AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0619030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619030 MtrunA17_Chr8g0383721 98.050 359 7 0 1 359 1 359 0.0 726
Msa0619030 MtrunA17_Chr5g0411821 66.106 357 120 1 1 356 1 357 6.62e-174 489
Msa0619030 MtrunA17_Chr4g0064291 65.266 357 123 1 1 356 1 357 1.36e-171 482
Msa0619030 MtrunA17_Chr5g0411801 66.017 359 121 1 1 358 33 391 7.82e-171 481
Msa0619030 MtrunA17_Chr5g0411841 64.426 357 126 1 1 356 1 357 5.94e-168 473
Msa0619030 MtrunA17_Chr5g0411931 63.510 359 130 1 1 358 1 359 3.24e-167 471
Msa0619030 MtrunA17_Chr5g0411901 63.143 350 128 1 8 356 9 358 2.99e-166 468
Msa0619030 MtrunA17_Chr5g0411911 63.897 349 125 1 9 356 11 359 1.05e-164 464
Msa0619030 MtrunA17_Chr5g0411811 63.866 357 128 1 1 356 1 357 2.29e-162 458
Msa0619030 MtrunA17_Chr5g0411881 62.571 350 130 1 8 356 9 358 2.80e-162 458
Msa0619030 MtrunA17_Chr8g0367151 65.181 359 124 1 1 358 1 359 1.15e-161 456
Msa0619030 MtrunA17_Chr5g0411871 59.429 350 141 1 8 356 23 372 1.40e-158 449
Msa0619030 MtrunA17_Chr1g0157021 60.350 343 134 2 15 355 14 356 7.19e-143 409
Msa0619030 MtrunA17_Chr5g0411941 58.757 354 143 2 4 356 6 357 4.21e-140 402
Msa0619030 MtrunA17_Chr5g0411791 63.609 327 118 1 33 358 7 333 4.83e-138 395
Msa0619030 MtrunA17_Chr2g0279791 55.072 345 152 3 14 356 62 405 2.86e-120 353
Msa0619030 MtrunA17_Chr1g0208031 50.292 342 169 1 15 355 13 354 2.33e-116 341
Msa0619030 MtrunA17_Chr2g0279801 52.582 213 88 3 145 356 13 213 1.24e-55 181
Msa0619030 MtrunA17_Chr5g0411851 67.606 71 23 0 1 71 1 71 2.86e-30 112
Msa0619030 MtrunA17_Chr8g0385221 28.622 283 169 11 24 278 67 344 2.41e-24 103
Msa0619030 MtrunA17_Chr5g0411861 61.905 63 24 0 296 358 1 63 9.71e-24 92.8
Msa0619030 MtrunA17_Chr4g0021211 27.566 341 206 13 39 351 61 388 1.59e-17 83.2
Msa0619030 MtrunA17_Chr6g0474141 23.711 291 198 8 15 292 19 298 1.53e-15 77.0
Msa0619030 MtrunA17_Chr7g0262421 25.664 339 211 12 38 341 37 369 8.58e-15 75.1
Msa0619030 MtrunA17_Chr1g0183131 25.074 339 211 12 39 341 36 367 1.15e-13 71.6
Msa0619030 MtrunA17_Chr3g0132351 26.183 317 173 12 39 311 44 343 1.37e-12 68.2
Msa0619030 MtrunA17_Chr3g0118441 25.839 298 186 13 39 306 41 333 1.95e-12 67.8
Msa0619030 MtrunA17_Chr8g0365421 27.083 240 139 7 37 265 103 317 7.66e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0619030 AT4G39330.1 76.536 358 83 1 1 357 1 358 0.0 558
Msa0619030 AT2G21730.1 72.126 348 94 2 12 356 6 353 0.0 517
Msa0619030 AT2G21890.1 72.334 347 94 2 12 356 6 352 0.0 517
Msa0619030 AT4G39330.2 74.751 301 75 1 1 300 1 301 9.69e-162 455
Msa0619030 AT4G37970.1 60.393 356 140 1 4 358 5 360 1.07e-159 452
Msa0619030 AT4G37990.1 66.189 349 117 1 9 356 5 353 4.47e-157 445
Msa0619030 AT4G37980.1 64.756 349 122 1 9 356 5 353 1.83e-155 441
Msa0619030 AT4G37970.4 59.864 294 117 1 4 296 5 298 5.68e-126 364
Msa0619030 AT1G72680.1 52.924 342 159 2 16 356 14 354 1.42e-119 350
Msa0619030 AT4G37980.2 62.414 290 108 1 9 297 5 294 2.38e-119 347
Msa0619030 AT3G19450.1 50.435 345 170 1 12 355 10 354 5.78e-113 333
Msa0619030 AT4G34230.1 50.716 349 171 1 8 355 5 353 3.73e-108 321
Msa0619030 AT4G34230.2 50.430 349 172 1 8 355 5 353 2.79e-107 318
Msa0619030 AT4G37970.3 59.336 241 97 1 4 243 5 245 1.81e-100 298
Msa0619030 AT4G37970.2 59.833 239 95 1 4 241 5 243 4.47e-100 296
Msa0619030 AT5G63620.2 26.027 365 227 14 24 352 69 426 2.19e-25 106
Msa0619030 AT5G63620.1 26.027 365 227 14 24 352 69 426 3.90e-25 105
Msa0619030 AT5G63620.3 29.825 228 132 8 24 228 69 291 4.46e-23 98.6
Msa0619030 AT5G43940.1 26.000 350 217 11 39 353 36 378 3.51e-19 88.2
Msa0619030 AT5G43940.2 25.926 351 218 11 39 354 48 391 3.89e-19 88.2
Msa0619030 AT1G22430.2 26.979 341 205 13 39 341 42 376 1.52e-18 86.7
Msa0619030 AT1G22430.1 26.979 341 205 13 39 341 42 376 1.52e-18 86.7
Msa0619030 AT5G51970.1 26.838 272 173 8 36 292 40 300 7.30e-18 84.3
Msa0619030 AT5G51970.2 26.838 272 173 8 36 292 40 300 7.30e-18 84.3
Msa0619030 AT4G22110.2 26.549 339 205 13 39 339 43 375 9.15e-17 81.3
Msa0619030 AT4G22110.1 26.549 339 205 13 39 339 43 375 9.15e-17 81.3
Msa0619030 AT1G64710.2 24.412 340 215 13 39 341 13 347 6.38e-16 78.6
Msa0619030 AT1G64710.1 24.412 340 215 13 39 341 36 370 7.50e-16 78.6
Msa0619030 AT5G42250.1 23.512 336 219 10 39 339 45 377 2.58e-14 73.9
Msa0619030 AT1G22430.3 27.723 202 120 5 39 218 42 239 2.71e-14 73.2
Msa0619030 AT1G22430.4 27.778 216 129 6 39 232 42 252 3.61e-14 72.8
Msa0619030 AT1G22430.5 27.778 216 129 6 39 232 42 252 3.61e-14 72.8
Msa0619030 AT1G22440.1 25.497 302 183 11 39 306 40 333 1.40e-13 71.6
Msa0619030 AT4G22110.3 27.528 178 104 4 39 195 43 216 7.71e-13 68.6
Msa0619030 AT1G77120.1 21.829 339 226 10 39 343 36 369 3.80e-11 64.3

Find 118 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGTGGGAGTTCGGTTTC+TGG 0.179322 4_2:+70036068 None:intergenic
ATCAAATTCGGTAAAGCATT+TGG 0.245686 4_2:-70033932 Msa0619030:CDS
ACTACTTACCCTGTTGTTCC+TGG 0.250937 4_2:-70035805 Msa0619030:CDS
ACCTATAACTCTCCTTATAA+AGG 0.251163 4_2:-70034160 Msa0619030:CDS
ATGGCCTCAGTTTCCTTGTT+TGG 0.279886 4_2:+70033881 None:intergenic
TCTGTCTTTCCATTAGTTGC+AGG 0.301516 4_2:-70033033 Msa0619030:intron
GTGGCAGGGCTTGGTGGGTT+AGG 0.307365 4_2:-70033965 Msa0619030:CDS
CTAAAAGCGTGTTTGGTCTT+AGG 0.313817 4_2:-70032399 Msa0619030:three_prime_UTR
TGAGAATTGCAATCAAGATT+TGG 0.319987 4_2:-70034209 Msa0619030:CDS
TAGGTTCGTGTCCCTTTATA+AGG 0.354122 4_2:+70034148 None:intergenic
TTGGGAGTGGCAGGGCTTGG+TGG 0.355141 4_2:-70033971 Msa0619030:CDS
ATTGTCGTCTAATTTATTGT+AGG 0.359090 4_2:-70032471 Msa0619030:three_prime_UTR
TTATAGGTAAATACAGGTTT+AGG 0.360036 4_2:+70034175 None:intergenic
CCCTTTATAAGGAGAGTTAT+AGG 0.360288 4_2:+70034159 None:intergenic
GTAGACCAAGCAGTGGCATC+AGG 0.373980 4_2:+70033112 None:intergenic
GATGGTTTACCTGCAACTAA+TGG 0.378875 4_2:+70033024 None:intergenic
TATAGCCCGATGAAGTATTA+TGG 0.379807 4_2:-70034016 Msa0619030:CDS
GCCACTCCCAAATGTTTGCC+TGG 0.380570 4_2:+70033983 None:intergenic
CCTATAACTCTCCTTATAAA+GGG 0.390671 4_2:-70034159 Msa0619030:CDS
GGCAAACATTTGGGAGTGGC+AGG 0.391166 4_2:-70033980 Msa0619030:CDS
ACAAAGCTGATGTGAAATAT+CGG 0.393376 4_2:-70032646 Msa0619030:CDS
CAGACATACCCAGGAACAAC+AGG 0.394883 4_2:+70035796 None:intergenic
CTCCCTTTCATTTCTCTCGA+AGG 0.396574 4_2:-70036004 Msa0619030:intron
ACTGAAGTTGAATGGGAAAC+TGG 0.399835 4_2:-70033091 Msa0619030:CDS
GACTGAACCAGGCAAACATT+TGG 0.404496 4_2:-70033990 Msa0619030:CDS
TCAAATTCGGTAAAGCATTT+GGG 0.405047 4_2:-70033931 Msa0619030:CDS
GTCTAATTTATTGTAGGCTC+AGG 0.408055 4_2:-70032465 Msa0619030:three_prime_UTR
ACTGCAGGACGGAAGCTTAT+CGG 0.411894 4_2:-70032794 Msa0619030:intron
CATTTGGGAGTGGCAGGGCT+TGG 0.412676 4_2:-70033974 Msa0619030:CDS
GGCCATGTTGCAATCAAATT+CGG 0.413822 4_2:-70033944 Msa0619030:CDS
GGAGAGTTATAGGTAAATAC+AGG 0.414003 4_2:+70034169 None:intergenic
CTACTTACCCTGTTGTTCCT+GGG 0.415236 4_2:-70035804 Msa0619030:intron
GTGCTCCACTTCTGTGTGCC+GGG 0.418161 4_2:-70034048 Msa0619030:CDS
GGTGCTCCACTTCTGTGTGC+CGG 0.433744 4_2:-70034049 Msa0619030:CDS
AAAGGCTTTGAGTGGGAGTT+CGG 0.436113 4_2:+70036061 None:intergenic
GAACTCCCACTCAAAGCCTT+TGG 0.438765 4_2:-70036059 Msa0619030:CDS
ACTGAACCAGGCAAACATTT+GGG 0.439930 4_2:-70033989 Msa0619030:CDS
CATTCCCTGATGCCACTGCT+TGG 0.448606 4_2:-70033117 Msa0619030:CDS
CCCACTCAAAGCCTTTGGTT+GGG 0.463270 4_2:-70036054 Msa0619030:CDS
TGGGCTGCTAGAGACACTTC+TGG 0.465043 4_2:-70036035 Msa0619030:CDS
TCCCACTCAAAGCCTTTGGT+TGG 0.470177 4_2:-70036055 Msa0619030:CDS
TGTCTGACTAAAAGCGTGTT+TGG 0.474906 4_2:-70032406 Msa0619030:three_prime_UTR
ACACACTCTCAAGAACGATT+GGG 0.475053 4_2:-70035833 Msa0619030:CDS
AAGTGGAGCACCAGCGTCAA+GGG 0.477411 4_2:+70034060 None:intergenic
CGGTAAAGCATTTGGGCTGA+AGG 0.479081 4_2:-70033924 Msa0619030:CDS
TACACACTCTCAAGAACGAT+TGG 0.482360 4_2:-70035834 Msa0619030:CDS
CTCAGTTTCCTTGTTTGGAG+AGG 0.482678 4_2:+70033886 None:intergenic
GCGTCAAGGGGTAAGTTGTC+AGG 0.483209 4_2:+70034073 None:intergenic
TGGGAGTGGCAGGGCTTGGT+GGG 0.488091 4_2:-70033970 Msa0619030:CDS
TCATACCATAATACTTCATC+GGG 0.495385 4_2:+70034011 None:intergenic
GAGAGCTCAAGGGGCTTGCT+AGG 0.495481 4_2:+70033054 None:intergenic
CTTGGTCTACTGAAGTTGAA+TGG 0.496517 4_2:-70033099 Msa0619030:CDS
GTCATACCATAATACTTCAT+CGG 0.503227 4_2:+70034010 None:intergenic
GTTGGCGTTGTGACAAAAGT+TGG 0.504641 4_2:-70034304 Msa0619030:CDS
ATCTGTGTAAGATATAAGAT+TGG 0.509886 4_2:-70032511 Msa0619030:three_prime_UTR
TTGGTCTACTGAAGTTGAAT+GGG 0.524981 4_2:-70033098 Msa0619030:CDS
AGCTTTGTGAAGCCTTTCCA+TGG 0.525881 4_2:+70032661 None:intergenic
TCTCAGGGTCTTTGGAAACA+AGG 0.527412 4_2:+70033834 None:intergenic
AACCTTCGAGAGAAATGAAA+GGG 0.527520 4_2:+70036002 None:intergenic
ATCAGCACCAAGTTTGTCAA+TGG 0.528794 4_2:+70033862 None:intergenic
CGGGCTATACACGGTGATCC+CGG 0.532660 4_2:+70034030 None:intergenic
GCATGAAATCAACACGGCCA+TGG 0.534341 4_2:-70032678 Msa0619030:CDS
ATGGAAAGACAGAGAGCTCA+AGG 0.539760 4_2:+70033043 None:intergenic
GTGATCCCGGCACACAGAAG+TGG 0.541709 4_2:+70034043 None:intergenic
TATAAAGGGACACGAACCTA+TGG 0.552541 4_2:-70034145 Msa0619030:CDS
AAATCAACACGGCCATGGAA+AGG 0.552965 4_2:-70032673 Msa0619030:CDS
CTTATCGGAGGGAGTAACAT+TGG 0.554132 4_2:-70032779 Msa0619030:CDS
AATGGGAAACTGGTCACTGT+AGG 0.556394 4_2:-70033081 Msa0619030:CDS
CAAAGACCCTGAGAAAATGA+AGG 0.559572 4_2:-70033825 Msa0619030:intron
TGGAGGGATGAAAGAGACTC+AGG 0.563071 4_2:-70032759 Msa0619030:CDS
ACTGAGGCCATTGACAAACT+TGG 0.564477 4_2:-70033869 Msa0619030:CDS
TTGATTCTTCAACATATGTG+TGG 0.565485 4_2:-70032576 Msa0619030:three_prime_UTR
GAAGTGGAGCACCAGCGTCA+AGG 0.573782 4_2:+70034059 None:intergenic
GAGAGAAATGAAAGGGAGAG+AGG 0.573790 4_2:+70036009 None:intergenic
GAACCTTCGAGAGAAATGAA+AGG 0.580152 4_2:+70036001 None:intergenic
CTACAAACTTGAGAAGGAGT+TGG 0.582204 4_2:+70032607 None:intergenic
AGAGAAATGAAAGGGAGAGA+GGG 0.584775 4_2:+70036010 None:intergenic
TATTAGTACCTCTCCAAACA+AGG 0.586732 4_2:-70033894 Msa0619030:CDS
CACACTCTCAAGAACGATTG+GGG 0.590819 4_2:-70035832 Msa0619030:CDS
GCAGGCTGCTATGGGAACCA+TGG 0.590820 4_2:-70033169 Msa0619030:intron
TATTATGGTATGACTGAACC+AGG 0.592818 4_2:-70034001 Msa0619030:CDS
TGGCCTCTACAAACTTGAGA+AGG 0.595694 4_2:+70032601 None:intergenic
GCAAACATTTGGGAGTGGCA+GGG 0.595862 4_2:-70033979 Msa0619030:CDS
TACCGAATTTGATTGCAACA+TGG 0.599803 4_2:+70033942 None:intergenic
ACCAGGCAAACATTTGGGAG+TGG 0.602207 4_2:-70033984 Msa0619030:CDS
AAAATCAGAATAGCCACCAT+AGG 0.602620 4_2:+70034129 None:intergenic
GCCCAACCAAAGGCTTTGAG+TGG 0.602686 4_2:+70036053 None:intergenic
GTCTCTAGCAGCCCAACCAA+AGG 0.603362 4_2:+70036043 None:intergenic
TGGAAAGACAGAGAGCTCAA+GGG 0.604195 4_2:+70033044 None:intergenic
TCGGAGGGAGTAACATTGGA+GGG 0.606287 4_2:-70032775 Msa0619030:CDS
TAGACCAAGCAGTGGCATCA+GGG 0.607212 4_2:+70033113 None:intergenic
ATCGGAGGGAGTAACATTGG+AGG 0.607417 4_2:-70032776 Msa0619030:CDS
ACTCCTTCTCAAGTTTGTAG+AGG 0.609994 4_2:-70032604 Msa0619030:exon
GTGGGTGATAACGTTGGTGT+TGG 0.610605 4_2:-70034259 Msa0619030:CDS
GAAACTGAACTACATACCGC+TGG 0.611677 4_2:+70034095 None:intergenic
AAATGAGAAATCAAAAGTTG+AGG 0.620431 4_2:+70032551 None:intergenic
CCCAACCAAAGGCTTTGAGT+GGG 0.624643 4_2:+70036054 None:intergenic
GACAACTTACCCCTTGACGC+TGG 0.625682 4_2:-70034070 Msa0619030:CDS
GGAAAGACAGAGAGCTCAAG+GGG 0.626737 4_2:+70033045 None:intergenic
AGTGTGAAAATTCTATATTG+TGG 0.629238 4_2:-70035874 Msa0619030:CDS
CTCTCCAAACAAGGAAACTG+AGG 0.630189 4_2:-70033885 Msa0619030:CDS
GAAGTGTAATAGCGTAGTGT+TGG 0.631497 4_2:+70036162 None:intergenic
ATGGGAAACTGGTCACTGTA+GGG 0.633427 4_2:-70033080 Msa0619030:CDS
CATATGTTGAAGAATCAAAG+TGG 0.634468 4_2:+70032581 None:intergenic
ATAATAACAGCAGAGATCGA+TGG 0.635483 4_2:-70036099 Msa0619030:exon
GGTGTATTTATTGACTTACA+CGG 0.636572 4_2:+70036183 None:intergenic
AGTGGAGCACCAGCGTCAAG+GGG 0.637977 4_2:+70034061 None:intergenic
AAAGGGACACGAACCTATGG+TGG 0.638008 4_2:-70034142 Msa0619030:CDS
TGTGTCTATGATGTAGTCCA+TGG 0.640415 4_2:+70033152 None:intergenic
CAGGAGATGCTCGATTTCTG+CGG 0.641521 4_2:-70032740 Msa0619030:CDS
ATACTTCATCGGGCTATACA+CGG 0.644181 4_2:+70034021 None:intergenic
TTCAGAGTGGGTGATAACGT+TGG 0.661444 4_2:-70034265 Msa0619030:CDS
GCAGGACGGAAGCTTATCGG+AGG 0.666483 4_2:-70032791 Msa0619030:intron
CAGGACGGAAGCTTATCGGA+GGG 0.671442 4_2:-70032790 Msa0619030:CDS
ATATCGGTTTGTGATTGATG+TGG 0.686371 4_2:-70032630 Msa0619030:CDS
AACTTCAGTAGACCAAGCAG+TGG 0.689529 4_2:+70033105 None:intergenic
AGACATACCCAGGAACAACA+GGG 0.709790 4_2:+70035797 None:intergenic
TAAGATGCATGAAATCAACA+CGG 0.753982 4_2:-70032684 Msa0619030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTTTGATTTTTGT+AGG - chr4_2:70032568-70032587 Msa0619030:three_prime_UTR 10.0%
!!! TTTTTATTTTGATTTTTGTA+GGG - chr4_2:70032569-70032588 Msa0619030:three_prime_UTR 10.0%
!!! AAATTTAAAATATTTTGTGT+AGG + chr4_2:70034872-70034891 None:intergenic 10.0%
!! TAAATATATATTCAGAAATA+AGG + chr4_2:70034995-70035014 None:intergenic 10.0%
!!! TGTATAATATTTTATAAGAT+TGG - chr4_2:70036197-70036216 Msa0619030:five_prime_UTR 10.0%
!! TATTTGATTGTTAAATTAGT+TGG - chr4_2:70033996-70034015 Msa0619030:CDS 15.0%
!! TAGAATAATATAGTAATTGT+TGG - chr4_2:70034897-70034916 Msa0619030:intron 15.0%
!!! TTTTCATATTTGTTTTCTTT+TGG - chr4_2:70035213-70035232 Msa0619030:intron 15.0%
!! TGAAAATTTGGATAATTAAT+TGG + chr4_2:70035656-70035675 None:intergenic 15.0%
!! TGTTGAATTGAATAGAAAAA+TGG - chr4_2:70032824-70032843 Msa0619030:intron 20.0%
!!! TAATTCACTTTATTTACCTT+TGG - chr4_2:70033033-70033052 Msa0619030:intron 20.0%
!! ATTTAATTATCTGTTCGTAA+GGG + chr4_2:70033357-70033376 None:intergenic 20.0%
!! TATTTAATTATCTGTTCGTA+AGG + chr4_2:70033358-70033377 None:intergenic 20.0%
!! TGTTAAACATGATTAAAAAC+AGG + chr4_2:70033406-70033425 None:intergenic 20.0%
!!! GATTCAAATTCTGTTTTTTA+AGG + chr4_2:70033447-70033466 None:intergenic 20.0%
!!! TTTTCAAATTATTAGTGTGT+CGG + chr4_2:70033530-70033549 None:intergenic 20.0%
!!! TGTTCATTCTTTTTCATTAA+TGG - chr4_2:70033715-70033734 Msa0619030:intron 20.0%
!!! TCTTTTTCATTAATGGTTTA+CGG - chr4_2:70033722-70033741 Msa0619030:intron 20.0%
!! AAACTATTAATCAATAGTCA+AGG + chr4_2:70034030-70034049 None:intergenic 20.0%
!! ATCCATAGTTTACTTATAAA+TGG - chr4_2:70034799-70034818 Msa0619030:intron 20.0%
!! TCCATAGTTTACTTATAAAT+GGG - chr4_2:70034800-70034819 Msa0619030:intron 20.0%
!! TTTGTTTATATACTCATTGA+CGG + chr4_2:70035068-70035087 None:intergenic 20.0%
!!! GTTTAAATACAATTTTATGC+AGG - chr4_2:70035299-70035318 Msa0619030:intron 20.0%
!! CAATTCAAATTCACATATTA+TGG + chr4_2:70035514-70035533 None:intergenic 20.0%
! AAAAGGAAAAAGAAAGAGAA+AGG + chr4_2:70032510-70032529 None:intergenic 25.0%
!!! TTTGATTTTTGTAGGGAAAA+TGG - chr4_2:70032576-70032595 Msa0619030:three_prime_UTR 25.0%
! AGTGTGAAAATTCTATATTG+TGG - chr4_2:70032612-70032631 Msa0619030:CDS 25.0%
! CATACTTGTCTATTAGAATT+TGG - chr4_2:70032999-70033018 Msa0619030:intron 25.0%
! AAACATACACATAATTCCAA+AGG + chr4_2:70033052-70033071 None:intergenic 25.0%
!! TTTGGAATTATGTGTATGTT+TGG - chr4_2:70033051-70033070 Msa0619030:CDS 25.0%
! AACTTATGAAAACACCTTAT+GGG - chr4_2:70033128-70033147 Msa0619030:CDS 25.0%
! AAACATGATTAAAAACAGGT+AGG + chr4_2:70033402-70033421 None:intergenic 25.0%
! TAATCATGTTTAACACACTT+AGG - chr4_2:70033411-70033430 Msa0619030:intron 25.0%
! TTAAGTGTAATTACAAGTGT+CGG - chr4_2:70033560-70033579 Msa0619030:intron 25.0%
! CATTAATCCTAGTAAACTAT+TGG - chr4_2:70033762-70033781 Msa0619030:intron 25.0%
!!! ATGTAATTTTGAGGTTACAT+GGG + chr4_2:70033788-70033807 None:intergenic 25.0%
!!! TATGTAATTTTGAGGTTACA+TGG + chr4_2:70033789-70033808 None:intergenic 25.0%
!! AGACACATTATGTAATTTTG+AGG + chr4_2:70033797-70033816 None:intergenic 25.0%
! CTTGCTTATAAGTTATATGA+AGG - chr4_2:70034091-70034110 Msa0619030:CDS 25.0%
! AATGTGAAAAAATTCAGAGT+GGG - chr4_2:70034209-70034228 Msa0619030:CDS 25.0%
! TTATAGGTAAATACAGGTTT+AGG + chr4_2:70034314-70034333 None:intergenic 25.0%
! GTTCTATATAGGAGTTATTA+TGG - chr4_2:70034768-70034787 Msa0619030:intron 25.0%
!!! ATCCAGAAATTTTGAAAACT+GGG + chr4_2:70035045-70035064 None:intergenic 25.0%
!!! AACAAAAACAATGGATTGAT+TGG - chr4_2:70035249-70035268 Msa0619030:intron 25.0%
! AATTGACAGAGAATTATTGA+TGG + chr4_2:70035483-70035502 None:intergenic 25.0%
! TAAATGTTTCAGTTCAGATT+TGG + chr4_2:70035568-70035587 None:intergenic 25.0%
! ACATTAGACATGTGAAAATT+TGG + chr4_2:70035668-70035687 None:intergenic 25.0%
! AAATGAGAAATCAAAAGTTG+AGG + chr4_2:70035938-70035957 None:intergenic 25.0%
! ATCTGTGTAAGATATAAGAT+TGG - chr4_2:70035975-70035994 Msa0619030:intron 25.0%
! ATTGTCGTCTAATTTATTGT+AGG - chr4_2:70036015-70036034 Msa0619030:CDS 25.0%
!! GGTGTATTTATTGACTTACA+CGG + chr4_2:70032306-70032325 None:intergenic 30.0%
AAGACTGAGATGAAAAGAAA+AGG + chr4_2:70032527-70032546 None:intergenic 30.0%
CTATTCAATTCAACAGAAGA+CGG + chr4_2:70032819-70032838 None:intergenic 30.0%
AATTTGAGGGGTAAAGAATT+GGG + chr4_2:70032865-70032884 None:intergenic 30.0%
TAATTTGAGGGGTAAAGAAT+TGG + chr4_2:70032866-70032885 None:intergenic 30.0%
GAACTTATGAAAACACCTTA+TGG - chr4_2:70033127-70033146 Msa0619030:CDS 30.0%
AGCTTATGAAAATTCCCATA+AGG + chr4_2:70033145-70033164 None:intergenic 30.0%
TAGGTGGTTATTCATATAAG+AGG + chr4_2:70033383-70033402 None:intergenic 30.0%
!! TTTGCAACTATTCACTTTTG+AGG + chr4_2:70033469-70033488 None:intergenic 30.0%
! GATGATATGTATGCGATTTT+TGG - chr4_2:70033896-70033915 Msa0619030:CDS 30.0%
ATTAATAGTTTATGCGTGCA+TGG - chr4_2:70034039-70034058 Msa0619030:CDS 30.0%
CTTTGTGCAATAGTCAATAT+TGG - chr4_2:70034062-70034081 Msa0619030:CDS 30.0%
AGTTATATGAAGGTAAAACC+AGG - chr4_2:70034101-70034120 Msa0619030:CDS 30.0%
!!! TTAACTTGCATTGACTTTTG+TGG - chr4_2:70034136-70034155 Msa0619030:CDS 30.0%
CAATGTGAAAAAATTCAGAG+TGG - chr4_2:70034208-70034227 Msa0619030:CDS 30.0%
TGAGAATTGCAATCAAGATT+TGG - chr4_2:70034277-70034296 Msa0619030:CDS 30.0%
ACCTATAACTCTCCTTATAA+AGG - chr4_2:70034326-70034345 Msa0619030:intron 30.0%
CCTATAACTCTCCTTATAAA+GGG - chr4_2:70034327-70034346 Msa0619030:intron 30.0%
TCATACCATAATACTTCATC+GGG + chr4_2:70034478-70034497 None:intergenic 30.0%
GTCATACCATAATACTTCAT+CGG + chr4_2:70034479-70034498 None:intergenic 30.0%
! ATCAAATTCGGTAAAGCATT+TGG - chr4_2:70034554-70034573 Msa0619030:intron 30.0%
! TCAAATTCGGTAAAGCATTT+GGG - chr4_2:70034555-70034574 Msa0619030:intron 30.0%
! ATCTTACCTTCATTTTCTCA+GGG + chr4_2:70034670-70034689 None:intergenic 30.0%
! TATCTTACCTTCATTTTCTC+AGG + chr4_2:70034671-70034690 None:intergenic 30.0%
!!! TGGTTTTAAAGTTAATGGTG+TGG + chr4_2:70034694-70034713 None:intergenic 30.0%
!!! CAGGTTGGTTTTAAAGTTAA+TGG + chr4_2:70034699-70034718 None:intergenic 30.0%
ACGAAATAAGAGTAAAACAG+CGG + chr4_2:70034742-70034761 None:intergenic 30.0%
TTCGTCATACAGTTCTATAT+AGG - chr4_2:70034757-70034776 Msa0619030:intron 30.0%
GCCCATTTATAAGTAAACTA+TGG + chr4_2:70034804-70034823 None:intergenic 30.0%
TAGTTTACTTATAAATGGGC+AGG - chr4_2:70034804-70034823 Msa0619030:intron 30.0%
GAGAATAAGTGTAGGTTATT+TGG + chr4_2:70034931-70034950 None:intergenic 30.0%
! GGGGCACTATATATATTAAT+TGG + chr4_2:70035024-70035043 None:intergenic 30.0%
!! TCCAGAAATTTTGAAAACTG+GGG + chr4_2:70035044-70035063 None:intergenic 30.0%
!! GATCCAGAAATTTTGAAAAC+TGG + chr4_2:70035046-70035065 None:intergenic 30.0%
CCTTTCTATTATTCAAACTC+AGG + chr4_2:70035106-70035125 None:intergenic 30.0%
CCTGAGTTTGAATAATAGAA+AGG - chr4_2:70035103-70035122 Msa0619030:intron 30.0%
GAGAACACATGATTTGATTA+TGG + chr4_2:70035184-70035203 None:intergenic 30.0%
!! TATTTGTTTTCTTTTGGACC+AGG - chr4_2:70035219-70035238 Msa0619030:intron 30.0%
!!! TTGTTTTTGTTACAACAACC+TGG + chr4_2:70035240-70035259 None:intergenic 30.0%
GGTTGTTGTAACAAAAACAA+TGG - chr4_2:70035240-70035259 Msa0619030:intron 30.0%
TAAGATGCATGAAATCAACA+CGG - chr4_2:70035802-70035821 Msa0619030:intron 30.0%
ACAAAGCTGATGTGAAATAT+CGG - chr4_2:70035840-70035859 Msa0619030:CDS 30.0%
CATATGTTGAAGAATCAAAG+TGG + chr4_2:70035908-70035927 None:intergenic 30.0%
TTGATTCTTCAACATATGTG+TGG - chr4_2:70035910-70035929 Msa0619030:intron 30.0%
ATAATAACAGCAGAGATCGA+TGG - chr4_2:70032387-70032406 Msa0619030:three_prime_UTR 35.0%
AACCTTCGAGAGAAATGAAA+GGG + chr4_2:70032487-70032506 None:intergenic 35.0%
AAAGAAAAACAGACATACCC+AGG + chr4_2:70032702-70032721 None:intergenic 35.0%
TTCTTTACCCCTCAAATTAG+AGG - chr4_2:70032867-70032886 Msa0619030:intron 35.0%
GTATGACATAATCATCAAGC+AGG + chr4_2:70032980-70032999 None:intergenic 35.0%
CATGATTAAAAACAGGTAGG+TGG + chr4_2:70033399-70033418 None:intergenic 35.0%
TACTTTGCAACTATGAAGCA+CGG + chr4_2:70033644-70033663 None:intergenic 35.0%
CTGTGTTACAAATGAAGTCT+AGG - chr4_2:70033815-70033834 Msa0619030:intron 35.0%
!! GATATGTATGCGATTTTTGG+TGG - chr4_2:70033899-70033918 Msa0619030:CDS 35.0%
CAATATTCACGATCTAGAAG+CGG - chr4_2:70033930-70033949 Msa0619030:CDS 35.0%
! TCACTGCAGTTTTCTATCTT+TGG - chr4_2:70033959-70033978 Msa0619030:CDS 35.0%
! TTTTGCAGGCATGAAATTGT+TGG - chr4_2:70034164-70034183 Msa0619030:CDS 35.0%
GGAGAGTTATAGGTAAATAC+AGG + chr4_2:70034320-70034339 None:intergenic 35.0%
CCCTTTATAAGGAGAGTTAT+AGG + chr4_2:70034330-70034349 None:intergenic 35.0%
AAAATCAGAATAGCCACCAT+AGG + chr4_2:70034360-70034379 None:intergenic 35.0%
! TATAGCCCGATGAAGTATTA+TGG - chr4_2:70034470-70034489 Msa0619030:intron 35.0%
TATTATGGTATGACTGAACC+AGG - chr4_2:70034485-70034504 Msa0619030:intron 35.0%
TACCGAATTTGATTGCAACA+TGG + chr4_2:70034547-70034566 None:intergenic 35.0%
TATTAGTACCTCTCCAAACA+AGG - chr4_2:70034592-70034611 Msa0619030:intron 35.0%
GTCAAGTGTGATTTAAGTGT+GGG + chr4_2:70034960-70034979 None:intergenic 35.0%
TGTCAAGTGTGATTTAAGTG+TGG + chr4_2:70034961-70034980 None:intergenic 35.0%
!! CCAGAAATTTTGAAAACTGG+GGG + chr4_2:70035043-70035062 None:intergenic 35.0%
! AATTTTATGCAGGCTGCTAT+GGG - chr4_2:70035309-70035328 Msa0619030:intron 35.0%
TTGGTCTACTGAAGTTGAAT+GGG - chr4_2:70035388-70035407 Msa0619030:intron 35.0%
!! ATATCGGTTTGTGATTGATG+TGG - chr4_2:70035856-70035875 Msa0619030:CDS 35.0%
GTCTAATTTATTGTAGGCTC+AGG - chr4_2:70036021-70036040 Msa0619030:CDS 35.0%
GAAGTGTAATAGCGTAGTGT+TGG + chr4_2:70032327-70032346 None:intergenic 40.0%
AGAGAAATGAAAGGGAGAGA+GGG + chr4_2:70032479-70032498 None:intergenic 40.0%
GAACCTTCGAGAGAAATGAA+AGG + chr4_2:70032488-70032507 None:intergenic 40.0%
TACACACTCTCAAGAACGAT+TGG - chr4_2:70032652-70032671 Msa0619030:CDS 40.0%
ACACACTCTCAAGAACGATT+GGG - chr4_2:70032653-70032672 Msa0619030:CDS 40.0%
TTTACCCCTCAAATTAGAGG+TGG - chr4_2:70032870-70032889 Msa0619030:intron 40.0%
AACCTCCACCTCTAATTTGA+GGG + chr4_2:70032878-70032897 None:intergenic 40.0%
AGTTGCAAAGCTATGAAGCA+CGG - chr4_2:70033480-70033499 Msa0619030:intron 40.0%
AAAGCTATGAAGCACGGATA+CGG - chr4_2:70033486-70033505 Msa0619030:intron 40.0%
ACATGGGCCAATAGTTTACT+AGG + chr4_2:70033772-70033791 None:intergenic 40.0%
CACTGCAAAGACTGGAAATA+AGG - chr4_2:70033874-70033893 Msa0619030:CDS 40.0%
! CTGCAGTTTTCTATCTTTGG+AGG - chr4_2:70033962-70033981 Msa0619030:CDS 40.0%
AGGTAAAACCAGGACATCTT+TGG - chr4_2:70034111-70034130 Msa0619030:CDS 40.0%
GGTAAAACCAGGACATCTTT+GGG - chr4_2:70034112-70034131 Msa0619030:CDS 40.0%
AGTTAATCCCAAAGATGTCC+TGG + chr4_2:70034122-70034141 None:intergenic 40.0%
! CTTTTGTGGTTGTGTTTTGC+AGG - chr4_2:70034150-70034169 Msa0619030:CDS 40.0%
TAGGTTCGTGTCCCTTTATA+AGG + chr4_2:70034341-70034360 None:intergenic 40.0%
TATAAAGGGACACGAACCTA+TGG - chr4_2:70034341-70034360 Msa0619030:intron 40.0%
! TGGTGGCTATTCTGATTTTG+TGG - chr4_2:70034361-70034380 Msa0619030:intron 40.0%
! ATTTTGTGGTTGTTCACCAG+CGG - chr4_2:70034375-70034394 Msa0619030:intron 40.0%
ATACTTCATCGGGCTATACA+CGG + chr4_2:70034468-70034487 None:intergenic 40.0%
ACTGAACCAGGCAAACATTT+GGG - chr4_2:70034497-70034516 Msa0619030:intron 40.0%
GGCCATGTTGCAATCAAATT+CGG - chr4_2:70034542-70034561 Msa0619030:intron 40.0%
ATCAGCACCAAGTTTGTCAA+TGG + chr4_2:70034627-70034646 None:intergenic 40.0%
! CTTCATTTTCTCAGGGTCTT+TGG + chr4_2:70034663-70034682 None:intergenic 40.0%
CAAAGACCCTGAGAAAATGA+AGG - chr4_2:70034661-70034680 Msa0619030:intron 40.0%
AAAACCAACCTGTTTCGTCT+AGG - chr4_2:70034707-70034726 Msa0619030:intron 40.0%
ATAACCTAGACGAAACAGGT+TGG + chr4_2:70034714-70034733 None:intergenic 40.0%
GGCAAAGAGAGAATAAGTGT+AGG + chr4_2:70034939-70034958 None:intergenic 40.0%
! CCCCCAGTTTTCAAAATTTC+TGG - chr4_2:70035040-70035059 Msa0619030:intron 40.0%
GTCACAGATGTAGGCAAAAT+TGG - chr4_2:70035151-70035170 Msa0619030:intron 40.0%
! CAATTTTATGCAGGCTGCTA+TGG - chr4_2:70035308-70035327 Msa0619030:intron 40.0%
TGTGTCTATGATGTAGTCCA+TGG + chr4_2:70035337-70035356 None:intergenic 40.0%
CTTGGTCTACTGAAGTTGAA+TGG - chr4_2:70035387-70035406 Msa0619030:intron 40.0%
ACTGAAGTTGAATGGGAAAC+TGG - chr4_2:70035395-70035414 Msa0619030:intron 40.0%
TCTGTCTTTCCATTAGTTGC+AGG - chr4_2:70035453-70035472 Msa0619030:intron 40.0%
GATGGTTTACCTGCAACTAA+TGG + chr4_2:70035465-70035484 None:intergenic 40.0%
GGAAGTAACAGACTCATTCT+TGG + chr4_2:70035547-70035566 None:intergenic 40.0%
ATGTCTAATGTCTTGACTGC+AGG - chr4_2:70035677-70035696 Msa0619030:intron 40.0%
CTACAAACTTGAGAAGGAGT+TGG + chr4_2:70035882-70035901 None:intergenic 40.0%
ACTCCTTCTCAAGTTTGTAG+AGG - chr4_2:70035882-70035901 Msa0619030:CDS 40.0%
!! CACAGATCTTAGCTTTTCTC+AGG + chr4_2:70035962-70035981 None:intergenic 40.0%
! TGTCTGACTAAAAGCGTGTT+TGG - chr4_2:70036080-70036099 Msa0619030:CDS 40.0%
! CTAAAAGCGTGTTTGGTCTT+AGG - chr4_2:70036087-70036106 Msa0619030:exon 40.0%
!! AAAGGCTTTGAGTGGGAGTT+CGG + chr4_2:70032428-70032447 None:intergenic 45.0%
GAGAGAAATGAAAGGGAGAG+AGG + chr4_2:70032480-70032499 None:intergenic 45.0%
CTCCCTTTCATTTCTCTCGA+AGG - chr4_2:70032482-70032501 Msa0619030:three_prime_UTR 45.0%
CACACTCTCAAGAACGATTG+GGG - chr4_2:70032654-70032673 Msa0619030:CDS 45.0%
ACTACTTACCCTGTTGTTCC+TGG - chr4_2:70032681-70032700 Msa0619030:CDS 45.0%
CTACTTACCCTGTTGTTCCT+GGG - chr4_2:70032682-70032701 Msa0619030:CDS 45.0%
AGACATACCCAGGAACAACA+GGG + chr4_2:70032692-70032711 None:intergenic 45.0%
ACCTCCACCTCTAATTTGAG+GGG + chr4_2:70032877-70032896 None:intergenic 45.0%
CAACCTCCACCTCTAATTTG+AGG + chr4_2:70032879-70032898 None:intergenic 45.0%
! TCTGTTCGTAAGGGCTTGTT+TGG + chr4_2:70033348-70033367 None:intergenic 45.0%
!! TACAAGTGTCGGTCTTGTGT+TGG - chr4_2:70033571-70033590 Msa0619030:intron 45.0%
TTCAAGTGCACTGCAAAGAC+TGG - chr4_2:70033866-70033885 Msa0619030:CDS 45.0%
GTTGGCGTTGTGACAAAAGT+TGG - chr4_2:70034182-70034201 Msa0619030:CDS 45.0%
! TTCAGAGTGGGTGATAACGT+TGG - chr4_2:70034221-70034240 Msa0619030:CDS 45.0%
GAAACTGAACTACATACCGC+TGG + chr4_2:70034394-70034413 None:intergenic 45.0%
GACTGAACCAGGCAAACATT+TGG - chr4_2:70034496-70034515 Msa0619030:intron 45.0%
! CTCAGTTTCCTTGTTTGGAG+AGG + chr4_2:70034603-70034622 None:intergenic 45.0%
CTCTCCAAACAAGGAAACTG+AGG - chr4_2:70034601-70034620 Msa0619030:intron 45.0%
ATGGCCTCAGTTTCCTTGTT+TGG + chr4_2:70034608-70034627 None:intergenic 45.0%
ACTGAGGCCATTGACAAACT+TGG - chr4_2:70034617-70034636 Msa0619030:intron 45.0%
! TCTCAGGGTCTTTGGAAACA+AGG + chr4_2:70034655-70034674 None:intergenic 45.0%
GAGCATAACCTAGACGAAAC+AGG + chr4_2:70034718-70034737 None:intergenic 45.0%
TTATAAATGGGCAGGTCGCT+AGG - chr4_2:70034812-70034831 Msa0619030:intron 45.0%
TATAAATGGGCAGGTCGCTA+GGG - chr4_2:70034813-70034832 Msa0619030:intron 45.0%
ATGCATGTGTGATGTGGTGT+GGG - chr4_2:70034840-70034859 Msa0619030:intron 45.0%
AACTCTGCAGTCACAGATGT+AGG - chr4_2:70035142-70035161 Msa0619030:intron 45.0%
AACTTCAGTAGACCAAGCAG+TGG + chr4_2:70035384-70035403 None:intergenic 45.0%
AATGGGAAACTGGTCACTGT+AGG - chr4_2:70035405-70035424 Msa0619030:intron 45.0%
ATGGGAAACTGGTCACTGTA+GGG - chr4_2:70035406-70035425 Msa0619030:intron 45.0%
TGGAAAGACAGAGAGCTCAA+GGG + chr4_2:70035445-70035464 None:intergenic 45.0%
ATGGAAAGACAGAGAGCTCA+AGG + chr4_2:70035446-70035465 None:intergenic 45.0%
CTAATGTCTTGACTGCAGGA+CGG - chr4_2:70035681-70035700 Msa0619030:intron 45.0%
CTTATCGGAGGGAGTAACAT+TGG - chr4_2:70035707-70035726 Msa0619030:intron 45.0%
AAATCAACACGGCCATGGAA+AGG - chr4_2:70035813-70035832 Msa0619030:CDS 45.0%
! AGCTTTGTGAAGCCTTTCCA+TGG + chr4_2:70035828-70035847 None:intergenic 45.0%
TGGCCTCTACAAACTTGAGA+AGG + chr4_2:70035888-70035907 None:intergenic 45.0%
TTGAGTGGGAGTTCGGTTTC+TGG + chr4_2:70032421-70032440 None:intergenic 50.0%
GAACTCCCACTCAAAGCCTT+TGG - chr4_2:70032427-70032446 Msa0619030:three_prime_UTR 50.0%
TCCCACTCAAAGCCTTTGGT+TGG - chr4_2:70032431-70032450 Msa0619030:three_prime_UTR 50.0%
!! CCCAACCAAAGGCTTTGAGT+GGG + chr4_2:70032435-70032454 None:intergenic 50.0%
CCCACTCAAAGCCTTTGGTT+GGG - chr4_2:70032432-70032451 Msa0619030:three_prime_UTR 50.0%
CAGACATACCCAGGAACAAC+AGG + chr4_2:70032693-70032712 None:intergenic 50.0%
ACCCCTCAAATTAGAGGTGG+AGG - chr4_2:70032873-70032892 Msa0619030:intron 50.0%
TGAAGCACGGATACGGACAT+CGG - chr4_2:70033493-70033512 Msa0619030:intron 50.0%
! TGTCGGTCTTGTGTTGGAGT+CGG - chr4_2:70033577-70033596 Msa0619030:intron 50.0%
TATGAAGCACGGACACTCCT+CGG + chr4_2:70033633-70033652 None:intergenic 50.0%
! GTGGGTGATAACGTTGGTGT+TGG - chr4_2:70034227-70034246 Msa0619030:CDS 50.0%
AAAGGGACACGAACCTATGG+TGG - chr4_2:70034344-70034363 Msa0619030:intron 50.0%
ACCAGGCAAACATTTGGGAG+TGG - chr4_2:70034502-70034521 Msa0619030:intron 50.0%
GCAAACATTTGGGAGTGGCA+GGG - chr4_2:70034507-70034526 Msa0619030:intron 50.0%
! CGGTAAAGCATTTGGGCTGA+AGG - chr4_2:70034562-70034581 Msa0619030:intron 50.0%
GATGCATGTGTGATGTGGTG+TGG - chr4_2:70034839-70034858 Msa0619030:intron 50.0%
TAGACCAAGCAGTGGCATCA+GGG + chr4_2:70035376-70035395 None:intergenic 50.0%
GGAAAGACAGAGAGCTCAAG+GGG + chr4_2:70035444-70035463 None:intergenic 50.0%
ACTGCAGGACGGAAGCTTAT+CGG - chr4_2:70035692-70035711 Msa0619030:intron 50.0%
ATCGGAGGGAGTAACATTGG+AGG - chr4_2:70035710-70035729 Msa0619030:intron 50.0%
TCGGAGGGAGTAACATTGGA+GGG - chr4_2:70035711-70035730 Msa0619030:intron 50.0%
TGGAGGGATGAAAGAGACTC+AGG - chr4_2:70035727-70035746 Msa0619030:intron 50.0%
CAGGAGATGCTCGATTTCTG+CGG - chr4_2:70035746-70035765 Msa0619030:intron 50.0%
GCATGAAATCAACACGGCCA+TGG - chr4_2:70035808-70035827 Msa0619030:CDS 50.0%
!! GCCCAACCAAAGGCTTTGAG+TGG + chr4_2:70032436-70032455 None:intergenic 55.0%
GTCTCTAGCAGCCCAACCAA+AGG + chr4_2:70032446-70032465 None:intergenic 55.0%
TGGGCTGCTAGAGACACTTC+TGG - chr4_2:70032451-70032470 Msa0619030:three_prime_UTR 55.0%
GATTAGGCGTGTCCTGGTGT+CGG + chr4_2:70033611-70033630 None:intergenic 55.0%
GCGTCAAGGGGTAAGTTGTC+AGG + chr4_2:70034416-70034435 None:intergenic 55.0%
GACAACTTACCCCTTGACGC+TGG - chr4_2:70034416-70034435 Msa0619030:intron 55.0%
! AAGTGGAGCACCAGCGTCAA+GGG + chr4_2:70034429-70034448 None:intergenic 55.0%
GCCACTCCCAAATGTTTGCC+TGG + chr4_2:70034506-70034525 None:intergenic 55.0%
GGCAAACATTTGGGAGTGGC+AGG - chr4_2:70034506-70034525 Msa0619030:intron 55.0%
GGACGGATGCATGTGTGATG+TGG - chr4_2:70034834-70034853 Msa0619030:intron 55.0%
CATTCCCTGATGCCACTGCT+TGG - chr4_2:70035369-70035388 Msa0619030:intron 55.0%
GTAGACCAAGCAGTGGCATC+AGG + chr4_2:70035377-70035396 None:intergenic 55.0%
CAGGACGGAAGCTTATCGGA+GGG - chr4_2:70035696-70035715 Msa0619030:intron 55.0%
ACCAGGACACGCCTAATCCG+AGG - chr4_2:70033613-70033632 Msa0619030:intron 60.0%
! TCCTCGGATTAGGCGTGTCC+TGG + chr4_2:70033617-70033636 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+AGG + chr4_2:70033627-70033646 None:intergenic 60.0%
! AGTGGAGCACCAGCGTCAAG+GGG + chr4_2:70034428-70034447 None:intergenic 60.0%
! GAAGTGGAGCACCAGCGTCA+AGG + chr4_2:70034430-70034449 None:intergenic 60.0%
GGTGCTCCACTTCTGTGTGC+CGG - chr4_2:70034437-70034456 Msa0619030:intron 60.0%
GTGCTCCACTTCTGTGTGCC+GGG - chr4_2:70034438-70034457 Msa0619030:intron 60.0%
GTGATCCCGGCACACAGAAG+TGG + chr4_2:70034446-70034465 None:intergenic 60.0%
CGGGCTATACACGGTGATCC+CGG + chr4_2:70034459-70034478 None:intergenic 60.0%
CATTTGGGAGTGGCAGGGCT+TGG - chr4_2:70034512-70034531 Msa0619030:intron 60.0%
AATGGGCAGGTCGCTAGGGA+CGG - chr4_2:70034817-70034836 Msa0619030:intron 60.0%
GCAGGCTGCTATGGGAACCA+TGG - chr4_2:70035317-70035336 Msa0619030:intron 60.0%
! GAGAGCTCAAGGGGCTTGCT+AGG + chr4_2:70035435-70035454 None:intergenic 60.0%
GCAGGACGGAAGCTTATCGG+AGG - chr4_2:70035695-70035714 Msa0619030:intron 60.0%
TCGGACACGTGTCCGACACC+AGG - chr4_2:70033596-70033615 Msa0619030:intron 65.0%
TTGGGAGTGGCAGGGCTTGG+TGG - chr4_2:70034515-70034534 Msa0619030:intron 65.0%
! TGGGAGTGGCAGGGCTTGGT+GGG - chr4_2:70034516-70034535 Msa0619030:intron 65.0%
!! GTGGCAGGGCTTGGTGGGTT+AGG - chr4_2:70034521-70034540 Msa0619030:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 70032269 70036239 70032269 ID=Msa0619030;Name=Msa0619030
chr4_2 mRNA 70032269 70036239 70032269 ID=Msa0619030-mRNA-1;Parent=Msa0619030;Name=Msa0619030-mRNA-1;_AED=0.10;_eAED=0.10;_QI=137|1|1|1|1|1|5|338|359
chr4_2 exon 70032269 70032809 70032269 ID=Msa0619030-mRNA-1:exon:20368;Parent=Msa0619030-mRNA-1
chr4_2 exon 70033034 70033187 70033034 ID=Msa0619030-mRNA-1:exon:20367;Parent=Msa0619030-mRNA-1
chr4_2 exon 70033826 70034336 70033826 ID=Msa0619030-mRNA-1:exon:20366;Parent=Msa0619030-mRNA-1
chr4_2 exon 70035805 70035918 70035805 ID=Msa0619030-mRNA-1:exon:20365;Parent=Msa0619030-mRNA-1
chr4_2 exon 70036005 70036239 70036005 ID=Msa0619030-mRNA-1:exon:20364;Parent=Msa0619030-mRNA-1
chr4_2 five_prime_UTR 70036103 70036239 70036103 ID=Msa0619030-mRNA-1:five_prime_utr;Parent=Msa0619030-mRNA-1
chr4_2 CDS 70036005 70036102 70036005 ID=Msa0619030-mRNA-1:cds;Parent=Msa0619030-mRNA-1
chr4_2 CDS 70035805 70035918 70035805 ID=Msa0619030-mRNA-1:cds;Parent=Msa0619030-mRNA-1
chr4_2 CDS 70033826 70034336 70033826 ID=Msa0619030-mRNA-1:cds;Parent=Msa0619030-mRNA-1
chr4_2 CDS 70033034 70033187 70033034 ID=Msa0619030-mRNA-1:cds;Parent=Msa0619030-mRNA-1
chr4_2 CDS 70032607 70032809 70032607 ID=Msa0619030-mRNA-1:cds;Parent=Msa0619030-mRNA-1
chr4_2 three_prime_UTR 70032269 70032606 70032269 ID=Msa0619030-mRNA-1:three_prime_utr;Parent=Msa0619030-mRNA-1
Gene Sequence

>Msa0619030

ATGGCGAAATCACCAGAAACCGAACTCCCACTCAAAGCCTTTGGTTGGGCTGCTAGAGACACTTCTGGCACCCTCTCTCCCTTTCATTTCTCTCGAAGGGAAAATGGTGATGATGATGTAAGTGTGAAAATTCTATATTGTGGAGTTTGTCATTCTGATCTACACACTCTCAAGAACGATTGGGGTTTCACTACTTACCCTGTTGTTCCTGGGCATGAAATTGTTGGCGTTGTGACAAAAGTTGGAATCAATGTGAAAAAATTCAGAGTGGGTGATAACGTTGGTGTTGGTGTAATTGTCGAGTCTTGTCAGACTTGTGAGAATTGCAATCAAGATTTGGAGCAGTACTGTCCTAAACCTGTATTTACCTATAACTCTCCTTATAAAGGGACACGAACCTATGGTGGCTATTCTGATTTTGTGGTTGTTCACCAGCGGTATGTAGTTCAGTTTCCTGACAACTTACCCCTTGACGCTGGTGCTCCACTTCTGTGTGCCGGGATCACCGTGTATAGCCCGATGAAGTATTATGGTATGACTGAACCAGGCAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAATTCGGTAAAGCATTTGGGCTGAAGGTTACTGTTATTAGTACCTCTCCAAACAAGGAAACTGAGGCCATTGACAAACTTGGTGCTGATTCTTTCCTTGTTTCCAAAGACCCTGAGAAAATGAAGGCTGCTATGGGAACCATGGACTACATCATAGACACAATATCTGCTGCTCATTCCCTGATGCCACTGCTTGGTCTACTGAAGTTGAATGGGAAACTGGTCACTGTAGGGTTGCCTAGCAAGCCCCTTGAGCTCTCTGTCTTTCCATTAGTTGCAGGACGGAAGCTTATCGGAGGGAGTAACATTGGAGGGATGAAAGAGACTCAGGAGATGCTCGATTTCTGCGGCAAGCACAACATAACTGCAGATATTGAGTTGATTAAGATGCATGAAATCAACACGGCCATGGAAAGGCTTCACAAAGCTGATGTGAAATATCGGTTTGTGATTGATGTGGCCAACTCCTTCTCAAGTTTGTAG

Protein sequence

>Msa0619030

MAKSPETELPLKAFGWAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNSPYKGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSSL*