AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1035050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1035050 MtrunA17_Chr7g0258321 97.015 469 6 3 1 466 1 464 0.0 935
Msa1035050 MtrunA17_Chr1g0174701 73.529 442 94 6 48 466 66 507 0.0 643
Msa1035050 MtrunA17_Chr8g0353501 52.591 386 157 8 87 464 98 465 1.60e-128 380
Msa1035050 MtrunA17_Chr7g0256211 61.111 306 106 5 164 465 156 452 3.83e-128 379
Msa1035050 MtrunA17_Chr2g0321431 55.932 295 116 2 171 465 189 469 2.22e-116 350
Msa1035050 MtrunA17_Chr4g0026401 54.072 307 120 4 159 465 176 461 1.18e-109 333
Msa1035050 MtrunA17_Chr5g0422771 51.456 309 140 3 160 465 163 464 2.50e-105 321
Msa1035050 MtrunA17_Chr3g0124601 49.686 318 153 2 148 465 51 361 3.11e-104 315
Msa1035050 MtrunA17_Chr1g0210151 48.910 321 152 4 146 465 31 340 1.20e-100 305
Msa1035050 MtrunA17_Chr5g0424861 44.315 343 175 5 122 462 19 347 9.64e-87 270
Msa1035050 MtrunA17_Chr8g0382861 45.425 306 159 3 160 465 59 356 1.45e-86 269
Msa1035050 MtrunA17_Chr3g0115371 44.248 339 171 6 128 463 24 347 1.59e-82 259
Msa1035050 MtrunA17_Chr5g0424851 42.920 226 124 2 238 462 1 222 2.62e-55 190
Msa1035050 MtrunA17_Chr5g0424851 42.056 214 120 1 240 453 217 426 1.04e-52 183
Msa1035050 MtrunA17_Chr3g0093451 47.059 187 84 4 155 335 32 209 2.98e-52 175
Msa1035050 MtrunA17_Chr1g0196951 30.392 204 115 6 260 458 59 240 1.09e-19 88.2
Msa1035050 MtrunA17_Chr7g0242651 25.561 223 142 4 248 455 6 219 7.25e-14 70.9
Msa1035050 MtrunA17_Chr2g0315631 22.927 205 150 2 255 454 8 209 4.17e-12 65.9
Msa1035050 MtrunA17_Chr8g0384821 21.849 238 155 4 246 452 10 247 4.25e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1035050 AT5G06839.3 59.637 441 137 10 64 466 22 459 1.95e-175 500
Msa1035050 AT5G06839.1 60.333 421 123 9 64 466 22 416 1.04e-172 491
Msa1035050 AT5G06839.2 59.953 422 124 9 64 466 22 417 6.76e-172 489
Msa1035050 AT1G08320.2 53.736 348 133 8 118 465 10 329 1.64e-123 364
Msa1035050 AT1G08320.5 53.736 348 133 8 118 465 10 329 1.64e-123 364
Msa1035050 AT1G08320.1 44.676 479 176 15 37 465 14 453 9.46e-122 364
Msa1035050 AT1G08320.4 44.676 479 176 15 37 465 14 453 9.46e-122 364
Msa1035050 AT1G08320.3 44.676 479 176 15 37 465 14 453 9.46e-122 364
Msa1035050 AT5G06950.2 53.746 307 133 2 161 465 31 330 5.13e-114 339
Msa1035050 AT5G06950.4 53.746 307 133 2 161 465 31 330 5.13e-114 339
Msa1035050 AT5G06950.1 53.746 307 133 2 161 465 31 330 5.13e-114 339
Msa1035050 AT5G06950.5 53.746 307 133 2 161 465 31 330 5.13e-114 339
Msa1035050 AT5G06950.3 53.746 307 133 2 161 465 31 330 5.13e-114 339
Msa1035050 AT3G12250.6 52.229 314 141 2 154 465 24 330 1.46e-113 338
Msa1035050 AT3G12250.2 52.229 314 141 2 154 465 24 330 1.46e-113 338
Msa1035050 AT3G12250.7 52.229 314 141 2 154 465 24 330 1.46e-113 338
Msa1035050 AT3G12250.1 52.229 314 141 2 154 465 24 330 1.46e-113 338
Msa1035050 AT3G12250.3 52.548 314 140 3 154 465 18 324 6.07e-113 336
Msa1035050 AT3G12250.4 51.212 330 149 4 138 465 36 355 9.69e-113 337
Msa1035050 AT3G12250.5 53.247 308 135 3 160 465 3 303 1.54e-112 334
Msa1035050 AT5G06960.3 55.442 294 122 3 174 465 24 310 8.69e-109 325
Msa1035050 AT5G06960.2 55.442 294 122 3 174 465 44 330 8.94e-109 325
Msa1035050 AT5G06960.1 55.442 294 122 3 174 465 44 330 8.94e-109 325
Msa1035050 AT1G68640.1 52.941 306 137 3 161 464 151 451 6.68e-105 320
Msa1035050 AT1G77920.1 49.836 305 137 2 161 465 78 366 2.70e-98 300
Msa1035050 AT5G10030.5 50.512 293 137 3 173 465 78 362 3.48e-98 300
Msa1035050 AT5G10030.3 50.512 293 137 3 173 465 78 362 3.48e-98 300
Msa1035050 AT5G10030.1 50.512 293 137 3 173 465 78 362 3.48e-98 300
Msa1035050 AT5G10030.4 50.512 293 137 3 173 465 78 362 3.48e-98 300
Msa1035050 AT5G10030.2 50.512 293 137 3 173 465 78 362 3.48e-98 300
Msa1035050 AT1G22070.1 51.299 308 138 5 161 465 84 382 1.63e-97 298
Msa1035050 AT5G65210.6 49.488 293 140 3 173 465 12 296 3.47e-95 290
Msa1035050 AT5G65210.5 47.302 315 155 4 154 465 60 366 1.12e-94 291
Msa1035050 AT5G65210.7 47.302 315 155 4 154 465 60 366 1.12e-94 291
Msa1035050 AT5G65210.3 47.302 315 155 4 154 465 60 366 1.12e-94 291
Msa1035050 AT5G65210.1 47.302 315 155 4 154 465 60 366 1.12e-94 291
Msa1035050 AT5G65210.2 47.302 315 155 4 154 465 60 366 1.12e-94 291
Msa1035050 AT5G65210.4 47.302 315 155 4 154 465 60 366 1.12e-94 291
Msa1035050 AT1G58330.1 27.273 231 139 5 244 455 3 223 2.68e-16 78.6

Find 101 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATATTTCATCTTGTTTC+TGG 0.146768 7_1:-70780525 Msa1035050:CDS
GTCCATTAAGATAGAGAAAA+AGG 0.218834 7_1:+70782573 None:intergenic
GATCATAATCAAATTTCTTT+TGG 0.221378 7_1:-70782814 Msa1035050:CDS
TAAACCTTCTGAACTCATTA+AGG 0.258020 7_1:-70780454 Msa1035050:intron
CAACAAATAATGGGCATATA+TGG 0.268804 7_1:-70779551 Msa1035050:CDS
AATGTTTGTGGACAAATTCT+TGG 0.284617 7_1:-70780595 Msa1035050:CDS
GTCCATGTAGTTGGTCATAT+TGG 0.290454 7_1:+70779421 None:intergenic
AGCTTATGATTTGGGTGAAT+TGG 0.294739 7_1:-70782603 Msa1035050:CDS
ATTGACCGAGCAACAAATAA+TGG 0.298535 7_1:-70779561 Msa1035050:CDS
GATTCGGGAGCTTATGATTT+GGG 0.302566 7_1:-70782611 Msa1035050:CDS
TGTACGTGCCTTAACAGCTT+TGG 0.332582 7_1:+70781692 None:intergenic
CACATGAAGCAACGTTCAAT+TGG 0.341843 7_1:+70780489 None:intergenic
TCCATGTAGTTGGTCATATT+GGG 0.346409 7_1:+70779422 None:intergenic
TATTAATTACACCTTAGAAT+TGG 0.350406 7_1:+70781861 None:intergenic
GTACGTGCCTTAACAGCTTT+GGG 0.362416 7_1:+70781693 None:intergenic
TGTTCATGGCCCTTGCCATT+TGG 0.365190 7_1:+70779399 None:intergenic
GCCATCATCGTCCAATTCTA+AGG 0.366357 7_1:-70781872 Msa1035050:intron
GGGTGGCTCTGATCCTCTCT+TGG 0.372781 7_1:+70781713 None:intergenic
TGCCATTTGGTCCATGTAGT+TGG 0.373834 7_1:+70779412 None:intergenic
TTCATCTTGTTTCTGGCATG+TGG 0.389553 7_1:-70780518 Msa1035050:CDS
TTTGGTGGAGGTGCAATGTT+GGG 0.390194 7_1:-70780845 Msa1035050:CDS
AGATTCGGGAGCTTATGATT+TGG 0.391428 7_1:-70782612 Msa1035050:CDS
TTGCTGATTGACGCGTCGTT+AGG 0.394258 7_1:+70776918 None:intergenic
AAGAGTGGAGAGTTTGTTCA+TGG 0.395292 7_1:+70779385 None:intergenic
AGTTGAGTAGTGGTTTGGTT+TGG 0.401033 7_1:+70782925 None:intergenic
GTTCTAGTTGAGTAGTGGTT+TGG 0.401946 7_1:+70782920 None:intergenic
ACATGAAGCAACGTTCAATT+GGG 0.406516 7_1:+70780490 None:intergenic
ATTATTTGTTGCTCGGTCAA+TGG 0.410343 7_1:+70779563 None:intergenic
GTCAGCAGAAATAAAGATTC+GGG 0.416098 7_1:-70782626 Msa1035050:intron
TCTTCATCACCCTCTGTCCT+TGG 0.418587 7_1:-70782778 Msa1035050:CDS
CTCTTGGATCCACTTGTTTG+CGG 0.419959 7_1:+70781729 None:intergenic
ATTTGATTATGATCATGTAT+TGG 0.421851 7_1:+70782823 None:intergenic
AGAGATCACACCTGAGCTAA+TGG 0.429073 7_1:+70780793 None:intergenic
GAGCTAATGGTATTCATAGA+AGG 0.438872 7_1:+70780806 None:intergenic
TGTCAGCAGAAATAAAGATT+CGG 0.439709 7_1:-70782627 Msa1035050:intron
TATGCCCATTATTTGTTGCT+CGG 0.446315 7_1:+70779556 None:intergenic
CTTTGGTGGAGGTGCAATGT+TGG 0.447414 7_1:-70780846 Msa1035050:CDS
GACCAACTACATGGACCAAA+TGG 0.454379 7_1:-70779414 Msa1035050:CDS
TGATGACGGTGTTGAGGTGG+TGG 0.456563 7_1:+70782892 None:intergenic
TTGACCGAGCAACAAATAAT+GGG 0.460762 7_1:-70779560 Msa1035050:CDS
TAGGGCATGTTCTTTGGTGG+AGG 0.462298 7_1:-70780857 Msa1035050:CDS
GATCTGATTCAGACGATGAA+TGG 0.463347 7_1:+70776940 None:intergenic
TCATGTTCAGAACTTGAAGT+TGG 0.464502 7_1:+70781417 None:intergenic
AAAGAGTTAACCTTAGGATC+TGG 0.468362 7_1:+70781381 None:intergenic
TCCACAGAAAATTCAACATC+AGG 0.468688 7_1:-70781946 Msa1035050:intron
TAAACTTAATCAGATGGAAC+AGG 0.470502 7_1:-70780984 Msa1035050:CDS
CTCTTAGTTCACATACTAAA+CGG 0.475671 7_1:+70780655 None:intergenic
CGTTGCTTCATGTGGATTGG+TGG 0.475727 7_1:-70780480 Msa1035050:CDS
GAATGAGCTTAGAATGTTTG+TGG 0.479362 7_1:-70780607 Msa1035050:CDS
CGGTGTTGAGGTGGTGGGAG+TGG 0.482044 7_1:+70782898 None:intergenic
ACCTTAGAATTGGACGATGA+TGG 0.485367 7_1:+70781871 None:intergenic
AACATTCTAAGCTCATTCTC+AGG 0.491670 7_1:+70780612 None:intergenic
ACCTAAAACACCAGATCCTA+AGG 0.513193 7_1:-70781391 Msa1035050:intron
CAATTGAACGTTGCTTCATG+TGG 0.518218 7_1:-70780488 Msa1035050:CDS
TCATCTTGTTTCTGGCATGT+GGG 0.519428 7_1:-70780517 Msa1035050:CDS
CAGAATTAAACTTAATCAGA+TGG 0.528140 7_1:-70780990 Msa1035050:CDS
GAACGTTGCTTCATGTGGAT+TGG 0.530260 7_1:-70780483 Msa1035050:CDS
GAGTGGTTCTAGTTGAGTAG+TGG 0.532015 7_1:+70782915 None:intergenic
GATTCAGACGATGAATGGTT+TGG 0.540713 7_1:+70776945 None:intergenic
TTTGGTCTTGAACACTGGAT+GGG 0.540777 7_1:+70782543 None:intergenic
GCTACCTTAATGAGTTCAGA+AGG 0.549582 7_1:+70780450 None:intergenic
TCCCAATATGACCAACTACA+TGG 0.555270 7_1:-70779423 Msa1035050:CDS
GAACTCACATGTAGTTTCCA+AGG 0.555892 7_1:+70782761 None:intergenic
GGAGAAGATGCTCTCTCTCA+AGG 0.558918 7_1:-70779506 Msa1035050:CDS
TGCTCTCTCTCAAGGACTTG+AGG 0.560629 7_1:-70779498 Msa1035050:CDS
AAAATTCAACATCAGGAATG+AGG 0.564641 7_1:-70781939 Msa1035050:CDS
AACTCAATGCTCGCATACGA+TGG 0.565611 7_1:+70776867 None:intergenic
TCTACATGCATAGGCTGAGA+AGG 0.566999 7_1:+70781895 None:intergenic
TCTATGAATACCATTAGCTC+AGG 0.570910 7_1:-70780803 Msa1035050:intron
TCTTGAAAGTTTCGTGAGAG+AGG 0.574448 7_1:-70779366 Msa1035050:intron
GCAATGTTGGGAGGAGAACA+AGG 0.577141 7_1:-70780833 Msa1035050:CDS
GGAATATGCGAGGTGGCTTG+AGG 0.581832 7_1:-70780685 Msa1035050:CDS
TTAGTTTCTCCGCAAACAAG+TGG 0.585262 7_1:-70781738 Msa1035050:CDS
GATGATGAATTTGATGATGA+CGG 0.596752 7_1:+70782878 None:intergenic
GATGATGGCTCTACATGCAT+AGG 0.601506 7_1:+70781886 None:intergenic
TGATGATGACGGTGTTGAGG+TGG 0.603280 7_1:+70782889 None:intergenic
GGTGGAGGTGCAATGTTGGG+AGG 0.609507 7_1:-70780842 Msa1035050:CDS
TCTCACGAAACTTTCAAGAG+TGG 0.621714 7_1:+70779370 None:intergenic
GCGAGCATTGAGTTCTCTGT+GGG 0.622812 7_1:-70776858 Msa1035050:CDS
TAATGGTATTCATAGAAGGA+AGG 0.626256 7_1:+70780810 None:intergenic
GATGACGGTGTTGAGGTGGT+GGG 0.626282 7_1:+70782893 None:intergenic
ACTACATGGACCAAATGGCA+AGG 0.628760 7_1:-70779409 Msa1035050:CDS
ATTTGATGATGACGGTGTTG+AGG 0.632863 7_1:+70782886 None:intergenic
ATGTAGTTTCCAAGGACAGA+GGG 0.634416 7_1:+70782769 None:intergenic
CATGAAGCAACGTTCAATTG+GGG 0.638346 7_1:+70780491 None:intergenic
ATGTAGTTGGTCATATTGGG+AGG 0.641383 7_1:+70779425 None:intergenic
TAACGACGCGTCAATCAGCA+AGG 0.644344 7_1:-70776916 Msa1035050:CDS
CAAACAAGTGGATCCAAGAG+AGG 0.644811 7_1:-70781726 Msa1035050:CDS
CGTGCCTTAACAGCTTTGGG+TGG 0.648085 7_1:+70781696 None:intergenic
AGCATTGAGTTCTCTGTGGG+TGG 0.652494 7_1:-70776855 Msa1035050:CDS
ACGATGGAAGTACTCAGCCA+TGG 0.660105 7_1:+70776883 None:intergenic
ACTTCAAGTTCTGAACATGA+AGG 0.660838 7_1:-70781414 Msa1035050:CDS
TGCGAGCATTGAGTTCTCTG+TGG 0.661165 7_1:-70776859 Msa1035050:CDS
CATGTAGTTTCCAAGGACAG+AGG 0.674553 7_1:+70782768 None:intergenic
CTACATGGACCAAATGGCAA+GGG 0.682858 7_1:-70779408 Msa1035050:CDS
TTGCAACAATCTACACAACA+AGG 0.684828 7_1:-70779527 Msa1035050:CDS
TGTTCGACGTGGAATATGCG+AGG 0.686245 7_1:-70780695 Msa1035050:CDS
AGAGGCTGCAATGTTCGACG+TGG 0.690011 7_1:-70780706 Msa1035050:CDS
ACTGAATGCTATTCTTGACG+CGG 0.733529 7_1:+70776827 None:intergenic
TCGACGTGGAATATGCGAGG+TGG 0.738111 7_1:-70780692 Msa1035050:CDS
TTAGTTCACATACTAAACGG+TGG 0.740777 7_1:+70780658 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATTAATTATTTTAT+AGG - chr7_1:70778009-70778028 Msa1035050:intron 0.0%
!!! TTTCTTTTTTTTTCTAAAAA+AGG - chr7_1:70777509-70777528 Msa1035050:intron 10.0%
!!! TTCTTTTTTTTTCTAAAAAA+GGG - chr7_1:70777510-70777529 Msa1035050:intron 10.0%
!! TAAACTATTAATTAACATAT+TGG + chr7_1:70778132-70778151 None:intergenic 10.0%
!!! TTACTTTTTTTTATTCTTTT+TGG - chr7_1:70778500-70778519 Msa1035050:intron 10.0%
!! ATTTCAAATATTTATATAAG+AGG + chr7_1:70779046-70779065 None:intergenic 10.0%
!!! ATATATATTTTTAAAGTGAT+TGG - chr7_1:70780959-70780978 Msa1035050:intron 10.0%
!! TCAAAAAAATAATAAGAGTT+TGG - chr7_1:70778192-70778211 Msa1035050:intron 15.0%
!!! TTTTTTACATTTTTTGTCAA+TGG - chr7_1:70778695-70778714 Msa1035050:intron 15.0%
!!! TTTATTGTTATTTCCATTTT+AGG - chr7_1:70778905-70778924 Msa1035050:intron 15.0%
!!! TTATTGTTATTTCCATTTTA+GGG - chr7_1:70778906-70778925 Msa1035050:intron 15.0%
!! ATTTCTTAATCAATGTTATA+AGG + chr7_1:70779747-70779766 None:intergenic 15.0%
!! CTTATTGTTAATGAAATTAT+GGG - chr7_1:70779839-70779858 Msa1035050:intron 15.0%
!!! ATTTTTTTTTAGATGACAAA+AGG + chr7_1:70780552-70780571 None:intergenic 15.0%
!!! TGTATATATTAGTGATTTTT+AGG - chr7_1:70780647-70780666 Msa1035050:CDS 15.0%
!!! AATTTTCTTTGTGAAATTTA+TGG - chr7_1:70781495-70781514 Msa1035050:intron 15.0%
!!! AAAATTTTGTTTGTTAACTA+TGG - chr7_1:70781678-70781697 Msa1035050:intron 15.0%
!!! AAATTTTGTTTGTTAACTAT+GGG - chr7_1:70781679-70781698 Msa1035050:intron 15.0%
!! ATCATTATCATTAGTATATA+TGG + chr7_1:70781932-70781951 None:intergenic 15.0%
!! CAAGAATAATAAATAGTTAT+AGG + chr7_1:70782334-70782353 None:intergenic 15.0%
!!! TTTATTATTCTTGTTTTCAA+AGG - chr7_1:70782341-70782360 Msa1035050:intron 15.0%
!! GTTTAAAAAAAGAAAATAAC+CGG - chr7_1:70782769-70782788 Msa1035050:CDS 15.0%
!! ATTTGATTATGATCATGTAT+TGG + chr7_1:70776961-70776980 None:intergenic 20.0%
!!! GATCATAATCAAATTTCTTT+TGG - chr7_1:70776967-70776986 Msa1035050:intron 20.0%
!!! AAAAAAAAAACTCACGTTTT+TGG + chr7_1:70777259-70777278 None:intergenic 20.0%
!! AATGATAGAATGAATAAAGA+GGG + chr7_1:70777709-70777728 None:intergenic 20.0%
!! AAATGATAGAATGAATAAAG+AGG + chr7_1:70777710-70777729 None:intergenic 20.0%
!! TATTAATTACACCTTAGAAT+TGG + chr7_1:70777923-70777942 None:intergenic 20.0%
!! TTTGTTACACTTCATATTAA+TGG - chr7_1:70777985-70778004 Msa1035050:intron 20.0%
!! AAGAAACAATTATAAGAGTT+TGG - chr7_1:70778165-70778184 Msa1035050:intron 20.0%
!! ATAAAATGTGGATATGAAAT+GGG + chr7_1:70778472-70778491 None:intergenic 20.0%
!! TAAAAAACACAACACAAATA+TGG + chr7_1:70778682-70778701 None:intergenic 20.0%
!!! TTTTATTTGTACTCTTTTTC+AGG - chr7_1:70778743-70778762 Msa1035050:intron 20.0%
!! AAACAAGAAAAATATCTTCA+TGG - chr7_1:70778849-70778868 Msa1035050:intron 20.0%
!! TGATTAAACATGCATTATAA+GGG + chr7_1:70779017-70779036 None:intergenic 20.0%
!! TTGATTAAACATGCATTATA+AGG + chr7_1:70779018-70779037 None:intergenic 20.0%
!!! ATTTGAAATGAATATTTCAG+AGG - chr7_1:70779057-70779076 Msa1035050:intron 20.0%
!! TGTTAAATAATGTTAAGTCA+TGG + chr7_1:70779398-70779417 None:intergenic 20.0%
!!! ATAATTTTTATGCGAAGAAT+AGG - chr7_1:70779502-70779521 Msa1035050:CDS 20.0%
!!! TAATTTTTATGCGAAGAATA+GGG - chr7_1:70779503-70779522 Msa1035050:CDS 20.0%
!! ATTCATAAACTTTGTATTGT+CGG - chr7_1:70779580-70779599 Msa1035050:CDS 20.0%
!! TTAATCAATGTTATAAGGTA+TGG + chr7_1:70779742-70779761 None:intergenic 20.0%
!! CCATAATTTCATTAACAATA+AGG + chr7_1:70779841-70779860 None:intergenic 20.0%
!! CCTTATTGTTAATGAAATTA+TGG - chr7_1:70779838-70779857 Msa1035050:intron 20.0%
!! TTCAATACTAATACTATAAG+CGG + chr7_1:70779982-70780001 None:intergenic 20.0%
!! TTGTTGAATTCAATGTTATA+AGG - chr7_1:70780066-70780085 Msa1035050:intron 20.0%
!! AGAAACATAAAAATCACATT+TGG + chr7_1:70780159-70780178 None:intergenic 20.0%
!! AAATAATAGTATTTGCGAAT+AGG - chr7_1:70780480-70780499 Msa1035050:CDS 20.0%
!! CATATAGATATTGTTAATCA+TGG - chr7_1:70780603-70780622 Msa1035050:CDS 20.0%
!!! TATATTAGTGATTTTTAGGA+TGG - chr7_1:70780651-70780670 Msa1035050:CDS 20.0%
!! AAATTCAAAAAGGATGTTAT+GGG + chr7_1:70781277-70781296 None:intergenic 20.0%
!! AAAATTCAAAAAGGATGTTA+TGG + chr7_1:70781278-70781297 None:intergenic 20.0%
!!! CTTTTAGTCAAAATTCAAAA+AGG + chr7_1:70781287-70781306 None:intergenic 20.0%
!!! ATTTTGACTAAAAGTACAAA+CGG - chr7_1:70781293-70781312 Msa1035050:intron 20.0%
!! TAGAAGAAAACAAAATGATA+TGG + chr7_1:70781399-70781418 None:intergenic 20.0%
!!! ATATCATTTTGTTTTCTTCT+AGG - chr7_1:70781398-70781417 Msa1035050:CDS 20.0%
!! AAAAAAATCACACTATATTG+TGG + chr7_1:70781541-70781560 None:intergenic 20.0%
!!! AATTTTGTATATTTGCTTGT+GGG + chr7_1:70781664-70781683 None:intergenic 20.0%
!!! AAATTTTGTATATTTGCTTG+TGG + chr7_1:70781665-70781684 None:intergenic 20.0%
!! TTCATTAACAATTCTTGAAA+TGG - chr7_1:70781707-70781726 Msa1035050:CDS 20.0%
!! CAAATTAACACATATGATAT+TGG + chr7_1:70781747-70781766 None:intergenic 20.0%
!! TAGATTCAAAGATGTATAAT+TGG + chr7_1:70781849-70781868 None:intergenic 20.0%
!! GTTATAGATAACCAAAATTT+CGG - chr7_1:70782268-70782287 Msa1035050:intron 20.0%
!!! TATTTTTTTAGACGATTCAA+CGG - chr7_1:70782715-70782734 Msa1035050:intron 20.0%
! TGTCTTACGTTAAGAAAAAT+TGG - chr7_1:70777096-70777115 Msa1035050:intron 25.0%
! TCCATTAAGATAGAGAAAAA+GGG + chr7_1:70777210-70777229 None:intergenic 25.0%
! ATTTCAAGCAAAACGTTATT+GGG + chr7_1:70777293-70777312 None:intergenic 25.0%
! AATTTCAAGCAAAACGTTAT+TGG + chr7_1:70777294-70777313 None:intergenic 25.0%
! TTGCTTGAAATTCAAAAAGA+AGG - chr7_1:70777302-70777321 Msa1035050:intron 25.0%
! TATAACAAACCAAAAGTGAA+AGG + chr7_1:70777336-70777355 None:intergenic 25.0%
! AAATATTTACAAGAGAAGAG+AGG - chr7_1:70777603-70777622 Msa1035050:intron 25.0%
! CTATTTAATGTTGCTGAATT+TGG - chr7_1:70777798-70777817 Msa1035050:intron 25.0%
!!! AATTATTTTATAGGCTAGCA+TGG - chr7_1:70778018-70778037 Msa1035050:intron 25.0%
! AAGATTAAAGAGTTAACCTT+AGG + chr7_1:70778409-70778428 None:intergenic 25.0%
! TAAAATGTGGATATGAAATG+GGG + chr7_1:70778471-70778490 None:intergenic 25.0%
! GATAAAATGTGGATATGAAA+TGG + chr7_1:70778473-70778492 None:intergenic 25.0%
! GTAACAAGATTGATAAAATG+TGG + chr7_1:70778484-70778503 None:intergenic 25.0%
! CAGAATTAAACTTAATCAGA+TGG - chr7_1:70778791-70778810 Msa1035050:intron 25.0%
!! GATATATTTCATCTTGTTTC+TGG - chr7_1:70779256-70779275 Msa1035050:intron 25.0%
! TTGCAATATTAGTTGAACTT+TGG - chr7_1:70779468-70779487 Msa1035050:CDS 25.0%
! TAACGTTATAGTCATTCAAA+AGG - chr7_1:70779538-70779557 Msa1035050:CDS 25.0%
!!! GCTCTTCTTTTTTATTTCTT+TGG + chr7_1:70779618-70779637 None:intergenic 25.0%
!! TGAAGATTTTCCATATTGTA+CGG - chr7_1:70779689-70779708 Msa1035050:intron 25.0%
! TCAATACTAATACTATAAGC+GGG + chr7_1:70779981-70780000 None:intergenic 25.0%
! AACTAACTTAAAGAGATAGA+TGG + chr7_1:70780855-70780874 None:intergenic 25.0%
!! ATCTCTTTAAGTTAGTTACA+TGG - chr7_1:70780858-70780877 Msa1035050:intron 25.0%
! TTCACATTGATGAATTTCTA+AGG - chr7_1:70781091-70781110 Msa1035050:intron 25.0%
! TTAATTAGGATTGTATCAGT+GGG + chr7_1:70781171-70781190 None:intergenic 25.0%
! TTTAATTAGGATTGTATCAG+TGG + chr7_1:70781172-70781191 None:intergenic 25.0%
!!! AGGGATAGTATCTTTTAATT+AGG + chr7_1:70781185-70781204 None:intergenic 25.0%
! AATTCAAAAAGGATGTTATG+GGG + chr7_1:70781276-70781295 None:intergenic 25.0%
!! CTCATGTCTAATATGATTTT+TGG - chr7_1:70781329-70781348 Msa1035050:intron 25.0%
!! GCAAGATTTTTGAATCAAAT+TGG - chr7_1:70781373-70781392 Msa1035050:intron 25.0%
!!! ATCAAAATATCGACTGATTT+TGG - chr7_1:70781422-70781441 Msa1035050:CDS 25.0%
!!! TTGAATTAAGTTGAAAGCAA+TGG - chr7_1:70781461-70781480 Msa1035050:intron 25.0%
! ATATAGACATTGATAGAAGT+CGG + chr7_1:70781798-70781817 None:intergenic 25.0%
! ATCAATGTCTATATTAGTAG+CGG - chr7_1:70781804-70781823 Msa1035050:intron 25.0%
! AAGCTAGAGGAATATTAATT+AGG - chr7_1:70781902-70781921 Msa1035050:CDS 25.0%
!! TAGGTTTTCTTAGTCAAATT+TGG + chr7_1:70782302-70782321 None:intergenic 25.0%
! TAGTTATAGGAACATGATAT+AGG + chr7_1:70782321-70782340 None:intergenic 25.0%
! TTAGTATGAACAGTATTATC+TGG + chr7_1:70782741-70782760 None:intergenic 25.0%
! TCAATTCAAATCACAATTAC+CGG + chr7_1:70782791-70782810 None:intergenic 25.0%
!! GATGATGAATTTGATGATGA+CGG + chr7_1:70776906-70776925 None:intergenic 30.0%
TGTCAGCAGAAATAAAGATT+CGG - chr7_1:70777154-70777173 Msa1035050:intron 30.0%
GTCCATTAAGATAGAGAAAA+AGG + chr7_1:70777211-70777230 None:intergenic 30.0%
! AACCAAAAGTGTGGAAAAAA+TGG - chr7_1:70777455-70777474 Msa1035050:intron 30.0%
!!! TTCCATTTTTTCCACACTTT+TGG + chr7_1:70777460-70777479 None:intergenic 30.0%
!! AAAGAGGGTCTATTTTTCAA+AGG + chr7_1:70777694-70777713 None:intergenic 30.0%
AAAATTCAACATCAGGAATG+AGG - chr7_1:70777842-70777861 Msa1035050:intron 30.0%
CTATAGTATAGTAAACGCAT+AGG + chr7_1:70778317-70778336 None:intergenic 30.0%
TAAACTTAATCAGATGGAAC+AGG - chr7_1:70778797-70778816 Msa1035050:intron 30.0%
GTAACCTAAAATGCAATAAC+TGG - chr7_1:70778871-70778890 Msa1035050:intron 30.0%
! ATGTCCAGTTATTGCATTTT+AGG + chr7_1:70778878-70778897 None:intergenic 30.0%
TAATGGTATTCATAGAAGGA+AGG + chr7_1:70778974-70778993 None:intergenic 30.0%
CTCTTAGTTCACATACTAAA+CGG + chr7_1:70779129-70779148 None:intergenic 30.0%
AATGTTTGTGGACAAATTCT+TGG - chr7_1:70779186-70779205 Msa1035050:intron 30.0%
TAAACCTTCTGAACTCATTA+AGG - chr7_1:70779327-70779346 Msa1035050:intron 30.0%
ACACTATTCTAAGTAACCAA+AGG - chr7_1:70779357-70779376 Msa1035050:intron 30.0%
ATAAACTTTGTATTGTCGGT+GGG - chr7_1:70779584-70779603 Msa1035050:CDS 30.0%
CTACAATAGAAAAGAGAGAT+GGG + chr7_1:70779886-70779905 None:intergenic 30.0%
ACTACAATAGAAAAGAGAGA+TGG + chr7_1:70779887-70779906 None:intergenic 30.0%
GTTATAAGGAGAACTATAAG+TGG - chr7_1:70780080-70780099 Msa1035050:intron 30.0%
!! CAACAAATAATGGGCATATA+TGG - chr7_1:70780230-70780249 Msa1035050:intron 30.0%
CATGTCAAATAGTCAAAGTA+AGG + chr7_1:70780448-70780467 None:intergenic 30.0%
TTAATCATGGACGTTGAATT+TGG - chr7_1:70780616-70780635 Msa1035050:CDS 30.0%
!!! ATCATGGTTGATTAGTTTTG+TGG - chr7_1:70780696-70780715 Msa1035050:CDS 30.0%
ATGAAAACTTTGTCAAGTCA+TGG + chr7_1:70780736-70780755 None:intergenic 30.0%
!! AGTTTTCATAACTGATTTCG+TGG - chr7_1:70780747-70780766 Msa1035050:intron 30.0%
!! GTTTTCATAACTGATTTCGT+GGG - chr7_1:70780748-70780767 Msa1035050:intron 30.0%
!! TTTTCATAACTGATTTCGTG+GGG - chr7_1:70780749-70780768 Msa1035050:intron 30.0%
AACTTAAAGAGATAGATGGA+TGG + chr7_1:70780851-70780870 None:intergenic 30.0%
!! ATAGCAAAGGTACCATAATA+AGG - chr7_1:70781018-70781037 Msa1035050:CDS 30.0%
ATAGCTAGGAAACCTTATTA+TGG + chr7_1:70781033-70781052 None:intergenic 30.0%
AATAAGGTTTCCTAGCTATA+AGG - chr7_1:70781034-70781053 Msa1035050:intron 30.0%
CACGTGAAAGTTAATATTAG+TGG - chr7_1:70781144-70781163 Msa1035050:intron 30.0%
AATTCTTGAAATGGTAACCT+AGG - chr7_1:70781716-70781735 Msa1035050:CDS 30.0%
TAACACATATGATATTGGTG+AGG + chr7_1:70781742-70781761 None:intergenic 30.0%
ATCTATTGTAAGTAACCGAT+CGG - chr7_1:70781864-70781883 Msa1035050:intron 30.0%
CAAGGACAAATACTACAAAT+TGG + chr7_1:70782012-70782031 None:intergenic 30.0%
TTTGTAGTATTTGTCCTTGT+TGG - chr7_1:70782013-70782032 Msa1035050:intron 30.0%
!! GATTTTTCAAAGTACGTAAG+GGG + chr7_1:70782209-70782228 None:intergenic 30.0%
!! CGATTTTTCAAAGTACGTAA+GGG + chr7_1:70782210-70782229 None:intergenic 30.0%
!! ACGATTTTTCAAAGTACGTA+AGG + chr7_1:70782211-70782230 None:intergenic 30.0%
!!! TCTTGTTTTCAAAGGTAGAA+AGG - chr7_1:70782349-70782368 Msa1035050:intron 30.0%
!! CTTGTTTTCAAAGGTAGAAA+GGG - chr7_1:70782350-70782369 Msa1035050:intron 30.0%
ACAATGTATATGTTTGTGTG+TGG + chr7_1:70782493-70782512 None:intergenic 30.0%
ATTATGTGTACTTATCCTCT+AGG - chr7_1:70782544-70782563 Msa1035050:CDS 30.0%
TTATGTGTACTTATCCTCTA+GGG - chr7_1:70782545-70782564 Msa1035050:CDS 30.0%
! TGAGTCAACTCTATATTTTG+CGG + chr7_1:70782675-70782694 None:intergenic 30.0%
GTGATTTGAATTGAACTTAC+AGG - chr7_1:70782797-70782816 Msa1035050:CDS 30.0%
!!! TTGGTTTGGTTTTTCAACAC+TGG + chr7_1:70776845-70776864 None:intergenic 35.0%
GTCAGCAGAAATAAAGATTC+GGG - chr7_1:70777155-70777174 Msa1035050:intron 35.0%
! AGCTTATGATTTGGGTGAAT+TGG - chr7_1:70777178-70777197 Msa1035050:intron 35.0%
! GCCCTTTTTCTCTATCTTAA+TGG - chr7_1:70777206-70777225 Msa1035050:intron 35.0%
AAACGTTATTGGGATTTGGA+AGG + chr7_1:70777283-70777302 None:intergenic 35.0%
AGCAAAACGTTATTGGGATT+TGG + chr7_1:70777287-70777306 None:intergenic 35.0%
! GACTCTTTTCCTTTCACTTT+TGG - chr7_1:70777324-70777343 Msa1035050:intron 35.0%
!! TGTTTTGCTTTTCTGCAGAA+AGG + chr7_1:70777435-70777454 None:intergenic 35.0%
AGCAAAACAAACCAAAAGTG+TGG - chr7_1:70777446-70777465 Msa1035050:intron 35.0%
TCCACAGAAAATTCAACATC+AGG - chr7_1:70777835-70777854 Msa1035050:intron 35.0%
! TCCTGATGTTGAATTTTCTG+TGG + chr7_1:70777839-70777858 None:intergenic 35.0%
GAAGGAAAAATGTTGAGAGT+TGG + chr7_1:70777871-70777890 None:intergenic 35.0%
GCATAGGTAGGTGATTAATT+AGG + chr7_1:70778301-70778320 None:intergenic 35.0%
AGTATAGTAAACGCATAGGT+AGG + chr7_1:70778313-70778332 None:intergenic 35.0%
TCATGTTCAGAACTTGAAGT+TGG + chr7_1:70778367-70778386 None:intergenic 35.0%
!! ACTTCAAGTTCTGAACATGA+AGG - chr7_1:70778367-70778386 Msa1035050:intron 35.0%
AAAGAGTTAACCTTAGGATC+TGG + chr7_1:70778403-70778422 None:intergenic 35.0%
AAAAAGCAGGCTTAGGAAAA+AGG - chr7_1:70778622-70778641 Msa1035050:intron 35.0%
AGGCTTAGGAAAAAGGTAAA+TGG - chr7_1:70778629-70778648 Msa1035050:intron 35.0%
GAGCTAATGGTATTCATAGA+AGG + chr7_1:70778978-70778997 None:intergenic 35.0%
TCTATGAATACCATTAGCTC+AGG - chr7_1:70778978-70778997 Msa1035050:intron 35.0%
TTAGTTCACATACTAAACGG+TGG + chr7_1:70779126-70779145 None:intergenic 35.0%
AACATTCTAAGCTCATTCTC+AGG + chr7_1:70779172-70779191 None:intergenic 35.0%
GAATGAGCTTAGAATGTTTG+TGG - chr7_1:70779174-70779193 Msa1035050:intron 35.0%
ACATGAAGCAACGTTCAATT+GGG + chr7_1:70779294-70779313 None:intergenic 35.0%
! TTTTTATGCGAAGAATAGGG+AGG - chr7_1:70779506-70779525 Msa1035050:CDS 35.0%
! TTTTATGCGAAGAATAGGGA+GGG - chr7_1:70779507-70779526 Msa1035050:CDS 35.0%
CATAAACTTTGTATTGTCGG+TGG - chr7_1:70779583-70779602 Msa1035050:CDS 35.0%
TAAACTTTGTATTGTCGGTG+GGG - chr7_1:70779585-70779604 Msa1035050:CDS 35.0%
ATACTATAAGCGGGAAAGTA+TGG + chr7_1:70779972-70779991 None:intergenic 35.0%
! ATTATTTGTTGCTCGGTCAA+TGG + chr7_1:70780221-70780240 None:intergenic 35.0%
ATTGACCGAGCAACAAATAA+TGG - chr7_1:70780220-70780239 Msa1035050:intron 35.0%
TTGACCGAGCAACAAATAAT+GGG - chr7_1:70780221-70780240 Msa1035050:intron 35.0%
! TATGCCCATTATTTGTTGCT+CGG + chr7_1:70780228-70780247 None:intergenic 35.0%
TTGCAACAATCTACACAACA+AGG - chr7_1:70780254-70780273 Msa1035050:intron 35.0%
TCCATGTAGTTGGTCATATT+GGG + chr7_1:70780362-70780381 None:intergenic 35.0%
! TTTCATAACTGATTTCGTGG+GGG - chr7_1:70780750-70780769 Msa1035050:intron 35.0%
AAGAAGAATCTGTTGTCCTT+GGG - chr7_1:70780787-70780806 Msa1035050:intron 35.0%
TAAAGAGATAGATGGATGGA+AGG + chr7_1:70780847-70780866 None:intergenic 35.0%
GAGAGTTAGTTAGTACACAT+AGG - chr7_1:70780985-70781004 Msa1035050:CDS 35.0%
TTCCTAGCTATAAGGTTATG+AGG - chr7_1:70781042-70781061 Msa1035050:intron 35.0%
ATCCTCATAACCTTATAGCT+AGG + chr7_1:70781047-70781066 None:intergenic 35.0%
CATGACATCACATAGATATG+GGG + chr7_1:70781212-70781231 None:intergenic 35.0%
CCATGACATCACATAGATAT+GGG + chr7_1:70781213-70781232 None:intergenic 35.0%
ACCATGACATCACATAGATA+TGG + chr7_1:70781214-70781233 None:intergenic 35.0%
AAAAAGGATGTTATGGGGAA+GGG + chr7_1:70781271-70781290 None:intergenic 35.0%
CAAATTGGTCAAACTATGAC+TGG + chr7_1:70781997-70782016 None:intergenic 35.0%
CACTAGCACTTCAACATATA+AGG + chr7_1:70782249-70782268 None:intergenic 35.0%
! TGGAACGTTAACCGAAATTT+TGG + chr7_1:70782282-70782301 None:intergenic 35.0%
CAGTTGAATCTACAAGCAAA+AGG - chr7_1:70782448-70782467 Msa1035050:intron 35.0%
TTGAATCTACAAGCAAAAGG+TGG - chr7_1:70782451-70782470 Msa1035050:intron 35.0%
ATGTATATGTTTGTGTGTGG+AGG + chr7_1:70782490-70782509 None:intergenic 35.0%
!! ACCACAATTTGACTTGATCA+GGG + chr7_1:70782578-70782597 None:intergenic 35.0%
!! AACCACAATTTGACTTGATC+AGG + chr7_1:70782579-70782598 None:intergenic 35.0%
TGATCAAGTCAAATTGTGGT+TGG - chr7_1:70782578-70782597 Msa1035050:CDS 35.0%
TTATCGATCACTGTAGTGAT+AGG - chr7_1:70782620-70782639 Msa1035050:CDS 35.0%
!! AGTTGAGTAGTGGTTTGGTT+TGG + chr7_1:70776859-70776878 None:intergenic 40.0%
! GTTCTAGTTGAGTAGTGGTT+TGG + chr7_1:70776864-70776883 None:intergenic 40.0%
!! ATTTGATGATGACGGTGTTG+AGG + chr7_1:70776898-70776917 None:intergenic 40.0%
! GGATGATGATGATGATGTTG+TGG + chr7_1:70776940-70776959 None:intergenic 40.0%
ATGTAGTTTCCAAGGACAGA+GGG + chr7_1:70777015-70777034 None:intergenic 40.0%
GAACTCACATGTAGTTTCCA+AGG + chr7_1:70777023-70777042 None:intergenic 40.0%
AGATTCGGGAGCTTATGATT+TGG - chr7_1:70777169-70777188 Msa1035050:intron 40.0%
GATTCGGGAGCTTATGATTT+GGG - chr7_1:70777170-70777189 Msa1035050:intron 40.0%
!! TTTGGTCTTGAACACTGGAT+GGG + chr7_1:70777241-70777260 None:intergenic 40.0%
!!! TTTTGGTCTTGAACACTGGA+TGG + chr7_1:70777242-70777261 None:intergenic 40.0%
!!! ACGTTTTTGGTCTTGAACAC+TGG + chr7_1:70777246-70777265 None:intergenic 40.0%
GATTCTGCTGAACATGCTAT+TGG + chr7_1:70777379-70777398 None:intergenic 40.0%
GGAAAAATGTTGAGAGTTGG+TGG + chr7_1:70777868-70777887 None:intergenic 40.0%
ACCTTAGAATTGGACGATGA+TGG + chr7_1:70777913-70777932 None:intergenic 40.0%
TTAGTTTCTCCGCAAACAAG+TGG - chr7_1:70778043-70778062 Msa1035050:intron 40.0%
TAGCAGCGAGAGAAAAATCA+TGG - chr7_1:70778334-70778353 Msa1035050:intron 40.0%
CGAGAGAAAAATCATGGCAA+GGG - chr7_1:70778340-70778359 Msa1035050:intron 40.0%
ACCTAAAACACCAGATCCTA+AGG - chr7_1:70778390-70778409 Msa1035050:intron 40.0%
! ACCTTAGGATCTGGTGTTTT+AGG + chr7_1:70778394-70778413 None:intergenic 40.0%
CCAAAGAACATGCCCTAAAA+TGG + chr7_1:70778921-70778940 None:intergenic 40.0%
!!! CCATTTTAGGGCATGTTCTT+TGG - chr7_1:70778918-70778937 Msa1035050:intron 40.0%
!!! TTTTAGGGCATGTTCTTTGG+TGG - chr7_1:70778921-70778940 Msa1035050:intron 40.0%
!! TTCATCTTGTTTCTGGCATG+TGG - chr7_1:70779263-70779282 Msa1035050:intron 40.0%
!! TCATCTTGTTTCTGGCATGT+GGG - chr7_1:70779264-70779283 Msa1035050:intron 40.0%
CATGAAGCAACGTTCAATTG+GGG + chr7_1:70779293-70779312 None:intergenic 40.0%
CACATGAAGCAACGTTCAAT+TGG + chr7_1:70779295-70779314 None:intergenic 40.0%
CAATTGAACGTTGCTTCATG+TGG - chr7_1:70779293-70779312 Msa1035050:intron 40.0%
GCTACCTTAATGAGTTCAGA+AGG + chr7_1:70779334-70779353 None:intergenic 40.0%
GCATGAATGACATGAACCTT+TGG + chr7_1:70779376-70779395 None:intergenic 40.0%
CCTAACTCTACCGTACAATA+TGG + chr7_1:70779702-70779721 None:intergenic 40.0%
CCATATTGTACGGTAGAGTT+AGG - chr7_1:70779699-70779718 Msa1035050:intron 40.0%
ATGTAGTTGGTCATATTGGG+AGG + chr7_1:70780359-70780378 None:intergenic 40.0%
TCCCAATATGACCAACTACA+TGG - chr7_1:70780358-70780377 Msa1035050:intron 40.0%
GTCCATGTAGTTGGTCATAT+TGG + chr7_1:70780363-70780382 None:intergenic 40.0%
! AAGAGTGGAGAGTTTGTTCA+TGG + chr7_1:70780399-70780418 None:intergenic 40.0%
TCTCACGAAACTTTCAAGAG+TGG + chr7_1:70780414-70780433 None:intergenic 40.0%
TCTTGAAAGTTTCGTGAGAG+AGG - chr7_1:70780415-70780434 Msa1035050:intron 40.0%
GCGACATGCTATCTATATCA+TGG - chr7_1:70780680-70780699 Msa1035050:CDS 40.0%
!! AGTTTTGTGGTCCCTCTATA+AGG - chr7_1:70780709-70780728 Msa1035050:intron 40.0%
! GTTTTGTGGTCCCTCTATAA+GGG - chr7_1:70780710-70780729 Msa1035050:intron 40.0%
GAAGAAGAATCTGTTGTCCT+TGG - chr7_1:70780786-70780805 Msa1035050:intron 40.0%
! AGGCGTAAAAAGCATAGCAA+AGG - chr7_1:70781005-70781024 Msa1035050:CDS 40.0%
CCCATATCTATGTGATGTCA+TGG - chr7_1:70781210-70781229 Msa1035050:intron 40.0%
AGTGCTGTCTTCAAGTCAAA+CGG + chr7_1:70781242-70781261 None:intergenic 40.0%
CAAAAAGGATGTTATGGGGA+AGG + chr7_1:70781272-70781291 None:intergenic 40.0%
TCACACTATATTGTGGTAGC+TGG + chr7_1:70781534-70781553 None:intergenic 40.0%
ATATGATATTGGTGAGGCCT+AGG + chr7_1:70781736-70781755 None:intergenic 40.0%
! AGAAGTCGGTGAACAACTTT+TGG + chr7_1:70781784-70781803 None:intergenic 40.0%
TAAGTAACCGATCGGAACAA+TGG - chr7_1:70781872-70781891 Msa1035050:intron 40.0%
AAGTAACCGATCGGAACAAT+GGG - chr7_1:70781873-70781892 Msa1035050:CDS 40.0%
TTGTTTCCCATTGTTCCGAT+CGG + chr7_1:70781882-70781901 None:intergenic 40.0%
CAATGGGAAACAAAAGCTAG+AGG - chr7_1:70781889-70781908 Msa1035050:CDS 40.0%
GTGTGACTAAAAGTCCAACA+AGG + chr7_1:70782030-70782049 None:intergenic 40.0%
AGACACAGACAAAAAGAGGT+TGG + chr7_1:70782404-70782423 None:intergenic 40.0%
GCAAAGACACAGACAAAAAG+AGG + chr7_1:70782408-70782427 None:intergenic 40.0%
!! CAATTTGACTTGATCAGGGA+TGG + chr7_1:70782574-70782593 None:intergenic 40.0%
TCCCTGATCAAGTCAAATTG+TGG - chr7_1:70782574-70782593 Msa1035050:CDS 40.0%
GATTCAGACGATGAATGGTT+TGG + chr7_1:70782839-70782858 None:intergenic 40.0%
GATCTGATTCAGACGATGAA+TGG + chr7_1:70782844-70782863 None:intergenic 40.0%
!! GAGTGGTTCTAGTTGAGTAG+TGG + chr7_1:70776869-70776888 None:intergenic 45.0%
CATGTAGTTTCCAAGGACAG+AGG + chr7_1:70777016-70777035 None:intergenic 45.0%
AGCAGAATCATATCTGCAGC+AGG - chr7_1:70777390-70777409 Msa1035050:intron 45.0%
GCAGAATCATATCTGCAGCA+GGG - chr7_1:70777391-70777410 Msa1035050:intron 45.0%
TGCAGAAAGGATCTGGTCAA+AGG + chr7_1:70777422-70777441 None:intergenic 45.0%
! GCTTTTCTGCAGAAAGGATC+TGG + chr7_1:70777429-70777448 None:intergenic 45.0%
TCTACATGCATAGGCTGAGA+AGG + chr7_1:70777889-70777908 None:intergenic 45.0%
! GATGATGGCTCTACATGCAT+AGG + chr7_1:70777898-70777917 None:intergenic 45.0%
GCCATCATCGTCCAATTCTA+AGG - chr7_1:70777909-70777928 Msa1035050:intron 45.0%
CTCTTGGATCCACTTGTTTG+CGG + chr7_1:70778055-70778074 None:intergenic 45.0%
CAAACAAGTGGATCCAAGAG+AGG - chr7_1:70778055-70778074 Msa1035050:intron 45.0%
GTACGTGCCTTAACAGCTTT+GGG + chr7_1:70778091-70778110 None:intergenic 45.0%
TGTACGTGCCTTAACAGCTT+TGG + chr7_1:70778092-70778111 None:intergenic 45.0%
GCGAGAGAAAAATCATGGCA+AGG - chr7_1:70778339-70778358 Msa1035050:intron 45.0%
GAGAAGCAGCTAGAAAAAGC+AGG - chr7_1:70778609-70778628 Msa1035050:intron 45.0%
CAGCTAGAAAAAGCAGGCTT+AGG - chr7_1:70778615-70778634 Msa1035050:intron 45.0%
! TTTGGTGGAGGTGCAATGTT+GGG - chr7_1:70778936-70778955 Msa1035050:intron 45.0%
AGAGATCACACCTGAGCTAA+TGG + chr7_1:70778991-70779010 None:intergenic 45.0%
GAACGTTGCTTCATGTGGAT+TGG - chr7_1:70779298-70779317 Msa1035050:intron 45.0%
CATGCTTTGTGACTTACGAG+AGG + chr7_1:70779930-70779949 None:intergenic 45.0%
CTCTCGTAAGTCACAAAGCA+TGG - chr7_1:70779928-70779947 Msa1035050:intron 45.0%
GACCAACTACATGGACCAAA+TGG - chr7_1:70780367-70780386 Msa1035050:intron 45.0%
! TGCCATTTGGTCCATGTAGT+TGG + chr7_1:70780372-70780391 None:intergenic 45.0%
ACTACATGGACCAAATGGCA+AGG - chr7_1:70780372-70780391 Msa1035050:intron 45.0%
CTACATGGACCAAATGGCAA+GGG - chr7_1:70780373-70780392 Msa1035050:intron 45.0%
CAAGTCATGGCCCTTATAGA+GGG + chr7_1:70780723-70780742 None:intergenic 45.0%
TCAAGTCATGGCCCTTATAG+AGG + chr7_1:70780724-70780743 None:intergenic 45.0%
AGAATCTGTTGTCCTTGGGT+AGG - chr7_1:70780791-70780810 Msa1035050:intron 45.0%
GAATCTGTTGTCCTTGGGTA+GGG - chr7_1:70780792-70780811 Msa1035050:intron 45.0%
GATGGAAGGAGTAGTTCATG+GGG + chr7_1:70780833-70780852 None:intergenic 45.0%
GGATGGAAGGAGTAGTTCAT+GGG + chr7_1:70780834-70780853 None:intergenic 45.0%
TGGATGGAAGGAGTAGTTCA+TGG + chr7_1:70780835-70780854 None:intergenic 45.0%
CACATAGATATGGGGCTAGA+GGG + chr7_1:70781204-70781223 None:intergenic 45.0%
TCACATAGATATGGGGCTAG+AGG + chr7_1:70781205-70781224 None:intergenic 45.0%
CGATCACTGTAGTGATAGGA+AGG - chr7_1:70782624-70782643 Msa1035050:intron 45.0%
!! AGCAAGGTGTTTTCTTGCCA+TGG - chr7_1:70782881-70782900 Msa1035050:CDS 45.0%
AACTCAATGCTCGCATACGA+TGG + chr7_1:70782917-70782936 None:intergenic 45.0%
!! CTATATATTAATTAAAAATA+AGG - chr7_1:70782172-70782191 Msa1035050:intron 5.0%
!! TGATGATGACGGTGTTGAGG+TGG + chr7_1:70776895-70776914 None:intergenic 50.0%
TCTTCATCACCCTCTGTCCT+TGG - chr7_1:70777003-70777022 Msa1035050:intron 50.0%
AGAGCCACCCAAAGCTGTTA+AGG - chr7_1:70778081-70778100 Msa1035050:intron 50.0%
TAGGGCATGTTCTTTGGTGG+AGG - chr7_1:70778924-70778943 Msa1035050:intron 50.0%
! CTTTGGTGGAGGTGCAATGT+TGG - chr7_1:70778935-70778954 Msa1035050:intron 50.0%
GCAATGTTGGGAGGAGAACA+AGG - chr7_1:70778948-70778967 Msa1035050:intron 50.0%
TGTTCGACGTGGAATATGCG+AGG - chr7_1:70779086-70779105 Msa1035050:intron 50.0%
!! CGTTGCTTCATGTGGATTGG+TGG - chr7_1:70779301-70779320 Msa1035050:intron 50.0%
GCGAAGAATAGGGAGGGAAA+TGG - chr7_1:70779513-70779532 Msa1035050:CDS 50.0%
GGAGAAGATGCTCTCTCTCA+AGG - chr7_1:70780275-70780294 Msa1035050:intron 50.0%
TGCTCTCTCTCAAGGACTTG+AGG - chr7_1:70780283-70780302 Msa1035050:intron 50.0%
TGTTCATGGCCCTTGCCATT+TGG + chr7_1:70780385-70780404 None:intergenic 50.0%
!! TGATTTCGTGGGGGTACTAC+TGG - chr7_1:70780759-70780778 Msa1035050:intron 50.0%
!! GATTTCGTGGGGGTACTACT+GGG - chr7_1:70780760-70780779 Msa1035050:intron 50.0%
AGTTCATGGGGTTGTGTGGT+AGG + chr7_1:70780821-70780840 None:intergenic 50.0%
GAGTAGTTCATGGGGTTGTG+TGG + chr7_1:70780825-70780844 None:intergenic 50.0%
ATCAGGGATGGAAACCCTAG+AGG + chr7_1:70782562-70782581 None:intergenic 50.0%
! TTGCTGATTGACGCGTCGTT+AGG + chr7_1:70782866-70782885 None:intergenic 50.0%
TAACGACGCGTCAATCAGCA+AGG - chr7_1:70782865-70782884 Msa1035050:CDS 50.0%
!! ACGATGGAAGTACTCAGCCA+TGG + chr7_1:70782901-70782920 None:intergenic 50.0%
!! TGCGAGCATTGAGTTCTCTG+TGG - chr7_1:70782922-70782941 Msa1035050:CDS 50.0%
!! GCGAGCATTGAGTTCTCTGT+GGG - chr7_1:70782923-70782942 Msa1035050:CDS 50.0%
! AGCATTGAGTTCTCTGTGGG+TGG - chr7_1:70782926-70782945 Msa1035050:CDS 50.0%
! GATGACGGTGTTGAGGTGGT+GGG + chr7_1:70776891-70776910 None:intergenic 55.0%
!! TGATGACGGTGTTGAGGTGG+TGG + chr7_1:70776892-70776911 None:intergenic 55.0%
!! CGTGCCTTAACAGCTTTGGG+TGG + chr7_1:70778088-70778107 None:intergenic 55.0%
AGAGGCTGCAATGTTCGACG+TGG - chr7_1:70779075-70779094 Msa1035050:intron 55.0%
TCGACGTGGAATATGCGAGG+TGG - chr7_1:70779089-70779108 Msa1035050:intron 55.0%
GGAATATGCGAGGTGGCTTG+AGG - chr7_1:70779096-70779115 Msa1035050:intron 55.0%
GTGGTAGGTTTCCCTACCCA+AGG + chr7_1:70780806-70780825 None:intergenic 55.0%
!! GGGTGGCTCTGATCCTCTCT+TGG + chr7_1:70778071-70778090 None:intergenic 60.0%
! GGTGGAGGTGCAATGTTGGG+AGG - chr7_1:70778939-70778958 Msa1035050:intron 60.0%
!! TCGTGGGGGTACTACTGGGT+AGG - chr7_1:70780764-70780783 Msa1035050:intron 60.0%
!! CGGTGTTGAGGTGGTGGGAG+TGG + chr7_1:70776886-70776905 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 70776835 70782968 70776835 ID=Msa1035050;Name=Msa1035050
chr7_1 mRNA 70776835 70782968 70776835 ID=Msa1035050-mRNA-1;Parent=Msa1035050;Name=Msa1035050-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.1|0|1|1|1|11|0|466
chr7_1 exon 70782769 70782968 70782769 ID=Msa1035050-mRNA-1:exon:16985;Parent=Msa1035050-mRNA-1
chr7_1 exon 70782540 70782640 70782540 ID=Msa1035050-mRNA-1:exon:16984;Parent=Msa1035050-mRNA-1
chr7_1 exon 70781873 70781961 70781873 ID=Msa1035050-mRNA-1:exon:16983;Parent=Msa1035050-mRNA-1
chr7_1 exon 70781707 70781772 70781707 ID=Msa1035050-mRNA-1:exon:16982;Parent=Msa1035050-mRNA-1
chr7_1 exon 70781392 70781463 70781392 ID=Msa1035050-mRNA-1:exon:16981;Parent=Msa1035050-mRNA-1
chr7_1 exon 70781160 70781219 70781160 ID=Msa1035050-mRNA-1:exon:16980;Parent=Msa1035050-mRNA-1
chr7_1 exon 70780961 70781038 70780961 ID=Msa1035050-mRNA-1:exon:16979;Parent=Msa1035050-mRNA-1
chr7_1 exon 70780804 70780876 70780804 ID=Msa1035050-mRNA-1:exon:16978;Parent=Msa1035050-mRNA-1
chr7_1 exon 70780455 70780726 70780455 ID=Msa1035050-mRNA-1:exon:16977;Parent=Msa1035050-mRNA-1
chr7_1 exon 70779367 70779606 70779367 ID=Msa1035050-mRNA-1:exon:16976;Parent=Msa1035050-mRNA-1
chr7_1 exon 70776835 70776984 70776835 ID=Msa1035050-mRNA-1:exon:16975;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70782769 70782968 70782769 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70782540 70782640 70782540 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70781873 70781961 70781873 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70781707 70781772 70781707 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70781392 70781463 70781392 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70781160 70781219 70781160 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70780961 70781038 70780961 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70780804 70780876 70780804 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70780455 70780726 70780455 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70779367 70779606 70779367 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
chr7_1 CDS 70776835 70776984 70776835 ID=Msa1035050-mRNA-1:cds;Parent=Msa1035050-mRNA-1
Gene Sequence

>Msa1035050

ATGGCTTCCAGTGTTGAAAAACCAAACCAAACCACTACTCAACTAGAACCACTCCCACCACCTCAACACCGTCATCATCAAATTCATCATCAACAACATAAACCACAACATCATCATCATCATCCAATACATGATCATAATCAAATTTCTTTTGGAATGATGCAATCTTCTTCATCACCCTCTGTCCTTGGAAACTACATAAATAAAGATTCGGGAGCTTATGATTTGGGTGAATTGGATCAAGCCCTTTTTCTCTATCTTAATGGACAAACTGACCCATCCAGTGTTCAAGACCAAAAACAAAATTCAACATCAGGAATGAGGCCACCAACTCTCAACATTTTTCCTTCTCAGCCTATGCATGTAGAGCCATCATCGTCCAATTCTAAGGCTAGCATGGAGTTAGTTTCTCCGCAAACAAGTGGATCCAAGAGAGGATCAGAGCCACCCAAAGCTCGAGAGAAAAATCATGGCAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCTAAGATACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGCTTAGGAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATTAAACTTAATCAGATGGAACAGGAGCTACATCATGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAATGTTGGGAGGAGAACAAGGCCTTCCTTCTATGAATACCATTAGCTCAGAGGCTGCAATGTTCGACGTGGAATATGCGAGGTGGCTTGAGGAGCACCACCGTTTAGTATGTGAACTAAGAGCTGCAGTTCATGAGCACATTCCTGAGAATGAGCTTAGAATGTTTGTGGACAAATTCTTGGCTCAATATGATCAAGTAGCTCATCTAAAGAGCTTAGTTGCAAAAGCAGATATATTTCATCTTGTTTCTGGCATGTGGGTTACCCCAATTGAACGTTGCTTCATGTGGATTGGTGGATTTAAACCTTCTGAACTCATTAAGATCATTGTGAGTCAAATTGAACCATTGACCGAGCAACAAATAATGGGCATATATGGATTGCAACAATCTACACAACAAGGAGAAGATGCTCTCTCTCAAGGACTTGAGGCTCTCAATCAAAATCTTTCTGAAACTATAACATCAGATTCATTGAGCTATCCTCCCAATATGACCAACTACATGGACCAAATGGCAAGGGCCATGAACAAACTCTCCACTCTTGAAAGTTTCGTGAGAGAGGCAGATAATCTACGACACCAAACCATTCATCGTCTGAATCAGATCCTAACGACGCGTCAATCAGCAAGGTGTTTTCTTGCCATGGCTGAGTACTTCCATCGTATGCGAGCATTGAGTTCTCTGTGGGTGGCACGACCGCGTCAAGAATAG

Protein sequence

>Msa1035050

MASSVEKPNQTTTQLEPLPPPQHRHHQIHHQQHKPQHHHHHPIHDHNQISFGMMQSSSSPSVLGNYINKDSGAYDLGELDQALFLYLNGQTDPSSVQDQKQNSTSGMRPPTLNIFPSQPMHVEPSSSNSKASMELVSPQTSGSKRGSEPPKAREKNHGKGPTSSSEHEGPKTPDPKILRRLAQNREAARKSRLRKKAYIQQLESSRIKLNQMEQELHHARNQGMFFGGGAMLGGEQGLPSMNTISSEAAMFDVEYARWLEEHHRLVCELRAAVHEHIPENELRMFVDKFLAQYDQVAHLKSLVAKADIFHLVSGMWVTPIERCFMWIGGFKPSELIKIIVSQIEPLTEQQIMGIYGLQQSTQQGEDALSQGLEALNQNLSETITSDSLSYPPNMTNYMDQMARAMNKLSTLESFVREADNLRHQTIHRLNQILTTRQSARCFLAMAEYFHRMRALSSLWVARPRQE*