Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170300 | XP_003591799.1 | 92.473 | 372 | 26 | 1 | 1 | 372 | 1 | 370 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170300 | sp|Q84MB3|ACCH1_ARATH | 53.425 | 365 | 165 | 2 | 3 | 367 | 1 | 360 | 2.70e-141 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170300 | G7I469 | 92.473 | 372 | 26 | 1 | 1 | 372 | 1 | 370 | 0.0 | 709 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0070120 | Msa0170300 | 0.841991 | 3.396586e-58 | -8.615850e-47 |
| Msa0107830 | Msa0170300 | 0.821310 | 4.321442e-53 | -8.615850e-47 |
| Msa0117650 | Msa0170300 | 0.823372 | 1.435164e-53 | -8.615850e-47 |
| Msa0125690 | Msa0170300 | 0.836272 | 1.031448e-56 | -8.615850e-47 |
| Msa0139680 | Msa0170300 | 0.807673 | 4.507195e-50 | -8.615850e-47 |
| Msa0150620 | Msa0170300 | 0.802936 | 4.427031e-49 | -8.615850e-47 |
| Msa0161560 | Msa0170300 | 0.817640 | 2.969681e-52 | -8.615850e-47 |
| Msa0164250 | Msa0170300 | 0.800225 | 1.592343e-48 | -8.615850e-47 |
| Msa0170300 | Msa0185040 | 0.834077 | 3.691215e-56 | -8.615850e-47 |
| Msa0170300 | Msa0271700 | 0.826869 | 2.140348e-54 | -8.615850e-47 |
| Msa0170300 | Msa0271720 | 0.828071 | 1.102181e-54 | -8.615850e-47 |
| Msa0170300 | Msa0273070 | 0.801545 | 8.559756e-49 | -8.615850e-47 |
| Msa0170300 | Msa0275730 | 0.800273 | 1.557176e-48 | -8.615850e-47 |
| Msa0170300 | Msa0383900 | 0.801041 | 1.085858e-48 | -8.615850e-47 |
| Msa0170300 | Msa0387040 | 0.808386 | 3.177159e-50 | -8.615850e-47 |
| Msa0170300 | Msa0390200 | 0.829522 | 4.911386e-55 | -8.615850e-47 |
| Msa0170300 | Msa0415640 | 0.823648 | 1.237054e-53 | -8.615850e-47 |
| Msa0170300 | Msa0434300 | 0.800124 | 1.669793e-48 | -8.615850e-47 |
| Msa0170300 | Msa0434400 | 0.803485 | 3.408457e-49 | -8.615850e-47 |
| Msa0170300 | Msa0442860 | 0.810798 | 9.634052e-51 | -8.615850e-47 |
| Msa0170300 | Msa0460600 | 0.824679 | 7.083374e-54 | -8.615850e-47 |
| Msa0170300 | Msa0522140 | 0.800815 | 1.207382e-48 | -8.615850e-47 |
| Msa0170300 | Msa0556270 | 0.813488 | 2.496173e-51 | -8.615850e-47 |
| Msa0170300 | Msa0557240 | 0.827874 | 1.229287e-54 | -8.615850e-47 |
| Msa0170300 | Msa0561830 | 0.819516 | 1.114589e-52 | -8.615850e-47 |
| Msa0170300 | Msa0614960 | 0.816230 | 6.156857e-52 | -8.615850e-47 |
| Msa0170300 | Msa0619030 | -0.804375 | 2.225937e-49 | -8.615850e-47 |
| Msa0170300 | Msa0637590 | 0.812475 | 4.161396e-51 | -8.615850e-47 |
| Msa0170300 | Msa0652590 | 0.817311 | 3.522709e-52 | -8.615850e-47 |
| Msa0170300 | Msa0655370 | 0.812493 | 4.122836e-51 | -8.615850e-47 |
| Msa0170300 | Msa0694320 | 0.805210 | 1.489771e-49 | -8.615850e-47 |
| Msa0170300 | Msa0699170 | 0.829825 | 4.144767e-55 | -8.615850e-47 |
| Msa0170300 | Msa0709140 | 0.808143 | 3.579513e-50 | -8.615850e-47 |
| Msa0170300 | Msa0725580 | 0.807047 | 6.115636e-50 | -8.615850e-47 |
| Msa0170300 | Msa0925940 | 0.840939 | 6.427388e-58 | -8.615850e-47 |
| Msa0170300 | Msa0966590 | 0.809937 | 1.477809e-50 | -8.615850e-47 |
| Msa0170300 | Msa1007900 | 0.821079 | 4.885527e-53 | -8.615850e-47 |
| Msa0170300 | Msa1027910 | 0.816688 | 4.860334e-52 | -8.615850e-47 |
| Msa0170300 | Msa1030210 | 0.838046 | 3.629109e-57 | -8.615850e-47 |
| Msa0170300 | Msa1035050 | 0.809785 | 1.593565e-50 | -8.615850e-47 |
| Msa0170300 | Msa1069250 | 0.842204 | 2.982295e-58 | -8.615850e-47 |
| Msa0170300 | Msa1075090 | 0.808943 | 2.416081e-50 | -8.615850e-47 |
| Msa0170300 | Msa1084890 | 0.831352 | 1.752503e-55 | -8.615850e-47 |
| Msa0170300 | Msa1120580 | 0.839440 | 1.582858e-57 | -8.615850e-47 |
| Msa0170300 | Msa1136630 | 0.813654 | 2.294494e-51 | -8.615850e-47 |
| Msa0170300 | Msa1136690 | 0.823489 | 1.347679e-53 | -8.615850e-47 |
| Msa0170300 | Msa1136760 | 0.838899 | 2.186097e-57 | -8.615850e-47 |
| Msa0170300 | Msa1137750 | 0.801028 | 1.092533e-48 | -8.615850e-47 |
| Msa0170300 | Msa1157110 | 0.841077 | 5.912836e-58 | -8.615850e-47 |
| Msa0170300 | Msa1215540 | -0.813755 | 2.180025e-51 | -8.615850e-47 |
| Msa0170300 | Msa1223960 | 0.822569 | 2.208458e-53 | -8.615850e-47 |
| Msa0170300 | Msa1223990 | 0.853154 | 2.882856e-61 | -8.615850e-47 |
| Msa0170300 | Msa1239940 | 0.804673 | 1.929479e-49 | -8.615850e-47 |
| Msa0170300 | Msa1263110 | 0.819867 | 9.266865e-53 | -8.615850e-47 |
| Msa0170300 | Msa1263120 | 0.812915 | 3.334081e-51 | -8.615850e-47 |
| Msa0170300 | Msa1280960 | 0.803017 | 4.261104e-49 | -8.615850e-47 |
| Msa0170300 | Msa1307530 | 0.816089 | 6.616841e-52 | -8.615850e-47 |
| Msa0170300 | Msa1398140 | 0.829745 | 4.334285e-55 | -8.615850e-47 |
| Msa0170300 | Msa1404810 | -0.807183 | 5.723439e-50 | -8.615850e-47 |
| Msa0170300 | Msa1455200 | 0.826339 | 2.864325e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170300 | MtrunA17_Chr1g0187821 | 92.473 | 372 | 26 | 1 | 1 | 372 | 1 | 370 | 0.0 | 709 |
| Msa0170300 | MtrunA17_Chr1g0187811 | 83.905 | 379 | 53 | 4 | 1 | 372 | 116 | 493 | 0.0 | 657 |
| Msa0170300 | MtrunA17_Chr1g0187831 | 80.376 | 372 | 72 | 1 | 1 | 371 | 2 | 373 | 0.0 | 627 |
| Msa0170300 | MtrunA17_Chr7g0235951 | 61.290 | 372 | 135 | 3 | 4 | 372 | 8 | 373 | 4.49e-172 | 484 |
| Msa0170300 | MtrunA17_Chr4g0055591 | 62.881 | 361 | 121 | 5 | 15 | 372 | 11 | 361 | 2.20e-166 | 469 |
| Msa0170300 | MtrunA17_Chr8g0364471 | 59.631 | 379 | 140 | 4 | 1 | 372 | 1 | 373 | 3.22e-164 | 464 |
| Msa0170300 | MtrunA17_Chr8g0335411 | 61.580 | 367 | 132 | 3 | 9 | 372 | 13 | 373 | 4.14e-164 | 464 |
| Msa0170300 | MtrunA17_Chr2g0311701 | 59.350 | 369 | 141 | 4 | 8 | 372 | 12 | 375 | 3.48e-163 | 462 |
| Msa0170300 | MtrunA17_Chr7g0236011 | 62.032 | 374 | 131 | 4 | 2 | 372 | 8 | 373 | 3.50e-162 | 459 |
| Msa0170300 | MtrunA17_Chr7g0247991 | 60.422 | 379 | 137 | 4 | 1 | 372 | 1 | 373 | 7.81e-161 | 455 |
| Msa0170300 | MtrunA17_Chr2g0311711 | 60.656 | 366 | 138 | 4 | 8 | 372 | 10 | 370 | 3.01e-160 | 454 |
| Msa0170300 | MtrunA17_Chr4g0066991 | 61.957 | 368 | 111 | 5 | 8 | 372 | 12 | 353 | 3.88e-157 | 445 |
| Msa0170300 | MtrunA17_Chr2g0311681 | 56.868 | 364 | 148 | 4 | 13 | 372 | 11 | 369 | 5.24e-153 | 436 |
| Msa0170300 | MtrunA17_Chr2g0311691 | 55.769 | 364 | 152 | 4 | 13 | 372 | 11 | 369 | 7.20e-149 | 425 |
| Msa0170300 | MtrunA17_Chr8g0336851 | 51.676 | 358 | 162 | 4 | 17 | 372 | 16 | 364 | 2.71e-146 | 418 |
| Msa0170300 | MtrunA17_Chr8g0336751 | 54.472 | 369 | 163 | 2 | 4 | 372 | 34 | 397 | 2.93e-146 | 419 |
| Msa0170300 | MtrunA17_Chr8g0348081 | 54.190 | 358 | 151 | 5 | 18 | 372 | 17 | 364 | 6.14e-146 | 417 |
| Msa0170300 | MtrunA17_Chr8g0336761 | 53.911 | 358 | 152 | 5 | 18 | 372 | 17 | 364 | 5.16e-145 | 415 |
| Msa0170300 | MtrunA17_Chr8g0336631 | 52.368 | 359 | 157 | 5 | 18 | 372 | 17 | 365 | 2.34e-142 | 408 |
| Msa0170300 | MtrunA17_Chr8g0354241 | 52.198 | 364 | 166 | 4 | 12 | 372 | 16 | 374 | 3.79e-141 | 406 |
| Msa0170300 | MtrunA17_Chr2g0311741 | 58.912 | 331 | 131 | 3 | 42 | 372 | 2 | 327 | 1.54e-140 | 402 |
| Msa0170300 | MtrunA17_Chr8g0354261 | 52.342 | 363 | 165 | 4 | 13 | 372 | 17 | 374 | 3.92e-140 | 403 |
| Msa0170300 | MtrunA17_Chr8g0336781 | 50.689 | 363 | 159 | 5 | 17 | 372 | 51 | 400 | 6.85e-140 | 403 |
| Msa0170300 | MtrunA17_Chr8g0336861 | 52.089 | 359 | 159 | 6 | 18 | 372 | 17 | 366 | 1.85e-139 | 401 |
| Msa0170300 | MtrunA17_Chr6g0472861 | 50.933 | 375 | 172 | 5 | 5 | 372 | 4 | 373 | 2.59e-136 | 393 |
| Msa0170300 | MtrunA17_Chr2g0311761 | 51.381 | 362 | 166 | 4 | 14 | 372 | 18 | 372 | 2.94e-135 | 390 |
| Msa0170300 | MtrunA17_Chr2g0311921 | 50.556 | 360 | 172 | 3 | 14 | 372 | 4 | 358 | 3.78e-133 | 385 |
| Msa0170300 | MtrunA17_Chr2g0311831 | 51.247 | 361 | 167 | 3 | 14 | 372 | 18 | 371 | 2.11e-132 | 383 |
| Msa0170300 | MtrunA17_Chr4g0066121 | 53.687 | 339 | 143 | 6 | 17 | 351 | 16 | 344 | 2.17e-132 | 383 |
| Msa0170300 | MtrunA17_Chr7g0225881 | 48.387 | 372 | 183 | 5 | 5 | 372 | 4 | 370 | 4.95e-128 | 372 |
| Msa0170300 | MtrunA17_Chr1g0167951 | 49.304 | 359 | 174 | 3 | 14 | 372 | 5 | 355 | 6.89e-128 | 371 |
| Msa0170300 | MtrunA17_Chr2g0311861 | 48.128 | 374 | 165 | 4 | 1 | 372 | 1 | 347 | 1.01e-127 | 370 |
| Msa0170300 | MtrunA17_Chr1g0184241 | 50.411 | 365 | 171 | 4 | 8 | 372 | 13 | 367 | 1.83e-125 | 365 |
| Msa0170300 | MtrunA17_Chr4g0011311 | 60.884 | 294 | 105 | 3 | 1 | 290 | 1 | 288 | 2.14e-125 | 363 |
| Msa0170300 | MtrunA17_Chr1g0167911 | 49.575 | 353 | 169 | 4 | 14 | 365 | 5 | 349 | 2.27e-123 | 360 |
| Msa0170300 | MtrunA17_Chr7g0235981 | 48.077 | 364 | 148 | 5 | 12 | 372 | 2 | 327 | 4.31e-118 | 345 |
| Msa0170300 | MtrunA17_Chr1g0167961 | 48.066 | 362 | 176 | 6 | 14 | 372 | 20 | 372 | 2.60e-116 | 342 |
| Msa0170300 | MtrunA17_Chr8g0362741 | 57.823 | 294 | 99 | 5 | 1 | 290 | 1 | 273 | 2.77e-112 | 329 |
| Msa0170300 | MtrunA17_Chr1g0167931 | 45.028 | 362 | 148 | 5 | 14 | 372 | 5 | 318 | 2.83e-105 | 312 |
| Msa0170300 | MtrunA17_Chr7g0266651 | 41.737 | 357 | 201 | 4 | 10 | 365 | 5 | 355 | 3.83e-100 | 301 |
| Msa0170300 | MtrunA17_Chr1g0161081 | 44.321 | 361 | 189 | 7 | 13 | 371 | 21 | 371 | 7.11e-91 | 277 |
| Msa0170300 | MtrunA17_Chr1g0161041 | 43.681 | 364 | 195 | 6 | 9 | 371 | 40 | 394 | 2.54e-89 | 274 |
| Msa0170300 | MtrunA17_Chr1g0161111 | 42.432 | 370 | 203 | 6 | 3 | 371 | 70 | 430 | 2.19e-87 | 270 |
| Msa0170300 | MtrunA17_Chr8g0336831 | 49.356 | 233 | 106 | 5 | 18 | 247 | 17 | 240 | 9.04e-77 | 237 |
| Msa0170300 | MtrunA17_Chr8g0336871 | 56.069 | 173 | 70 | 1 | 195 | 367 | 3 | 169 | 2.95e-68 | 213 |
| Msa0170300 | MtrunA17_Chr8g0364161 | 57.065 | 184 | 69 | 3 | 1 | 180 | 1 | 178 | 3.55e-68 | 213 |
| Msa0170300 | MtrunA17_Chr8g0336801 | 60.265 | 151 | 60 | 0 | 222 | 372 | 6 | 156 | 5.21e-67 | 209 |
| Msa0170300 | MtrunA17_Chr7g0235991 | 55.422 | 166 | 70 | 1 | 45 | 210 | 1 | 162 | 1.79e-61 | 196 |
| Msa0170300 | MtrunA17_Chr3g0128001 | 34.571 | 350 | 201 | 8 | 32 | 371 | 5 | 336 | 2.35e-61 | 200 |
| Msa0170300 | MtrunA17_Chr8g0375571 | 32.857 | 350 | 199 | 11 | 40 | 372 | 20 | 350 | 4.79e-57 | 189 |
| Msa0170300 | MtrunA17_Chr7g0265221 | 32.692 | 364 | 221 | 7 | 14 | 359 | 10 | 367 | 5.18e-57 | 190 |
| Msa0170300 | MtrunA17_Chr8g0345831 | 32.110 | 327 | 206 | 4 | 49 | 372 | 30 | 343 | 2.81e-55 | 184 |
| Msa0170300 | MtrunA17_Chr5g0412651 | 34.304 | 309 | 191 | 4 | 59 | 359 | 28 | 332 | 3.54e-55 | 184 |
| Msa0170300 | MtrunA17_Chr7g0242551 | 32.320 | 362 | 225 | 9 | 19 | 368 | 5 | 358 | 1.80e-53 | 181 |
| Msa0170300 | MtrunA17_Chr8g0375701 | 30.328 | 366 | 233 | 8 | 16 | 372 | 3 | 355 | 6.88e-53 | 179 |
| Msa0170300 | MtrunA17_Chr3g0126741 | 31.232 | 349 | 220 | 10 | 8 | 346 | 2 | 340 | 9.72e-53 | 179 |
| Msa0170300 | MtrunA17_Chr6g0455481 | 34.304 | 309 | 181 | 9 | 61 | 360 | 35 | 330 | 1.49e-52 | 177 |
| Msa0170300 | MtrunA17_Chr5g0421011 | 33.138 | 341 | 206 | 9 | 40 | 372 | 22 | 348 | 1.89e-52 | 177 |
| Msa0170300 | MtrunA17_Chr5g0421041 | 32.277 | 347 | 201 | 10 | 39 | 372 | 21 | 346 | 2.76e-52 | 177 |
| Msa0170300 | MtrunA17_Chr1g0179801 | 32.022 | 356 | 223 | 9 | 28 | 372 | 26 | 373 | 3.70e-52 | 177 |
| Msa0170300 | MtrunA17_Chr8g0336791 | 44.865 | 185 | 92 | 4 | 18 | 200 | 17 | 193 | 2.05e-51 | 170 |
| Msa0170300 | MtrunA17_Chr7g0220011 | 33.333 | 303 | 182 | 7 | 68 | 362 | 38 | 328 | 3.42e-51 | 174 |
| Msa0170300 | MtrunA17_Chr5g0423191 | 31.594 | 345 | 204 | 10 | 41 | 372 | 23 | 348 | 4.80e-51 | 174 |
| Msa0170300 | MtrunA17_Chr5g0412681 | 32.903 | 310 | 188 | 5 | 59 | 360 | 23 | 320 | 6.84e-51 | 173 |
| Msa0170300 | MtrunA17_Chr7g0265351 | 31.077 | 325 | 212 | 5 | 47 | 367 | 16 | 332 | 1.01e-50 | 172 |
| Msa0170300 | MtrunA17_Chr5g0420951 | 31.487 | 343 | 211 | 10 | 40 | 372 | 27 | 355 | 1.99e-50 | 172 |
| Msa0170300 | MtrunA17_Chr7g0220001 | 34.000 | 300 | 178 | 7 | 69 | 360 | 41 | 328 | 3.66e-50 | 171 |
| Msa0170300 | MtrunA17_Chr4g0006371 | 30.790 | 367 | 229 | 9 | 20 | 367 | 5 | 365 | 5.41e-50 | 172 |
| Msa0170300 | MtrunA17_Chr5g0426891 | 30.519 | 308 | 206 | 6 | 69 | 372 | 39 | 342 | 9.87e-50 | 170 |
| Msa0170300 | MtrunA17_Chr5g0423251 | 32.081 | 346 | 203 | 10 | 40 | 372 | 22 | 348 | 1.23e-49 | 170 |
| Msa0170300 | MtrunA17_Chr5g0423201 | 32.558 | 344 | 205 | 11 | 40 | 372 | 22 | 349 | 1.36e-49 | 170 |
| Msa0170300 | MtrunA17_Chr5g0423221 | 31.268 | 339 | 206 | 12 | 40 | 367 | 46 | 368 | 1.47e-49 | 171 |
| Msa0170300 | MtrunA17_Chr3g0093761 | 31.519 | 349 | 215 | 10 | 27 | 367 | 16 | 348 | 7.39e-49 | 168 |
| Msa0170300 | MtrunA17_Chr5g0421091 | 31.161 | 353 | 218 | 12 | 29 | 372 | 11 | 347 | 8.66e-49 | 168 |
| Msa0170300 | MtrunA17_Chr1g0184161 | 31.922 | 307 | 199 | 5 | 69 | 371 | 38 | 338 | 8.90e-49 | 167 |
| Msa0170300 | MtrunA17_Chr1g0184111 | 30.556 | 360 | 221 | 7 | 19 | 371 | 1 | 338 | 1.03e-48 | 167 |
| Msa0170300 | MtrunA17_Chr5g0437181 | 31.534 | 352 | 222 | 9 | 29 | 371 | 14 | 355 | 1.21e-48 | 167 |
| Msa0170300 | MtrunA17_Chr3g0109041 | 29.775 | 356 | 225 | 8 | 29 | 372 | 10 | 352 | 1.28e-48 | 167 |
| Msa0170300 | MtrunA17_Chr5g0420941 | 30.114 | 352 | 222 | 10 | 29 | 372 | 11 | 346 | 2.64e-48 | 167 |
| Msa0170300 | MtrunA17_Chr1g0184121 | 32.581 | 310 | 194 | 5 | 69 | 371 | 37 | 338 | 3.85e-48 | 166 |
| Msa0170300 | MtrunA17_Chr5g0412671 | 32.797 | 311 | 183 | 7 | 68 | 361 | 37 | 338 | 5.01e-48 | 166 |
| Msa0170300 | MtrunA17_Chr5g0421101 | 30.029 | 343 | 214 | 9 | 40 | 372 | 22 | 348 | 5.17e-48 | 166 |
| Msa0170300 | MtrunA17_Chr8g0375601 | 29.118 | 340 | 227 | 6 | 40 | 372 | 20 | 352 | 8.84e-48 | 166 |
| Msa0170300 | MtrunA17_Chr2g0314391 | 29.091 | 330 | 214 | 8 | 55 | 372 | 52 | 373 | 1.26e-47 | 166 |
| Msa0170300 | MtrunA17_Chr3g0093741 | 30.460 | 348 | 221 | 8 | 27 | 367 | 16 | 349 | 1.60e-47 | 165 |
| Msa0170300 | MtrunA17_Chr3g0093751 | 29.885 | 348 | 223 | 8 | 27 | 367 | 16 | 349 | 2.12e-47 | 164 |
| Msa0170300 | MtrunA17_Chr8g0375671 | 28.319 | 339 | 229 | 6 | 40 | 372 | 27 | 357 | 3.97e-47 | 164 |
| Msa0170300 | MtrunA17_Chr5g0420901 | 29.261 | 352 | 225 | 10 | 29 | 372 | 12 | 347 | 5.46e-47 | 163 |
| Msa0170300 | MtrunA17_Chr1g0162351 | 32.036 | 334 | 192 | 8 | 68 | 372 | 68 | 395 | 7.62e-47 | 164 |
| Msa0170300 | MtrunA17_Chr2g0311631 | 28.075 | 374 | 241 | 9 | 4 | 368 | 3 | 357 | 8.01e-47 | 163 |
| Msa0170300 | MtrunA17_Chr3g0113641 | 30.000 | 360 | 235 | 8 | 20 | 371 | 6 | 356 | 8.35e-47 | 163 |
| Msa0170300 | MtrunA17_Chr2g0314381 | 27.273 | 352 | 235 | 8 | 29 | 372 | 42 | 380 | 8.91e-47 | 163 |
| Msa0170300 | MtrunA17_Chr4g0045441 | 33.887 | 301 | 168 | 7 | 69 | 345 | 26 | 319 | 1.52e-46 | 162 |
| Msa0170300 | MtrunA17_Chr4g0045431 | 33.775 | 302 | 158 | 9 | 76 | 345 | 28 | 319 | 1.73e-46 | 162 |
| Msa0170300 | MtrunA17_Chr1g0184151 | 31.833 | 311 | 194 | 6 | 68 | 370 | 37 | 337 | 1.89e-46 | 161 |
| Msa0170300 | MtrunA17_Chr1g0162321 | 32.036 | 334 | 192 | 8 | 68 | 372 | 68 | 395 | 2.31e-46 | 162 |
| Msa0170300 | MtrunA17_Chr1g0184101 | 32.484 | 314 | 192 | 8 | 68 | 372 | 37 | 339 | 3.34e-46 | 161 |
| Msa0170300 | MtrunA17_Chr8g0371931 | 32.941 | 255 | 164 | 3 | 69 | 317 | 39 | 292 | 9.18e-46 | 160 |
| Msa0170300 | MtrunA17_Chr8g0364171 | 65.455 | 110 | 38 | 0 | 181 | 290 | 17 | 126 | 9.20e-46 | 153 |
| Msa0170300 | MtrunA17_Chr2g0332191 | 34.375 | 320 | 175 | 11 | 69 | 370 | 52 | 354 | 1.32e-45 | 160 |
| Msa0170300 | MtrunA17_Chr4g0045411 | 31.879 | 298 | 171 | 8 | 69 | 344 | 30 | 317 | 1.96e-45 | 159 |
| Msa0170300 | MtrunA17_Chr1g0162361 | 31.498 | 327 | 190 | 7 | 69 | 372 | 27 | 342 | 2.35e-45 | 159 |
| Msa0170300 | MtrunA17_Chr8g0365241 | 29.841 | 315 | 200 | 8 | 68 | 372 | 56 | 359 | 5.05e-45 | 158 |
| Msa0170300 | MtrunA17_Chr4g0045451 | 31.230 | 317 | 189 | 8 | 69 | 364 | 26 | 334 | 1.23e-44 | 157 |
| Msa0170300 | MtrunA17_Chr5g0420981 | 29.326 | 341 | 221 | 9 | 40 | 372 | 27 | 355 | 1.30e-44 | 157 |
| Msa0170300 | MtrunA17_Chr8g0371921 | 32.941 | 255 | 164 | 3 | 69 | 317 | 39 | 292 | 2.11e-44 | 157 |
| Msa0170300 | MtrunA17_Chr2g0314401 | 28.612 | 353 | 230 | 9 | 28 | 372 | 16 | 354 | 2.53e-44 | 156 |
| Msa0170300 | MtrunA17_Chr7g0250511 | 32.765 | 293 | 180 | 6 | 69 | 353 | 49 | 332 | 3.51e-44 | 155 |
| Msa0170300 | MtrunA17_Chr4g0045471 | 32.372 | 312 | 179 | 9 | 69 | 355 | 26 | 330 | 5.64e-44 | 155 |
| Msa0170300 | MtrunA17_Chr1g0162191 | 29.712 | 313 | 210 | 5 | 61 | 368 | 39 | 346 | 5.95e-44 | 155 |
| Msa0170300 | MtrunA17_Chr1g0168001 | 43.860 | 171 | 91 | 4 | 14 | 182 | 5 | 172 | 9.98e-44 | 149 |
| Msa0170300 | MtrunA17_Chr2g0311751 | 53.906 | 128 | 59 | 0 | 55 | 182 | 13 | 140 | 2.30e-43 | 148 |
| Msa0170300 | MtrunA17_Chr4g0050031 | 30.605 | 281 | 186 | 7 | 69 | 344 | 62 | 338 | 1.46e-42 | 152 |
| Msa0170300 | MtrunA17_Chr3g0125201 | 31.270 | 307 | 173 | 10 | 69 | 358 | 3 | 288 | 1.62e-42 | 150 |
| Msa0170300 | MtrunA17_Chr5g0423211 | 27.762 | 353 | 231 | 9 | 29 | 372 | 13 | 350 | 1.10e-41 | 149 |
| Msa0170300 | MtrunA17_Chr7g0239111 | 28.904 | 301 | 198 | 6 | 69 | 362 | 55 | 346 | 2.23e-41 | 149 |
| Msa0170300 | MtrunA17_Chr3g0102041 | 31.373 | 255 | 168 | 3 | 69 | 317 | 39 | 292 | 2.44e-41 | 148 |
| Msa0170300 | MtrunA17_Chr5g0405411 | 30.502 | 259 | 165 | 4 | 69 | 317 | 39 | 292 | 4.86e-41 | 147 |
| Msa0170300 | MtrunA17_Chr5g0398291 | 28.319 | 339 | 225 | 8 | 29 | 355 | 8 | 340 | 6.43e-41 | 147 |
| Msa0170300 | MtrunA17_Chr8g0375681 | 30.909 | 275 | 181 | 4 | 103 | 372 | 15 | 285 | 8.08e-41 | 145 |
| Msa0170300 | MtrunA17_Chr2g0289341 | 31.475 | 305 | 179 | 12 | 68 | 357 | 3 | 292 | 1.42e-40 | 145 |
| Msa0170300 | MtrunA17_Chr5g0439011 | 33.663 | 303 | 173 | 12 | 67 | 356 | 3 | 290 | 2.54e-40 | 145 |
| Msa0170300 | MtrunA17_Chr3g0121141 | 32.886 | 298 | 176 | 12 | 68 | 356 | 3 | 285 | 4.05e-40 | 144 |
| Msa0170300 | MtrunA17_Chr2g0296371 | 29.808 | 312 | 198 | 7 | 68 | 367 | 49 | 351 | 5.44e-40 | 145 |
| Msa0170300 | MtrunA17_Chr2g0319491 | 30.034 | 293 | 180 | 7 | 66 | 351 | 30 | 304 | 1.69e-39 | 143 |
| Msa0170300 | MtrunA17_Chr7g0239821 | 28.990 | 307 | 200 | 6 | 68 | 366 | 63 | 359 | 3.07e-39 | 143 |
| Msa0170300 | MtrunA17_Chr1g0204181 | 31.250 | 304 | 185 | 5 | 66 | 353 | 56 | 351 | 3.39e-39 | 143 |
| Msa0170300 | MtrunA17_Chr7g0239121 | 28.065 | 310 | 196 | 10 | 69 | 365 | 51 | 346 | 1.52e-38 | 141 |
| Msa0170300 | MtrunA17_Chr7g0239101 | 28.197 | 305 | 201 | 7 | 69 | 365 | 55 | 349 | 3.87e-38 | 140 |
| Msa0170300 | MtrunA17_Chr8g0370721 | 31.153 | 321 | 198 | 10 | 63 | 372 | 46 | 354 | 2.14e-37 | 138 |
| Msa0170300 | MtrunA17_Chr6g0474391 | 30.508 | 295 | 189 | 5 | 66 | 348 | 61 | 351 | 2.42e-37 | 138 |
| Msa0170300 | MtrunA17_Chr7g0239091 | 27.097 | 310 | 204 | 6 | 68 | 372 | 159 | 451 | 2.62e-37 | 140 |
| Msa0170300 | MtrunA17_Chr5g0420721 | 34.518 | 197 | 125 | 2 | 177 | 372 | 57 | 250 | 2.63e-37 | 135 |
| Msa0170300 | MtrunA17_Chr1g0167921 | 55.140 | 107 | 48 | 0 | 183 | 289 | 50 | 156 | 3.15e-37 | 132 |
| Msa0170300 | MtrunA17_Chr8g0370711 | 30.421 | 309 | 195 | 8 | 63 | 360 | 46 | 345 | 4.64e-37 | 137 |
| Msa0170300 | MtrunA17_Chr4g0045461 | 31.000 | 300 | 177 | 6 | 69 | 345 | 26 | 318 | 2.50e-36 | 135 |
| Msa0170300 | MtrunA17_Chr3g0130391 | 28.650 | 363 | 221 | 10 | 7 | 348 | 8 | 353 | 3.18e-36 | 135 |
| Msa0170300 | MtrunA17_Chr3g0145171 | 28.525 | 305 | 197 | 8 | 63 | 357 | 46 | 339 | 4.40e-36 | 134 |
| Msa0170300 | MtrunA17_Chr3g0087031 | 29.260 | 311 | 196 | 10 | 63 | 362 | 54 | 351 | 8.54e-36 | 134 |
| Msa0170300 | MtrunA17_Chr1g0191201 | 26.593 | 361 | 209 | 10 | 33 | 353 | 1 | 345 | 1.76e-35 | 133 |
| Msa0170300 | MtrunA17_Chr5g0424201 | 28.869 | 336 | 203 | 9 | 34 | 353 | 12 | 327 | 5.12e-35 | 131 |
| Msa0170300 | MtrunA17_Chr4g0064781 | 29.900 | 301 | 182 | 9 | 60 | 347 | 41 | 325 | 4.91e-34 | 129 |
| Msa0170300 | MtrunA17_Chr5g0424211 | 29.503 | 322 | 187 | 10 | 40 | 342 | 16 | 316 | 6.25e-34 | 128 |
| Msa0170300 | MtrunA17_Chr7g0232161 | 31.707 | 246 | 149 | 7 | 67 | 302 | 58 | 294 | 1.67e-33 | 127 |
| Msa0170300 | MtrunA17_Chr1g0148771 | 27.964 | 329 | 200 | 9 | 52 | 367 | 46 | 350 | 2.29e-33 | 127 |
| Msa0170300 | MtrunA17_Chr8g0351101 | 28.754 | 313 | 180 | 6 | 66 | 353 | 51 | 345 | 1.32e-32 | 125 |
| Msa0170300 | MtrunA17_Chr3g0092531 | 31.967 | 244 | 143 | 7 | 87 | 320 | 26 | 256 | 9.30e-32 | 122 |
| Msa0170300 | MtrunA17_Chr3g0125421 | 27.500 | 320 | 184 | 10 | 62 | 353 | 29 | 328 | 2.14e-31 | 122 |
| Msa0170300 | MtrunA17_Chr6g0488511 | 28.269 | 283 | 178 | 11 | 69 | 340 | 3 | 271 | 8.71e-31 | 119 |
| Msa0170300 | MtrunA17_Chr3g0126761 | 35.976 | 164 | 100 | 2 | 180 | 341 | 42 | 202 | 8.60e-30 | 114 |
| Msa0170300 | MtrunA17_Chr3g0114861 | 31.104 | 299 | 188 | 7 | 69 | 359 | 40 | 328 | 3.65e-29 | 115 |
| Msa0170300 | MtrunA17_Chr2g0285931 | 27.245 | 323 | 193 | 10 | 69 | 372 | 28 | 327 | 1.00e-28 | 114 |
| Msa0170300 | MtrunA17_Chr5g0407731 | 29.393 | 313 | 184 | 11 | 69 | 368 | 33 | 321 | 1.11e-28 | 114 |
| Msa0170300 | MtrunA17_Chr8g0384461 | 26.299 | 308 | 199 | 7 | 63 | 353 | 41 | 337 | 1.50e-28 | 114 |
| Msa0170300 | MtrunA17_Chr3g0145181 | 26.936 | 297 | 203 | 7 | 63 | 351 | 43 | 333 | 1.53e-28 | 114 |
| Msa0170300 | MtrunA17_Chr2g0314371 | 26.623 | 308 | 184 | 9 | 28 | 305 | 16 | 311 | 8.05e-28 | 111 |
| Msa0170300 | MtrunA17_Chr8g0384481 | 27.419 | 310 | 190 | 7 | 63 | 352 | 53 | 347 | 1.78e-27 | 111 |
| Msa0170300 | MtrunA17_Chr3g0145201 | 26.129 | 310 | 214 | 8 | 51 | 351 | 665 | 968 | 2.73e-27 | 114 |
| Msa0170300 | MtrunA17_Chr3g0114871 | 28.745 | 247 | 156 | 6 | 64 | 299 | 37 | 274 | 5.66e-27 | 108 |
| Msa0170300 | MtrunA17_Chr3g0105281 | 27.413 | 259 | 166 | 8 | 74 | 317 | 28 | 279 | 3.88e-26 | 107 |
| Msa0170300 | MtrunA17_Chr7g0239071 | 24.731 | 279 | 198 | 6 | 95 | 367 | 24 | 296 | 1.16e-25 | 105 |
| Msa0170300 | MtrunA17_Chr5g0407781 | 26.480 | 321 | 191 | 11 | 69 | 372 | 5 | 297 | 1.39e-25 | 104 |
| Msa0170300 | MtrunA17_Chr8g0336841 | 54.217 | 83 | 38 | 0 | 290 | 372 | 9 | 91 | 2.18e-25 | 98.6 |
| Msa0170300 | MtrunA17_Chr2g0313111 | 26.280 | 293 | 184 | 11 | 69 | 348 | 28 | 301 | 7.48e-25 | 103 |
| Msa0170300 | MtrunA17_Chr7g0247741 | 30.795 | 302 | 173 | 12 | 61 | 345 | 3 | 285 | 7.67e-25 | 103 |
| Msa0170300 | MtrunA17_Chr1g0161101 | 40.120 | 167 | 88 | 3 | 167 | 332 | 346 | 501 | 1.46e-24 | 104 |
| Msa0170300 | MtrunA17_Chr4g0068891 | 27.586 | 319 | 196 | 12 | 69 | 371 | 20 | 319 | 1.71e-24 | 102 |
| Msa0170300 | MtrunA17_Chr1g0170631 | 28.947 | 190 | 129 | 3 | 180 | 367 | 1 | 186 | 2.07e-24 | 99.0 |
| Msa0170300 | MtrunA17_Chr5g0394071 | 35.119 | 168 | 100 | 2 | 184 | 351 | 4 | 162 | 2.14e-24 | 98.6 |
| Msa0170300 | MtrunA17_Chr4g0075471 | 41.818 | 110 | 60 | 2 | 230 | 338 | 32 | 138 | 3.16e-24 | 97.4 |
| Msa0170300 | MtrunA17_Chr1g0194321 | 27.083 | 336 | 190 | 13 | 69 | 372 | 20 | 332 | 7.69e-24 | 100 |
| Msa0170300 | MtrunA17_Chr8g0348951 | 30.743 | 296 | 167 | 11 | 70 | 344 | 6 | 284 | 9.07e-24 | 100 |
| Msa0170300 | MtrunA17_Chr5g0420881 | 30.137 | 146 | 98 | 2 | 228 | 372 | 2 | 144 | 1.66e-23 | 95.1 |
| Msa0170300 | MtrunA17_Chr4g0037611 | 42.149 | 121 | 69 | 1 | 202 | 321 | 11 | 131 | 1.06e-22 | 94.0 |
| Msa0170300 | MtrunA17_Chr6g0486831 | 25.680 | 331 | 189 | 11 | 65 | 358 | 16 | 326 | 1.83e-22 | 97.1 |
| Msa0170300 | MtrunA17_Chr8g0358941 | 25.581 | 301 | 197 | 7 | 91 | 372 | 41 | 333 | 3.59e-22 | 95.9 |
| Msa0170300 | MtrunA17_Chr7g0233661 | 33.793 | 145 | 87 | 1 | 207 | 351 | 1 | 136 | 1.76e-21 | 90.1 |
| Msa0170300 | MtrunA17_Chr8g0389941 | 26.087 | 345 | 185 | 14 | 52 | 346 | 6 | 330 | 8.21e-21 | 92.4 |
| Msa0170300 | MtrunA17_Chr3g0092581 | 33.750 | 160 | 98 | 5 | 195 | 351 | 4 | 158 | 5.31e-20 | 86.7 |
| Msa0170300 | MtrunA17_Chr4g0053251 | 25.316 | 316 | 207 | 8 | 68 | 356 | 7 | 320 | 5.32e-20 | 89.7 |
| Msa0170300 | MtrunA17_Chr4g0052251 | 25.413 | 303 | 187 | 10 | 69 | 351 | 29 | 312 | 1.28e-18 | 85.9 |
| Msa0170300 | MtrunA17_Chr4g0055911 | 27.134 | 328 | 198 | 14 | 64 | 367 | 4 | 314 | 2.31e-18 | 85.1 |
| Msa0170300 | MtrunA17_Chr7g0219991 | 39.252 | 107 | 63 | 2 | 183 | 288 | 249 | 354 | 2.90e-18 | 85.1 |
| Msa0170300 | MtrunA17_Chr2g0311611 | 45.714 | 70 | 31 | 1 | 228 | 290 | 2 | 71 | 3.51e-18 | 78.2 |
| Msa0170300 | MtrunA17_Chr1g0158021 | 25.108 | 231 | 160 | 9 | 59 | 282 | 37 | 261 | 7.21e-18 | 82.4 |
| Msa0170300 | MtrunA17_Chr1g0158011 | 24.723 | 271 | 188 | 9 | 108 | 372 | 1 | 261 | 8.89e-18 | 82.4 |
| Msa0170300 | MtrunA17_Chr2g0311821 | 49.474 | 95 | 42 | 2 | 73 | 165 | 11 | 101 | 9.96e-18 | 79.0 |
| Msa0170300 | MtrunA17_Chr2g0319521 | 33.945 | 109 | 72 | 0 | 182 | 290 | 16 | 124 | 3.40e-17 | 77.8 |
| Msa0170300 | MtrunA17_Chr4g0064771 | 30.723 | 166 | 104 | 5 | 187 | 347 | 31 | 190 | 7.47e-17 | 78.6 |
| Msa0170300 | MtrunA17_Chr7g0252371 | 55.952 | 84 | 36 | 1 | 185 | 267 | 1 | 84 | 1.07e-16 | 75.5 |
| Msa0170300 | MtrunA17_Chr8g0375581 | 39.535 | 86 | 49 | 3 | 204 | 287 | 2 | 86 | 9.28e-16 | 72.0 |
| Msa0170300 | MtrunA17_Chr2g0293931 | 31.724 | 145 | 89 | 4 | 185 | 319 | 10 | 154 | 5.02e-15 | 73.2 |
| Msa0170300 | MtrunA17_Chr4g0004071 | 23.355 | 304 | 207 | 9 | 69 | 359 | 9 | 299 | 2.35e-13 | 70.1 |
| Msa0170300 | MtrunA17_Chr8g0375591 | 40.244 | 82 | 40 | 2 | 63 | 139 | 40 | 117 | 3.17e-13 | 66.2 |
| Msa0170300 | MtrunA17_Chr1g0170641 | 26.718 | 131 | 88 | 2 | 40 | 169 | 22 | 145 | 3.67e-12 | 64.3 |
| Msa0170300 | MtrunA17_Chr8g0375661 | 30.476 | 105 | 60 | 3 | 40 | 139 | 27 | 123 | 2.39e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170300 | AT1G06620.1 | 53.425 | 365 | 165 | 2 | 3 | 367 | 1 | 360 | 2.74e-142 | 408 |
| Msa0170300 | AT5G59540.1 | 51.381 | 362 | 170 | 4 | 13 | 372 | 9 | 366 | 5.52e-135 | 390 |
| Msa0170300 | AT2G30840.1 | 53.973 | 365 | 160 | 5 | 11 | 372 | 3 | 362 | 9.17e-135 | 389 |
| Msa0170300 | AT5G59530.1 | 51.791 | 363 | 166 | 5 | 13 | 372 | 8 | 364 | 1.97e-134 | 389 |
| Msa0170300 | AT1G06650.2 | 48.895 | 362 | 181 | 3 | 13 | 372 | 10 | 369 | 2.62e-129 | 375 |
| Msa0170300 | AT2G30840.3 | 52.877 | 365 | 158 | 6 | 11 | 372 | 3 | 356 | 5.13e-129 | 374 |
| Msa0170300 | AT2G30830.1 | 50.829 | 362 | 168 | 5 | 13 | 372 | 5 | 358 | 1.55e-128 | 373 |
| Msa0170300 | AT1G06640.1 | 49.036 | 363 | 181 | 3 | 12 | 372 | 9 | 369 | 1.32e-126 | 369 |
| Msa0170300 | AT1G04350.1 | 49.589 | 365 | 175 | 5 | 10 | 372 | 3 | 360 | 3.42e-126 | 367 |
| Msa0170300 | AT5G43440.1 | 50.139 | 359 | 175 | 3 | 15 | 372 | 10 | 365 | 1.03e-123 | 361 |
| Msa0170300 | AT2G25450.1 | 47.123 | 365 | 184 | 5 | 10 | 372 | 2 | 359 | 3.57e-123 | 360 |
| Msa0170300 | AT1G04380.1 | 51.351 | 333 | 154 | 2 | 40 | 372 | 21 | 345 | 4.62e-122 | 356 |
| Msa0170300 | AT1G03410.2 | 47.922 | 361 | 182 | 5 | 14 | 372 | 5 | 361 | 1.75e-121 | 355 |
| Msa0170300 | AT1G03410.1 | 47.922 | 361 | 182 | 5 | 14 | 372 | 42 | 398 | 4.68e-121 | 355 |
| Msa0170300 | AT5G43450.1 | 50.282 | 354 | 171 | 3 | 14 | 367 | 9 | 357 | 4.82e-121 | 354 |
| Msa0170300 | AT1G06645.1 | 47.658 | 363 | 183 | 4 | 12 | 372 | 22 | 379 | 3.87e-119 | 350 |
| Msa0170300 | AT1G03400.1 | 47.222 | 360 | 176 | 5 | 14 | 372 | 5 | 351 | 1.87e-118 | 347 |
| Msa0170300 | AT3G61400.1 | 46.467 | 368 | 184 | 6 | 9 | 368 | 5 | 367 | 5.77e-117 | 344 |
| Msa0170300 | AT1G03400.2 | 43.814 | 388 | 176 | 6 | 14 | 372 | 5 | 379 | 8.79e-112 | 331 |
| Msa0170300 | AT1G06620.2 | 52.613 | 287 | 131 | 2 | 3 | 289 | 1 | 282 | 2.14e-108 | 319 |
| Msa0170300 | AT2G30840.2 | 53.025 | 281 | 126 | 3 | 11 | 289 | 3 | 279 | 5.53e-103 | 306 |
| Msa0170300 | AT1G06650.1 | 48.746 | 279 | 140 | 2 | 13 | 290 | 10 | 286 | 1.41e-98 | 295 |
| Msa0170300 | AT5G59540.2 | 49.286 | 280 | 136 | 4 | 13 | 290 | 9 | 284 | 3.88e-98 | 293 |
| Msa0170300 | AT1G06640.2 | 48.621 | 290 | 144 | 3 | 12 | 298 | 9 | 296 | 2.74e-97 | 292 |
| Msa0170300 | AT1G06640.3 | 48.929 | 280 | 140 | 2 | 12 | 290 | 9 | 286 | 1.50e-96 | 289 |
| Msa0170300 | AT5G43450.2 | 50.883 | 283 | 134 | 3 | 14 | 296 | 9 | 286 | 3.99e-96 | 288 |
| Msa0170300 | AT5G43440.2 | 49.822 | 281 | 137 | 3 | 15 | 294 | 10 | 287 | 6.25e-95 | 285 |
| Msa0170300 | AT3G61400.2 | 46.713 | 289 | 142 | 5 | 9 | 290 | 5 | 288 | 7.60e-91 | 275 |
| Msa0170300 | AT1G04380.2 | 48.606 | 251 | 121 | 2 | 40 | 290 | 21 | 263 | 4.20e-86 | 262 |
| Msa0170300 | AT4G10500.1 | 36.538 | 312 | 189 | 6 | 64 | 371 | 39 | 345 | 1.31e-63 | 207 |
| Msa0170300 | AT4G10490.1 | 34.304 | 309 | 193 | 6 | 68 | 371 | 41 | 344 | 1.44e-63 | 207 |
| Msa0170300 | AT5G24530.1 | 34.906 | 318 | 190 | 4 | 61 | 370 | 30 | 338 | 2.91e-63 | 206 |
| Msa0170300 | AT3G13610.1 | 33.516 | 364 | 222 | 10 | 10 | 367 | 7 | 356 | 2.11e-62 | 204 |
| Msa0170300 | AT1G55290.1 | 32.764 | 351 | 206 | 9 | 28 | 367 | 25 | 356 | 2.56e-58 | 193 |
| Msa0170300 | AT2G36690.2 | 33.129 | 326 | 209 | 4 | 26 | 347 | 18 | 338 | 4.98e-55 | 185 |
| Msa0170300 | AT2G36690.1 | 33.129 | 326 | 209 | 4 | 26 | 347 | 18 | 338 | 4.98e-55 | 185 |
| Msa0170300 | AT3G12900.1 | 31.487 | 343 | 220 | 9 | 28 | 367 | 21 | 351 | 5.18e-54 | 182 |
| Msa0170300 | AT2G38240.1 | 31.092 | 357 | 222 | 10 | 21 | 367 | 4 | 346 | 5.40e-51 | 174 |
| Msa0170300 | AT5G05600.1 | 30.919 | 359 | 231 | 8 | 15 | 365 | 13 | 362 | 1.75e-49 | 171 |
| Msa0170300 | AT1G17020.1 | 30.028 | 353 | 229 | 8 | 28 | 372 | 16 | 358 | 3.10e-48 | 167 |
| Msa0170300 | AT1G78550.1 | 28.438 | 320 | 213 | 7 | 61 | 372 | 45 | 356 | 2.17e-47 | 165 |
| Msa0170300 | AT4G25300.1 | 29.296 | 355 | 226 | 10 | 29 | 372 | 16 | 356 | 3.56e-47 | 164 |
| Msa0170300 | AT3G11180.1 | 31.014 | 345 | 221 | 8 | 29 | 365 | 56 | 391 | 1.09e-44 | 159 |
| Msa0170300 | AT3G11180.2 | 30.571 | 350 | 226 | 8 | 29 | 370 | 56 | 396 | 1.59e-44 | 158 |
| Msa0170300 | AT3G19000.1 | 33.127 | 323 | 177 | 7 | 47 | 345 | 14 | 321 | 5.07e-44 | 155 |
| Msa0170300 | AT3G51240.1 | 31.765 | 255 | 167 | 3 | 69 | 317 | 38 | 291 | 5.51e-44 | 156 |
| Msa0170300 | AT1G17010.1 | 29.375 | 320 | 209 | 7 | 62 | 372 | 47 | 358 | 6.69e-44 | 155 |
| Msa0170300 | AT2G44800.1 | 32.000 | 300 | 187 | 6 | 64 | 355 | 47 | 337 | 6.79e-44 | 155 |
| Msa0170300 | AT4G25310.1 | 28.205 | 351 | 232 | 9 | 29 | 372 | 16 | 353 | 8.31e-44 | 155 |
| Msa0170300 | AT4G16330.2 | 28.895 | 353 | 223 | 9 | 26 | 367 | 24 | 359 | 1.74e-43 | 155 |
| Msa0170300 | AT3G60290.1 | 32.343 | 303 | 188 | 6 | 61 | 355 | 44 | 337 | 4.79e-42 | 150 |
| Msa0170300 | AT3G55970.1 | 30.904 | 343 | 219 | 10 | 29 | 360 | 14 | 349 | 4.35e-41 | 148 |
| Msa0170300 | AT3G19010.1 | 31.290 | 310 | 183 | 9 | 59 | 345 | 14 | 316 | 9.89e-40 | 144 |
| Msa0170300 | AT3G19010.4 | 31.290 | 310 | 183 | 9 | 59 | 345 | 14 | 316 | 9.89e-40 | 144 |
| Msa0170300 | AT1G77330.1 | 30.796 | 289 | 176 | 8 | 69 | 344 | 3 | 280 | 2.17e-39 | 142 |
| Msa0170300 | AT4G22880.1 | 27.941 | 340 | 226 | 9 | 29 | 355 | 7 | 340 | 5.69e-39 | 142 |
| Msa0170300 | AT4G22880.2 | 27.941 | 340 | 226 | 9 | 29 | 355 | 7 | 340 | 5.69e-39 | 142 |
| Msa0170300 | AT4G22880.3 | 27.941 | 340 | 226 | 9 | 29 | 355 | 7 | 340 | 5.69e-39 | 142 |
| Msa0170300 | AT4G21200.1 | 32.990 | 291 | 167 | 8 | 69 | 351 | 42 | 312 | 1.28e-38 | 141 |
| Msa0170300 | AT3G21420.1 | 31.935 | 310 | 195 | 10 | 68 | 367 | 54 | 357 | 1.57e-38 | 141 |
| Msa0170300 | AT5G08640.2 | 27.353 | 340 | 209 | 10 | 29 | 351 | 6 | 324 | 5.20e-38 | 139 |
| Msa0170300 | AT5G08640.1 | 27.353 | 340 | 209 | 10 | 29 | 351 | 6 | 324 | 5.20e-38 | 139 |
| Msa0170300 | AT4G25420.1 | 28.829 | 333 | 213 | 4 | 36 | 348 | 19 | 347 | 1.14e-37 | 139 |
| Msa0170300 | AT1G78550.2 | 27.046 | 281 | 190 | 6 | 100 | 372 | 5 | 278 | 5.18e-37 | 135 |
| Msa0170300 | AT1G05010.1 | 32.975 | 279 | 161 | 11 | 70 | 337 | 5 | 268 | 1.43e-36 | 135 |
| Msa0170300 | AT5G05600.2 | 30.634 | 284 | 183 | 7 | 15 | 290 | 13 | 290 | 1.84e-36 | 134 |
| Msa0170300 | AT5G07480.1 | 29.260 | 311 | 197 | 8 | 57 | 353 | 33 | 334 | 3.04e-36 | 135 |
| Msa0170300 | AT1G15550.1 | 29.607 | 331 | 185 | 12 | 55 | 361 | 43 | 349 | 5.81e-36 | 134 |
| Msa0170300 | AT5G12270.1 | 28.726 | 369 | 231 | 11 | 18 | 372 | 9 | 359 | 1.93e-35 | 133 |
| Msa0170300 | AT3G19010.3 | 31.399 | 293 | 175 | 9 | 59 | 345 | 14 | 286 | 2.33e-35 | 132 |
| Msa0170300 | AT1G62380.1 | 31.274 | 259 | 156 | 10 | 70 | 318 | 8 | 254 | 1.77e-34 | 129 |
| Msa0170300 | AT3G19000.2 | 30.970 | 268 | 149 | 6 | 47 | 290 | 14 | 269 | 5.49e-34 | 127 |
| Msa0170300 | AT1G12010.1 | 30.888 | 259 | 157 | 9 | 70 | 318 | 8 | 254 | 9.13e-34 | 127 |
| Msa0170300 | AT5G63590.1 | 29.431 | 299 | 187 | 9 | 65 | 351 | 10 | 296 | 9.53e-33 | 124 |
| Msa0170300 | AT5G20400.1 | 26.316 | 323 | 218 | 8 | 44 | 357 | 22 | 333 | 1.44e-32 | 125 |
| Msa0170300 | AT5G63600.1 | 28.261 | 322 | 195 | 11 | 49 | 354 | 15 | 316 | 1.99e-32 | 124 |
| Msa0170300 | AT1G60980.1 | 29.412 | 306 | 196 | 5 | 67 | 356 | 55 | 356 | 2.62e-32 | 125 |
| Msa0170300 | AT1G50960.1 | 30.035 | 283 | 188 | 5 | 56 | 330 | 21 | 301 | 2.74e-32 | 124 |
| Msa0170300 | AT3G51240.2 | 33.514 | 185 | 117 | 2 | 139 | 317 | 23 | 207 | 3.06e-32 | 122 |
| Msa0170300 | AT5G63600.2 | 28.793 | 323 | 193 | 12 | 49 | 354 | 15 | 317 | 4.76e-32 | 123 |
| Msa0170300 | AT4G25420.2 | 29.151 | 271 | 171 | 3 | 36 | 286 | 19 | 288 | 3.20e-31 | 120 |
| Msa0170300 | AT4G16330.1 | 30.734 | 218 | 140 | 4 | 154 | 367 | 43 | 253 | 2.31e-30 | 117 |
| Msa0170300 | AT5G51810.1 | 29.293 | 297 | 185 | 5 | 66 | 348 | 60 | 345 | 2.76e-30 | 119 |
| Msa0170300 | AT5G63595.1 | 29.861 | 288 | 147 | 10 | 41 | 313 | 2 | 249 | 3.03e-30 | 117 |
| Msa0170300 | AT3G55970.2 | 30.909 | 275 | 175 | 9 | 29 | 292 | 14 | 284 | 8.40e-30 | 116 |
| Msa0170300 | AT4G25300.2 | 32.124 | 193 | 126 | 3 | 182 | 372 | 73 | 262 | 1.16e-29 | 115 |
| Msa0170300 | AT4G25310.2 | 25.429 | 350 | 215 | 10 | 29 | 372 | 16 | 325 | 1.23e-29 | 117 |
| Msa0170300 | AT5G07200.1 | 28.889 | 315 | 189 | 8 | 42 | 337 | 37 | 335 | 1.56e-29 | 117 |
| Msa0170300 | AT1G80330.1 | 29.851 | 335 | 173 | 14 | 68 | 369 | 48 | 353 | 2.21e-29 | 116 |
| Msa0170300 | AT5G20550.1 | 26.220 | 328 | 227 | 9 | 42 | 360 | 19 | 340 | 4.14e-29 | 115 |
| Msa0170300 | AT2G19590.1 | 29.167 | 264 | 162 | 11 | 66 | 318 | 8 | 257 | 9.34e-29 | 114 |
| Msa0170300 | AT4G21690.1 | 30.124 | 322 | 186 | 14 | 69 | 371 | 47 | 348 | 6.05e-28 | 112 |
| Msa0170300 | AT3G19010.2 | 28.682 | 258 | 157 | 8 | 59 | 293 | 14 | 267 | 8.87e-28 | 111 |
| Msa0170300 | AT1G78440.1 | 27.586 | 319 | 186 | 12 | 69 | 364 | 18 | 314 | 5.27e-27 | 109 |
| Msa0170300 | AT1G30040.1 | 27.063 | 303 | 175 | 10 | 68 | 348 | 30 | 308 | 8.58e-27 | 109 |
| Msa0170300 | AT5G54000.2 | 27.564 | 312 | 186 | 10 | 66 | 357 | 43 | 334 | 2.46e-26 | 108 |
| Msa0170300 | AT1G44090.1 | 26.562 | 320 | 219 | 6 | 63 | 370 | 57 | 372 | 6.75e-26 | 107 |
| Msa0170300 | AT1G49390.1 | 25.000 | 300 | 208 | 7 | 66 | 356 | 42 | 333 | 8.61e-26 | 106 |
| Msa0170300 | AT5G51810.2 | 29.752 | 242 | 148 | 4 | 66 | 293 | 60 | 293 | 2.49e-25 | 104 |
| Msa0170300 | AT1G80340.1 | 38.889 | 144 | 81 | 3 | 229 | 371 | 209 | 346 | 4.58e-24 | 102 |
| Msa0170300 | AT1G14130.1 | 26.115 | 314 | 193 | 11 | 69 | 367 | 9 | 298 | 7.95e-24 | 100 |
| Msa0170300 | AT1G14120.2 | 28.767 | 292 | 169 | 13 | 69 | 345 | 8 | 275 | 1.26e-23 | 100 |
| Msa0170300 | AT1G14120.1 | 28.767 | 292 | 169 | 13 | 69 | 345 | 8 | 275 | 1.26e-23 | 100 |
| Msa0170300 | AT1G14120.3 | 28.767 | 292 | 169 | 13 | 69 | 345 | 8 | 275 | 1.26e-23 | 100 |
| Msa0170300 | AT4G23340.1 | 29.221 | 308 | 186 | 11 | 61 | 353 | 2 | 292 | 2.73e-23 | 99.4 |
| Msa0170300 | AT2G19590.2 | 30.556 | 252 | 150 | 11 | 80 | 318 | 3 | 242 | 4.84e-23 | 98.2 |
| Msa0170300 | AT3G47190.1 | 25.632 | 277 | 169 | 8 | 62 | 317 | 25 | 285 | 5.25e-23 | 98.6 |
| Msa0170300 | AT5G58660.1 | 27.407 | 270 | 157 | 9 | 67 | 307 | 32 | 291 | 9.27e-23 | 98.2 |
| Msa0170300 | AT5G63580.2 | 30.043 | 233 | 141 | 7 | 69 | 290 | 19 | 240 | 1.85e-22 | 95.5 |
| Msa0170300 | AT5G63580.1 | 30.568 | 229 | 137 | 7 | 69 | 286 | 19 | 236 | 2.21e-22 | 95.5 |
| Msa0170300 | AT1G47990.1 | 27.864 | 323 | 195 | 12 | 68 | 371 | 14 | 317 | 3.37e-22 | 96.3 |
| Msa0170300 | AT5G43935.1 | 25.246 | 305 | 184 | 9 | 69 | 361 | 19 | 291 | 1.18e-21 | 94.4 |
| Msa0170300 | AT2G34555.1 | 27.273 | 308 | 188 | 9 | 69 | 359 | 27 | 315 | 1.63e-21 | 94.7 |
| Msa0170300 | AT5G07480.2 | 28.017 | 232 | 145 | 7 | 136 | 353 | 2 | 225 | 7.60e-21 | 90.9 |
| Msa0170300 | AT5G54000.1 | 26.642 | 274 | 161 | 10 | 104 | 357 | 1 | 254 | 1.53e-19 | 87.8 |
| Msa0170300 | AT1G49390.2 | 24.046 | 262 | 182 | 7 | 104 | 356 | 1 | 254 | 1.02e-18 | 85.5 |
| Msa0170300 | AT5G58660.2 | 26.877 | 253 | 146 | 9 | 67 | 290 | 32 | 274 | 1.80e-18 | 85.1 |
| Msa0170300 | AT1G30040.2 | 26.122 | 245 | 138 | 9 | 68 | 290 | 30 | 253 | 1.86e-18 | 84.7 |
| Msa0170300 | AT5G51310.1 | 28.571 | 280 | 152 | 11 | 69 | 319 | 5 | 265 | 5.39e-18 | 84.3 |
| Msa0170300 | AT1G02400.1 | 27.660 | 329 | 182 | 15 | 63 | 362 | 18 | 319 | 1.49e-17 | 83.2 |
| Msa0170300 | AT4G23340.2 | 35.211 | 142 | 85 | 4 | 216 | 353 | 36 | 174 | 3.50e-17 | 79.7 |
| Msa0170300 | AT3G50210.4 | 25.547 | 274 | 176 | 8 | 85 | 334 | 32 | 301 | 4.56e-17 | 81.6 |
| Msa0170300 | AT3G50210.1 | 25.547 | 274 | 176 | 8 | 85 | 334 | 32 | 301 | 4.56e-17 | 81.6 |
| Msa0170300 | AT3G50210.3 | 25.547 | 274 | 176 | 8 | 85 | 334 | 32 | 301 | 4.56e-17 | 81.6 |
| Msa0170300 | AT2G06960.1 | 36.496 | 137 | 70 | 4 | 223 | 359 | 26 | 145 | 7.89e-17 | 77.4 |
| Msa0170300 | AT3G46500.5 | 27.010 | 311 | 192 | 10 | 56 | 344 | 3 | 300 | 1.43e-16 | 80.1 |
| Msa0170300 | AT3G49620.1 | 25.185 | 270 | 177 | 7 | 85 | 334 | 58 | 322 | 1.06e-15 | 78.2 |
| Msa0170300 | AT3G49630.1 | 25.185 | 270 | 177 | 6 | 85 | 334 | 33 | 297 | 2.05e-15 | 77.0 |
| Msa0170300 | AT3G49630.3 | 25.185 | 270 | 177 | 6 | 85 | 334 | 29 | 293 | 2.13e-15 | 76.6 |
| Msa0170300 | AT1G52820.1 | 23.913 | 322 | 210 | 11 | 67 | 370 | 10 | 314 | 2.42e-15 | 76.6 |
| Msa0170300 | AT3G46500.7 | 26.103 | 272 | 170 | 8 | 56 | 305 | 3 | 265 | 4.66e-14 | 72.4 |
| Msa0170300 | AT3G46490.1 | 25.237 | 317 | 197 | 12 | 56 | 344 | 3 | 307 | 3.29e-13 | 70.5 |
| Msa0170300 | AT4G16765.3 | 32.222 | 180 | 107 | 7 | 175 | 344 | 53 | 227 | 4.17e-13 | 68.9 |
| Msa0170300 | AT3G46490.2 | 24.910 | 277 | 172 | 10 | 56 | 304 | 3 | 271 | 4.64e-13 | 69.7 |
| Msa0170300 | AT4G16765.6 | 31.383 | 188 | 116 | 7 | 175 | 351 | 53 | 238 | 9.94e-13 | 67.8 |
| Msa0170300 | AT4G16765.1 | 31.383 | 188 | 116 | 7 | 175 | 351 | 53 | 238 | 9.94e-13 | 67.8 |
| Msa0170300 | AT4G16765.2 | 31.383 | 188 | 116 | 7 | 175 | 351 | 53 | 238 | 9.94e-13 | 67.8 |
| Msa0170300 | AT4G03070.1 | 25.610 | 328 | 206 | 14 | 64 | 370 | 9 | 319 | 4.78e-12 | 66.6 |
| Msa0170300 | AT3G50210.2 | 28.070 | 171 | 112 | 5 | 171 | 334 | 53 | 219 | 6.96e-12 | 65.5 |
| Msa0170300 | AT4G16765.5 | 35.000 | 120 | 69 | 4 | 239 | 351 | 75 | 192 | 1.12e-11 | 63.9 |
| Msa0170300 | AT3G49630.2 | 28.743 | 167 | 111 | 5 | 171 | 334 | 63 | 224 | 2.07e-11 | 64.3 |
Find 106 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATAATAATTCCTTTAT+TGG | 0.101087 | 1_4:+54218639 | None:intergenic |
| ACTCTTCCTTGCACCCTTTC+AGG | 0.130980 | 1_4:-54218539 | Msa0170300:CDS |
| AAGAAATTGTCCATAATTTA+AGG | 0.181440 | 1_4:+54219050 | None:intergenic |
| TTCTTTGGTGCACTTCTCTT+TGG | 0.231602 | 1_4:-54218297 | Msa0170300:three_prime_UTR |
| TCAAAGAAAGTTAGAGCTTT+AGG | 0.232901 | 1_4:-54219138 | Msa0170300:CDS |
| AGAGATTTGGCCTTAAATTA+TGG | 0.248867 | 1_4:-54219060 | Msa0170300:CDS |
| GTTCAAGTTCAAGTTCAAAT+TGG | 0.253847 | 1_4:+54219741 | None:intergenic |
| CATACTGGCGGTATTTCTTC+TGG | 0.260269 | 1_4:+54219367 | None:intergenic |
| CTACTTTCTCATGGAGTTAG+AGG | 0.275776 | 1_4:-54219896 | Msa0170300:exon |
| TCATCAAAGTTCAAATTATA+AGG | 0.275842 | 1_4:+54218267 | None:intergenic |
| TCCTTCTCACCTTAGAGATT+TGG | 0.286711 | 1_4:-54219073 | Msa0170300:CDS |
| AGAAGTTCCCATCGTTAATT+CGG | 0.288729 | 1_4:+54218996 | None:intergenic |
| CCCATCGTTAATTCGGGTTC+AGG | 0.293269 | 1_4:+54219003 | None:intergenic |
| GAGCTATTCTCAGAAGCTTT+AGG | 0.296118 | 1_4:-54219102 | Msa0170300:CDS |
| AAGAAAATCCACCAATCTAT+AGG | 0.298151 | 1_4:-54218617 | Msa0170300:CDS |
| TGGTATTCCGGTTAGTGTTT+TGG | 0.298579 | 1_4:-54219569 | Msa0170300:CDS |
| TAGCAGCAGGGTCCCTAAAA+AGG | 0.302035 | 1_4:+54219437 | None:intergenic |
| CTCTAAGGTGAGAAGGATTA+AGG | 0.320379 | 1_4:+54219079 | None:intergenic |
| TTAGGGACCCTGCTGCTAAT+TGG | 0.334646 | 1_4:-54219432 | Msa0170300:CDS |
| AAAGTTCGATATTTCTCTAA+TGG | 0.338662 | 1_4:-54219463 | Msa0170300:CDS |
| TTGTGAATTAAGAATTAGTA+TGG | 0.350168 | 1_4:-54218516 | Msa0170300:exon |
| GGCGGTATTTCTTCTGGATT+GGG | 0.351699 | 1_4:+54219373 | None:intergenic |
| AGTGATTAATCATGGTATTC+CGG | 0.365484 | 1_4:-54219581 | Msa0170300:CDS |
| TGGCGGTATTTCTTCTGGAT+TGG | 0.371088 | 1_4:+54219372 | None:intergenic |
| TTCAAGTTCAAGTTCAAATT+GGG | 0.371169 | 1_4:+54219742 | None:intergenic |
| TGTTGTGGTGTTGTTGGACT+TGG | 0.377939 | 1_4:-54218481 | Msa0170300:three_prime_UTR |
| CAAGGTCCTTGGTCCAATAA+AGG | 0.378696 | 1_4:-54218652 | Msa0170300:CDS |
| GAAGTTCCCATCGTTAATTC+GGG | 0.383927 | 1_4:+54218997 | None:intergenic |
| AACAAATATTACCTGCATAC+TGG | 0.390463 | 1_4:+54219352 | None:intergenic |
| CTTGCATCCCTTGTATAGAA+TGG | 0.390636 | 1_4:+54219490 | None:intergenic |
| ATATCTTGAAGGTCTATGAT+AGG | 0.390808 | 1_4:+54219679 | None:intergenic |
| AAGTTCTTCATCAGAATCAA+TGG | 0.399345 | 1_4:-54218915 | Msa0170300:CDS |
| ATCAATTGTTGTGGTGTTGT+TGG | 0.403298 | 1_4:-54218487 | Msa0170300:three_prime_UTR |
| ATCTCATCCAAAACACTAAC+CGG | 0.405079 | 1_4:+54219562 | None:intergenic |
| TCAAGTTCAAATTGGGAGAA+TGG | 0.415040 | 1_4:+54219749 | None:intergenic |
| AGAAAATCCACCAATCTATA+GGG | 0.416314 | 1_4:-54218616 | Msa0170300:CDS |
| TCTTCTGGATTGGGAGGATC+GGG | 0.427658 | 1_4:+54219382 | None:intergenic |
| AATTTAAGGCCAAATCTCTA+AGG | 0.427976 | 1_4:+54219064 | None:intergenic |
| TTCTTCTGGATTGGGAGGAT+CGG | 0.429550 | 1_4:+54219381 | None:intergenic |
| AATTGTCATGAAATCAATAT+CGG | 0.432971 | 1_4:+54218966 | None:intergenic |
| TACTACTGTGAAAGAAGTCT+TGG | 0.435724 | 1_4:-54218592 | Msa0170300:CDS |
| GATTAGTGTTTATATCTTGA+AGG | 0.437519 | 1_4:+54219668 | None:intergenic |
| TCTTAATTCACAACCTGAAA+GGG | 0.442503 | 1_4:+54218526 | None:intergenic |
| CCATCGTTAATTCGGGTTCA+GGG | 0.453027 | 1_4:+54219004 | None:intergenic |
| AAGAAATACCGCCAGTATGC+AGG | 0.463915 | 1_4:-54219363 | Msa0170300:intron |
| ACAGTAGTATCCCTATAGAT+TGG | 0.466253 | 1_4:+54218606 | None:intergenic |
| GTGAAAGGCCTCTTAGAATC+TGG | 0.477165 | 1_4:-54219802 | Msa0170300:CDS |
| GAACTTGAAGACCACCAATC+TGG | 0.479431 | 1_4:+54218932 | None:intergenic |
| AAGCTAGCTATGGAAACTCT+AGG | 0.481857 | 1_4:+54218702 | None:intergenic |
| CTTTATTGGACCAAGGACCT+TGG | 0.485130 | 1_4:+54218653 | None:intergenic |
| CAAGGAAACCATTCTATACA+AGG | 0.487279 | 1_4:-54219498 | Msa0170300:CDS |
| TTCTTAATTCACAACCTGAA+AGG | 0.489670 | 1_4:+54218525 | None:intergenic |
| TTCTAAGAGGCCTTTCACGC+CGG | 0.492137 | 1_4:+54219807 | None:intergenic |
| GAAGATTCGAAGTGCATGTA+AGG | 0.497098 | 1_4:-54219620 | Msa0170300:CDS |
| TATGATAGGGACATTGAACT+TGG | 0.498593 | 1_4:+54219693 | None:intergenic |
| AGTTCTTCATCAGAATCAAT+GGG | 0.501988 | 1_4:-54218914 | Msa0170300:CDS |
| GAGTCCCTCCAATTAGCAGC+AGG | 0.508138 | 1_4:+54219424 | None:intergenic |
| GAGGTTTCATCCAAGGTCCT+TGG | 0.508636 | 1_4:-54218663 | Msa0170300:CDS |
| GGGACCCTGCTGCTAATTGG+AGG | 0.508894 | 1_4:-54219429 | Msa0170300:CDS |
| TTCCGCTGTTCTATCATATG+TGG | 0.516063 | 1_4:+54219855 | None:intergenic |
| TATCTTGAAGGTCTATGATA+GGG | 0.518400 | 1_4:+54219680 | None:intergenic |
| AGTACCTCAGCATGTAAAGA+TGG | 0.523143 | 1_4:+54219646 | None:intergenic |
| GTTCACAAGTGTTTACCATC+GGG | 0.530662 | 1_4:-54218745 | Msa0170300:CDS |
| TACATATTCCAGATTCTAAG+AGG | 0.531431 | 1_4:+54219794 | None:intergenic |
| ATTCTTCTACAAGACCAGAT+TGG | 0.532764 | 1_4:-54218946 | Msa0170300:CDS |
| TCGAAGTGCATGTAAGGAGT+GGG | 0.538796 | 1_4:-54219614 | Msa0170300:CDS |
| AATTCGGGTTCAGGGCATGC+AGG | 0.539005 | 1_4:+54219012 | None:intergenic |
| ACTACTGTGAAAGAAGTCTT+GGG | 0.544052 | 1_4:-54218591 | Msa0170300:CDS |
| TGTTCACAAGTGTTTACCAT+CGG | 0.545346 | 1_4:-54218746 | Msa0170300:CDS |
| GTTTGCAAAGAAGCTAGCTA+TGG | 0.548364 | 1_4:+54218692 | None:intergenic |
| GCCAAATCTCTAAGGTGAGA+AGG | 0.552197 | 1_4:+54219072 | None:intergenic |
| CTTCTTTGCAAACTCAGTAG+AGG | 0.552479 | 1_4:-54218682 | Msa0170300:CDS |
| GCAAGGAAGAGTTCCCATCA+AGG | 0.565323 | 1_4:+54218550 | None:intergenic |
| CATCTTGTTCATGAAACCTA+CGG | 0.566748 | 1_4:+54219527 | None:intergenic |
| CTCAGTAGAGGTTTCATCCA+AGG | 0.567334 | 1_4:-54218670 | Msa0170300:CDS |
| CTTCTACAAGACCAGATTGG+TGG | 0.574735 | 1_4:-54218943 | Msa0170300:CDS |
| AAACATCGGTGATCTTATGC+AGG | 0.578701 | 1_4:-54218857 | Msa0170300:intron |
| TGTTCTATCATATGTGGAAG+TGG | 0.581025 | 1_4:+54219861 | None:intergenic |
| ATAATTCCTTTATTGGACCA+AGG | 0.587453 | 1_4:+54218646 | None:intergenic |
| GGTATTTCTTCTGGATTGGG+AGG | 0.589039 | 1_4:+54219376 | None:intergenic |
| ATGAACAAGATGCTGATGCA+AGG | 0.589480 | 1_4:-54219516 | Msa0170300:CDS |
| CCCTGAACCCGAATTAACGA+TGG | 0.589960 | 1_4:-54219004 | Msa0170300:CDS |
| AGCTAGCTATGGAAACTCTA+GGG | 0.590641 | 1_4:+54218703 | None:intergenic |
| TCACAACCTGAAAGGGTGCA+AGG | 0.591043 | 1_4:+54218533 | None:intergenic |
| TTCGAAGTGCATGTAAGGAG+TGG | 0.595798 | 1_4:-54219615 | Msa0170300:CDS |
| GTAGTATCCCTATAGATTGG+TGG | 0.600698 | 1_4:+54218609 | None:intergenic |
| GTTGATGTTACTCCTCTGCA+TGG | 0.604954 | 1_4:-54218892 | Msa0170300:CDS |
| TCATATTAAAAGTGTACCTG+TGG | 0.612615 | 1_4:-54218341 | Msa0170300:three_prime_UTR |
| AGATGAGTCACTTTCATGAG+TGG | 0.612616 | 1_4:+54219717 | None:intergenic |
| TAATCCATCTTTACATGCTG+AGG | 0.617958 | 1_4:-54219650 | Msa0170300:CDS |
| CCTGAACCCGAATTAACGAT+GGG | 0.625562 | 1_4:-54219003 | Msa0170300:CDS |
| ATGGAGTTAGAGGCAAGTAA+TGG | 0.628115 | 1_4:-54219886 | Msa0170300:CDS |
| AGATGATTAGTGGAATCCGT+AGG | 0.632212 | 1_4:-54219543 | Msa0170300:CDS |
| GGACCCTGCTGCTAATTGGA+GGG | 0.634253 | 1_4:-54219428 | Msa0170300:CDS |
| GGATCTCTTGTTGTAAACAT+CGG | 0.635599 | 1_4:-54218871 | Msa0170300:CDS |
| CGAAGTGCATGTAAGGAGTG+GGG | 0.653285 | 1_4:-54219613 | Msa0170300:CDS |
| AGTCCCTCCAATTAGCAGCA+GGG | 0.660661 | 1_4:+54219425 | None:intergenic |
| TGGGAGAATGGAACATACGT+GGG | 0.666519 | 1_4:+54219761 | None:intergenic |
| AAGGAAACCATTCTATACAA+GGG | 0.666588 | 1_4:-54219497 | Msa0170300:CDS |
| AAATATTACCTGCATACTGG+CGG | 0.669573 | 1_4:+54219355 | None:intergenic |
| TTGGGAGAATGGAACATACG+TGG | 0.674537 | 1_4:+54219760 | None:intergenic |
| TGGAGCAGTATCAATTGTTG+TGG | 0.679090 | 1_4:-54218496 | Msa0170300:three_prime_UTR |
| AAGTTATTAAATGTAACCAC+AGG | 0.683519 | 1_4:+54218325 | None:intergenic |
| TATGCTTCGATAAAACCCGA+TGG | 0.683714 | 1_4:+54218730 | None:intergenic |
| ACAACAAGAGATCCATGCAG+AGG | 0.698408 | 1_4:+54218880 | None:intergenic |
| TTCCACATATGATAGAACAG+CGG | 0.752551 | 1_4:-54219857 | Msa0170300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTAATATTTGTTTTATTTTT+TGG | - | chr1_4:54218842-54218861 | Msa0170300:intron | 10.0% |
| !!! | GTAATATTTGTTTTATTTTT+TGG | - | chr1_4:54218842-54218861 | Msa0170300:intron | 10.0% |
| !!! | ATTTGTTTTATTTTTTGGAT+CGG | - | chr1_4:54218847-54218866 | Msa0170300:intron | 15.0% |
| !!! | TTAATAACTTTCATTTTCTT+TGG | - | chr1_4:54219871-54219890 | Msa0170300:CDS | 15.0% |
| !!! | ATTTGTTTTATTTTTTGGAT+CGG | - | chr1_4:54218847-54218866 | Msa0170300:intron | 15.0% |
| !!! | TTAATAACTTTCATTTTCTT+TGG | - | chr1_4:54219871-54219890 | Msa0170300:CDS | 15.0% |
| !!! | TTTTTTCAAGTGATTAATCA+TGG | - | chr1_4:54218594-54218613 | Msa0170300:CDS | 20.0% |
| !!! | TTTGTTTTATTTTTTGGATC+GGG | - | chr1_4:54218848-54218867 | Msa0170300:intron | 20.0% |
| !! | AAGAAATTGTCCATAATTTA+AGG | + | chr1_4:54219136-54219155 | None:intergenic | 20.0% |
| !! | AATTGTCATGAAATCAATAT+CGG | + | chr1_4:54219220-54219239 | None:intergenic | 20.0% |
| !! | TCTGATAATAATTCCTTTAT+TGG | + | chr1_4:54219547-54219566 | None:intergenic | 20.0% |
| !! | TTGTGAATTAAGAATTAGTA+TGG | - | chr1_4:54219667-54219686 | Msa0170300:CDS | 20.0% |
| !!! | TTTAGTCTTGCATTTTATTA+TGG | - | chr1_4:54219726-54219745 | Msa0170300:CDS | 20.0% |
| !! | TCATCAAAGTTCAAATTATA+AGG | + | chr1_4:54219919-54219938 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAGTGATTAATCA+TGG | - | chr1_4:54218594-54218613 | Msa0170300:CDS | 20.0% |
| !!! | TTTGTTTTATTTTTTGGATC+GGG | - | chr1_4:54218848-54218867 | Msa0170300:intron | 20.0% |
| !! | AAGAAATTGTCCATAATTTA+AGG | + | chr1_4:54219136-54219155 | None:intergenic | 20.0% |
| !! | AATTGTCATGAAATCAATAT+CGG | + | chr1_4:54219220-54219239 | None:intergenic | 20.0% |
| !! | TCTGATAATAATTCCTTTAT+TGG | + | chr1_4:54219547-54219566 | None:intergenic | 20.0% |
| !! | TTGTGAATTAAGAATTAGTA+TGG | - | chr1_4:54219667-54219686 | Msa0170300:CDS | 20.0% |
| !!! | TTTAGTCTTGCATTTTATTA+TGG | - | chr1_4:54219726-54219745 | Msa0170300:CDS | 20.0% |
| !! | TCATCAAAGTTCAAATTATA+AGG | + | chr1_4:54219919-54219938 | None:intergenic | 20.0% |
| !! | TATTTTCTTCTACTTTCTCA+TGG | - | chr1_4:54218278-54218297 | Msa0170300:three_prime_UTR | 25.0% |
| !! | TTCAAGTTCAAGTTCAAATT+GGG | + | chr1_4:54218444-54218463 | None:intergenic | 25.0% |
| ! | GATTAGTGTTTATATCTTGA+AGG | + | chr1_4:54218518-54218537 | None:intergenic | 25.0% |
| ! | AAAGTTCGATATTTCTCTAA+TGG | - | chr1_4:54218720-54218739 | Msa0170300:CDS | 25.0% |
| ! | TTGATGAGATGATTATGTAT+TGG | - | chr1_4:54219000-54219019 | Msa0170300:CDS | 25.0% |
| !!! | TTGGGACATTATTTTACAAA+AGG | - | chr1_4:54219610-54219629 | Msa0170300:CDS | 25.0% |
| !! | ACACTTTTAATATGAAGTGT+TGG | + | chr1_4:54219837-54219856 | None:intergenic | 25.0% |
| ! | AAGTTATTAAATGTAACCAC+AGG | + | chr1_4:54219861-54219880 | None:intergenic | 25.0% |
| !! | TATTTTCTTCTACTTTCTCA+TGG | - | chr1_4:54218278-54218297 | Msa0170300:three_prime_UTR | 25.0% |
| !! | TTCAAGTTCAAGTTCAAATT+GGG | + | chr1_4:54218444-54218463 | None:intergenic | 25.0% |
| ! | GATTAGTGTTTATATCTTGA+AGG | + | chr1_4:54218518-54218537 | None:intergenic | 25.0% |
| ! | AAAGTTCGATATTTCTCTAA+TGG | - | chr1_4:54218720-54218739 | Msa0170300:CDS | 25.0% |
| ! | TTGATGAGATGATTATGTAT+TGG | - | chr1_4:54219000-54219019 | Msa0170300:CDS | 25.0% |
| !!! | TTGGGACATTATTTTACAAA+AGG | - | chr1_4:54219610-54219629 | Msa0170300:CDS | 25.0% |
| !! | ACACTTTTAATATGAAGTGT+TGG | + | chr1_4:54219837-54219856 | None:intergenic | 25.0% |
| ! | AAGTTATTAAATGTAACCAC+AGG | + | chr1_4:54219861-54219880 | None:intergenic | 25.0% |
| TACATATTCCAGATTCTAAG+AGG | + | chr1_4:54218392-54218411 | None:intergenic | 30.0% | |
| ! | GTTCAAGTTCAAGTTCAAAT+TGG | + | chr1_4:54218445-54218464 | None:intergenic | 30.0% |
| TATCTTGAAGGTCTATGATA+GGG | + | chr1_4:54218506-54218525 | None:intergenic | 30.0% | |
| ATATCTTGAAGGTCTATGAT+AGG | + | chr1_4:54218507-54218526 | None:intergenic | 30.0% | |
| AGTGATTAATCATGGTATTC+CGG | - | chr1_4:54218602-54218621 | Msa0170300:CDS | 30.0% | |
| AAGGAAACCATTCTATACAA+GGG | - | chr1_4:54218686-54218705 | Msa0170300:CDS | 30.0% | |
| AACAAATATTACCTGCATAC+TGG | + | chr1_4:54218834-54218853 | None:intergenic | 30.0% | |
| CTTATGTACTTCACTTGTAA+AGG | - | chr1_4:54218953-54218972 | Msa0170300:CDS | 30.0% | |
| TAATCATCTCATCAAAGACA+AGG | + | chr1_4:54218995-54219014 | None:intergenic | 30.0% | |
| TCAAAGAAAGTTAGAGCTTT+AGG | - | chr1_4:54219045-54219064 | Msa0170300:CDS | 30.0% | |
| ! | AATTTAAGGCCAAATCTCTA+AGG | + | chr1_4:54219122-54219141 | None:intergenic | 30.0% |
| !! | AGAGATTTGGCCTTAAATTA+TGG | - | chr1_4:54219123-54219142 | Msa0170300:CDS | 30.0% |
| AAGTTCTTCATCAGAATCAA+TGG | - | chr1_4:54219268-54219287 | Msa0170300:intron | 30.0% | |
| AGTTCTTCATCAGAATCAAT+GGG | - | chr1_4:54219269-54219288 | Msa0170300:intron | 30.0% | |
| ATAATTCCTTTATTGGACCA+AGG | + | chr1_4:54219540-54219559 | None:intergenic | 30.0% | |
| AAGAAAATCCACCAATCTAT+AGG | - | chr1_4:54219566-54219585 | Msa0170300:CDS | 30.0% | |
| AGAAAATCCACCAATCTATA+GGG | - | chr1_4:54219567-54219586 | Msa0170300:CDS | 30.0% | |
| ! | TATTTTACAAAAGGCCTTGA+TGG | - | chr1_4:54219619-54219638 | Msa0170300:CDS | 30.0% |
| ! | ATTTTACAAAAGGCCTTGAT+GGG | - | chr1_4:54219620-54219639 | Msa0170300:CDS | 30.0% |
| TCTTAATTCACAACCTGAAA+GGG | + | chr1_4:54219660-54219679 | None:intergenic | 30.0% | |
| TTCTTAATTCACAACCTGAA+AGG | + | chr1_4:54219661-54219680 | None:intergenic | 30.0% | |
| ! | TCATATTAAAAGTGTACCTG+TGG | - | chr1_4:54219842-54219861 | Msa0170300:CDS | 30.0% |
| TACATATTCCAGATTCTAAG+AGG | + | chr1_4:54218392-54218411 | None:intergenic | 30.0% | |
| ! | GTTCAAGTTCAAGTTCAAAT+TGG | + | chr1_4:54218445-54218464 | None:intergenic | 30.0% |
| TATCTTGAAGGTCTATGATA+GGG | + | chr1_4:54218506-54218525 | None:intergenic | 30.0% | |
| ATATCTTGAAGGTCTATGAT+AGG | + | chr1_4:54218507-54218526 | None:intergenic | 30.0% | |
| AGTGATTAATCATGGTATTC+CGG | - | chr1_4:54218602-54218621 | Msa0170300:CDS | 30.0% | |
| AAGGAAACCATTCTATACAA+GGG | - | chr1_4:54218686-54218705 | Msa0170300:CDS | 30.0% | |
| AACAAATATTACCTGCATAC+TGG | + | chr1_4:54218834-54218853 | None:intergenic | 30.0% | |
| CTTATGTACTTCACTTGTAA+AGG | - | chr1_4:54218953-54218972 | Msa0170300:CDS | 30.0% | |
| TAATCATCTCATCAAAGACA+AGG | + | chr1_4:54218995-54219014 | None:intergenic | 30.0% | |
| TCAAAGAAAGTTAGAGCTTT+AGG | - | chr1_4:54219045-54219064 | Msa0170300:CDS | 30.0% | |
| ! | AATTTAAGGCCAAATCTCTA+AGG | + | chr1_4:54219122-54219141 | None:intergenic | 30.0% |
| !! | AGAGATTTGGCCTTAAATTA+TGG | - | chr1_4:54219123-54219142 | Msa0170300:CDS | 30.0% |
| AAGTTCTTCATCAGAATCAA+TGG | - | chr1_4:54219268-54219287 | Msa0170300:intron | 30.0% | |
| AGTTCTTCATCAGAATCAAT+GGG | - | chr1_4:54219269-54219288 | Msa0170300:intron | 30.0% | |
| ATAATTCCTTTATTGGACCA+AGG | + | chr1_4:54219540-54219559 | None:intergenic | 30.0% | |
| AAGAAAATCCACCAATCTAT+AGG | - | chr1_4:54219566-54219585 | Msa0170300:CDS | 30.0% | |
| AGAAAATCCACCAATCTATA+GGG | - | chr1_4:54219567-54219586 | Msa0170300:CDS | 30.0% | |
| ! | TATTTTACAAAAGGCCTTGA+TGG | - | chr1_4:54219619-54219638 | Msa0170300:CDS | 30.0% |
| ! | ATTTTACAAAAGGCCTTGAT+GGG | - | chr1_4:54219620-54219639 | Msa0170300:CDS | 30.0% |
| TCTTAATTCACAACCTGAAA+GGG | + | chr1_4:54219660-54219679 | None:intergenic | 30.0% | |
| TTCTTAATTCACAACCTGAA+AGG | + | chr1_4:54219661-54219680 | None:intergenic | 30.0% | |
| ! | TCATATTAAAAGTGTACCTG+TGG | - | chr1_4:54219842-54219861 | Msa0170300:CDS | 30.0% |
| TGTTCTATCATATGTGGAAG+TGG | + | chr1_4:54218325-54218344 | None:intergenic | 35.0% | |
| TTCCACATATGATAGAACAG+CGG | - | chr1_4:54218326-54218345 | Msa0170300:three_prime_UTR | 35.0% | |
| ! | GCCTTTGAAGAATCAAAAAC+CGG | - | chr1_4:54218357-54218376 | Msa0170300:three_prime_UTR | 35.0% |
| TCAAGTTCAAATTGGGAGAA+TGG | + | chr1_4:54218437-54218456 | None:intergenic | 35.0% | |
| TATGATAGGGACATTGAACT+TGG | + | chr1_4:54218493-54218512 | None:intergenic | 35.0% | |
| TAATCCATCTTTACATGCTG+AGG | - | chr1_4:54218533-54218552 | Msa0170300:CDS | 35.0% | |
| ATCTCATCCAAAACACTAAC+CGG | + | chr1_4:54218624-54218643 | None:intergenic | 35.0% | |
| !! | GTTTTGGATGAGATGATTAG+TGG | - | chr1_4:54218630-54218649 | Msa0170300:CDS | 35.0% |
| CATCTTGTTCATGAAACCTA+CGG | + | chr1_4:54218659-54218678 | None:intergenic | 35.0% | |
| CAAGGAAACCATTCTATACA+AGG | - | chr1_4:54218685-54218704 | Msa0170300:CDS | 35.0% | |
| ! | TCTCTAATGGTAGCCTTTTT+AGG | - | chr1_4:54218733-54218752 | Msa0170300:CDS | 35.0% |
| ! | CTCTAATGGTAGCCTTTTTA+GGG | - | chr1_4:54218734-54218753 | Msa0170300:CDS | 35.0% |
| AAATATTACCTGCATACTGG+CGG | + | chr1_4:54218831-54218850 | None:intergenic | 35.0% | |
| AGAAGTTCCCATCGTTAATT+CGG | + | chr1_4:54219190-54219209 | None:intergenic | 35.0% | |
| ATTCTTCTACAAGACCAGAT+TGG | - | chr1_4:54219237-54219256 | Msa0170300:intron | 35.0% | |
| ! | GGATCTCTTGTTGTAAACAT+CGG | - | chr1_4:54219312-54219331 | Msa0170300:intron | 35.0% |
| TGTTCACAAGTGTTTACCAT+CGG | - | chr1_4:54219437-54219456 | Msa0170300:CDS | 35.0% | |
| ACAGTAGTATCCCTATAGAT+TGG | + | chr1_4:54219580-54219599 | None:intergenic | 35.0% | |
| TACTACTGTGAAAGAAGTCT+TGG | - | chr1_4:54219591-54219610 | Msa0170300:CDS | 35.0% | |
| ACTACTGTGAAAGAAGTCTT+GGG | - | chr1_4:54219592-54219611 | Msa0170300:CDS | 35.0% | |
| !! | ATCAATTGTTGTGGTGTTGT+TGG | - | chr1_4:54219696-54219715 | Msa0170300:CDS | 35.0% |
| TGTTCTATCATATGTGGAAG+TGG | + | chr1_4:54218325-54218344 | None:intergenic | 35.0% | |
| TTCCACATATGATAGAACAG+CGG | - | chr1_4:54218326-54218345 | Msa0170300:three_prime_UTR | 35.0% | |
| ! | GCCTTTGAAGAATCAAAAAC+CGG | - | chr1_4:54218357-54218376 | Msa0170300:three_prime_UTR | 35.0% |
| TCAAGTTCAAATTGGGAGAA+TGG | + | chr1_4:54218437-54218456 | None:intergenic | 35.0% | |
| TATGATAGGGACATTGAACT+TGG | + | chr1_4:54218493-54218512 | None:intergenic | 35.0% | |
| TAATCCATCTTTACATGCTG+AGG | - | chr1_4:54218533-54218552 | Msa0170300:CDS | 35.0% | |
| ATCTCATCCAAAACACTAAC+CGG | + | chr1_4:54218624-54218643 | None:intergenic | 35.0% | |
| !! | GTTTTGGATGAGATGATTAG+TGG | - | chr1_4:54218630-54218649 | Msa0170300:CDS | 35.0% |
| CATCTTGTTCATGAAACCTA+CGG | + | chr1_4:54218659-54218678 | None:intergenic | 35.0% | |
| CAAGGAAACCATTCTATACA+AGG | - | chr1_4:54218685-54218704 | Msa0170300:CDS | 35.0% | |
| ! | TCTCTAATGGTAGCCTTTTT+AGG | - | chr1_4:54218733-54218752 | Msa0170300:CDS | 35.0% |
| ! | CTCTAATGGTAGCCTTTTTA+GGG | - | chr1_4:54218734-54218753 | Msa0170300:CDS | 35.0% |
| AAATATTACCTGCATACTGG+CGG | + | chr1_4:54218831-54218850 | None:intergenic | 35.0% | |
| AGAAGTTCCCATCGTTAATT+CGG | + | chr1_4:54219190-54219209 | None:intergenic | 35.0% | |
| ATTCTTCTACAAGACCAGAT+TGG | - | chr1_4:54219237-54219256 | Msa0170300:intron | 35.0% | |
| ! | GGATCTCTTGTTGTAAACAT+CGG | - | chr1_4:54219312-54219331 | Msa0170300:intron | 35.0% |
| TGTTCACAAGTGTTTACCAT+CGG | - | chr1_4:54219437-54219456 | Msa0170300:CDS | 35.0% | |
| ACAGTAGTATCCCTATAGAT+TGG | + | chr1_4:54219580-54219599 | None:intergenic | 35.0% | |
| TACTACTGTGAAAGAAGTCT+TGG | - | chr1_4:54219591-54219610 | Msa0170300:CDS | 35.0% | |
| ACTACTGTGAAAGAAGTCTT+GGG | - | chr1_4:54219592-54219611 | Msa0170300:CDS | 35.0% | |
| !! | ATCAATTGTTGTGGTGTTGT+TGG | - | chr1_4:54219696-54219715 | Msa0170300:CDS | 35.0% |
| CTACTTTCTCATGGAGTTAG+AGG | - | chr1_4:54218287-54218306 | Msa0170300:three_prime_UTR | 40.0% | |
| ATGGAGTTAGAGGCAAGTAA+TGG | - | chr1_4:54218297-54218316 | Msa0170300:three_prime_UTR | 40.0% | |
| TTCCGCTGTTCTATCATATG+TGG | + | chr1_4:54218331-54218350 | None:intergenic | 40.0% | |
| !! | GCCGGTTTTTGATTCTTCAA+AGG | + | chr1_4:54218361-54218380 | None:intergenic | 40.0% |
| ! | AGATGAGTCACTTTCATGAG+TGG | + | chr1_4:54218469-54218488 | None:intergenic | 40.0% |
| AGTACCTCAGCATGTAAAGA+TGG | + | chr1_4:54218540-54218559 | None:intergenic | 40.0% | |
| GAAGATTCGAAGTGCATGTA+AGG | - | chr1_4:54218563-54218582 | Msa0170300:CDS | 40.0% | |
| ! | TGGTATTCCGGTTAGTGTTT+TGG | - | chr1_4:54218614-54218633 | Msa0170300:CDS | 40.0% |
| AGATGATTAGTGGAATCCGT+AGG | - | chr1_4:54218640-54218659 | Msa0170300:CDS | 40.0% | |
| ATGAACAAGATGCTGATGCA+AGG | - | chr1_4:54218667-54218686 | Msa0170300:CDS | 40.0% | |
| CTTGCATCCCTTGTATAGAA+TGG | + | chr1_4:54218696-54218715 | None:intergenic | 40.0% | |
| GAGCTATTCTCAGAAGCTTT+AGG | - | chr1_4:54219081-54219100 | Msa0170300:CDS | 40.0% | |
| !! | CTCTAAGGTGAGAAGGATTA+AGG | + | chr1_4:54219107-54219126 | None:intergenic | 40.0% |
| TCCTTCTCACCTTAGAGATT+TGG | - | chr1_4:54219110-54219129 | Msa0170300:CDS | 40.0% | |
| GAAGTTCCCATCGTTAATTC+GGG | + | chr1_4:54219189-54219208 | None:intergenic | 40.0% | |
| AAACATCGGTGATCTTATGC+AGG | - | chr1_4:54219326-54219345 | Msa0170300:intron | 40.0% | |
| GTTCACAAGTGTTTACCATC+GGG | - | chr1_4:54219438-54219457 | Msa0170300:CDS | 40.0% | |
| TATGCTTCGATAAAACCCGA+TGG | + | chr1_4:54219456-54219475 | None:intergenic | 40.0% | |
| !! | CGGGTTTTATCGAAGCATAT+AGG | - | chr1_4:54219457-54219476 | Msa0170300:CDS | 40.0% |
| AGCTAGCTATGGAAACTCTA+GGG | + | chr1_4:54219483-54219502 | None:intergenic | 40.0% | |
| AAGCTAGCTATGGAAACTCT+AGG | + | chr1_4:54219484-54219503 | None:intergenic | 40.0% | |
| GTTTGCAAAGAAGCTAGCTA+TGG | + | chr1_4:54219494-54219513 | None:intergenic | 40.0% | |
| CTTCTTTGCAAACTCAGTAG+AGG | - | chr1_4:54219501-54219520 | Msa0170300:CDS | 40.0% | |
| GTAGTATCCCTATAGATTGG+TGG | + | chr1_4:54219577-54219596 | None:intergenic | 40.0% | |
| TGGAGCAGTATCAATTGTTG+TGG | - | chr1_4:54219687-54219706 | Msa0170300:CDS | 40.0% | |
| ! | TTCTTTGGTGCACTTCTCTT+TGG | - | chr1_4:54219886-54219905 | Msa0170300:CDS | 40.0% |
| CTACTTTCTCATGGAGTTAG+AGG | - | chr1_4:54218287-54218306 | Msa0170300:three_prime_UTR | 40.0% | |
| ATGGAGTTAGAGGCAAGTAA+TGG | - | chr1_4:54218297-54218316 | Msa0170300:three_prime_UTR | 40.0% | |
| TTCCGCTGTTCTATCATATG+TGG | + | chr1_4:54218331-54218350 | None:intergenic | 40.0% | |
| !! | GCCGGTTTTTGATTCTTCAA+AGG | + | chr1_4:54218361-54218380 | None:intergenic | 40.0% |
| ! | AGATGAGTCACTTTCATGAG+TGG | + | chr1_4:54218469-54218488 | None:intergenic | 40.0% |
| AGTACCTCAGCATGTAAAGA+TGG | + | chr1_4:54218540-54218559 | None:intergenic | 40.0% | |
| GAAGATTCGAAGTGCATGTA+AGG | - | chr1_4:54218563-54218582 | Msa0170300:CDS | 40.0% | |
| ! | TGGTATTCCGGTTAGTGTTT+TGG | - | chr1_4:54218614-54218633 | Msa0170300:CDS | 40.0% |
| AGATGATTAGTGGAATCCGT+AGG | - | chr1_4:54218640-54218659 | Msa0170300:CDS | 40.0% | |
| ATGAACAAGATGCTGATGCA+AGG | - | chr1_4:54218667-54218686 | Msa0170300:CDS | 40.0% | |
| CTTGCATCCCTTGTATAGAA+TGG | + | chr1_4:54218696-54218715 | None:intergenic | 40.0% | |
| GAGCTATTCTCAGAAGCTTT+AGG | - | chr1_4:54219081-54219100 | Msa0170300:CDS | 40.0% | |
| !! | CTCTAAGGTGAGAAGGATTA+AGG | + | chr1_4:54219107-54219126 | None:intergenic | 40.0% |
| TCCTTCTCACCTTAGAGATT+TGG | - | chr1_4:54219110-54219129 | Msa0170300:CDS | 40.0% | |
| GAAGTTCCCATCGTTAATTC+GGG | + | chr1_4:54219189-54219208 | None:intergenic | 40.0% | |
| AAACATCGGTGATCTTATGC+AGG | - | chr1_4:54219326-54219345 | Msa0170300:intron | 40.0% | |
| GTTCACAAGTGTTTACCATC+GGG | - | chr1_4:54219438-54219457 | Msa0170300:CDS | 40.0% | |
| TATGCTTCGATAAAACCCGA+TGG | + | chr1_4:54219456-54219475 | None:intergenic | 40.0% | |
| !! | CGGGTTTTATCGAAGCATAT+AGG | - | chr1_4:54219457-54219476 | Msa0170300:CDS | 40.0% |
| AGCTAGCTATGGAAACTCTA+GGG | + | chr1_4:54219483-54219502 | None:intergenic | 40.0% | |
| AAGCTAGCTATGGAAACTCT+AGG | + | chr1_4:54219484-54219503 | None:intergenic | 40.0% | |
| GTTTGCAAAGAAGCTAGCTA+TGG | + | chr1_4:54219494-54219513 | None:intergenic | 40.0% | |
| CTTCTTTGCAAACTCAGTAG+AGG | - | chr1_4:54219501-54219520 | Msa0170300:CDS | 40.0% | |
| GTAGTATCCCTATAGATTGG+TGG | + | chr1_4:54219577-54219596 | None:intergenic | 40.0% | |
| TGGAGCAGTATCAATTGTTG+TGG | - | chr1_4:54219687-54219706 | Msa0170300:CDS | 40.0% | |
| ! | TTCTTTGGTGCACTTCTCTT+TGG | - | chr1_4:54219886-54219905 | Msa0170300:CDS | 40.0% |
| GAATCAAAAACCGGCGTGAA+AGG | - | chr1_4:54218366-54218385 | Msa0170300:three_prime_UTR | 45.0% | |
| GTGAAAGGCCTCTTAGAATC+TGG | - | chr1_4:54218381-54218400 | Msa0170300:three_prime_UTR | 45.0% | |
| TGGGAGAATGGAACATACGT+GGG | + | chr1_4:54218425-54218444 | None:intergenic | 45.0% | |
| TTGGGAGAATGGAACATACG+TGG | + | chr1_4:54218426-54218445 | None:intergenic | 45.0% | |
| TTCGAAGTGCATGTAAGGAG+TGG | - | chr1_4:54218568-54218587 | Msa0170300:CDS | 45.0% | |
| TCGAAGTGCATGTAAGGAGT+GGG | - | chr1_4:54218569-54218588 | Msa0170300:CDS | 45.0% | |
| ! | TTCTTCTGGATTGGGAGGAT+CGG | + | chr1_4:54218805-54218824 | None:intergenic | 45.0% |
| ! | GGTATTTCTTCTGGATTGGG+AGG | + | chr1_4:54218810-54218829 | None:intergenic | 45.0% |
| GGCGGTATTTCTTCTGGATT+GGG | + | chr1_4:54218813-54218832 | None:intergenic | 45.0% | |
| TGGCGGTATTTCTTCTGGAT+TGG | + | chr1_4:54218814-54218833 | None:intergenic | 45.0% | |
| CATACTGGCGGTATTTCTTC+TGG | + | chr1_4:54218819-54218838 | None:intergenic | 45.0% | |
| AAGAAATACCGCCAGTATGC+AGG | - | chr1_4:54218820-54218839 | Msa0170300:intron | 45.0% | |
| !! | GCCAAATCTCTAAGGTGAGA+AGG | + | chr1_4:54219114-54219133 | None:intergenic | 45.0% |
| ! | CCATCGTTAATTCGGGTTCA+GGG | + | chr1_4:54219182-54219201 | None:intergenic | 45.0% |
| CCTGAACCCGAATTAACGAT+GGG | - | chr1_4:54219180-54219199 | Msa0170300:intron | 45.0% | |
| CTTCTACAAGACCAGATTGG+TGG | - | chr1_4:54219240-54219259 | Msa0170300:intron | 45.0% | |
| GAACTTGAAGACCACCAATC+TGG | + | chr1_4:54219254-54219273 | None:intergenic | 45.0% | |
| GTTGATGTTACTCCTCTGCA+TGG | - | chr1_4:54219291-54219310 | Msa0170300:intron | 45.0% | |
| ACAACAAGAGATCCATGCAG+AGG | + | chr1_4:54219306-54219325 | None:intergenic | 45.0% | |
| CTCAGTAGAGGTTTCATCCA+AGG | - | chr1_4:54219513-54219532 | Msa0170300:CDS | 45.0% | |
| CTTTATTGGACCAAGGACCT+TGG | + | chr1_4:54219533-54219552 | None:intergenic | 45.0% | |
| CAAGGTCCTTGGTCCAATAA+AGG | - | chr1_4:54219531-54219550 | Msa0170300:CDS | 45.0% | |
| !! | TGTTGTGGTGTTGTTGGACT+TGG | - | chr1_4:54219702-54219721 | Msa0170300:CDS | 45.0% |
| GAATCAAAAACCGGCGTGAA+AGG | - | chr1_4:54218366-54218385 | Msa0170300:three_prime_UTR | 45.0% | |
| GTGAAAGGCCTCTTAGAATC+TGG | - | chr1_4:54218381-54218400 | Msa0170300:three_prime_UTR | 45.0% | |
| TGGGAGAATGGAACATACGT+GGG | + | chr1_4:54218425-54218444 | None:intergenic | 45.0% | |
| TTGGGAGAATGGAACATACG+TGG | + | chr1_4:54218426-54218445 | None:intergenic | 45.0% | |
| TTCGAAGTGCATGTAAGGAG+TGG | - | chr1_4:54218568-54218587 | Msa0170300:CDS | 45.0% | |
| TCGAAGTGCATGTAAGGAGT+GGG | - | chr1_4:54218569-54218588 | Msa0170300:CDS | 45.0% | |
| ! | TTCTTCTGGATTGGGAGGAT+CGG | + | chr1_4:54218805-54218824 | None:intergenic | 45.0% |
| ! | GGTATTTCTTCTGGATTGGG+AGG | + | chr1_4:54218810-54218829 | None:intergenic | 45.0% |
| GGCGGTATTTCTTCTGGATT+GGG | + | chr1_4:54218813-54218832 | None:intergenic | 45.0% | |
| TGGCGGTATTTCTTCTGGAT+TGG | + | chr1_4:54218814-54218833 | None:intergenic | 45.0% | |
| CATACTGGCGGTATTTCTTC+TGG | + | chr1_4:54218819-54218838 | None:intergenic | 45.0% | |
| AAGAAATACCGCCAGTATGC+AGG | - | chr1_4:54218820-54218839 | Msa0170300:intron | 45.0% | |
| !! | GCCAAATCTCTAAGGTGAGA+AGG | + | chr1_4:54219114-54219133 | None:intergenic | 45.0% |
| ! | CCATCGTTAATTCGGGTTCA+GGG | + | chr1_4:54219182-54219201 | None:intergenic | 45.0% |
| CCTGAACCCGAATTAACGAT+GGG | - | chr1_4:54219180-54219199 | Msa0170300:intron | 45.0% | |
| CTTCTACAAGACCAGATTGG+TGG | - | chr1_4:54219240-54219259 | Msa0170300:intron | 45.0% | |
| GAACTTGAAGACCACCAATC+TGG | + | chr1_4:54219254-54219273 | None:intergenic | 45.0% | |
| GTTGATGTTACTCCTCTGCA+TGG | - | chr1_4:54219291-54219310 | Msa0170300:intron | 45.0% | |
| ACAACAAGAGATCCATGCAG+AGG | + | chr1_4:54219306-54219325 | None:intergenic | 45.0% | |
| CTCAGTAGAGGTTTCATCCA+AGG | - | chr1_4:54219513-54219532 | Msa0170300:CDS | 45.0% | |
| CTTTATTGGACCAAGGACCT+TGG | + | chr1_4:54219533-54219552 | None:intergenic | 45.0% | |
| CAAGGTCCTTGGTCCAATAA+AGG | - | chr1_4:54219531-54219550 | Msa0170300:CDS | 45.0% | |
| !! | TGTTGTGGTGTTGTTGGACT+TGG | - | chr1_4:54219702-54219721 | Msa0170300:CDS | 45.0% |
| ! | TTCTAAGAGGCCTTTCACGC+CGG | + | chr1_4:54218379-54218398 | None:intergenic | 50.0% |
| CGAAGTGCATGTAAGGAGTG+GGG | - | chr1_4:54218570-54218589 | Msa0170300:CDS | 50.0% | |
| TAGCAGCAGGGTCCCTAAAA+AGG | + | chr1_4:54218749-54218768 | None:intergenic | 50.0% | |
| TTAGGGACCCTGCTGCTAAT+TGG | - | chr1_4:54218751-54218770 | Msa0170300:CDS | 50.0% | |
| AGTCCCTCCAATTAGCAGCA+GGG | + | chr1_4:54218761-54218780 | None:intergenic | 50.0% | |
| ! | TCTTCTGGATTGGGAGGATC+GGG | + | chr1_4:54218804-54218823 | None:intergenic | 50.0% |
| CCCTGAACCCGAATTAACGA+TGG | - | chr1_4:54219179-54219198 | Msa0170300:intron | 50.0% | |
| ! | CCCATCGTTAATTCGGGTTC+AGG | + | chr1_4:54219183-54219202 | None:intergenic | 50.0% |
| GAGGTTTCATCCAAGGTCCT+TGG | - | chr1_4:54219520-54219539 | Msa0170300:CDS | 50.0% | |
| GCAAGGAAGAGTTCCCATCA+AGG | + | chr1_4:54219636-54219655 | None:intergenic | 50.0% | |
| ACTCTTCCTTGCACCCTTTC+AGG | - | chr1_4:54219644-54219663 | Msa0170300:CDS | 50.0% | |
| ! | TCACAACCTGAAAGGGTGCA+AGG | + | chr1_4:54219653-54219672 | None:intergenic | 50.0% |
| ! | TTCTAAGAGGCCTTTCACGC+CGG | + | chr1_4:54218379-54218398 | None:intergenic | 50.0% |
| CGAAGTGCATGTAAGGAGTG+GGG | - | chr1_4:54218570-54218589 | Msa0170300:CDS | 50.0% | |
| TAGCAGCAGGGTCCCTAAAA+AGG | + | chr1_4:54218749-54218768 | None:intergenic | 50.0% | |
| TTAGGGACCCTGCTGCTAAT+TGG | - | chr1_4:54218751-54218770 | Msa0170300:CDS | 50.0% | |
| AGTCCCTCCAATTAGCAGCA+GGG | + | chr1_4:54218761-54218780 | None:intergenic | 50.0% | |
| ! | TCTTCTGGATTGGGAGGATC+GGG | + | chr1_4:54218804-54218823 | None:intergenic | 50.0% |
| CCCTGAACCCGAATTAACGA+TGG | - | chr1_4:54219179-54219198 | Msa0170300:intron | 50.0% | |
| ! | CCCATCGTTAATTCGGGTTC+AGG | + | chr1_4:54219183-54219202 | None:intergenic | 50.0% |
| GAGGTTTCATCCAAGGTCCT+TGG | - | chr1_4:54219520-54219539 | Msa0170300:CDS | 50.0% | |
| GCAAGGAAGAGTTCCCATCA+AGG | + | chr1_4:54219636-54219655 | None:intergenic | 50.0% | |
| ACTCTTCCTTGCACCCTTTC+AGG | - | chr1_4:54219644-54219663 | Msa0170300:CDS | 50.0% | |
| ! | TCACAACCTGAAAGGGTGCA+AGG | + | chr1_4:54219653-54219672 | None:intergenic | 50.0% |
| GGACCCTGCTGCTAATTGGA+GGG | - | chr1_4:54218755-54218774 | Msa0170300:CDS | 55.0% | |
| GAGTCCCTCCAATTAGCAGC+AGG | + | chr1_4:54218762-54218781 | None:intergenic | 55.0% | |
| ! | AATTCGGGTTCAGGGCATGC+AGG | + | chr1_4:54219174-54219193 | None:intergenic | 55.0% |
| GGACCCTGCTGCTAATTGGA+GGG | - | chr1_4:54218755-54218774 | Msa0170300:CDS | 55.0% | |
| GAGTCCCTCCAATTAGCAGC+AGG | + | chr1_4:54218762-54218781 | None:intergenic | 55.0% | |
| ! | AATTCGGGTTCAGGGCATGC+AGG | + | chr1_4:54219174-54219193 | None:intergenic | 55.0% |
| GGGACCCTGCTGCTAATTGG+AGG | - | chr1_4:54218754-54218773 | Msa0170300:CDS | 60.0% | |
| GGGACCCTGCTGCTAATTGG+AGG | - | chr1_4:54218754-54218773 | Msa0170300:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 54218266 | 54219939 | 54218266 | ID=Msa0170300;Name=Msa0170300 |
| chr1_4 | mRNA | 54218266 | 54219939 | 54218266 | ID=Msa0170300-mRNA-1;Parent=Msa0170300;Name=Msa0170300-mRNA-1;_AED=0.39;_eAED=0.39;_QI=31|1|1|1|1|1|3|267|372 |
| chr1_4 | exon | 54218266 | 54218784 | 54218266 | ID=Msa0170300-mRNA-1:exon:16195;Parent=Msa0170300-mRNA-1 |
| chr1_4 | exon | 54218858 | 54219179 | 54218858 | ID=Msa0170300-mRNA-1:exon:16194;Parent=Msa0170300-mRNA-1 |
| chr1_4 | exon | 54219364 | 54219939 | 54219364 | ID=Msa0170300-mRNA-1:exon:16193;Parent=Msa0170300-mRNA-1 |
| chr1_4 | five_prime_UTR | 54219909 | 54219939 | 54219909 | ID=Msa0170300-mRNA-1:five_prime_utr;Parent=Msa0170300-mRNA-1 |
| chr1_4 | CDS | 54219364 | 54219908 | 54219364 | ID=Msa0170300-mRNA-1:cds;Parent=Msa0170300-mRNA-1 |
| chr1_4 | CDS | 54218858 | 54219179 | 54218858 | ID=Msa0170300-mRNA-1:cds;Parent=Msa0170300-mRNA-1 |
| chr1_4 | CDS | 54218533 | 54218784 | 54218533 | ID=Msa0170300-mRNA-1:cds;Parent=Msa0170300-mRNA-1 |
| chr1_4 | three_prime_UTR | 54218266 | 54218532 | 54218266 | ID=Msa0170300-mRNA-1:three_prime_utr;Parent=Msa0170300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
