458 4.17e-36 135
Msa0059900 AT1G24100.1 34.450 209 124 3 75 283 265 460 6.30e-36 134
Msa0059900 AT1G22380.1 31.765 255 146 6 17 259 219 457 7.36e-36 134
Msa0059900 AT2G26480.1 34.586 266 149 8 23 281 198 445 2.52e-35 132
Msa0059900 AT1G07240.1 35.849 212 122 6 76 281 272 475 3.07e-35 132
Msa0059900 AT5G05880.1 35.407 209 123 4 74 282 253 449 2.92e-34 129
Msa0059900 AT4G15500.1 35.616 219 124 6 64 278 254 459 3.45e-34 129
Msa0059900 AT3G21780.1 29.758 289 184 9 6 282 188 469 1.67e-33 127
Msa0059900 AT5G05900.1 36.493 211 111 4 74 282 259 448 4.16e-33 126
Msa0059900 AT4G15550.1 32.917 240 150 6 43 278 238 470 4.61e-33 126
Msa0059900 AT1G06000.1 32.028 281 175 7 7 281 163 433 7.28e-33 125
Msa0059900 AT1G22360.1 27.719 285 175 8 10 281 211 477 8.51e-33 125
Msa0059900 AT5G17050.1 33.036 224 128 5 49 270 242 445 9.01e-33 125
Msa0059900 AT5G05890.1 33.333 219 124 5 69 282 252 453 3.84e-32 123
Msa0059900 AT2G36970.1 34.322 236 131 7 52 281 253 470 9.35e-32 123
Msa0059900 AT5G65550.1 35.028 177 104 3 77 253 269 434 1.51e-31 122
Msa0059900 AT3G55710.1 33.659 205 124 4 77 281 262 454 9.14e-31 120
Msa0059900 AT5G49690.1 36.979 192 101 7 77 266 266 439 1.69e-30 119
Msa0059900 AT1G22370.1 29.817 218 131 5 10 216 39 245 6.98e-30 115
Msa0059900 AT1G22370.2 29.817 218 131 5 10 216 209 415 8.59e-29 114
Msa0059900 AT1G22360.2 26.667 285 166 9 10 281 211 465 8.70e-29 114
Msa0059900 AT5G17040.2 30.942 223 136 4 49 270 121 326 1.01e-28 112
Msa0059900 AT5G17030.1 31.390 223 135 4 49 270 239 444 1.22e-28 114
Msa0059900 AT3G02100.1 35.749 207 110 5 75 281 276 459 1.38e-28 114
Msa0059900 AT2G28080.1 29.707 239 153 6 42 278 243 468 2.47e-28 113
Msa0059900 AT5G17040.1 30.942 223 136 4 49 270 223 428 2.83e-28 112
Msa0059900 AT1G30530.1 32.536 209 123 4 49 257 236 426 1.07e-27 111
Msa0059900 AT4G14090.1 31.641 256 154 9 27 278 214 452 1.48e-26 108
Msa0059900 AT3G22250.1 32.620 187 104 5 74 250 272 446 3.25e-25 104
Msa0059900 AT2G22590.1 29.870 231 137 6 59 282 255 467 5.57e-24 101
Msa0059900 AT1G64910.1 31.466 232 133 7 20 239 194 411 5.61e-24 100
Msa0059900 AT4G27560.1 31.532 222 129 5 30 239 207 417 1.16e-23 100
Msa0059900 AT4G27570.1 29.644 253 155 7 30 278 207 440 1.93e-23 99.4
Msa0059900 AT5G37950.2 35.393 178 105 6 17 192 167 336 7.52e-23 96.7
Msa0059900 AT5G37950.1 35.393 178 105 6 17 192 173 342 8.02e-23 96.7
Msa0059900 AT5G53990.1 28.448 232 140 6 20 239 194 411 1.59e-21 94.0
Msa0059900 AT1G50580.1 31.651 218 128 6 34 239 204 412 5.28e-19 86.7
Msa0059900 AT5G54010.1 28.378 222 136 5 30 239 207 417 1.02e-18 85.9
Msa0059900 AT5G54060.1 28.740 254 156 8 30 277 224 458 1.61e-18 85.5
Msa0059900 AT3G29630.1 29.545 220 131 6 34 239 205 414 2.13e-18 85.1
Msa0059900 AT3G29630.2 30.857 175 102 3 78 239 220 388 1.12e-17 82.8
Msa0059900 AT1G64920.1 27.888 251 155 8 20 262 194 426 1.99e-17 82.0
Msa0059900 AT2G22930.1 23.830 235 164 5 30 262 201 422 9.41e-14 71.2
Msa0059900 AT4G09500.2 25.322 233 159 6 30 260 201 420 1.34e-13 70.9
Msa0059900 AT4G34135.2 33.962 106 63 2 23 122 222 326 1.68e-12 67.0
Msa0059900 AT4G09500.1 26.344 186 127 4 77 260 218 395 1.85e-12 67.4
Msa0059900 AT4G01070.2 30.827 133 84 4 23 149 207 337 8.92e-12 65.1

Find 80 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGCAAGATAAAGTTTATT+TGG 0.105578 1_2:-17420040 Msa0059900:CDS
CAAATTGAACAGATTGGAAT+TGG 0.238242 1_2:-17420071 Msa0059900:CDS
GTTATCAAAACACAGTTTCT+TGG 0.289861 1_2:+17419771 None:intergenic
TTGGTTACTGCTTCAGATAT+TGG 0.308225 1_2:-17419696 Msa0059900:CDS
ATATTGGGAATGTTGTTAAA+AGG 0.310146 1_2:-17419680 Msa0059900:CDS
TGGGCTTTGTTGTGAGGGAT+TGG 0.311800 1_2:-17419923 Msa0059900:CDS
TCAGTTATATATGTATCTTT+TGG 0.319665 1_2:-17420119 Msa0059900:CDS
TGGTTACTGCTTCAGATATT+GGG 0.331872 1_2:-17419695 Msa0059900:CDS
AAGCAAGATAAAGTTTATTT+GGG 0.345910 1_2:-17420039 Msa0059900:CDS
TTAATCTCCTCAATGCTTAG+AGG 0.357883 1_2:+17420200 None:intergenic
TTGGGCTAAAAGACATGAAT+TGG 0.369394 1_2:-17419715 Msa0059900:CDS
GGGCTTTGTTGTGAGGGATT+GGG 0.369486 1_2:-17419922 Msa0059900:CDS
CCCCATTGAAATGCTCTCTA+AGG 0.373079 1_2:+17419830 None:intergenic
TTCTCTATCAACTCCAAGTA+AGG 0.388992 1_2:+17420266 None:intergenic
TGGAGTTTCTCGTATGGAAA+TGG 0.396766 1_2:-17419574 Msa0059900:CDS
TTCAATTTGTTCCTCTGTCA+AGG 0.398300 1_2:+17420085 None:intergenic
TGCATAGGCCATGCTGCTAT+TGG 0.399298 1_2:+17419804 None:intergenic
ATAACACAAGTGTTAAAGAT+TGG 0.405924 1_2:-17419753 Msa0059900:CDS
GAATGTTGTTAAAAGGTTGA+TGG 0.417402 1_2:-17419673 Msa0059900:CDS
AAAAGAGGTGAACTTTCAAA+AGG 0.418258 1_2:-17419969 Msa0059900:CDS
CTCAATGCTTAGAGGGTTGA+AGG 0.419760 1_2:+17420208 None:intergenic
CCATCATGAAATCAACGAAT+TGG 0.422221 1_2:+17420354 None:intergenic
GGGTTTGAAGAGAGAGTTGA+AGG 0.426802 1_2:-17419948 Msa0059900:CDS
CTCATAAACCCTCCCGTTGA+AGG 0.430937 1_2:+17419873 None:intergenic
ACAAGTGTTAAAGATTGGTT+TGG 0.437278 1_2:-17419748 Msa0059900:CDS
TGATTTCATGATGGCTCAAA+AGG 0.437813 1_2:-17420345 Msa0059900:CDS
TACCTTAGAGAGCATTTCAA+TGG 0.441839 1_2:-17419832 Msa0059900:CDS
GAGGAACAAATTGAACAGAT+TGG 0.444945 1_2:-17420077 Msa0059900:CDS
GAAGAGAGAGTTGAAGGAAT+GGG 0.453238 1_2:-17419942 Msa0059900:CDS
GGTGGCTTAGAATTTCCAAC+TGG 0.456955 1_2:+17419895 None:intergenic
TTGGTTTGGTTGTGAAGGAT+TGG 0.457697 1_2:-17419734 Msa0059900:CDS
ACCTTAGAGAGCATTTCAAT+GGG 0.461716 1_2:-17419831 Msa0059900:CDS
TGGTTTGGTTGTGAAGGATT+GGG 0.465003 1_2:-17419733 Msa0059900:CDS
AAATGTTGTTGGTACGTCAA+TGG 0.466486 1_2:-17419604 Msa0059900:CDS
AATTCTGTGAATTCAGTAAT+GGG 0.469253 1_2:-17420322 Msa0059900:CDS
AAATTGAACAGATTGGAATT+GGG 0.470378 1_2:-17420070 Msa0059900:CDS
GGAGATTAAGAAAGATTCAA+AGG 0.471891 1_2:-17420186 Msa0059900:CDS
ATTCTAAGCCACCCTTCAAC+GGG 0.473457 1_2:-17419885 Msa0059900:CDS
TCACTTGCAATAAGAAGCAC+TGG 0.478475 1_2:-17420241 Msa0059900:CDS
CCAATTCGTTGATTTCATGA+TGG 0.484394 1_2:-17420354 Msa0059900:CDS
GAGATTAAGAAAGATTCAAA+GGG 0.491794 1_2:-17420185 Msa0059900:CDS
TGAAGAGAGAGTTGAAGGAA+TGG 0.495173 1_2:-17419943 Msa0059900:CDS
TCAAAACACAGTTTCTTGGC+TGG 0.496189 1_2:+17419775 None:intergenic
CAATAAGAAGCACTGGGCAG+TGG 0.496638 1_2:-17420234 Msa0059900:CDS
AGTAATCGAAGGTCCTTACT+TGG 0.505818 1_2:-17420279 Msa0059900:CDS
AATTCTAAGCCACCCTTCAA+CGG 0.516902 1_2:-17419886 Msa0059900:CDS
AATAAGAAGCACTGGGCAGT+GGG 0.521320 1_2:-17420233 Msa0059900:CDS
GTGTTGAGAGATGCTGATAA+AGG 0.522956 1_2:-17420017 Msa0059900:CDS
AGGAATGGGCTTTGTTGTGA+GGG 0.524244 1_2:-17419928 Msa0059900:CDS
GAGGGATTGGGCACCCCAGT+TGG 0.524518 1_2:-17419910 Msa0059900:CDS
AAAGAGGTGAACTTTCAAAA+GGG 0.535280 1_2:-17419968 Msa0059900:CDS
GAATTCTGTGAATTCAGTAA+TGG 0.537692 1_2:-17420323 Msa0059900:CDS
ATTGATGTTCCTTCTATGGA+AGG 0.543815 1_2:-17420389 None:intergenic
TGAAGGTGGAGTTTCTCGTA+TGG 0.545785 1_2:-17419580 Msa0059900:CDS
TAATCTCCTCAATGCTTAGA+GGG 0.548293 1_2:+17420201 None:intergenic
GGTTTATGAGTCATTGTGGA+TGG 0.552414 1_2:-17419860 Msa0059900:CDS
AAGGAATGGGCTTTGTTGTG+AGG 0.555877 1_2:-17419929 Msa0059900:CDS
TCATAAACCCTCCCGTTGAA+GGG 0.569046 1_2:+17419874 None:intergenic
AAAGATTGGTTTGGTTGTGA+AGG 0.569411 1_2:-17419739 Msa0059900:CDS
AAAGGGTAGGCACTCATGCA+TGG 0.576716 1_2:-17420168 Msa0059900:CDS
CTAAGCCACCCTTCAACGGG+AGG 0.589679 1_2:-17419882 Msa0059900:CDS
CTTCAACCCTCTAAGCATTG+AGG 0.593502 1_2:-17420207 Msa0059900:CDS
GTAGGCACTCATGCATGGAA+TGG 0.594615 1_2:-17420163 Msa0059900:CDS
CTTGGCTGGTCAGAATGCAT+AGG 0.594768 1_2:+17419789 None:intergenic
TTAAGAAAGATTCAAAGGGT+AGG 0.596481 1_2:-17420181 Msa0059900:CDS
TAAGCCACCCTTCAACGGGA+GGG 0.603660 1_2:-17419881 Msa0059900:CDS
CTTAGAGAGCATTTCAATGG+GGG 0.614405 1_2:-17419829 Msa0059900:CDS
GGAGGGTTTATGAGTCATTG+TGG 0.620673 1_2:-17419864 Msa0059900:CDS
GTTGGTACGTCAATGGATGA+AGG 0.624718 1_2:-17419597 Msa0059900:CDS
TCAATGCTTAGAGGGTTGAA+GGG 0.633942 1_2:+17420209 None:intergenic
TAAACCCTCCCGTTGAAGGG+TGG 0.642254 1_2:+17419877 None:intergenic
CACTTGCAATAAGAAGCACT+GGG 0.643775 1_2:-17420240 Msa0059900:CDS
GTGGCTTAGAATTTCCAACT+GGG 0.655159 1_2:+17419896 None:intergenic
AGGTTGATGGAGACAACAGA+AGG 0.666265 1_2:-17419660 Msa0059900:CDS
TGGCTTAGAATTTCCAACTG+GGG 0.674557 1_2:+17419897 None:intergenic
AACAACAACAACCTTGACAG+AGG 0.675849 1_2:-17420096 Msa0059900:CDS
AATACAAGCAGAGTAATCGA+AGG 0.676316 1_2:-17420290 Msa0059900:CDS
CCTTAGAGAGCATTTCAATG+GGG 0.702720 1_2:-17419830 Msa0059900:CDS
GGTACGTCAATGGATGAAGG+TGG 0.707930 1_2:-17419594 Msa0059900:CDS
ATAAGAAGCACTGGGCAGTG+GGG 0.711121 1_2:-17420232 Msa0059900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAACTTAAAAATGTTGT+TGG - chr1_2:17420304-17420323 Msa0059900:CDS 15.0%
!! ATAAAACTTAAAAATGTTGT+TGG - chr1_2:17420304-17420323 Msa0059900:CDS 15.0%
!!! TCAGTTATATATGTATCTTT+TGG - chr1_2:17419800-17419819 Msa0059900:CDS 20.0%
!! AAAGCAAGATAAAGTTTATT+TGG - chr1_2:17419879-17419898 Msa0059900:CDS 20.0%
!! AAGCAAGATAAAGTTTATTT+GGG - chr1_2:17419880-17419899 Msa0059900:CDS 20.0%
!! ACATCTTTGATAAAAATGAA+GGG - chr1_2:17419927-17419946 Msa0059900:CDS 20.0%
!!! TCAGTTATATATGTATCTTT+TGG - chr1_2:17419800-17419819 Msa0059900:CDS 20.0%
!! AAAGCAAGATAAAGTTTATT+TGG - chr1_2:17419879-17419898 Msa0059900:CDS 20.0%
!! AAGCAAGATAAAGTTTATTT+GGG - chr1_2:17419880-17419899 Msa0059900:CDS 20.0%
!! ACATCTTTGATAAAAATGAA+GGG - chr1_2:17419927-17419946 Msa0059900:CDS 20.0%
! AATTCTGTGAATTCAGTAAT+GGG - chr1_2:17419597-17419616 Msa0059900:CDS 25.0%
! GAGATTAAGAAAGATTCAAA+GGG - chr1_2:17419734-17419753 Msa0059900:CDS 25.0%
! AAATTGAACAGATTGGAATT+GGG - chr1_2:17419849-17419868 Msa0059900:CDS 25.0%
! GACATCTTTGATAAAAATGA+AGG - chr1_2:17419926-17419945 Msa0059900:CDS 25.0%
! ATAACACAAGTGTTAAAGAT+TGG - chr1_2:17420166-17420185 Msa0059900:CDS 25.0%
! ATATTGGGAATGTTGTTAAA+AGG - chr1_2:17420239-17420258 Msa0059900:CDS 25.0%
! AATTCTGTGAATTCAGTAAT+GGG - chr1_2:17419597-17419616 Msa0059900:CDS 25.0%
! GAGATTAAGAAAGATTCAAA+GGG - chr1_2:17419734-17419753 Msa0059900:CDS 25.0%
! AAATTGAACAGATTGGAATT+GGG - chr1_2:17419849-17419868 Msa0059900:CDS 25.0%
! GACATCTTTGATAAAAATGA+AGG - chr1_2:17419926-17419945 Msa0059900:CDS 25.0%
! ATAACACAAGTGTTAAAGAT+TGG - chr1_2:17420166-17420185 Msa0059900:CDS 25.0%
! ATATTGGGAATGTTGTTAAA+AGG - chr1_2:17420239-17420258 Msa0059900:CDS 25.0%
GAATTCTGTGAATTCAGTAA+TGG - chr1_2:17419596-17419615 Msa0059900:CDS 30.0%
GGAGATTAAGAAAGATTCAA+AGG - chr1_2:17419733-17419752 Msa0059900:CDS 30.0%
TTAAGAAAGATTCAAAGGGT+AGG - chr1_2:17419738-17419757 Msa0059900:CDS 30.0%
CAAATTGAACAGATTGGAAT+TGG - chr1_2:17419848-17419867 Msa0059900:CDS 30.0%
GATAAAAATGAAGGGAAAAG+AGG - chr1_2:17419935-17419954 Msa0059900:CDS 30.0%
AAAAGAGGTGAACTTTCAAA+AGG - chr1_2:17419950-17419969 Msa0059900:CDS 30.0%
AAAGAGGTGAACTTTCAAAA+GGG - chr1_2:17419951-17419970 Msa0059900:CDS 30.0%
GTTATCAAAACACAGTTTCT+TGG + chr1_2:17420151-17420170 None:intergenic 30.0%
! ACAAGTGTTAAAGATTGGTT+TGG - chr1_2:17420171-17420190 Msa0059900:CDS 30.0%
GAATGTTGTTAAAAGGTTGA+TGG - chr1_2:17420246-17420265 Msa0059900:CDS 30.0%
GAATTCTGTGAATTCAGTAA+TGG - chr1_2:17419596-17419615 Msa0059900:CDS 30.0%
GGAGATTAAGAAAGATTCAA+AGG - chr1_2:17419733-17419752 Msa0059900:CDS 30.0%
TTAAGAAAGATTCAAAGGGT+AGG - chr1_2:17419738-17419757 Msa0059900:CDS 30.0%
CAAATTGAACAGATTGGAAT+TGG - chr1_2:17419848-17419867 Msa0059900:CDS 30.0%
GATAAAAATGAAGGGAAAAG+AGG - chr1_2:17419935-17419954 Msa0059900:CDS 30.0%
AAAAGAGGTGAACTTTCAAA+AGG - chr1_2:17419950-17419969 Msa0059900:CDS 30.0%
AAAGAGGTGAACTTTCAAAA+GGG - chr1_2:17419951-17419970 Msa0059900:CDS 30.0%
GTTATCAAAACACAGTTTCT+TGG + chr1_2:17420151-17420170 None:intergenic 30.0%
! ACAAGTGTTAAAGATTGGTT+TGG - chr1_2:17420171-17420190 Msa0059900:CDS 30.0%
GAATGTTGTTAAAAGGTTGA+TGG - chr1_2:17420246-17420265 Msa0059900:CDS 30.0%
CCATCATGAAATCAACGAAT+TGG + chr1_2:17419568-17419587 None:intergenic 35.0%
!! CCAATTCGTTGATTTCATGA+TGG - chr1_2:17419565-17419584 Msa0059900:CDS 35.0%
TGATTTCATGATGGCTCAAA+AGG - chr1_2:17419574-17419593 Msa0059900:CDS 35.0%
AATACAAGCAGAGTAATCGA+AGG - chr1_2:17419629-17419648 Msa0059900:CDS 35.0%
TTCTCTATCAACTCCAAGTA+AGG + chr1_2:17419656-17419675 None:intergenic 35.0%
TAATCTCCTCAATGCTTAGA+GGG + chr1_2:17419721-17419740 None:intergenic 35.0%
TTAATCTCCTCAATGCTTAG+AGG + chr1_2:17419722-17419741 None:intergenic 35.0%
! TTCAATTTGTTCCTCTGTCA+AGG + chr1_2:17419837-17419856 None:intergenic 35.0%
GAGGAACAAATTGAACAGAT+TGG - chr1_2:17419842-17419861 Msa0059900:CDS 35.0%
!! TACCTTAGAGAGCATTTCAA+TGG - chr1_2:17420087-17420106 Msa0059900:CDS 35.0%
!! ACCTTAGAGAGCATTTCAAT+GGG - chr1_2:17420088-17420107 Msa0059900:CDS 35.0%
!! AAAGATTGGTTTGGTTGTGA+AGG - chr1_2:17420180-17420199 Msa0059900:CDS 35.0%
TTGGGCTAAAAGACATGAAT+TGG - chr1_2:17420204-17420223 Msa0059900:CDS 35.0%
TTGGTTACTGCTTCAGATAT+TGG - chr1_2:17420223-17420242 Msa0059900:CDS 35.0%
TGGTTACTGCTTCAGATATT+GGG - chr1_2:17420224-17420243 Msa0059900:CDS 35.0%
AAATGTTGTTGGTACGTCAA+TGG - chr1_2:17420315-17420334 Msa0059900:CDS 35.0%
CCATCATGAAATCAACGAAT+TGG + chr1_2:17419568-17419587 None:intergenic 35.0%
!! CCAATTCGTTGATTTCATGA+TGG - chr1_2:17419565-17419584 Msa0059900:CDS 35.0%
TGATTTCATGATGGCTCAAA+AGG - chr1_2:17419574-17419593 Msa0059900:CDS 35.0%
AATACAAGCAGAGTAATCGA+AGG - chr1_2:17419629-17419648 Msa0059900:CDS 35.0%
TTCTCTATCAACTCCAAGTA+AGG + chr1_2:17419656-17419675 None:intergenic 35.0%
TAATCTCCTCAATGCTTAGA+GGG + chr1_2:17419721-17419740 None:intergenic 35.0%
TTAATCTCCTCAATGCTTAG+AGG + chr1_2:17419722-17419741 None:intergenic 35.0%
! TTCAATTTGTTCCTCTGTCA+AGG + chr1_2:17419837-17419856 None:intergenic 35.0%
GAGGAACAAATTGAACAGAT+TGG - chr1_2:17419842-17419861 Msa0059900:CDS 35.0%
!! TACCTTAGAGAGCATTTCAA+TGG - chr1_2:17420087-17420106 Msa0059900:CDS 35.0%
!! ACCTTAGAGAGCATTTCAAT+GGG - chr1_2:17420088-17420107 Msa0059900:CDS 35.0%
!! AAAGATTGGTTTGGTTGTGA+AGG - chr1_2:17420180-17420199 Msa0059900:CDS 35.0%
TTGGGCTAAAAGACATGAAT+TGG - chr1_2:17420204-17420223 Msa0059900:CDS 35.0%
TTGGTTACTGCTTCAGATAT+TGG - chr1_2:17420223-17420242 Msa0059900:CDS 35.0%
TGGTTACTGCTTCAGATATT+GGG - chr1_2:17420224-17420243 Msa0059900:CDS 35.0%
AAATGTTGTTGGTACGTCAA+TGG - chr1_2:17420315-17420334 Msa0059900:CDS 35.0%
AGTAATCGAAGGTCCTTACT+TGG - chr1_2:17419640-17419659 Msa0059900:CDS 40.0%
! TCACTTGCAATAAGAAGCAC+TGG - chr1_2:17419678-17419697 Msa0059900:CDS 40.0%
!! CACTTGCAATAAGAAGCACT+GGG - chr1_2:17419679-17419698 Msa0059900:CDS 40.0%
TCAATGCTTAGAGGGTTGAA+GGG + chr1_2:17419713-17419732 None:intergenic 40.0%
AACAACAACAACCTTGACAG+AGG - chr1_2:17419823-17419842 Msa0059900:CDS 40.0%
GTGTTGAGAGATGCTGATAA+AGG - chr1_2:17419902-17419921 Msa0059900:CDS 40.0%
TGAAGAGAGAGTTGAAGGAA+TGG - chr1_2:17419976-17419995 Msa0059900:CDS 40.0%
GAAGAGAGAGTTGAAGGAAT+GGG - chr1_2:17419977-17419996 Msa0059900:CDS 40.0%
TGGCTTAGAATTTCCAACTG+GGG + chr1_2:17420025-17420044 None:intergenic 40.0%
GTGGCTTAGAATTTCCAACT+GGG + chr1_2:17420026-17420045 None:intergenic 40.0%
AATTCTAAGCCACCCTTCAA+CGG - chr1_2:17420033-17420052 Msa0059900:CDS 40.0%
GGTTTATGAGTCATTGTGGA+TGG - chr1_2:17420059-17420078 Msa0059900:CDS 40.0%
!! CCTTAGAGAGCATTTCAATG+GGG - chr1_2:17420089-17420108 Msa0059900:CDS 40.0%
!! CTTAGAGAGCATTTCAATGG+GGG - chr1_2:17420090-17420109 Msa0059900:CDS 40.0%
TCAAAACACAGTTTCTTGGC+TGG + chr1_2:17420147-17420166 None:intergenic 40.0%
!! TTGGTTTGGTTGTGAAGGAT+TGG - chr1_2:17420185-17420204 Msa0059900:CDS 40.0%
!! TGGTTTGGTTGTGAAGGATT+GGG - chr1_2:17420186-17420205 Msa0059900:CDS 40.0%
TGGAGTTTCTCGTATGGAAA+TGG - chr1_2:17420345-17420364 Msa0059900:CDS 40.0%
AGTAATCGAAGGTCCTTACT+TGG - chr1_2:17419640-17419659 Msa0059900:CDS 40.0%
! TCACTTGCAATAAGAAGCAC+TGG - chr1_2:17419678-17419697 Msa0059900:CDS 40.0%
!! CACTTGCAATAAGAAGCACT+GGG - chr1_2:17419679-17419698 Msa0059900:CDS 40.0%
TCAATGCTTAGAGGGTTGAA+GGG + chr1_2:17419713-17419732 None:intergenic 40.0%
AACAACAACAACCTTGACAG+AGG - chr1_2:17419823-17419842 Msa0059900:CDS 40.0%
GTGTTGAGAGATGCTGATAA+AGG - chr1_2:17419902-17419921 Msa0059900:CDS 40.0%
TGAAGAGAGAGTTGAAGGAA+TGG - chr1_2:17419976-17419995 Msa0059900:CDS 40.0%
GAAGAGAGAGTTGAAGGAAT+GGG - chr1_2:17419977-17419996 Msa0059900:CDS 40.0%
TGGCTTAGAATTTCCAACTG+GGG + chr1_2:17420025-17420044 None:intergenic 40.0%
GTGGCTTAGAATTTCCAACT+GGG + chr1_2:17420026-17420045 None:intergenic 40.0%
AATTCTAAGCCACCCTTCAA+CGG - chr1_2:17420033-17420052 Msa0059900:CDS 40.0%
GGTTTATGAGTCATTGTGGA+TGG - chr1_2:17420059-17420078 Msa0059900:CDS 40.0%
!! CCTTAGAGAGCATTTCAATG+GGG - chr1_2:17420089-17420108 Msa0059900:CDS 40.0%
!! CTTAGAGAGCATTTCAATGG+GGG - chr1_2:17420090-17420109 Msa0059900:CDS 40.0%
TCAAAACACAGTTTCTTGGC+TGG + chr1_2:17420147-17420166 None:intergenic 40.0%
!! TTGGTTTGGTTGTGAAGGAT+TGG - chr1_2:17420185-17420204 Msa0059900:CDS 40.0%
!! TGGTTTGGTTGTGAAGGATT+GGG - chr1_2:17420186-17420205 Msa0059900:CDS 40.0%
TGGAGTTTCTCGTATGGAAA+TGG - chr1_2:17420345-17420364 Msa0059900:CDS 40.0%
!! AATAAGAAGCACTGGGCAGT+GGG - chr1_2:17419686-17419705 Msa0059900:CDS 45.0%
CTCAATGCTTAGAGGGTTGA+AGG + chr1_2:17419714-17419733 None:intergenic 45.0%
! CTTCAACCCTCTAAGCATTG+AGG - chr1_2:17419712-17419731 Msa0059900:CDS 45.0%
GGGTTTGAAGAGAGAGTTGA+AGG - chr1_2:17419971-17419990 Msa0059900:CDS 45.0%
!! AAGGAATGGGCTTTGTTGTG+AGG - chr1_2:17419990-17420009 Msa0059900:CDS 45.0%
!! AGGAATGGGCTTTGTTGTGA+GGG - chr1_2:17419991-17420010 Msa0059900:CDS 45.0%
GGTGGCTTAGAATTTCCAAC+TGG + chr1_2:17420027-17420046 None:intergenic 45.0%
ATTCTAAGCCACCCTTCAAC+GGG - chr1_2:17420034-17420053 Msa0059900:CDS 45.0%
TCATAAACCCTCCCGTTGAA+GGG + chr1_2:17420048-17420067 None:intergenic 45.0%
GGAGGGTTTATGAGTCATTG+TGG - chr1_2:17420055-17420074 Msa0059900:CDS 45.0%
CCCCATTGAAATGCTCTCTA+AGG + chr1_2:17420092-17420111 None:intergenic 45.0%
!! AGGTTGATGGAGACAACAGA+AGG - chr1_2:17420259-17420278 Msa0059900:CDS 45.0%
GTTGGTACGTCAATGGATGA+AGG - chr1_2:17420322-17420341 Msa0059900:CDS 45.0%
TGAAGGTGGAGTTTCTCGTA+TGG - chr1_2:17420339-17420358 Msa0059900:CDS 45.0%
!! AATAAGAAGCACTGGGCAGT+GGG - chr1_2:17419686-17419705 Msa0059900:CDS 45.0%
CTCAATGCTTAGAGGGTTGA+AGG + chr1_2:17419714-17419733 None:intergenic 45.0%
! CTTCAACCCTCTAAGCATTG+AGG - chr1_2:17419712-17419731 Msa0059900:CDS 45.0%
GGGTTTGAAGAGAGAGTTGA+AGG - chr1_2:17419971-17419990 Msa0059900:CDS 45.0%
!! AAGGAATGGGCTTTGTTGTG+AGG - chr1_2:17419990-17420009 Msa0059900:CDS 45.0%
!! AGGAATGGGCTTTGTTGTGA+GGG - chr1_2:17419991-17420010 Msa0059900:CDS 45.0%
GGTGGCTTAGAATTTCCAAC+TGG + chr1_2:17420027-17420046 None:intergenic 45.0%
ATTCTAAGCCACCCTTCAAC+GGG - chr1_2:17420034-17420053 Msa0059900:CDS 45.0%
TCATAAACCCTCCCGTTGAA+GGG + chr1_2:17420048-17420067 None:intergenic 45.0%
GGAGGGTTTATGAGTCATTG+TGG - chr1_2:17420055-17420074 Msa0059900:CDS 45.0%
CCCCATTGAAATGCTCTCTA+AGG + chr1_2:17420092-17420111 None:intergenic 45.0%
!! AGGTTGATGGAGACAACAGA+AGG - chr1_2:17420259-17420278 Msa0059900:CDS 45.0%
GTTGGTACGTCAATGGATGA+AGG - chr1_2:17420322-17420341 Msa0059900:CDS 45.0%
TGAAGGTGGAGTTTCTCGTA+TGG - chr1_2:17420339-17420358 Msa0059900:CDS 45.0%
!! CAATAAGAAGCACTGGGCAG+TGG - chr1_2:17419685-17419704 Msa0059900:CDS 50.0%
!! ATAAGAAGCACTGGGCAGTG+GGG - chr1_2:17419687-17419706 Msa0059900:CDS 50.0%
AAAGGGTAGGCACTCATGCA+TGG - chr1_2:17419751-17419770 Msa0059900:CDS 50.0%
GTAGGCACTCATGCATGGAA+TGG - chr1_2:17419756-17419775 Msa0059900:CDS 50.0%
!! TGGGCTTTGTTGTGAGGGAT+TGG - chr1_2:17419996-17420015 Msa0059900:CDS 50.0%
!! GGGCTTTGTTGTGAGGGATT+GGG - chr1_2:17419997-17420016 Msa0059900:CDS 50.0%
CTCATAAACCCTCCCGTTGA+AGG + chr1_2:17420049-17420068 None:intergenic 50.0%
TGCATAGGCCATGCTGCTAT+TGG + chr1_2:17420118-17420137 None:intergenic 50.0%
! CTTGGCTGGTCAGAATGCAT+AGG + chr1_2:17420133-17420152 None:intergenic 50.0%
GGTACGTCAATGGATGAAGG+TGG - chr1_2:17420325-17420344 Msa0059900:CDS 50.0%
!! CAATAAGAAGCACTGGGCAG+TGG - chr1_2:17419685-17419704 Msa0059900:CDS 50.0%
!! ATAAGAAGCACTGGGCAGTG+GGG - chr1_2:17419687-17419706 Msa0059900:CDS 50.0%
AAAGGGTAGGCACTCATGCA+TGG - chr1_2:17419751-17419770 Msa0059900:CDS 50.0%
GTAGGCACTCATGCATGGAA+TGG - chr1_2:17419756-17419775 Msa0059900:CDS 50.0%
!! TGGGCTTTGTTGTGAGGGAT+TGG - chr1_2:17419996-17420015 Msa0059900:CDS 50.0%
!! GGGCTTTGTTGTGAGGGATT+GGG - chr1_2:17419997-17420016 Msa0059900:CDS 50.0%
CTCATAAACCCTCCCGTTGA+AGG + chr1_2:17420049-17420068 None:intergenic 50.0%
TGCATAGGCCATGCTGCTAT+TGG + chr1_2:17420118-17420137 None:intergenic 50.0%
! CTTGGCTGGTCAGAATGCAT+AGG + chr1_2:17420133-17420152 None:intergenic 50.0%
GGTACGTCAATGGATGAAGG+TGG - chr1_2:17420325-17420344 Msa0059900:CDS 50.0%
TAAGCCACCCTTCAACGGGA+GGG - chr1_2:17420038-17420057 Msa0059900:CDS 55.0%
TAAACCCTCCCGTTGAAGGG+TGG + chr1_2:17420045-17420064 None:intergenic 55.0%
TAAGCCACCCTTCAACGGGA+GGG - chr1_2:17420038-17420057 Msa0059900:CDS 55.0%
TAAACCCTCCCGTTGAAGGG+TGG + chr1_2:17420045-17420064 None:intergenic 55.0%
CTAAGCCACCCTTCAACGGG+AGG - chr1_2:17420037-17420056 Msa0059900:CDS 60.0%
!! TGGGGGTGCCAATAGCAGCA+TGG - chr1_2:17420107-17420126 Msa0059900:CDS 60.0%
CTAAGCCACCCTTCAACGGG+AGG - chr1_2:17420037-17420056 Msa0059900:CDS 60.0%
!! TGGGGGTGCCAATAGCAGCA+TGG - chr1_2:17420107-17420126 Msa0059900:CDS 60.0%
GAGGGATTGGGCACCCCAGT+TGG - chr1_2:17420009-17420028 Msa0059900:CDS 65.0%
GAGGGATTGGGCACCCCAGT+TGG - chr1_2:17420009-17420028 Msa0059900:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 17419545 17420396 17419545 ID=Msa0059900;Name=Msa0059900
chr1_2 mRNA 17419545 17420396 17419545 ID=Msa0059900-mRNA-1;Parent=Msa0059900;Name=Msa0059900-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|-1|0|1|-1|1|1|0|283
chr1_2 exon 17419545 17420396 17419545 ID=Msa0059900-mRNA-1:exon:6763;Parent=Msa0059900-mRNA-1
chr1_2 CDS 17419545 17420396 17419545 ID=Msa0059900-mRNA-1:cds;Parent=Msa0059900-mRNA-1
Gene Sequence

>Msa0059900

ATGGAAGGATGCTTCACAAGCCAATTCGTTGATTTCATGATGGCTCAAAAGGAATTCTGTGAATTCAGTAATGGGAGCATATACAATACAAGCAGAGTAATCGAAGGTCCTTACTTGGAGTTGATAGAGAAAATCACTTGCAATAAGAAGCACTGGGCAGTGGGGCCCTTCAACCCTCTAAGCATTGAGGAGATTAAGAAAGATTCAAAGGGTAGGCACTCATGCATGGAATGGCTTGATAAACAAGAAACAAACTCAGTTATATATGTATCTTTTGGAACAACAACAACCTTGACAGAGGAACAAATTGAACAGATTGGAATTGGGTTGAAACAAAGCAAGATAAAGTTTATTTGGGTGTTGAGAGATGCTGATAAAGGAGACATCTTTGATAAAAATGAAGGGAAAAGAGGTGAACTTTCAAAAGGGTTTGAAGAGAGAGTTGAAGGAATGGGCTTTGTTGTGAGGGATTGGGCACCCCAGTTGGAAATTCTAAGCCACCCTTCAACGGGAGGGTTTATGAGTCATTGTGGATGGAACTCTACCTTAGAGAGCATTTCAATGGGGGTGCCAATAGCAGCATGGCCTATGCATTCTGACCAGCCAAGAAACTGTGTTTTGATAACACAAGTGTTAAAGATTGGTTTGGTTGTGAAGGATTGGGCTAAAAGACATGAATTGGTTACTGCTTCAGATATTGGGAATGTTGTTAAAAGGTTGATGGAGACAACAGAAGGTGATGAGATGCGAGAGAGAGCAATAAAACTTAAAAATGTTGTTGGTACGTCAATGGATGAAGGTGGAGTTTCTCGTATGGAAATGGATTCTTTCATCGCTCATATTACTAGATAG

Protein sequence

>Msa0059900

MEGCFTSQFVDFMMAQKEFCEFSNGSIYNTSRVIEGPYLELIEKITCNKKHWAVGPFNPLSIEEIKKDSKGRHSCMEWLDKQETNSVIYVSFGTTTTLTEEQIEQIGIGLKQSKIKFIWVLRDADKGDIFDKNEGKRGELSKGFEERVEGMGFVVRDWAPQLEILSHPSTGGFMSHCGWNSTLESISMGVPIAAWPMHSDQPRNCVLITQVLKIGLVVKDWAKRHELVTASDIGNVVKRLMETTEGDEMRERAIKLKNVVGTSMDEGGVSRMEMDSFIAHITR*