AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0966590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0966590 MtrunA17_Chr6g0487561 92.487 386 19 1 31 406 2 387 0.0 700
Msa0966590 MtrunA17_Chr6g0487571 86.022 372 42 1 39 400 1 372 0.0 651
Msa0966590 MtrunA17_Chr8g0341351 41.813 342 187 7 69 406 56 389 4.54e-80 252
Msa0966590 MtrunA17_Chr2g0330591 42.204 372 187 9 46 399 5 366 1.00e-79 263
Msa0966590 MtrunA17_Chr8g0341151 41.979 374 192 9 47 406 8 370 1.20e-78 259
Msa0966590 MtrunA17_Chr8g0341011 41.322 363 189 7 57 406 24 375 2.48e-77 256
Msa0966590 MtrunA17_Chr8g0341231 42.450 351 186 8 64 406 58 400 1.06e-76 248
Msa0966590 MtrunA17_Chr8g0340941 39.788 377 199 10 47 406 5 370 8.77e-76 244
Msa0966590 MtrunA17_Chr8g0341141 38.624 378 212 8 43 406 5 376 2.82e-74 240
Msa0966590 MtrunA17_Chr8g0341271 44.369 293 156 4 110 400 8 295 3.04e-74 233
Msa0966590 MtrunA17_Chr8g0340881 39.523 377 207 8 43 406 10 378 5.52e-73 244
Msa0966590 MtrunA17_Chr8g0340931 39.683 378 207 7 43 406 4 374 5.86e-73 244
Msa0966590 MtrunA17_Chr8g0340871 39.267 382 207 8 43 406 6 380 2.48e-70 237
Msa0966590 MtrunA17_Chr8g0340911 38.845 381 211 7 38 406 5 375 2.70e-69 234
Msa0966590 MtrunA17_Chr8g0340891 36.883 385 212 8 38 406 5 374 7.86e-65 222
Msa0966590 MtrunA17_Chr8g0347661 36.528 386 220 9 38 406 5 382 5.25e-63 217
Msa0966590 MtrunA17_Chr8g0340961 36.389 360 185 8 43 385 1 333 2.03e-57 191
Msa0966590 MtrunA17_Chr8g0341061 37.604 359 187 14 69 399 70 419 1.02e-54 193
Msa0966590 MtrunA17_Chr8g0341091 36.538 364 189 15 67 399 64 416 1.40e-50 180
Msa0966590 MtrunA17_Chr8g0341101 34.417 369 201 10 70 406 70 429 1.67e-47 174
Msa0966590 MtrunA17_Chr5g0423881 34.884 344 203 9 70 400 74 409 1.43e-46 165
Msa0966590 MtrunA17_Chr8g0358831 33.244 373 174 12 45 399 20 335 1.25e-45 168
Msa0966590 MtrunA17_Chr2g0330611 40.952 210 101 5 44 239 3 203 7.53e-42 147
Msa0966590 MtrunA17_Chr6g0479311 33.025 324 193 12 70 387 37 342 3.65e-39 147
Msa0966590 MtrunA17_Chr8g0341201 44.720 161 82 3 122 279 10 166 4.87e-35 127
Msa0966590 MtrunA17_Chr7g0263591 34.130 293 166 10 113 384 79 365 1.45e-29 121
Msa0966590 MtrunA17_Chr1g0181731 31.229 301 166 8 113 384 73 361 1.33e-28 118
Msa0966590 MtrunA17_Chr8g0341111 43.226 155 78 3 68 217 65 214 1.34e-28 118
Msa0966590 MtrunA17_Chr3g0123141 28.571 343 198 10 70 384 37 360 2.62e-28 117
Msa0966590 MtrunA17_Chr1g0205741 26.807 332 213 13 79 398 43 356 5.39e-21 94.7
Msa0966590 MtrunA17_Chr7g0236881 30.769 286 160 13 72 341 39 302 8.54e-17 82.8
Msa0966590 MtrunA17_Chr2g0330621 37.692 130 78 2 278 406 14 141 9.89e-17 78.6
Msa0966590 MtrunA17_Chr4g0044931 32.164 171 94 7 77 236 20 179 1.25e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0966590 AT4G29180.2 53.022 364 160 2 47 399 8 371 3.77e-132 402
Msa0966590 AT4G29180.3 53.022 364 160 2 47 399 8 371 3.95e-132 402
Msa0966590 AT4G29180.1 53.022 364 160 2 47 399 8 371 4.05e-132 402
Msa0966590 AT4G29450.1 56.145 358 144 5 55 399 15 372 1.03e-127 389
Msa0966590 AT4G29990.2 40.108 369 199 7 47 399 4 366 3.65e-81 264
Msa0966590 AT4G29990.1 40.108 369 199 7 47 399 4 366 3.93e-80 264
Msa0966590 AT2G19210.1 39.096 376 209 7 38 399 2 371 8.27e-78 258
Msa0966590 AT1G05700.2 43.023 344 164 9 70 400 44 368 7.41e-76 253
Msa0966590 AT1G05700.1 43.023 344 164 9 70 400 44 368 7.55e-76 252
Msa0966590 AT2G19230.2 38.781 361 199 8 55 399 18 372 1.31e-71 241
Msa0966590 AT2G19230.1 38.781 361 199 8 55 399 18 372 7.87e-71 241
Msa0966590 AT1G51880.1 37.135 377 214 7 44 406 6 373 5.27e-69 234
Msa0966590 AT1G51880.3 37.135 377 214 7 44 406 24 391 7.08e-69 234
Msa0966590 AT1G51880.2 37.135 377 214 7 44 406 24 391 8.37e-69 233
Msa0966590 AT1G51790.3 39.714 350 194 8 64 406 37 376 1.89e-66 227
Msa0966590 AT1G51790.1 39.714 350 194 8 64 406 37 376 1.89e-66 227
Msa0966590 AT2G19190.1 37.105 380 211 10 38 399 2 371 2.41e-66 226
Msa0966590 AT1G51790.2 39.714 350 194 8 64 406 37 376 4.29e-66 226
Msa0966590 AT1G51910.1 36.243 378 217 7 44 406 6 374 1.26e-63 219
Msa0966590 AT1G51800.1 35.200 375 216 9 39 399 1 362 1.88e-62 216
Msa0966590 AT5G59680.1 36.735 343 198 6 70 406 44 373 2.25e-62 216
Msa0966590 AT1G49100.1 37.685 337 192 7 70 399 44 369 4.90e-62 215
Msa0966590 AT3G46400.1 36.705 346 204 7 66 406 39 374 1.10e-61 214
Msa0966590 AT1G51890.3 34.840 376 222 7 45 406 3 369 1.71e-61 211
Msa0966590 AT3G46340.1 34.759 374 220 7 41 399 5 369 4.36e-61 212
Msa0966590 AT1G51890.1 34.840 376 222 7 45 406 3 369 9.54e-61 211
Msa0966590 AT1G51890.2 34.840 376 222 7 45 406 3 369 1.17e-60 211
Msa0966590 AT2G14440.1 34.817 382 216 10 45 406 7 375 5.28e-60 209
Msa0966590 AT1G51860.1 36.074 377 217 8 45 406 7 374 7.69e-60 209
Msa0966590 AT3G46330.2 34.555 382 218 10 45 406 6 375 4.23e-59 206
Msa0966590 AT3G46330.1 34.555 382 218 10 45 406 6 375 4.65e-59 206
Msa0966590 AT5G59650.1 35.925 373 206 8 53 406 15 373 2.03e-58 205
Msa0966590 AT2G28990.2 34.783 368 217 6 46 399 3 361 2.14e-58 205
Msa0966590 AT2G28990.1 34.783 368 217 6 46 399 3 361 2.14e-58 205
Msa0966590 AT3G21340.2 35.310 371 209 10 47 399 13 370 4.94e-58 201
Msa0966590 AT5G59670.2 35.942 345 207 7 66 406 39 373 6.45e-58 203
Msa0966590 AT5G59670.1 35.942 345 207 7 66 406 39 373 6.45e-58 203
Msa0966590 AT1G51820.1 36.056 355 201 7 58 399 17 358 2.59e-57 202
Msa0966590 AT3G21340.1 35.135 370 211 9 47 399 13 370 3.14e-57 201
Msa0966590 AT1G07550.1 34.808 339 211 4 70 406 43 373 3.74e-57 201
Msa0966590 AT5G59650.2 36.236 356 194 8 53 389 15 356 9.64e-57 200
Msa0966590 AT1G51870.1 34.840 376 221 8 46 406 8 374 1.25e-56 199
Msa0966590 AT1G51870.2 34.840 376 221 8 46 406 8 374 1.74e-56 199
Msa0966590 AT1G51850.2 35.211 355 204 8 58 399 17 358 5.51e-56 198
Msa0966590 AT2G14510.1 33.333 369 224 7 45 399 7 367 1.38e-55 197
Msa0966590 AT2G14510.2 33.333 369 224 7 45 399 15 375 1.63e-55 196
Msa0966590 AT1G51805.1 36.337 344 195 10 70 406 40 366 2.60e-55 196
Msa0966590 AT1G07560.1 34.897 341 207 6 64 399 38 368 1.16e-54 194
Msa0966590 AT3G46420.1 35.904 376 216 7 47 406 7 373 1.38e-54 194
Msa0966590 AT2G04300.2 34.031 382 225 9 42 406 7 378 4.11e-54 193
Msa0966590 AT2G29000.1 34.127 378 216 11 39 399 1 362 1.87e-52 188
Msa0966590 AT4G20450.2 32.398 392 225 12 47 406 10 393 5.74e-52 187
Msa0966590 AT4G20450.1 32.398 392 225 12 47 406 10 393 6.72e-52 186
Msa0966590 AT1G51850.1 34.085 355 188 8 58 399 17 338 1.83e-51 185
Msa0966590 AT3G46370.2 38.062 289 171 6 121 406 2 285 5.38e-50 181
Msa0966590 AT3G46370.1 38.062 289 171 6 121 406 2 285 5.38e-50 181
Msa0966590 AT2G28960.2 34.916 358 202 9 48 387 8 352 3.16e-48 176
Msa0966590 AT1G51805.2 33.431 341 185 8 70 406 40 342 5.67e-48 175
Msa0966590 AT3G46350.1 35.938 320 168 9 49 347 12 315 1.77e-47 168
Msa0966590 AT2G04300.1 34.513 339 193 9 42 365 7 331 1.42e-45 168
Msa0966590 AT5G16900.2 32.181 376 217 12 49 399 8 370 5.35e-42 156
Msa0966590 AT5G16900.1 32.181 376 217 12 49 399 8 370 2.88e-41 156
Msa0966590 AT5G16900.3 32.181 376 217 12 49 399 8 370 2.88e-41 156
Msa0966590 AT1G51810.1 35.484 248 148 6 163 406 1 240 2.54e-35 138
Msa0966590 AT1G51860.2 36.207 232 140 5 179 406 3 230 8.54e-33 131
Msa0966590 AT5G59660.2 34.247 292 138 10 113 399 42 284 1.64e-31 127
Msa0966590 AT2G28970.2 35.217 230 143 3 179 406 11 236 1.69e-31 127
Msa0966590 AT1G24485.4 27.841 352 228 11 46 387 11 346 2.05e-29 119
Msa0966590 AT1G67720.1 29.971 347 188 11 70 384 37 360 3.49e-29 120
Msa0966590 AT1G24485.1 27.841 352 228 11 46 387 11 346 4.09e-29 118
Msa0966590 AT1G24485.2 27.841 352 228 11 46 387 11 346 6.56e-29 118
Msa0966590 AT1G24485.3 27.841 352 228 11 46 387 11 346 1.06e-28 118
Msa0966590 AT1G51840.2 38.286 175 88 4 58 221 24 189 2.45e-28 110
Msa0966590 AT1G51840.5 38.286 175 88 4 58 221 24 189 2.45e-28 110
Msa0966590 AT1G51840.4 38.286 175 88 4 58 221 24 189 2.45e-28 110
Msa0966590 AT1G51840.3 38.286 175 88 4 58 221 24 189 2.45e-28 110
Msa0966590 AT1G51840.1 38.286 175 88 4 58 221 24 189 2.45e-28 110
Msa0966590 AT3G46260.1 28.916 332 206 11 70 387 39 354 2.58e-28 115
Msa0966590 AT1G51890.4 34.091 220 138 4 190 406 90 305 3.89e-28 117
Msa0966590 AT3G46280.1 31.973 294 175 12 109 387 65 348 2.03e-27 114
Msa0966590 AT3G46270.1 29.945 364 217 15 46 387 7 354 8.55e-27 112
Msa0966590 AT3G46270.2 29.945 364 217 15 46 387 15 362 9.32e-27 112
Msa0966590 AT2G37050.4 31.803 305 163 13 111 384 72 362 3.54e-26 111
Msa0966590 AT2G37050.2 31.803 305 163 13 111 384 72 362 3.60e-26 111
Msa0966590 AT2G37050.1 31.803 305 163 13 111 384 72 362 4.38e-26 111
Msa0966590 AT2G37050.3 31.803 305 163 13 111 384 72 362 4.55e-26 111
Msa0966590 AT3G19230.1 28.869 336 200 12 76 392 37 352 2.68e-25 108
Msa0966590 AT2G28960.1 32.759 232 137 6 163 387 1 220 5.30e-25 107
Msa0966590 AT3G46240.1 29.595 321 184 10 73 389 18 300 7.71e-25 105
Msa0966590 AT1G51830.2 36.364 165 102 2 237 399 13 176 9.42e-25 107
Msa0966590 AT1G51830.1 36.364 165 102 2 237 399 6 169 9.96e-25 107
Msa0966590 AT5G59660.1 28.042 378 168 13 39 399 16 306 2.39e-24 106
Msa0966590 AT5G59660.3 28.042 378 168 13 39 399 16 306 2.51e-24 105
Msa0966590 AT2G28970.1 35.928 167 104 2 242 406 106 271 4.69e-23 102
Msa0966590 AT5G48740.1 28.483 323 204 14 77 390 37 341 1.58e-20 94.7
Msa0966590 AT3G05990.1 25.680 331 214 13 78 392 44 358 1.72e-15 78.6
Msa0966590 AT5G59616.1 34.862 109 69 1 300 406 3 111 1.07e-13 68.9
Msa0966590 AT5G16900.4 29.775 178 106 6 237 399 11 184 4.30e-13 71.6
Msa0966590 AT1G28340.1 24.768 323 209 12 92 387 50 365 2.68e-11 65.9

Find 59 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATGTTGGTGTAAATTTC+TGG 0.160577 6_3:-95116783 Msa0966590:CDS
TATACATTGAATTTCAAATT+TGG 0.176424 6_3:+95116340 None:intergenic
ACGATGTTTACGATAGAATT+TGG 0.218503 6_3:-95116519 Msa0966590:CDS
CACAAGGCTCCTCTTATTCT+TGG 0.235747 6_3:-95118072 Msa0966590:CDS
TGGGACATTGGTTCATTTAA+TGG 0.238692 6_3:-95116559 Msa0966590:CDS
AAGGAATGAGAATGATAATT+TGG 0.258969 6_3:-95116386 Msa0966590:CDS
TGAAATTCTATAATGATGTT+AGG 0.269396 6_3:+95118093 None:intergenic
AACCACCATTTGAAGTTATT+AGG 0.288140 6_3:-95116423 Msa0966590:CDS
TTAATTCCTGTTTGTATGTA+AGG 0.293676 6_3:+95117003 None:intergenic
AGTTCCAATGCTGAGATAAA+AGG 0.299439 6_3:+95116652 None:intergenic
TCTATTTATAAAACTGAGTT+TGG 0.305953 6_3:-95116613 Msa0966590:CDS
ATAAGAGCTTCTTTCTTGTA+TGG 0.317064 6_3:-95116844 Msa0966590:CDS
TGAGAGAATTCAACGTATCT+TGG 0.347148 6_3:-95116276 Msa0966590:CDS
CAATTAATCGGTAACAGTTC+CGG 0.348124 6_3:+95116893 None:intergenic
CTGAGATCTGAGAGTGGATA+TGG 0.352130 6_3:+95116934 None:intergenic
AATGTTTGCCTTGTGAATAA+AGG 0.363230 6_3:-95116685 Msa0966590:CDS
AAAATCGATGTTAGTGAAGA+TGG 0.375185 6_3:-95116451 Msa0966590:CDS
CGATTAATTGCCGGAACAAA+AGG 0.383758 6_3:-95116880 Msa0966590:CDS
AACTGTTACCGATTAATTGC+CGG 0.390663 6_3:-95116889 Msa0966590:CDS
AAATTATCATTCTCATTCCT+TGG 0.410948 6_3:+95116388 None:intergenic
AGGTGGAAGTGTTGAATCTT+CGG 0.415841 6_3:+95116144 None:intergenic
CCAGTGATGACAAATTCAAT+TGG 0.427066 6_3:-95118048 Msa0966590:CDS
GAGAGTGGATATGGTAGATT+AGG 0.427233 6_3:+95116943 None:intergenic
CCAATTGAATTTGTCATCAC+TGG 0.428835 6_3:+95118048 None:intergenic
GTGGTTGCTTGCAAGTATCT+TGG 0.429256 6_3:+95116223 None:intergenic
CCTGAATTTGATCTCTATGT+TGG 0.434409 6_3:-95116796 Msa0966590:CDS
GTTCATGCACAACAACAAAC+AGG 0.451581 6_3:-95117982 Msa0966590:intron
CCAACATAGAGATCAAATTC+AGG 0.459738 6_3:+95116796 None:intergenic
GAAATTCTATAATGATGTTA+GGG 0.463240 6_3:+95118094 None:intergenic
TGCTTCAGAACAAGTTGCAT+TGG 0.463718 6_3:-95116740 Msa0966590:CDS
GGTATTATTGATTTAATCAA+AGG 0.466863 6_3:+95116244 None:intergenic
TGCCTTGTGAATAAAGGAAA+AGG 0.471689 6_3:-95116679 Msa0966590:CDS
ATTGGTTCATTTAATGGAAG+TGG 0.474592 6_3:-95116553 Msa0966590:CDS
ATACTTGTACTTTGCAGAAG+TGG 0.478474 6_3:-95116320 Msa0966590:CDS
GCATTCCTAATAACTTCAAA+TGG 0.487694 6_3:+95116418 None:intergenic
GATGGACCTTACATACAAAC+AGG 0.488055 6_3:-95117009 Msa0966590:CDS
ATACCATCTTCTTCAGATGT+TGG 0.490806 6_3:+95116073 None:intergenic
TTATAAATAGAACTATCAAC+TGG 0.494267 6_3:+95116625 None:intergenic
ATCACTGGACCAAGAATAAG+AGG 0.495960 6_3:+95118063 None:intergenic
TGCATTGGAAATAATTAGCA+TGG 0.513790 6_3:-95116725 Msa0966590:CDS
ATCTCCACTGCATTAAGTAT+AGG 0.526223 6_3:+95116124 None:intergenic
TGTGTTTAATTCGAAGTCGT+TGG 0.533736 6_3:-95116200 Msa0966590:CDS
TTCCTAATAACTTCAAATGG+TGG 0.535065 6_3:+95116421 None:intergenic
TACCGCTGAATTCCTCGTCA+TGG 0.547459 6_3:-95116495 Msa0966590:CDS
AAAATAAAATACGTCACAGA+TGG 0.549242 6_3:-95117027 Msa0966590:CDS
CTTCCAACATCTGAAGAAGA+TGG 0.554676 6_3:-95116076 Msa0966590:CDS
TCCCTAAAATAACAAAAGGT+AGG 0.566808 6_3:-95118171 None:intergenic
GAATTCAACGTATCTTGGAA+TGG 0.578329 6_3:-95116271 Msa0966590:CDS
TCCACTGCATTAAGTATAGG+TGG 0.589660 6_3:+95116127 None:intergenic
TCCACCTATACTTAATGCAG+TGG 0.595122 6_3:-95116128 Msa0966590:CDS
TTCTTGTATGGAAACTACGA+CGG 0.615231 6_3:-95116832 Msa0966590:CDS
GCTTATAGATTTCCATGACG+AGG 0.639249 6_3:+95116483 None:intergenic
CATCATTATAGAATTTCACA+AGG 0.648575 6_3:-95118088 Msa0966590:CDS
TTCCATGACGAGGAATTCAG+CGG 0.651129 6_3:+95116493 None:intergenic
AAACTTCTGAGATCTGAGAG+TGG 0.652061 6_3:+95116928 None:intergenic
TAACAGTTCCGGTTTCCACG+AGG 0.660287 6_3:+95116904 None:intergenic
CGTTGGTCGCAAATGAACAT+CGG 0.680315 6_3:-95116183 Msa0966590:CDS
TTAGGAATGCAGCTACACCA+AGG 0.727062 6_3:-95116405 Msa0966590:CDS
CGACTTCGAATTAAACACAG+TGG 0.743612 6_3:+95116204 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTTTTAAAACAACTTA+TGG + chr6_3:95116825-95116844 None:intergenic 10.0%
!!! TAAATTTTTAAAACAACTTA+TGG + chr6_3:95116825-95116844 None:intergenic 10.0%
!!! ATATTTTTAAGACAAAATCA+TGG - chr6_3:95116330-95116349 Msa0966590:CDS 15.0%
!! ACCTTATTAATTATAGTTAA+TGG - chr6_3:95116537-95116556 Msa0966590:CDS 15.0%
!! TCCATTAACTATAATTAATA+AGG + chr6_3:95116541-95116560 None:intergenic 15.0%
!! TTATTGAAATGCAATAAATA+AGG - chr6_3:95116573-95116592 Msa0966590:CDS 15.0%
!! TATTGAAATGCAATAAATAA+GGG - chr6_3:95116574-95116593 Msa0966590:CDS 15.0%
!!! TCATTTTTCAAAATCATTAT+TGG - chr6_3:95116981-95117000 Msa0966590:CDS 15.0%
!! TATACATTGAATTTCAAATT+TGG + chr6_3:95117873-95117892 None:intergenic 15.0%
!!! ATATTTTTAAGACAAAATCA+TGG - chr6_3:95116330-95116349 Msa0966590:CDS 15.0%
!! ACCTTATTAATTATAGTTAA+TGG - chr6_3:95116537-95116556 Msa0966590:CDS 15.0%
!! TCCATTAACTATAATTAATA+AGG + chr6_3:95116541-95116560 None:intergenic 15.0%
!! TTATTGAAATGCAATAAATA+AGG - chr6_3:95116573-95116592 Msa0966590:CDS 15.0%
!! TATTGAAATGCAATAAATAA+GGG - chr6_3:95116574-95116593 Msa0966590:CDS 15.0%
!!! TCATTTTTCAAAATCATTAT+TGG - chr6_3:95116981-95117000 Msa0966590:CDS 15.0%
!! TATACATTGAATTTCAAATT+TGG + chr6_3:95117873-95117892 None:intergenic 15.0%
!! GAAATTCTATAATGATGTTA+GGG + chr6_3:95116119-95116138 None:intergenic 20.0%
!! TGAAATTCTATAATGATGTT+AGG + chr6_3:95116120-95116139 None:intergenic 20.0%
!!! CTATTTTTTAAATTACGATG+AGG + chr6_3:95116429-95116448 None:intergenic 20.0%
!!! AATAAATAAGGGTATGTTAA+TGG - chr6_3:95116585-95116604 Msa0966590:CDS 20.0%
!! GTTGTATCTGTATTATAAAA+GGG - chr6_3:95116623-95116642 Msa0966590:CDS 20.0%
!!! AATTTGAGACAAAGAAAAAT+AGG - chr6_3:95116652-95116671 Msa0966590:CDS 20.0%
!!! TTTTCAAAATCATTATTGGT+CGG - chr6_3:95116985-95117004 Msa0966590:CDS 20.0%
!! TTATAAATAGAACTATCAAC+TGG + chr6_3:95117588-95117607 None:intergenic 20.0%
!! TCTATTTATAAAACTGAGTT+TGG - chr6_3:95117597-95117616 Msa0966590:intron 20.0%
!!! ATTGTTACTTTTCAAAAGAT+GGG - chr6_3:95117632-95117651 Msa0966590:intron 20.0%
!!! ATGATAATTTGGAATTTTCT+TGG - chr6_3:95117835-95117854 Msa0966590:intron 20.0%
!!! GGTATTATTGATTTAATCAA+AGG + chr6_3:95117969-95117988 None:intergenic 20.0%
!! GAAATTCTATAATGATGTTA+GGG + chr6_3:95116119-95116138 None:intergenic 20.0%
!! TGAAATTCTATAATGATGTT+AGG + chr6_3:95116120-95116139 None:intergenic 20.0%
!!! CTATTTTTTAAATTACGATG+AGG + chr6_3:95116429-95116448 None:intergenic 20.0%
!!! AATAAATAAGGGTATGTTAA+TGG - chr6_3:95116585-95116604 Msa0966590:CDS 20.0%
!! GTTGTATCTGTATTATAAAA+GGG - chr6_3:95116623-95116642 Msa0966590:CDS 20.0%
!!! AATTTGAGACAAAGAAAAAT+AGG - chr6_3:95116652-95116671 Msa0966590:CDS 20.0%
!!! TTTTCAAAATCATTATTGGT+CGG - chr6_3:95116985-95117004 Msa0966590:CDS 20.0%
!! TTATAAATAGAACTATCAAC+TGG + chr6_3:95117588-95117607 None:intergenic 20.0%
!! TCTATTTATAAAACTGAGTT+TGG - chr6_3:95117597-95117616 Msa0966590:intron 20.0%
!!! ATTGTTACTTTTCAAAAGAT+GGG - chr6_3:95117632-95117651 Msa0966590:intron 20.0%
!!! ATGATAATTTGGAATTTTCT+TGG - chr6_3:95117835-95117854 Msa0966590:intron 20.0%
!!! GGTATTATTGATTTAATCAA+AGG + chr6_3:95117969-95117988 None:intergenic 20.0%
!!! AGTTGGAAAGAATTTTGTTT+TGG + chr6_3:95116074-95116093 None:intergenic 25.0%
! CATCATTATAGAATTTCACA+AGG - chr6_3:95116122-95116141 Msa0966590:CDS 25.0%
! CAAGATTCCATGATATTAAA+CGG + chr6_3:95116461-95116480 None:intergenic 25.0%
! CGTTGTATCTGTATTATAAA+AGG - chr6_3:95116622-95116641 Msa0966590:CDS 25.0%
! AGAGAACATCTATTATAAGA+TGG - chr6_3:95116677-95116696 Msa0966590:CDS 25.0%
! AACATCTATTATAAGATGGA+GGG - chr6_3:95116681-95116700 Msa0966590:CDS 25.0%
!!! GGAGTAATTTTTTAGTATCA+TGG - chr6_3:95116702-95116721 Msa0966590:CDS 25.0%
!! TTCTTATCTCAGTTTTACTT+AGG - chr6_3:95116735-95116754 Msa0966590:CDS 25.0%
!! TTTTACTTAGGATACTCTTT+TGG - chr6_3:95116747-95116766 Msa0966590:CDS 25.0%
!! TTTACTTAGGATACTCTTTT+GGG - chr6_3:95116748-95116767 Msa0966590:CDS 25.0%
! ATCAATCTCATAAATTTCTC+TGG - chr6_3:95116788-95116807 Msa0966590:CDS 25.0%
! TCAATCTCATAAATTTCTCT+GGG - chr6_3:95116789-95116808 Msa0966590:CDS 25.0%
!! TCTAATTTGTCTTTCTATTC+AGG - chr6_3:95117102-95117121 Msa0966590:intron 25.0%
! AAAATAAAATACGTCACAGA+TGG - chr6_3:95117183-95117202 Msa0966590:intron 25.0%
! TTAATTCCTGTTTGTATGTA+AGG + chr6_3:95117210-95117229 None:intergenic 25.0%
!!! ATGGTAGATTAGGATTTTTT+GGG + chr6_3:95117260-95117279 None:intergenic 25.0%
!!! TATGGTAGATTAGGATTTTT+TGG + chr6_3:95117261-95117280 None:intergenic 25.0%
!!! CATTGTTACTTTTCAAAAGA+TGG - chr6_3:95117631-95117650 Msa0966590:intron 25.0%
! AAATTATCATTCTCATTCCT+TGG + chr6_3:95117825-95117844 None:intergenic 25.0%
! AAGGAATGAGAATGATAATT+TGG - chr6_3:95117824-95117843 Msa0966590:intron 25.0%
!!! AGTTGGAAAGAATTTTGTTT+TGG + chr6_3:95116074-95116093 None:intergenic 25.0%
! CATCATTATAGAATTTCACA+AGG - chr6_3:95116122-95116141 Msa0966590:CDS 25.0%
! CAAGATTCCATGATATTAAA+CGG + chr6_3:95116461-95116480 None:intergenic 25.0%
! CGTTGTATCTGTATTATAAA+AGG - chr6_3:95116622-95116641 Msa0966590:CDS 25.0%
! AGAGAACATCTATTATAAGA+TGG - chr6_3:95116677-95116696 Msa0966590:CDS 25.0%
! AACATCTATTATAAGATGGA+GGG - chr6_3:95116681-95116700 Msa0966590:CDS 25.0%
!!! GGAGTAATTTTTTAGTATCA+TGG - chr6_3:95116702-95116721 Msa0966590:CDS 25.0%
!! TTCTTATCTCAGTTTTACTT+AGG - chr6_3:95116735-95116754 Msa0966590:CDS 25.0%
!! TTTTACTTAGGATACTCTTT+TGG - chr6_3:95116747-95116766 Msa0966590:CDS 25.0%
!! TTTACTTAGGATACTCTTTT+GGG - chr6_3:95116748-95116767 Msa0966590:CDS 25.0%
! ATCAATCTCATAAATTTCTC+TGG - chr6_3:95116788-95116807 Msa0966590:CDS 25.0%
! TCAATCTCATAAATTTCTCT+GGG - chr6_3:95116789-95116808 Msa0966590:CDS 25.0%
!! TCTAATTTGTCTTTCTATTC+AGG - chr6_3:95117102-95117121 Msa0966590:intron 25.0%
! AAAATAAAATACGTCACAGA+TGG - chr6_3:95117183-95117202 Msa0966590:intron 25.0%
! TTAATTCCTGTTTGTATGTA+AGG + chr6_3:95117210-95117229 None:intergenic 25.0%
!!! ATGGTAGATTAGGATTTTTT+GGG + chr6_3:95117260-95117279 None:intergenic 25.0%
!!! TATGGTAGATTAGGATTTTT+TGG + chr6_3:95117261-95117280 None:intergenic 25.0%
!!! CATTGTTACTTTTCAAAAGA+TGG - chr6_3:95117631-95117650 Msa0966590:intron 25.0%
! AAATTATCATTCTCATTCCT+TGG + chr6_3:95117825-95117844 None:intergenic 25.0%
! AAGGAATGAGAATGATAATT+TGG - chr6_3:95117824-95117843 Msa0966590:intron 25.0%
! ACAACTTTTGATATGCAAGT+TGG + chr6_3:95116091-95116110 None:intergenic 30.0%
!!! ACGATGTCAACGAATTTTTT+CGG + chr6_3:95116395-95116414 None:intergenic 30.0%
ATATGCACCGTTTAATATCA+TGG - chr6_3:95116451-95116470 Msa0966590:CDS 30.0%
GAACATCTATTATAAGATGG+AGG - chr6_3:95116680-95116699 Msa0966590:CDS 30.0%
! ACACTTTCAATTTGAAGTGT+CGG + chr6_3:95116881-95116900 None:intergenic 30.0%
TTGAATGTAATCACATGTGT+CGG + chr6_3:95116955-95116974 None:intergenic 30.0%
! TCAGTGTACTCAAAATTTTC+TGG + chr6_3:95117153-95117172 None:intergenic 30.0%
!! AAATTTTGAGTACACTGATG+AGG - chr6_3:95117155-95117174 Msa0966590:intron 30.0%
ATAAGAGCTTCTTTCTTGTA+TGG - chr6_3:95117366-95117385 Msa0966590:intron 30.0%
TCTATGTTGGTGTAAATTTC+TGG - chr6_3:95117427-95117446 Msa0966590:intron 30.0%
TGCATTGGAAATAATTAGCA+TGG - chr6_3:95117485-95117504 Msa0966590:intron 30.0%
AATGTTTGCCTTGTGAATAA+AGG - chr6_3:95117525-95117544 Msa0966590:intron 30.0%
! TTCCTTTTCCTTTATTCACA+AGG + chr6_3:95117536-95117555 None:intergenic 30.0%
! AATTCCTTTTATCTCAGCAT+TGG - chr6_3:95117554-95117573 Msa0966590:intron 30.0%
! ATTGGTTCATTTAATGGAAG+TGG - chr6_3:95117657-95117676 Msa0966590:intron 30.0%
ACGATGTTTACGATAGAATT+TGG - chr6_3:95117691-95117710 Msa0966590:intron 30.0%
AAAATCGATGTTAGTGAAGA+TGG - chr6_3:95117759-95117778 Msa0966590:intron 30.0%
! AACCACCATTTGAAGTTATT+AGG - chr6_3:95117787-95117806 Msa0966590:intron 30.0%
TTCCTAATAACTTCAAATGG+TGG + chr6_3:95117792-95117811 None:intergenic 30.0%
GCATTCCTAATAACTTCAAA+TGG + chr6_3:95117795-95117814 None:intergenic 30.0%
! ACAACTTTTGATATGCAAGT+TGG + chr6_3:95116091-95116110 None:intergenic 30.0%
!!! ACGATGTCAACGAATTTTTT+CGG + chr6_3:95116395-95116414 None:intergenic 30.0%
ATATGCACCGTTTAATATCA+TGG - chr6_3:95116451-95116470 Msa0966590:CDS 30.0%
GAACATCTATTATAAGATGG+AGG - chr6_3:95116680-95116699 Msa0966590:CDS 30.0%
! ACACTTTCAATTTGAAGTGT+CGG + chr6_3:95116881-95116900 None:intergenic 30.0%
TTGAATGTAATCACATGTGT+CGG + chr6_3:95116955-95116974 None:intergenic 30.0%
! TCAGTGTACTCAAAATTTTC+TGG + chr6_3:95117153-95117172 None:intergenic 30.0%
!! AAATTTTGAGTACACTGATG+AGG - chr6_3:95117155-95117174 Msa0966590:intron 30.0%
ATAAGAGCTTCTTTCTTGTA+TGG - chr6_3:95117366-95117385 Msa0966590:intron 30.0%
TCTATGTTGGTGTAAATTTC+TGG - chr6_3:95117427-95117446 Msa0966590:intron 30.0%
TGCATTGGAAATAATTAGCA+TGG - chr6_3:95117485-95117504 Msa0966590:intron 30.0%
AATGTTTGCCTTGTGAATAA+AGG - chr6_3:95117525-95117544 Msa0966590:intron 30.0%
! TTCCTTTTCCTTTATTCACA+AGG + chr6_3:95117536-95117555 None:intergenic 30.0%
! AATTCCTTTTATCTCAGCAT+TGG - chr6_3:95117554-95117573 Msa0966590:intron 30.0%
! ATTGGTTCATTTAATGGAAG+TGG - chr6_3:95117657-95117676 Msa0966590:intron 30.0%
ACGATGTTTACGATAGAATT+TGG - chr6_3:95117691-95117710 Msa0966590:intron 30.0%
AAAATCGATGTTAGTGAAGA+TGG - chr6_3:95117759-95117778 Msa0966590:intron 30.0%
! AACCACCATTTGAAGTTATT+AGG - chr6_3:95117787-95117806 Msa0966590:intron 30.0%
TTCCTAATAACTTCAAATGG+TGG + chr6_3:95117792-95117811 None:intergenic 30.0%
GCATTCCTAATAACTTCAAA+TGG + chr6_3:95117795-95117814 None:intergenic 30.0%
CCAATTGAATTTGTCATCAC+TGG + chr6_3:95116165-95116184 None:intergenic 35.0%
CCAGTGATGACAAATTCAAT+TGG - chr6_3:95116162-95116181 Msa0966590:CDS 35.0%
!!! TCATTCTGCTTCTCGTTTTT+TGG - chr6_3:95116187-95116206 Msa0966590:CDS 35.0%
GATTCTCTTGTAGAAGTTGA+TGG + chr6_3:95116264-95116283 None:intergenic 35.0%
!! TCTGATTTTGGCAAAAGTCA+CGG - chr6_3:95116359-95116378 Msa0966590:CDS 35.0%
TACTCTAATCGTCTCACAAT+AGG - chr6_3:95116488-95116507 Msa0966590:CDS 35.0%
CGATTTGTCAATGTCATGTT+TGG - chr6_3:95117014-95117033 Msa0966590:CDS 35.0%
! CACATAAAAGTATGAAGCAC+CGG + chr6_3:95117054-95117073 None:intergenic 35.0%
!! TTCATTAGCATTGATTGTGG+TGG - chr6_3:95117126-95117145 Msa0966590:intron 35.0%
CAATTAATCGGTAACAGTTC+CGG + chr6_3:95117320-95117339 None:intergenic 35.0%
! AACTGTTACCGATTAATTGC+CGG - chr6_3:95117321-95117340 Msa0966590:intron 35.0%
! CTTTTGTTCCGGCAATTAAT+CGG + chr6_3:95117332-95117351 None:intergenic 35.0%
! ATGTAAACTGCCTTTTGTTC+CGG + chr6_3:95117343-95117362 None:intergenic 35.0%
TTCTTGTATGGAAACTACGA+CGG - chr6_3:95117378-95117397 Msa0966590:intron 35.0%
CCAACATAGAGATCAAATTC+AGG + chr6_3:95117417-95117436 None:intergenic 35.0%
CCTGAATTTGATCTCTATGT+TGG - chr6_3:95117414-95117433 Msa0966590:intron 35.0%
TGCCTTGTGAATAAAGGAAA+AGG - chr6_3:95117531-95117550 Msa0966590:intron 35.0%
AGTTCCAATGCTGAGATAAA+AGG + chr6_3:95117561-95117580 None:intergenic 35.0%
! CTTTTCAAAAGATGGGACAT+TGG - chr6_3:95117639-95117658 Msa0966590:intron 35.0%
!! TGGGACATTGGTTCATTTAA+TGG - chr6_3:95117651-95117670 Msa0966590:intron 35.0%
ATACTTGTACTTTGCAGAAG+TGG - chr6_3:95117890-95117909 Msa0966590:intron 35.0%
TGAGAGAATTCAACGTATCT+TGG - chr6_3:95117934-95117953 Msa0966590:intron 35.0%
GAATTCAACGTATCTTGGAA+TGG - chr6_3:95117939-95117958 Msa0966590:intron 35.0%
TGTGTTTAATTCGAAGTCGT+TGG - chr6_3:95118010-95118029 Msa0966590:CDS 35.0%
ATCTCCACTGCATTAAGTAT+AGG + chr6_3:95118089-95118108 None:intergenic 35.0%
ATACCATCTTCTTCAGATGT+TGG + chr6_3:95118140-95118159 None:intergenic 35.0%
CCAATTGAATTTGTCATCAC+TGG + chr6_3:95116165-95116184 None:intergenic 35.0%
CCAGTGATGACAAATTCAAT+TGG - chr6_3:95116162-95116181 Msa0966590:CDS 35.0%
!!! TCATTCTGCTTCTCGTTTTT+TGG - chr6_3:95116187-95116206 Msa0966590:CDS 35.0%
GATTCTCTTGTAGAAGTTGA+TGG + chr6_3:95116264-95116283 None:intergenic 35.0%
!! TCTGATTTTGGCAAAAGTCA+CGG - chr6_3:95116359-95116378 Msa0966590:CDS 35.0%
TACTCTAATCGTCTCACAAT+AGG - chr6_3:95116488-95116507 Msa0966590:CDS 35.0%
CGATTTGTCAATGTCATGTT+TGG - chr6_3:95117014-95117033 Msa0966590:CDS 35.0%
! CACATAAAAGTATGAAGCAC+CGG + chr6_3:95117054-95117073 None:intergenic 35.0%
!! TTCATTAGCATTGATTGTGG+TGG - chr6_3:95117126-95117145 Msa0966590:intron 35.0%
CAATTAATCGGTAACAGTTC+CGG + chr6_3:95117320-95117339 None:intergenic 35.0%
! AACTGTTACCGATTAATTGC+CGG - chr6_3:95117321-95117340 Msa0966590:intron 35.0%
! CTTTTGTTCCGGCAATTAAT+CGG + chr6_3:95117332-95117351 None:intergenic 35.0%
! ATGTAAACTGCCTTTTGTTC+CGG + chr6_3:95117343-95117362 None:intergenic 35.0%
TTCTTGTATGGAAACTACGA+CGG - chr6_3:95117378-95117397 Msa0966590:intron 35.0%
CCAACATAGAGATCAAATTC+AGG + chr6_3:95117417-95117436 None:intergenic 35.0%
CCTGAATTTGATCTCTATGT+TGG - chr6_3:95117414-95117433 Msa0966590:intron 35.0%
TGCCTTGTGAATAAAGGAAA+AGG - chr6_3:95117531-95117550 Msa0966590:intron 35.0%
AGTTCCAATGCTGAGATAAA+AGG + chr6_3:95117561-95117580 None:intergenic 35.0%
! CTTTTCAAAAGATGGGACAT+TGG - chr6_3:95117639-95117658 Msa0966590:intron 35.0%
!! TGGGACATTGGTTCATTTAA+TGG - chr6_3:95117651-95117670 Msa0966590:intron 35.0%
ATACTTGTACTTTGCAGAAG+TGG - chr6_3:95117890-95117909 Msa0966590:intron 35.0%
TGAGAGAATTCAACGTATCT+TGG - chr6_3:95117934-95117953 Msa0966590:intron 35.0%
GAATTCAACGTATCTTGGAA+TGG - chr6_3:95117939-95117958 Msa0966590:intron 35.0%
TGTGTTTAATTCGAAGTCGT+TGG - chr6_3:95118010-95118029 Msa0966590:CDS 35.0%
ATCTCCACTGCATTAAGTAT+AGG + chr6_3:95118089-95118108 None:intergenic 35.0%
ATACCATCTTCTTCAGATGT+TGG + chr6_3:95118140-95118159 None:intergenic 35.0%
ATCACTGGACCAAGAATAAG+AGG + chr6_3:95116150-95116169 None:intergenic 40.0%
!!! CTGCTTCTCGTTTTTTGGTT+TGG - chr6_3:95116192-95116211 Msa0966590:CDS 40.0%
GTTCATGCACAACAACAAAC+AGG - chr6_3:95116228-95116247 Msa0966590:CDS 40.0%
! TCATGGAGTCACTCTGATTT+TGG - chr6_3:95116347-95116366 Msa0966590:CDS 40.0%
!! TTTGGTGTCTATGTTTGTGC+CGG - chr6_3:95117032-95117051 Msa0966590:CDS 40.0%
! CGGTGCTTCATACTTTTATG+TGG - chr6_3:95117052-95117071 Msa0966590:CDS 40.0%
!! GGCTTCATTAGCATTGATTG+TGG - chr6_3:95117123-95117142 Msa0966590:intron 40.0%
GATGGACCTTACATACAAAC+AGG - chr6_3:95117201-95117220 Msa0966590:intron 40.0%
GAGAGTGGATATGGTAGATT+AGG + chr6_3:95117270-95117289 None:intergenic 40.0%
!! AAACTTCTGAGATCTGAGAG+TGG + chr6_3:95117285-95117304 None:intergenic 40.0%
CGATTAATTGCCGGAACAAA+AGG - chr6_3:95117330-95117349 Msa0966590:intron 40.0%
TGCTTCAGAACAAGTTGCAT+TGG - chr6_3:95117470-95117489 Msa0966590:intron 40.0%
GCTTATAGATTTCCATGACG+AGG + chr6_3:95117730-95117749 None:intergenic 40.0%
CGACTTCGAATTAAACACAG+TGG + chr6_3:95118009-95118028 None:intergenic 40.0%
!! AGGTGGAAGTGTTGAATCTT+CGG + chr6_3:95118069-95118088 None:intergenic 40.0%
TCCACCTATACTTAATGCAG+TGG - chr6_3:95118082-95118101 Msa0966590:CDS 40.0%
TCCACTGCATTAAGTATAGG+TGG + chr6_3:95118086-95118105 None:intergenic 40.0%
CTTCCAACATCTGAAGAAGA+TGG - chr6_3:95118134-95118153 Msa0966590:CDS 40.0%
ATCACTGGACCAAGAATAAG+AGG + chr6_3:95116150-95116169 None:intergenic 40.0%
!!! CTGCTTCTCGTTTTTTGGTT+TGG - chr6_3:95116192-95116211 Msa0966590:CDS 40.0%
GTTCATGCACAACAACAAAC+AGG - chr6_3:95116228-95116247 Msa0966590:CDS 40.0%
! TCATGGAGTCACTCTGATTT+TGG - chr6_3:95116347-95116366 Msa0966590:CDS 40.0%
!! TTTGGTGTCTATGTTTGTGC+CGG - chr6_3:95117032-95117051 Msa0966590:CDS 40.0%
! CGGTGCTTCATACTTTTATG+TGG - chr6_3:95117052-95117071 Msa0966590:CDS 40.0%
!! GGCTTCATTAGCATTGATTG+TGG - chr6_3:95117123-95117142 Msa0966590:intron 40.0%
GATGGACCTTACATACAAAC+AGG - chr6_3:95117201-95117220 Msa0966590:intron 40.0%
GAGAGTGGATATGGTAGATT+AGG + chr6_3:95117270-95117289 None:intergenic 40.0%
!! AAACTTCTGAGATCTGAGAG+TGG + chr6_3:95117285-95117304 None:intergenic 40.0%
CGATTAATTGCCGGAACAAA+AGG - chr6_3:95117330-95117349 Msa0966590:intron 40.0%
TGCTTCAGAACAAGTTGCAT+TGG - chr6_3:95117470-95117489 Msa0966590:intron 40.0%
GCTTATAGATTTCCATGACG+AGG + chr6_3:95117730-95117749 None:intergenic 40.0%
CGACTTCGAATTAAACACAG+TGG + chr6_3:95118009-95118028 None:intergenic 40.0%
!! AGGTGGAAGTGTTGAATCTT+CGG + chr6_3:95118069-95118088 None:intergenic 40.0%
TCCACCTATACTTAATGCAG+TGG - chr6_3:95118082-95118101 Msa0966590:CDS 40.0%
TCCACTGCATTAAGTATAGG+TGG + chr6_3:95118086-95118105 None:intergenic 40.0%
CTTCCAACATCTGAAGAAGA+TGG - chr6_3:95118134-95118153 Msa0966590:CDS 40.0%
CACAAGGCTCCTCTTATTCT+TGG - chr6_3:95116138-95116157 Msa0966590:CDS 45.0%
CTGAGATCTGAGAGTGGATA+TGG + chr6_3:95117279-95117298 None:intergenic 45.0%
! GATCTCAGAAGTTTTCCTCG+TGG - chr6_3:95117291-95117310 Msa0966590:intron 45.0%
! GAAGTTTTCCTCGTGGAAAC+CGG - chr6_3:95117298-95117317 Msa0966590:intron 45.0%
TTCCATGACGAGGAATTCAG+CGG + chr6_3:95117720-95117739 None:intergenic 45.0%
TTAGGAATGCAGCTACACCA+AGG - chr6_3:95117805-95117824 Msa0966590:intron 45.0%
GTGGTTGCTTGCAAGTATCT+TGG + chr6_3:95117990-95118009 None:intergenic 45.0%
CGTTGGTCGCAAATGAACAT+CGG - chr6_3:95118027-95118046 Msa0966590:CDS 45.0%
CACAAGGCTCCTCTTATTCT+TGG - chr6_3:95116138-95116157 Msa0966590:CDS 45.0%
CTGAGATCTGAGAGTGGATA+TGG + chr6_3:95117279-95117298 None:intergenic 45.0%
! GATCTCAGAAGTTTTCCTCG+TGG - chr6_3:95117291-95117310 Msa0966590:intron 45.0%
! GAAGTTTTCCTCGTGGAAAC+CGG - chr6_3:95117298-95117317 Msa0966590:intron 45.0%
TTCCATGACGAGGAATTCAG+CGG + chr6_3:95117720-95117739 None:intergenic 45.0%
TTAGGAATGCAGCTACACCA+AGG - chr6_3:95117805-95117824 Msa0966590:intron 45.0%
GTGGTTGCTTGCAAGTATCT+TGG + chr6_3:95117990-95118009 None:intergenic 45.0%
CGTTGGTCGCAAATGAACAT+CGG - chr6_3:95118027-95118046 Msa0966590:CDS 45.0%
!! GGGTGCTGTTAAACACGTGT+TGG + chr6_3:95116913-95116932 None:intergenic 50.0%
GTGTCATGTTGGAGTCATGC+GGG + chr6_3:95116933-95116952 None:intergenic 50.0%
! GGTGTCATGTTGGAGTCATG+CGG + chr6_3:95116934-95116953 None:intergenic 50.0%
!! CACATGTGTCGGTGTCATGT+TGG + chr6_3:95116944-95116963 None:intergenic 50.0%
TAACAGTTCCGGTTTCCACG+AGG + chr6_3:95117309-95117328 None:intergenic 50.0%
TACCGCTGAATTCCTCGTCA+TGG - chr6_3:95117715-95117734 Msa0966590:intron 50.0%
!! GGGTGCTGTTAAACACGTGT+TGG + chr6_3:95116913-95116932 None:intergenic 50.0%
GTGTCATGTTGGAGTCATGC+GGG + chr6_3:95116933-95116952 None:intergenic 50.0%
! GGTGTCATGTTGGAGTCATG+CGG + chr6_3:95116934-95116953 None:intergenic 50.0%
!! CACATGTGTCGGTGTCATGT+TGG + chr6_3:95116944-95116963 None:intergenic 50.0%
TAACAGTTCCGGTTTCCACG+AGG + chr6_3:95117309-95117328 None:intergenic 50.0%
TACCGCTGAATTCCTCGTCA+TGG - chr6_3:95117715-95117734 Msa0966590:intron 50.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 95116054 95118178 95116054 ID=Msa0966590;Name=Msa0966590
chr6_3 mRNA 95116054 95118178 95116054 ID=Msa0966590-mRNA-1;Parent=Msa0966590;Name=Msa0966590-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0.5|1|1|1|2|0|406
chr6_3 exon 95116054 95117078 95116054 ID=Msa0966590-mRNA-1:exon:17643;Parent=Msa0966590-mRNA-1
chr6_3 exon 95117983 95118178 95117983 ID=Msa0966590-mRNA-1:exon:17642;Parent=Msa0966590-mRNA-1
chr6_3 CDS 95117983 95118178 95117983 ID=Msa0966590-mRNA-1:cds;Parent=Msa0966590-mRNA-1
chr6_3 CDS 95116054 95117078 95116054 ID=Msa0966590-mRNA-1:cds;Parent=Msa0966590-mRNA-1
Gene Sequence

>Msa0966590

AAGGTAGGTTGTTTCTTCCAAAACAAAATTCTTTCCAACTTGCATATCAAAAGTTGTTTCTTCCCTAACATCATTATAGAATTTCACAAGGCTCCTCTTATTCTTGGTCCAGTGATGACAAATTCAATTGGATTCATTCTGCTTCTCGTTTTTTGGTTTGGTGTTACAGTTTTAGTTCATGCACAACAACAAACAGAAAATTTTGAGTACACTGATGAGGACACTAAAATAAAATACGTCACAGATGGACCTTACATACAAACAGGAATTAACAGAAACATTTCTTCTGACTATGCATACCCAAAAAATCCTAATCTACCATATCCACTCTCAGATCTCAGAAGTTTTCCTCGTGGAAACCGGAACTGTTACCGATTAATTGCCGGAACAAAAGGCAGTTTACATTTAATAAGAGCTTCTTTCTTGTATGGAAACTACGACGGCGAAAACAAATTGCCTGAATTTGATCTCTATGTTGGTGTAAATTTCTGGTCATCAGTGAAATTTAAGAATGCTTCAGAACAAGTTGCATTGGAAATAATTAGCATGGCAACATCAGAAGAAACAAATGTTTGCCTTGTGAATAAAGGAAAAGGAATTCCTTTTATCTCAGCATTGGAACTTCGACCAGTTGATAGTTCTATTTATAAAACTGAGTTTGGTGATTCTGCTTCATTGTTACTTTTCAAAAGATGGGACATTGGTTCATTTAATGGAAGTGGTAGATATCAAGACGATGTTTACGATAGAATTTGGTTACCGCTGAATTCCTCGTCATGGAAATCTATAAGCACTTCTTTGAAAATCGATGTTAGTGAAGATGGATATAAACCACCATTTGAAGTTATTAGGAATGCAGCTACACCAAGGAATGAGAATGATAATTTGGAATTTTCTTGGATTTCAGATGATCCAAATTTGAAATTCAATGTATACTTGTACTTTGCAGAAGTGGAGAAACTTAACAAAACTCAATTGAGAGAATTCAACGTATCTTGGAATGGTTCTCCTTTGATTAAATCAATAATACCAAGATACTTGCAAGCAACCACTGTGTTTAATTCGAAGTCGTTGGTCGCAAATGAACATCGGATTTCAATACAAAAAACCGAAGATTCAACACTTCCACCTATACTTAATGCAGTGGAGATTTATGTAGTAAGACAACTTGATGCACTTCCAACATCTGAAGAAGATGGTATGACATGTTGTAACATCTAG

Protein sequence

>Msa0966590

KVGCFFQNKILSNLHIKSCFFPNIIIEFHKAPLILGPVMTNSIGFILLLVFWFGVTVLVHAQQQTENFEYTDEDTKIKYVTDGPYIQTGINRNISSDYAYPKNPNLPYPLSDLRSFPRGNRNCYRLIAGTKGSLHLIRASFLYGNYDGENKLPEFDLYVGVNFWSSVKFKNASEQVALEIISMATSEETNVCLVNKGKGIPFISALELRPVDSSIYKTEFGDSASLLLFKRWDIGSFNGSGRYQDDVYDRIWLPLNSSSWKSISTSLKIDVSEDGYKPPFEVIRNAATPRNENDNLEFSWISDDPNLKFNVYLYFAEVEKLNKTQLREFNVSWNGSPLIKSIIPRYLQATTVFNSKSLVANEHRISIQKTEDSTLPPILNAVEIYVVRQLDALPTSEEDGMTCCNI*