Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254350 | XP_013464522.1 | 87.730 | 326 | 9 | 3 | 1 | 298 | 1 | 323 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254350 | sp|Q9SYM0|VTE6_ARATH | 67.059 | 255 | 58 | 2 | 67 | 295 | 76 | 330 | 4.10e-113 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254350 | A0A072V9R4 | 87.730 | 326 | 9 | 3 | 1 | 298 | 1 | 323 | 0.0 | 528 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0188680 | Msa0254350 | -0.804390 | 2.210537e-49 | -8.615850e-47 |
| Msa0197660 | Msa0254350 | 0.800449 | 1.433583e-48 | -8.615850e-47 |
| Msa0239800 | Msa0254350 | 0.801622 | 8.255350e-49 | -8.615850e-47 |
| Msa0254350 | Msa0270270 | 0.806045 | 9.953645e-50 | -8.615850e-47 |
| Msa0254350 | Msa0279790 | 0.800793 | 1.219931e-48 | -8.615850e-47 |
| Msa0254350 | Msa0307830 | -0.815025 | 1.142080e-51 | -8.615850e-47 |
| Msa0254350 | Msa0317510 | 0.807494 | 4.918706e-50 | -8.615850e-47 |
| Msa0254350 | Msa0320100 | 0.823050 | 1.706316e-53 | -8.615850e-47 |
| Msa0254350 | Msa0344830 | 0.821582 | 3.739574e-53 | -8.615850e-47 |
| Msa0254350 | Msa0350990 | 0.802241 | 6.160517e-49 | -8.615850e-47 |
| Msa0254350 | Msa0351030 | 0.802799 | 4.726065e-49 | -8.615850e-47 |
| Msa0254350 | Msa0351100 | 0.818336 | 2.067135e-52 | -8.615850e-47 |
| Msa0254350 | Msa0358170 | 0.820736 | 5.857669e-53 | -8.615850e-47 |
| Msa0254350 | Msa0380040 | 0.811456 | 6.939854e-51 | -8.615850e-47 |
| Msa0254350 | Msa0419820 | 0.809522 | 1.815615e-50 | -8.615850e-47 |
| Msa0254350 | Msa0429290 | 0.808167 | 3.537612e-50 | -8.615850e-47 |
| Msa0254350 | Msa0475580 | 0.800399 | 1.467987e-48 | -8.615850e-47 |
| Msa0254350 | Msa0500360 | 0.811903 | 5.545583e-51 | -8.615850e-47 |
| Msa0254350 | Msa0519220 | 0.804042 | 2.611323e-49 | -8.615850e-47 |
| Msa0254350 | Msa0535030 | 0.813791 | 2.140829e-51 | -8.615850e-47 |
| Msa0254350 | Msa0535060 | 0.812839 | 3.463337e-51 | -8.615850e-47 |
| Msa0254350 | Msa0547140 | 0.806219 | 9.148178e-50 | -8.615850e-47 |
| Msa0254350 | Msa0638280 | 0.838780 | 2.346938e-57 | -8.615850e-47 |
| Msa0254350 | Msa0638320 | 0.835646 | 1.486830e-56 | -8.615850e-47 |
| Msa0254350 | Msa0673010 | -0.814293 | 1.658556e-51 | -8.615850e-47 |
| Msa0254350 | Msa0677270 | 0.822233 | 2.643396e-53 | -8.615850e-47 |
| Msa0254350 | Msa0743720 | 0.813564 | 2.401842e-51 | -8.615850e-47 |
| Msa0254350 | Msa0745790 | 0.803800 | 2.931912e-49 | -8.615850e-47 |
| Msa0254350 | Msa0824680 | 0.817412 | 3.341824e-52 | -8.615850e-47 |
| Msa0254350 | Msa0827040 | 0.806752 | 7.062024e-50 | -8.615850e-47 |
| Msa0254350 | Msa0863870 | 0.812601 | 3.905271e-51 | -8.615850e-47 |
| Msa0254350 | Msa0992490 | -0.812675 | 3.763298e-51 | -8.615850e-47 |
| Msa0254350 | Msa1026760 | 0.800071 | 1.711404e-48 | -8.615850e-47 |
| Msa0254350 | Msa1037700 | -0.806379 | 8.466306e-50 | -8.615850e-47 |
| Msa0254350 | Msa1046300 | 0.816920 | 4.312105e-52 | -8.615850e-47 |
| Msa0254350 | Msa1085300 | 0.815148 | 1.072349e-51 | -8.615850e-47 |
| Msa0254350 | Msa1222970 | 0.802554 | 5.309945e-49 | -8.615850e-47 |
| Msa0254350 | Msa1351620 | 0.805609 | 1.228993e-49 | -8.615850e-47 |
| Msa0254350 | Msa1359650 | -0.818653 | 1.751714e-52 | -8.615850e-47 |
| Msa0254350 | Msa1362510 | 0.810392 | 1.179586e-50 | -8.615850e-47 |
| Msa0254350 | Msa1362880 | 0.811095 | 8.311192e-51 | -8.615850e-47 |
| Msa0254350 | Msa1369530 | 0.819880 | 9.207036e-53 | -8.615850e-47 |
| Msa0254350 | Msa1443290 | -0.805191 | 1.503812e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254350 | MtrunA17_Chr2g0314681 | 87.730 | 326 | 9 | 3 | 1 | 298 | 1 | 323 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254350 | AT1G78620.1 | 67.059 | 255 | 58 | 2 | 67 | 295 | 76 | 330 | 4.17e-114 | 333 |
| Msa0254350 | AT1G78620.2 | 64.773 | 264 | 58 | 3 | 67 | 295 | 76 | 339 | 3.36e-111 | 325 |
Find 74 sgRNAs with CRISPR-Local
Find 529 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGAAGAATGTTAGGGTTTA+AGG | 0.166970 | 2_2:+47297747 | None:intergenic |
| TAGAAATTGATTGTTCTTAA+TGG | 0.178049 | 2_2:-47290463 | Msa0254350:three_prime_UTR |
| TGTGTTGGGTTCTCCTATTT+TGG | 0.230659 | 2_2:-47297590 | Msa0254350:CDS |
| AGTCAAAATGGCACAGAAAA+TGG | 0.253977 | 2_2:-47296773 | Msa0254350:CDS |
| AGGGGTCCAGGGAGTGTAAT+TGG | 0.309595 | 2_2:-47296718 | Msa0254350:CDS |
| TGAGCTTACAATGATGAAAT+AGG | 0.314279 | 2_2:+47297471 | None:intergenic |
| AAATTTAGGGATGCAAGTTT+TGG | 0.335808 | 2_2:+47290732 | None:intergenic |
| AATCTTGGTGAAAGCATAAT+TGG | 0.338164 | 2_2:-47291393 | Msa0254350:CDS |
| ACTCTTACTTGGCGTGCTTT+TGG | 0.341574 | 2_2:-47297520 | Msa0254350:CDS |
| TTGCTGCTGCGAAGAATGTT+AGG | 0.342176 | 2_2:+47297739 | None:intergenic |
| GACAACCCAGTAACCAAAAT+AGG | 0.349060 | 2_2:+47297577 | None:intergenic |
| ATGTTAGGGTTTAAGGTTGT+TGG | 0.377663 | 2_2:+47297754 | None:intergenic |
| GTTGGTGTAAATGTGAGTTT+TGG | 0.381754 | 2_2:+47297772 | None:intergenic |
| TTTCACCAAGATTAGCAAAC+TGG | 0.381772 | 2_2:+47291403 | None:intergenic |
| AGGGTTTGTGTTTGAGATGT+TGG | 0.387947 | 2_2:+47297806 | None:intergenic |
| GCTGCCCAGTTTGCTAATCT+TGG | 0.391967 | 2_2:-47291408 | Msa0254350:CDS |
| GTTACTGGGTTGTCGTTTGA+AGG | 0.398860 | 2_2:-47297568 | Msa0254350:CDS |
| AGCGGCAACAAAAGTCAAAA+TGG | 0.415069 | 2_2:-47296785 | Msa0254350:CDS |
| AGATGTTGTCGGAGGAGTTA+TGG | 0.418824 | 2_2:-47297674 | Msa0254350:CDS |
| AAGAGAAGAGGGAGAGAGTG+TGG | 0.421930 | 2_2:+47297829 | None:intergenic |
| TGAGATGTTGGAAGAGAAGA+GGG | 0.422241 | 2_2:+47297818 | None:intergenic |
| AGAAAAGGAAGAAGGGGTCC+AGG | 0.424572 | 2_2:-47296730 | Msa0254350:CDS |
| TAATTTGTTGATCTTTGTGT+TGG | 0.434219 | 2_2:-47297605 | Msa0254350:CDS |
| CAACATCATCAACATATCAA+TGG | 0.443415 | 2_2:-47290789 | Msa0254350:CDS |
| AGTTTGTGTTACTGTAATCA+AGG | 0.453998 | 2_2:-47290510 | Msa0254350:three_prime_UTR |
| GTCTACATTTATACAAGAAA+AGG | 0.455612 | 2_2:+47290544 | None:intergenic |
| TTTCTCAGCTTTGGAGACTT+GGG | 0.460386 | 2_2:-47296633 | Msa0254350:intron |
| GAAGGGGCGGTTAGTGTTGA+AGG | 0.469316 | 2_2:-47296251 | Msa0254350:CDS |
| AACATCATCAACATATCAAT+GGG | 0.473319 | 2_2:-47290788 | Msa0254350:CDS |
| CTGAGAAAAGAAAAGGAAGA+AGG | 0.478719 | 2_2:-47296738 | Msa0254350:CDS |
| AGTGTTGAAGGAACCTTGGC+TGG | 0.481616 | 2_2:-47296239 | Msa0254350:CDS |
| CTACCTTGAATGACGTAACT+AGG | 0.481900 | 2_2:+47296288 | None:intergenic |
| AATTTGTTGATCTTTGTGTT+GGG | 0.481945 | 2_2:-47297604 | Msa0254350:CDS |
| ACCGCCCCTTCTGTACCTCT+TGG | 0.489864 | 2_2:+47296263 | None:intergenic |
| ACAAACGCAACCGGCAGCAC+TGG | 0.490906 | 2_2:+47296693 | None:intergenic |
| AAATTGATTGTTCTTAATGG+TGG | 0.494574 | 2_2:-47290460 | Msa0254350:three_prime_UTR |
| GAGGAAAGCACAAACGCAAC+CGG | 0.496460 | 2_2:+47296684 | None:intergenic |
| AGTAAGACACTTCAACATCT+AGG | 0.497206 | 2_2:+47290634 | None:intergenic |
| GCCACGTGGAAGGTGATGAT+TGG | 0.521471 | 2_2:+47297644 | None:intergenic |
| GTCTCTTGTGTTGAAAGCAA+TGG | 0.522323 | 2_2:-47290594 | Msa0254350:three_prime_UTR |
| TTGAGATGTTGGAAGAGAAG+AGG | 0.525990 | 2_2:+47297817 | None:intergenic |
| GTAGTTCCAAGAGGTACAGA+AGG | 0.531342 | 2_2:-47296269 | Msa0254350:CDS |
| AGAGAAGAGGGAGAGAGTGT+GGG | 0.533921 | 2_2:+47297830 | None:intergenic |
| CTGGATCCAATTACACTCCC+TGG | 0.535232 | 2_2:+47296712 | None:intergenic |
| GTACCTAGTTACGTCATTCA+AGG | 0.536903 | 2_2:-47296291 | Msa0254350:CDS |
| TGGTGCATCATTTCAAGAGA+AGG | 0.540231 | 2_2:-47291373 | Msa0254350:CDS |
| TGCTGCTGCGAAGAATGTTA+GGG | 0.548759 | 2_2:+47297740 | None:intergenic |
| GGGGTTGCTGAGAAAAGAAA+AGG | 0.555747 | 2_2:-47296745 | Msa0254350:CDS |
| GAAAAGGAAGAAGGGGTCCA+GGG | 0.558281 | 2_2:-47296729 | Msa0254350:CDS |
| TTACTGGGTTGTCGTTTGAA+GGG | 0.561009 | 2_2:-47297567 | Msa0254350:CDS |
| TTCACCAAGATTAGCAAACT+GGG | 0.562650 | 2_2:+47291404 | None:intergenic |
| TCAAGTGTTCAAGATGTTGT+CGG | 0.564972 | 2_2:-47297685 | Msa0254350:intron |
| AAAGAAGATTGCCACGTGGA+AGG | 0.567374 | 2_2:+47297634 | None:intergenic |
| AAGAGAAGGAAGGATTTCGA+TGG | 0.569598 | 2_2:-47291359 | Msa0254350:CDS |
| TGAGAAAAGAAAAGGAAGAA+GGG | 0.576058 | 2_2:-47296737 | Msa0254350:CDS |
| GGTTAGTGTTGAAGGAACCT+TGG | 0.579465 | 2_2:-47296243 | Msa0254350:CDS |
| AGATGCTAAAATTCCAGCCA+AGG | 0.586125 | 2_2:+47296226 | None:intergenic |
| GGCACAGAAAATGGAACAAG+GGG | 0.597382 | 2_2:-47296764 | Msa0254350:CDS |
| TAGTTCCAAGAGGTACAGAA+GGG | 0.598143 | 2_2:-47296268 | Msa0254350:CDS |
| GTAATTGGATCCAGTGCTGC+CGG | 0.598709 | 2_2:-47296703 | Msa0254350:CDS |
| AGAGAAGGAAGGATTTCGAT+GGG | 0.605161 | 2_2:-47291358 | Msa0254350:intron |
| GCATCATTTCAAGAGAAGGA+AGG | 0.612056 | 2_2:-47291369 | Msa0254350:CDS |
| ATGGCACAGAAAATGGAACA+AGG | 0.629097 | 2_2:-47296766 | Msa0254350:CDS |
| GAGAAAAGAAAAGGAAGAAG+GGG | 0.634746 | 2_2:-47296736 | Msa0254350:CDS |
| TCCAAGAGGTACAGAAGGGG+CGG | 0.638566 | 2_2:-47296264 | Msa0254350:CDS |
| GCCCAGAAGAAAACTGACAA+AGG | 0.643507 | 2_2:+47296193 | None:intergenic |
| TGGCACAGAAAATGGAACAA+GGG | 0.644509 | 2_2:-47296765 | Msa0254350:CDS |
| GGGGTTTGTTTAGGGTACAG+CGG | 0.644675 | 2_2:-47296803 | Msa0254350:intron |
| GCTTGTAAGTTGCAATGCAG+AGG | 0.644795 | 2_2:-47290397 | None:intergenic |
| AGTTCCAAGAGGTACAGAAG+GGG | 0.678598 | 2_2:-47296267 | Msa0254350:CDS |
| AGTGTTCAAGATGTTGTCGG+AGG | 0.695402 | 2_2:-47297682 | Msa0254350:intron |
| TCATTCAAGGTAGTTCCAAG+AGG | 0.702321 | 2_2:-47296278 | Msa0254350:CDS |
| TCCAATCATCACCTTCCACG+TGG | 0.708988 | 2_2:-47297645 | Msa0254350:CDS |
| TAACAAAGAAGATTGCCACG+TGG | 0.798830 | 2_2:+47297630 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTAATTATTTTTAAAA+TGG | - | chr2_2:47293007-47293026 | Msa0254350:intron | 0.0% |
| !!! | AAATTAATTATTTTTAAAAT+GGG | - | chr2_2:47293008-47293027 | Msa0254350:intron | 0.0% |
| !!! | TTAATATATAAATTTTAAAA+CGG | + | chr2_2:47293815-47293834 | None:intergenic | 0.0% |
| !!! | TTTCTTATTTTATGAAATTT+TGG | - | chr2_2:47291265-47291284 | Msa0254350:intron | 10.0% |
| !!! | TGTTAATTAATATGATATTT+TGG | - | chr2_2:47292837-47292856 | Msa0254350:intron | 10.0% |
| !! | ATTCCTATAAAAATAAAATA+AGG | - | chr2_2:47293965-47293984 | Msa0254350:intron | 10.0% |
| !! | TTCCTATAAAAATAAAATAA+GGG | - | chr2_2:47293966-47293985 | Msa0254350:intron | 10.0% |
| !! | TAAAATGTAAATTAAATTCA+GGG | - | chr2_2:47294079-47294098 | Msa0254350:intron | 10.0% |
| !!! | AATTTTGAATTTGAAATTTA+AGG | - | chr2_2:47294118-47294137 | Msa0254350:intron | 10.0% |
| !! | TTGAAAAAAATTCAATATTT+AGG | - | chr2_2:47294153-47294172 | Msa0254350:intron | 10.0% |
| !!! | CATTTTTTTAATAGAAAAAT+GGG | - | chr2_2:47294312-47294331 | Msa0254350:intron | 10.0% |
| !!! | TTGAAAAATTTGATTTTTGT+TGG | - | chr2_2:47290885-47290904 | Msa0254350:intron | 15.0% |
| !!! | ATTTGTGAAATTTTGAAAAT+GGG | - | chr2_2:47291034-47291053 | Msa0254350:intron | 15.0% |
| !!! | ATTTTGAATGTTTTGTTTTT+GGG | - | chr2_2:47291207-47291226 | Msa0254350:intron | 15.0% |
| !!! | AATTTATCAATTTTCAGATA+AGG | + | chr2_2:47291245-47291264 | None:intergenic | 15.0% |
| !!! | ATTTTATGAAATTTTGGAAA+TGG | - | chr2_2:47291271-47291290 | Msa0254350:intron | 15.0% |
| !!! | TTTTATGAAATTTTGGAAAT+GGG | - | chr2_2:47291272-47291291 | Msa0254350:intron | 15.0% |
| !!! | ATATATTTTTAACAGAAACA+CGG | + | chr2_2:47292479-47292498 | None:intergenic | 15.0% |
| !! | AAATCTTAAATATAAACCTT+AGG | - | chr2_2:47292603-47292622 | Msa0254350:intron | 15.0% |
| !! | AATCTTAAATATAAACCTTA+GGG | - | chr2_2:47292604-47292623 | Msa0254350:intron | 15.0% |
| !!! | ATCCCTTATTTTATTTTTAT+AGG | + | chr2_2:47293971-47293990 | None:intergenic | 15.0% |
| !! | AATTGAACAAAAAATTTGTA+AGG | - | chr2_2:47293993-47294012 | Msa0254350:intron | 15.0% |
| !! | GTAAAATGTAAATTAAATTC+AGG | - | chr2_2:47294078-47294097 | Msa0254350:intron | 15.0% |
| !! | AAAAAAATTCAATATTTAGG+AGG | - | chr2_2:47294156-47294175 | Msa0254350:intron | 15.0% |
| !!! | AGATTTTGAATTTTGATTTA+TGG | - | chr2_2:47294189-47294208 | Msa0254350:intron | 15.0% |
| !!! | GCATTTTTTTAATAGAAAAA+TGG | - | chr2_2:47294311-47294330 | Msa0254350:intron | 15.0% |
| !! | TTGCCTTAAAAATATATTAT+TGG | - | chr2_2:47294449-47294468 | Msa0254350:intron | 15.0% |
| !! | TGCCTTAAAAATATATTATT+GGG | - | chr2_2:47294450-47294469 | Msa0254350:intron | 15.0% |
| !!! | TCAAAACAAATTAAATGTTT+TGG | - | chr2_2:47294502-47294521 | Msa0254350:intron | 15.0% |
| !!! | CAAAACAAATTAAATGTTTT+GGG | - | chr2_2:47294503-47294522 | Msa0254350:intron | 15.0% |
| !!! | AAAACAAATTAAATGTTTTG+GGG | - | chr2_2:47294504-47294523 | Msa0254350:intron | 15.0% |
| !!! | TTCAATTTTATTTGAATTGT+GGG | + | chr2_2:47296441-47296460 | None:intergenic | 15.0% |
| !!! | ATTCAATTTTATTTGAATTG+TGG | + | chr2_2:47296442-47296461 | None:intergenic | 15.0% |
| !!! | GATTTGTGAAATTTTGAAAA+TGG | - | chr2_2:47291033-47291052 | Msa0254350:intron | 20.0% |
| !!! | TTATGTGAAATTCTGAAAAT+GGG | - | chr2_2:47291156-47291175 | Msa0254350:intron | 20.0% |
| !!! | GATTTTGAATGTTTTGTTTT+TGG | - | chr2_2:47291206-47291225 | Msa0254350:intron | 20.0% |
| !!! | TTTTGAATGTTTTGTTTTTG+GGG | - | chr2_2:47291208-47291227 | Msa0254350:intron | 20.0% |
| !!! | TTTTGTAGAATTTGTTATTC+TGG | - | chr2_2:47291302-47291321 | Msa0254350:intron | 20.0% |
| !!! | TTTTCATTGTTTTTAGTTCT+AGG | - | chr2_2:47291401-47291420 | Msa0254350:CDS | 20.0% |
| !!! | TTTCATTGTTTTTAGTTCTA+GGG | - | chr2_2:47291402-47291421 | Msa0254350:CDS | 20.0% |
| !!! | TGAATCTGAAATATGTTTAT+GGG | - | chr2_2:47292111-47292130 | Msa0254350:intron | 20.0% |
| !!! | GTGTTTCTGTTAAAAATATA+TGG | - | chr2_2:47292478-47292497 | Msa0254350:intron | 20.0% |
| !!! | GTATTTTATCTTTACTTTTG+AGG | - | chr2_2:47292862-47292881 | Msa0254350:intron | 20.0% |
| !! | AAAAATTCCTTGATGTTATT+GGG | + | chr2_2:47292967-47292986 | None:intergenic | 20.0% |
| !! | AAAAAATTCCTTGATGTTAT+TGG | + | chr2_2:47292968-47292987 | None:intergenic | 20.0% |
| !! | AGTTTATCTAGATACATAAA+TGG | - | chr2_2:47293213-47293232 | Msa0254350:intron | 20.0% |
| !!! | TTAAAGTTGAGATTTTTCAA+AGG | - | chr2_2:47293408-47293427 | Msa0254350:intron | 20.0% |
| !!! | TAAAGTTGAGATTTTTCAAA+GGG | - | chr2_2:47293409-47293428 | Msa0254350:intron | 20.0% |
| !!! | TAAAATTTTATCCTATTTGC+AGG | + | chr2_2:47293694-47293713 | None:intergenic | 20.0% |
| !! | AATATTAAATTGGCTATAAC+CGG | - | chr2_2:47293735-47293754 | Msa0254350:intron | 20.0% |
| !! | TTAATAGAAAAATGGGAAAA+AGG | - | chr2_2:47294319-47294338 | Msa0254350:intron | 20.0% |
| !!! | TTTATTTTTTTGTCCCATTT+AGG | + | chr2_2:47294377-47294396 | None:intergenic | 20.0% |
| !! | TGGGACAAAAAAATAAATAA+AGG | - | chr2_2:47294380-47294399 | Msa0254350:intron | 20.0% |
| !! | GTTACAACTAAATAAGATAA+AGG | - | chr2_2:47294411-47294430 | Msa0254350:intron | 20.0% |
| !! | GCCTTAAAAATATATTATTG+GGG | - | chr2_2:47294451-47294470 | Msa0254350:intron | 20.0% |
| !!! | ACCCCAATAATATATTTTTA+AGG | + | chr2_2:47294455-47294474 | None:intergenic | 20.0% |
| !! | ATTAGAAGATAAATCCAAAT+AGG | + | chr2_2:47295117-47295136 | None:intergenic | 20.0% |
| !! | TTATCTTCTAATGAAATCAT+TGG | - | chr2_2:47295125-47295144 | Msa0254350:intron | 20.0% |
| !! | TATAGATATTCCTATGAAAT+TGG | - | chr2_2:47295986-47296005 | Msa0254350:intron | 20.0% |
| !!! | TGTGTTATGTTTAGTTTTTA+GGG | - | chr2_2:47296035-47296054 | Msa0254350:intron | 20.0% |
| !! | ATATTGTTCTTTATATGAAC+TGG | + | chr2_2:47296294-47296313 | None:intergenic | 20.0% |
| !! | ACAATTAAATGCATAACATA+CGG | + | chr2_2:47296592-47296611 | None:intergenic | 20.0% |
| !!! | TGTATAGTTTTTGCTTTTTA+TGG | - | chr2_2:47296729-47296748 | Msa0254350:CDS | 20.0% |
| !! | AAAATTAAGAAGTAAATCAC+TGG | + | chr2_2:47296787-47296806 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTCTTAAACAGAT+TGG | - | chr2_2:47296803-47296822 | Msa0254350:intron | 20.0% |
| !!! | AAAATTTTGCAGCAAATTTA+GGG | + | chr2_2:47297546-47297565 | None:intergenic | 20.0% |
| !! | TAGAAATTGATTGTTCTTAA+TGG | - | chr2_2:47297799-47297818 | Msa0254350:CDS | 20.0% |
| !!! | TAATTTGTTGATCTTTGTGT+TGG | - | chr2_2:47290657-47290676 | Msa0254350:three_prime_UTR | 25.0% |
| !!! | AATTTGTTGATCTTTGTGTT+GGG | - | chr2_2:47290658-47290677 | Msa0254350:three_prime_UTR | 25.0% |
| !!! | CTCAATTTTCGTTTTTTCTA+TGG | - | chr2_2:47290810-47290829 | Msa0254350:intron | 25.0% |
| !!! | GTTTCGTTTTTGTTTATGAT+TGG | - | chr2_2:47290832-47290851 | Msa0254350:intron | 25.0% |
| !!! | GTGCAAAATTTGATTTTTGT+TGG | - | chr2_2:47291009-47291028 | Msa0254350:intron | 25.0% |
| !!! | TTTAGAGATTTTGGTTGATT+TGG | - | chr2_2:47291057-47291076 | Msa0254350:intron | 25.0% |
| !!! | ATTTTGGTTGATTTGGATTT+TGG | - | chr2_2:47291064-47291083 | Msa0254350:intron | 25.0% |
| !!! | TTTTGGTTGATTTGGATTTT+GGG | - | chr2_2:47291065-47291084 | Msa0254350:intron | 25.0% |
| !!! | AAGAATTTGTGTTGTTTGAA+AGG | - | chr2_2:47291091-47291110 | Msa0254350:intron | 25.0% |
| !!! | TGTTTTTTGATTGCAAAGTT+TGG | - | chr2_2:47291121-47291140 | Msa0254350:intron | 25.0% |
| ! | TTGCAAAGTTTGGTTATTAA+TGG | - | chr2_2:47291131-47291150 | Msa0254350:intron | 25.0% |
| !! | GTTATGTGAAATTCTGAAAA+TGG | - | chr2_2:47291155-47291174 | Msa0254350:intron | 25.0% |
| !! | TATGTGAAATTCTGAAAATG+GGG | - | chr2_2:47291157-47291176 | Msa0254350:intron | 25.0% |
| !!! | AGAATTTGTTATTCTGGAAT+TGG | - | chr2_2:47291308-47291327 | Msa0254350:intron | 25.0% |
| !!! | GAATTTGTTATTCTGGAATT+GGG | - | chr2_2:47291309-47291328 | Msa0254350:intron | 25.0% |
| !! | TTGATAGAAAAGTATAGTGT+CGG | - | chr2_2:47291870-47291889 | Msa0254350:intron | 25.0% |
| !! | CTGAATCTGAAATATGTTTA+TGG | - | chr2_2:47292110-47292129 | Msa0254350:intron | 25.0% |
| !!! | AATACAGTTGGTAAAAGTAA+TGG | - | chr2_2:47292428-47292447 | Msa0254350:intron | 25.0% |
| !!! | ATTTTATTTAAGATGGACAG+TGG | - | chr2_2:47292553-47292572 | Msa0254350:intron | 25.0% |
| !!! | TTTACTTTTGAGGATCATAT+TGG | - | chr2_2:47292872-47292891 | Msa0254350:intron | 25.0% |
| ! | AAAATTCCTTGATGTTATTG+GGG | + | chr2_2:47292966-47292985 | None:intergenic | 25.0% |
| ! | TAAATTGAGGTCCATATTAA+GGG | + | chr2_2:47293036-47293055 | None:intergenic | 25.0% |
| ! | TTAAATTGAGGTCCATATTA+AGG | + | chr2_2:47293037-47293056 | None:intergenic | 25.0% |
| ! | TAATATGGACCTCAATTTAA+AGG | - | chr2_2:47293037-47293056 | Msa0254350:intron | 25.0% |
| ! | CAGAATTTGTATACACAAAA+TGG | + | chr2_2:47293119-47293138 | None:intergenic | 25.0% |
| ! | ATAAACTAGTTAATGTACAG+CGG | + | chr2_2:47293200-47293219 | None:intergenic | 25.0% |
| ! | ATTCAGATCTTTATGTGATT+TGG | + | chr2_2:47293243-47293262 | None:intergenic | 25.0% |
| !!! | AAAGTTGAGATTTTTCAAAG+GGG | - | chr2_2:47293410-47293429 | Msa0254350:intron | 25.0% |
| ! | AATGGTAGAAGAATTGTAAA+TGG | - | chr2_2:47293461-47293480 | Msa0254350:intron | 25.0% |
| ! | ATGGTAGAAGAATTGTAAAT+GGG | - | chr2_2:47293462-47293481 | Msa0254350:intron | 25.0% |
| ! | TAATATGGACCATATTGAAA+GGG | + | chr2_2:47293786-47293805 | None:intergenic | 25.0% |
| ! | TTTCAATATGGTCCATATTA+GGG | - | chr2_2:47293786-47293805 | Msa0254350:intron | 25.0% |
| ! | AGTTGAATAAAACTTATGCA+GGG | + | chr2_2:47293893-47293912 | None:intergenic | 25.0% |
| ! | AAGTTGAATAAAACTTATGC+AGG | + | chr2_2:47293894-47293913 | None:intergenic | 25.0% |
| !!! | TGCATAAGTTTTATTCAACT+TGG | - | chr2_2:47293893-47293912 | Msa0254350:intron | 25.0% |
| ! | TTGAAATTTAAGGAAGAAGA+AGG | - | chr2_2:47294128-47294147 | Msa0254350:intron | 25.0% |
| !! | TGATAGATAAAGTACCTAAA+TGG | - | chr2_2:47294360-47294379 | Msa0254350:intron | 25.0% |
| !! | GATAGATAAAGTACCTAAAT+GGG | - | chr2_2:47294361-47294380 | Msa0254350:intron | 25.0% |
| ! | AATCAGGATAATATCTGATA+TGG | + | chr2_2:47294925-47294944 | None:intergenic | 25.0% |
| ! | ATATCAGATATTATCCTGAT+TGG | - | chr2_2:47294924-47294943 | Msa0254350:intron | 25.0% |
| ! | TATTATCCTGATTGGATTTA+TGG | - | chr2_2:47294932-47294951 | Msa0254350:intron | 25.0% |
| ! | ATTATCCTGATTGGATTTAT+GGG | - | chr2_2:47294933-47294952 | Msa0254350:intron | 25.0% |
| ! | ATCAACTAAGAAAGAATACA+AGG | + | chr2_2:47294966-47294985 | None:intergenic | 25.0% |
| ! | ATTCTATTCCCTAATCTATA+GGG | - | chr2_2:47294984-47295003 | Msa0254350:intron | 25.0% |
| ! | TGAACTACAATATATACATG+TGG | + | chr2_2:47295024-47295043 | None:intergenic | 25.0% |
| !! | TTCTAATGAAATCATTGGTT+AGG | - | chr2_2:47295130-47295149 | Msa0254350:intron | 25.0% |
| !! | GTATGAAATCTGAAATTGTA+CGG | + | chr2_2:47295265-47295284 | None:intergenic | 25.0% |
| ! | ATTGATATCTGGATCTTTAA+TGG | - | chr2_2:47295302-47295321 | Msa0254350:intron | 25.0% |
| ! | ATTTCATCTTCCACTTAATT+TGG | - | chr2_2:47295515-47295534 | Msa0254350:intron | 25.0% |
| ! | TTTCATCTTCCACTTAATTT+GGG | - | chr2_2:47295516-47295535 | Msa0254350:intron | 25.0% |
| ! | TTAAACTTCACGTTATACTT+CGG | - | chr2_2:47295628-47295647 | Msa0254350:intron | 25.0% |
| ! | ACTTGTAGCATACTTAATAT+TGG | + | chr2_2:47295726-47295745 | None:intergenic | 25.0% |
| ! | TATTAAGTATGCTACAAGTT+TGG | - | chr2_2:47295727-47295746 | Msa0254350:intron | 25.0% |
| ! | ATTAAGTATGCTACAAGTTT+GGG | - | chr2_2:47295728-47295747 | Msa0254350:intron | 25.0% |
| !! | GTAGTATTTTCCAATTTCAT+AGG | + | chr2_2:47295999-47296018 | None:intergenic | 25.0% |
| ! | ATGAAATTGGAAAATACTAC+TGG | - | chr2_2:47295999-47296018 | Msa0254350:intron | 25.0% |
| !!! | CTGTGTTATGTTTAGTTTTT+AGG | - | chr2_2:47296034-47296053 | Msa0254350:intron | 25.0% |
| ! | AATCAAAGGAATTTGTATCA+TGG | - | chr2_2:47296063-47296082 | Msa0254350:intron | 25.0% |
| ! | ACACATTTCTATGTTTCAAT+AGG | - | chr2_2:47296122-47296141 | Msa0254350:intron | 25.0% |
| !!! | AATTTTATTTGAATTGTGGG+TGG | + | chr2_2:47296438-47296457 | None:intergenic | 25.0% |
| !!! | TTTTAAAAACTAGACCAAAC+CGG | + | chr2_2:47296509-47296528 | None:intergenic | 25.0% |
| !!! | TTGGTCTAGTTTTTAAAACA+TGG | - | chr2_2:47296511-47296530 | Msa0254350:intron | 25.0% |
| !!! | TGGTCTAGTTTTTAAAACAT+GGG | - | chr2_2:47296512-47296531 | Msa0254350:intron | 25.0% |
| ! | GTTATGCATTTAATTGTTCT+TGG | - | chr2_2:47296595-47296614 | Msa0254350:intron | 25.0% |
| ! | TAATGAAACCAATAAAAGGA+TGG | - | chr2_2:47296639-47296658 | Msa0254350:CDS | 25.0% |
| ! | TAAGGATACTTCAATAACTT+CGG | + | chr2_2:47296707-47296726 | None:intergenic | 25.0% |
| ! | AAGCAAAAACTATACAAGTA+AGG | + | chr2_2:47296725-47296744 | None:intergenic | 25.0% |
| ! | TGTCATATATCACAAATCAT+AGG | + | chr2_2:47297073-47297092 | None:intergenic | 25.0% |
| !!! | TTTTTTAAGCATACATTGCA+TGG | - | chr2_2:47297116-47297135 | Msa0254350:intron | 25.0% |
| ! | AACATCATCAACATATCAAT+GGG | - | chr2_2:47297474-47297493 | Msa0254350:intron | 25.0% |
| !! | GAAAATTTTGCAGCAAATTT+AGG | + | chr2_2:47297547-47297566 | None:intergenic | 25.0% |
| !!! | AATTTGCTGCAAAATTTTCT+TGG | - | chr2_2:47297548-47297567 | Msa0254350:CDS | 25.0% |
| ! | GTCTACATTTATACAAGAAA+AGG | + | chr2_2:47297721-47297740 | None:intergenic | 25.0% |
| ! | AAATTGATTGTTCTTAATGG+TGG | - | chr2_2:47297802-47297821 | Msa0254350:CDS | 25.0% |
| TGAGCTTACAATGATGAAAT+AGG | + | chr2_2:47290794-47290813 | None:intergenic | 30.0% | |
| !! | TTGTTGGAGTTTTGTGAAAT+TGG | - | chr2_2:47290901-47290920 | Msa0254350:intron | 30.0% |
| !! | TGTTGGAGTTTTGTGAAATT+GGG | - | chr2_2:47290902-47290921 | Msa0254350:intron | 30.0% |
| ! | TTTTGTGAAATTGGGGAAAT+GGG | - | chr2_2:47290910-47290929 | Msa0254350:intron | 30.0% |
| !!! | TTTTGGTTGATTTGGTTTCT+GGG | - | chr2_2:47290941-47290960 | Msa0254350:intron | 30.0% |
| !! | TCTGGGTTTTGTAGAATTTT+TGG | - | chr2_2:47290958-47290977 | Msa0254350:intron | 30.0% |
| !! | GAAAATGGGTTTAGAGATTT+TGG | - | chr2_2:47291048-47291067 | Msa0254350:intron | 30.0% |
| ! | ATGTGAAATTCTGAAAATGG+GGG | - | chr2_2:47291158-47291177 | Msa0254350:intron | 30.0% |
| !!! | ATGTTTTGTTTTTGGGGTTT+AGG | - | chr2_2:47291214-47291233 | Msa0254350:intron | 30.0% |
| ! | AAAGTGTTAAACTTCGCAAA+AGG | - | chr2_2:47291347-47291366 | Msa0254350:intron | 30.0% |
| TGAGAAAAGAAAAGGAAGAA+GGG | - | chr2_2:47291525-47291544 | Msa0254350:intron | 30.0% | |
| ! | TATTGATAACAACACAGTCA+AGG | + | chr2_2:47291811-47291830 | None:intergenic | 30.0% |
| TATTTCAGATTCAGAGATCA+GGG | + | chr2_2:47292104-47292123 | None:intergenic | 30.0% | |
| ATATTTCAGATTCAGAGATC+AGG | + | chr2_2:47292105-47292124 | None:intergenic | 30.0% | |
| ATATGTTTATGGGATTACTG+TGG | - | chr2_2:47292121-47292140 | Msa0254350:intron | 30.0% | |
| TATGTTTATGGGATTACTGT+GGG | - | chr2_2:47292122-47292141 | Msa0254350:intron | 30.0% | |
| !! | AATGGATTAATGAGGTAATC+AGG | - | chr2_2:47292152-47292171 | Msa0254350:intron | 30.0% |
| TCAATGAAATCTCCGAATAA+AGG | + | chr2_2:47292187-47292206 | None:intergenic | 30.0% | |
| GCAGAAATGTATCGTATATA+AGG | + | chr2_2:47292217-47292236 | None:intergenic | 30.0% | |
| ! | CGAGAAAATGCTTTATTAGT+GGG | - | chr2_2:47292236-47292255 | Msa0254350:intron | 30.0% |
| TCTGTTCATGATGATTGAAA+TGG | - | chr2_2:47292323-47292342 | Msa0254350:intron | 30.0% | |
| TTCATGATGATTGAAATGGT+AGG | - | chr2_2:47292327-47292346 | Msa0254350:intron | 30.0% | |
| AGGTAAGTAATGAATACAGT+TGG | - | chr2_2:47292416-47292435 | Msa0254350:intron | 30.0% | |
| !! | AGTTGGTAAAAGTAATGGAT+TGG | - | chr2_2:47292433-47292452 | Msa0254350:intron | 30.0% |
| !! | GTTGGTAAAAGTAATGGATT+GGG | - | chr2_2:47292434-47292453 | Msa0254350:intron | 30.0% |
| AAATTCCTTGATGTTATTGG+GGG | + | chr2_2:47292965-47292984 | None:intergenic | 30.0% | |
| AGGTTCAATCCTTTAAATTG+AGG | + | chr2_2:47293049-47293068 | None:intergenic | 30.0% | |
| TTATAGCTGGTAATTTACTG+AGG | + | chr2_2:47293069-47293088 | None:intergenic | 30.0% | |
| TCAGTAAATTACCAGCTATA+AGG | - | chr2_2:47293068-47293087 | Msa0254350:intron | 30.0% | |
| CAGTAAATTACCAGCTATAA+GGG | - | chr2_2:47293069-47293088 | Msa0254350:intron | 30.0% | |
| AGTAAATTACCAGCTATAAG+GGG | - | chr2_2:47293070-47293089 | Msa0254350:intron | 30.0% | |
| TGTATACACAAAATGGAAAC+CGG | + | chr2_2:47293112-47293131 | None:intergenic | 30.0% | |
| ! | ATTATGAGGATGGGTTTAAA+AGG | + | chr2_2:47293170-47293189 | None:intergenic | 30.0% |
| ! | AAGTATGAGGTTTTCTTGTT+TGG | + | chr2_2:47293361-47293380 | None:intergenic | 30.0% |
| !! | AAGTTGAGATTTTTCAAAGG+GGG | - | chr2_2:47293411-47293430 | Msa0254350:intron | 30.0% |
| ! | AGCTTTAACTTTCGTTTCAA+TGG | - | chr2_2:47293443-47293462 | Msa0254350:intron | 30.0% |
| AGTGAGGTAAAACTATAAAC+TGG | - | chr2_2:47293485-47293504 | Msa0254350:intron | 30.0% | |
| AACCATTGAAATGGTTTCAT+GGG | + | chr2_2:47293605-47293624 | None:intergenic | 30.0% | |
| CTATTACTCTCTGTTTACAA+AGG | + | chr2_2:47293667-47293686 | None:intergenic | 30.0% | |
| CTTTGTAAACAGAGAGTAAT+AGG | - | chr2_2:47293665-47293684 | Msa0254350:intron | 30.0% | |
| ATATTGAAAGGGTCCAATTA+TGG | + | chr2_2:47293775-47293794 | None:intergenic | 30.0% | |
| ATAATTGGACCCTTTCAATA+TGG | - | chr2_2:47293774-47293793 | Msa0254350:intron | 30.0% | |
| CTAATATGGACCATATTGAA+AGG | + | chr2_2:47293787-47293806 | None:intergenic | 30.0% | |
| CTTTCAATATGGTCCATATT+AGG | - | chr2_2:47293785-47293804 | Msa0254350:intron | 30.0% | |
| TTCAATATGGTCCATATTAG+GGG | - | chr2_2:47293787-47293806 | Msa0254350:intron | 30.0% | |
| ATTCAGGGTTTATTGAGATT+TGG | - | chr2_2:47294094-47294113 | Msa0254350:intron | 30.0% | |
| TTCAGGGTTTATTGAGATTT+GGG | - | chr2_2:47294095-47294114 | Msa0254350:intron | 30.0% | |
| CTTATTTAGTTGTAACACAC+TGG | + | chr2_2:47294407-47294426 | None:intergenic | 30.0% | |
| GATTCTATTCCCTAATCTAT+AGG | - | chr2_2:47294983-47295002 | Msa0254350:intron | 30.0% | |
| TAACCAATCCCTATAGATTA+GGG | + | chr2_2:47294995-47295014 | None:intergenic | 30.0% | |
| CTACAATATATACATGTGGT+AGG | + | chr2_2:47295020-47295039 | None:intergenic | 30.0% | |
| TTCTCTATGTGATAGAATGA+GGG | + | chr2_2:47295047-47295066 | None:intergenic | 30.0% | |
| ATTCTCTATGTGATAGAATG+AGG | + | chr2_2:47295048-47295067 | None:intergenic | 30.0% | |
| AAAGATCCAGATATCAATCA+GGG | + | chr2_2:47295300-47295319 | None:intergenic | 30.0% | |
| TAAAGATCCAGATATCAATC+AGG | + | chr2_2:47295301-47295320 | None:intergenic | 30.0% | |
| ! | GTGATTAAAGTATCATACTC+AGG | + | chr2_2:47295366-47295385 | None:intergenic | 30.0% |
| !! | TCTATTTCTGCAATGTCATA+TGG | + | chr2_2:47295411-47295430 | None:intergenic | 30.0% |
| AGAAATAGATGCTCTTATCT+TGG | - | chr2_2:47295422-47295441 | Msa0254350:intron | 30.0% | |
| GCTAGAGTTGAGTTAAATTA+GGG | + | chr2_2:47295783-47295802 | None:intergenic | 30.0% | |
| AGCTAGAGTTGAGTTAAATT+AGG | + | chr2_2:47295784-47295803 | None:intergenic | 30.0% | |
| CAAGTATATATGTTCCATCA+CGG | + | chr2_2:47295903-47295922 | None:intergenic | 30.0% | |
| ! | ATAATTTTCATCTGTTTCCG+AGG | + | chr2_2:47295969-47295988 | None:intergenic | 30.0% |
| !! | TTTTTAGGGAAGAGAATCAA+AGG | - | chr2_2:47296049-47296068 | Msa0254350:intron | 30.0% |
| !! | TCATTCATTTGTTGTCAAGT+CGG | - | chr2_2:47296162-47296181 | Msa0254350:intron | 30.0% |
| TTAGATGCATAGCTTACATT+AGG | + | chr2_2:47296217-47296236 | None:intergenic | 30.0% | |
| ! | AACATAGGTTGACTTCTATT+TGG | - | chr2_2:47296268-47296287 | Msa0254350:CDS | 30.0% |
| TGGGTCATTATTAAGAATGT+TGG | - | chr2_2:47296531-47296550 | Msa0254350:intron | 30.0% | |
| !! | TTGGCTTTTCAGCAATAAAT+GGG | + | chr2_2:47296558-47296577 | None:intergenic | 30.0% |
| TGGATAGTGTTCTATCATTT+CGG | - | chr2_2:47296615-47296634 | Msa0254350:intron | 30.0% | |
| CGGATAATGAAACCAATAAA+AGG | - | chr2_2:47296635-47296654 | Msa0254350:CDS | 30.0% | |
| GGAATTTAAATCAATGAGGA+AGG | + | chr2_2:47296686-47296705 | None:intergenic | 30.0% | |
| CTTCGGAATTTAAATCAATG+AGG | + | chr2_2:47296690-47296709 | None:intergenic | 30.0% | |
| ! | AATCTTGGTGAAAGCATAAT+TGG | - | chr2_2:47296869-47296888 | Msa0254350:intron | 30.0% |
| TACTTGCATGTATGAAATCA+CGG | - | chr2_2:47297168-47297187 | Msa0254350:intron | 30.0% | |
| ! | AGCTTTTCTTAAAATCATGG+TGG | + | chr2_2:47297224-47297243 | None:intergenic | 30.0% |
| !!! | GCTAGCTTTTCTTAAAATCA+TGG | + | chr2_2:47297227-47297246 | None:intergenic | 30.0% |
| !! | AAGCTAGCTTTAACAAAATC+AGG | - | chr2_2:47297239-47297258 | Msa0254350:intron | 30.0% |
| !! | AGCTAGCTTTAACAAAATCA+GGG | - | chr2_2:47297240-47297259 | Msa0254350:intron | 30.0% |
| AAAAATCCATTGTCCTTGTT+TGG | + | chr2_2:47297299-47297318 | None:intergenic | 30.0% | |
| TAATGTGAAAGTGATACCTT+TGG | - | chr2_2:47297319-47297338 | Msa0254350:intron | 30.0% | |
| AATGTGAAAGTGATACCTTT+GGG | - | chr2_2:47297320-47297339 | Msa0254350:intron | 30.0% | |
| CAGATATATGCAGATTAAGT+TGG | + | chr2_2:47297377-47297396 | None:intergenic | 30.0% | |
| CAACTTAATCTGCATATATC+TGG | - | chr2_2:47297375-47297394 | Msa0254350:intron | 30.0% | |
| CATTATTGAGCTGCAAAAAA+AGG | + | chr2_2:47297446-47297465 | None:intergenic | 30.0% | |
| CAACATCATCAACATATCAA+TGG | - | chr2_2:47297473-47297492 | Msa0254350:intron | 30.0% | |
| ! | AAATTTAGGGATGCAAGTTT+TGG | + | chr2_2:47297533-47297552 | None:intergenic | 30.0% |
| ! | AGTTTGTGTTACTGTAATCA+AGG | - | chr2_2:47297752-47297771 | Msa0254350:CDS | 30.0% |
| !!! | AGTTTTGGAGAGAGAGAATA+GGG | + | chr2_2:47290478-47290497 | None:intergenic | 35.0% |
| ! | GTTGGTGTAAATGTGAGTTT+TGG | + | chr2_2:47290493-47290512 | None:intergenic | 35.0% |
| ! | ATGTTAGGGTTTAAGGTTGT+TGG | + | chr2_2:47290511-47290530 | None:intergenic | 35.0% |
| TCAAGTGTTCAAGATGTTGT+CGG | - | chr2_2:47290577-47290596 | Msa0254350:three_prime_UTR | 35.0% | |
| !!! | GTTCTCCTATTTTGGTTACT+GGG | - | chr2_2:47290680-47290699 | Msa0254350:three_prime_UTR | 35.0% |
| !!! | ATTGTTGCTGCTTTTTTGCT+TGG | - | chr2_2:47290718-47290737 | Msa0254350:exon | 35.0% |
| ! | TTTTGCTTGGTACTCTTACT+TGG | - | chr2_2:47290731-47290750 | Msa0254350:exon | 35.0% |
| !! | GTTGGAGTTTTGTGAAATTG+GGG | - | chr2_2:47290903-47290922 | Msa0254350:intron | 35.0% |
| ! | GTTTTGTGAAATTGGGGAAA+TGG | - | chr2_2:47290909-47290928 | Msa0254350:intron | 35.0% |
| !!! | GTTTTGGTTGATTTGGTTTC+TGG | - | chr2_2:47290940-47290959 | Msa0254350:intron | 35.0% |
| !!! | TTGTTTTTGGGGTTTAGGAT+TGG | - | chr2_2:47291219-47291238 | Msa0254350:intron | 35.0% |
| !! | GGTTGATGCTTTTTGTACTT+TGG | - | chr2_2:47291423-47291442 | Msa0254350:CDS | 35.0% |
| !! | TACTTTGGAGTTGATTCGTT+TGG | - | chr2_2:47291438-47291457 | Msa0254350:CDS | 35.0% |
| !! | ACTTTGGAGTTGATTCGTTT+GGG | - | chr2_2:47291439-47291458 | Msa0254350:CDS | 35.0% |
| ! | ATTCGTTTGGGGTTTGTTTA+GGG | - | chr2_2:47291451-47291470 | Msa0254350:intron | 35.0% |
| AGTCAAAATGGCACAGAAAA+TGG | - | chr2_2:47291489-47291508 | Msa0254350:intron | 35.0% | |
| CTGAGAAAAGAAAAGGAAGA+AGG | - | chr2_2:47291524-47291543 | Msa0254350:intron | 35.0% | |
| GAGAAAAGAAAAGGAAGAAG+GGG | - | chr2_2:47291526-47291545 | Msa0254350:intron | 35.0% | |
| ! | TGTGCTTTCCTCACAATTTT+TGG | - | chr2_2:47291589-47291608 | Msa0254350:intron | 35.0% |
| !!! | TTCCTCACAATTTTTGGAGT+TGG | - | chr2_2:47291595-47291614 | Msa0254350:intron | 35.0% |
| !! | TAGATCAGTTGGTAAACTAG+GGG | + | chr2_2:47291777-47291796 | None:intergenic | 35.0% |
| !! | GTAGATCAGTTGGTAAACTA+GGG | + | chr2_2:47291778-47291797 | None:intergenic | 35.0% |
| !! | AGTAGATCAGTTGGTAAACT+AGG | + | chr2_2:47291779-47291798 | None:intergenic | 35.0% |
| AGGTTGCATTGTCCTTTATT+CGG | - | chr2_2:47292172-47292191 | Msa0254350:intron | 35.0% | |
| ! | GCGAGAAAATGCTTTATTAG+TGG | - | chr2_2:47292235-47292254 | Msa0254350:intron | 35.0% |
| TTGTTTGTTTCCCTAACAGT+TGG | - | chr2_2:47292391-47292410 | Msa0254350:intron | 35.0% | |
| ACTTACCTATCCAACTGTTA+GGG | + | chr2_2:47292404-47292423 | None:intergenic | 35.0% | |
| TACTTACCTATCCAACTGTT+AGG | + | chr2_2:47292405-47292424 | None:intergenic | 35.0% | |
| TATGGAGAGAGTAAATGTAG+AGG | - | chr2_2:47292496-47292515 | Msa0254350:intron | 35.0% | |
| AGAACAGTCAATGTAGAGTT+AGG | - | chr2_2:47292715-47292734 | Msa0254350:intron | 35.0% | |
| GAACAGTCAATGTAGAGTTA+GGG | - | chr2_2:47292716-47292735 | Msa0254350:intron | 35.0% | |
| AAACAGAGTAAGGATTTGTG+CGG | - | chr2_2:47292770-47292789 | Msa0254350:intron | 35.0% | |
| TAAAATGGGAGCCCTTAATA+TGG | - | chr2_2:47293022-47293041 | Msa0254350:intron | 35.0% | |
| GGCTTAAGAATTATGAGGAT+GGG | + | chr2_2:47293179-47293198 | None:intergenic | 35.0% | |
| AGAAAACCTCATACTTGTGT+TGG | - | chr2_2:47293365-47293384 | Msa0254350:intron | 35.0% | |
| AAGAATTGTAAATGGGAGTG+AGG | - | chr2_2:47293469-47293488 | Msa0254350:intron | 35.0% | |
| TGGTCGTGGATATTAAAGTT+TGG | + | chr2_2:47293511-47293530 | None:intergenic | 35.0% | |
| CAACCATTGAAATGGTTTCA+TGG | + | chr2_2:47293606-47293625 | None:intergenic | 35.0% | |
| CTTTCGTTCAACCATTGAAA+TGG | + | chr2_2:47293614-47293633 | None:intergenic | 35.0% | |
| GTAATAGGTTTCCTGCAAAT+AGG | - | chr2_2:47293680-47293699 | Msa0254350:intron | 35.0% | |
| CAGCATATATGGTCCATAAT+TGG | - | chr2_2:47293759-47293778 | Msa0254350:intron | 35.0% | |
| TTTATACAATCGGGCAACTT+GGG | + | chr2_2:47294533-47294552 | None:intergenic | 35.0% | |
| ! | TTTTATACAATCGGGCAACT+TGG | + | chr2_2:47294534-47294553 | None:intergenic | 35.0% |
| ! | TGGAGGCTTTTTATACAATC+GGG | + | chr2_2:47294542-47294561 | None:intergenic | 35.0% |
| ! | GTGGAGGCTTTTTATACAAT+CGG | + | chr2_2:47294543-47294562 | None:intergenic | 35.0% |
| AGATTGTGCTCATTTCACAT+CGG | + | chr2_2:47294648-47294667 | None:intergenic | 35.0% | |
| ! | GAAATGAGCACAATCTCTTT+TGG | - | chr2_2:47294652-47294671 | Msa0254350:intron | 35.0% |
| GTCAAGTCTATACCAACAAA+GGG | + | chr2_2:47294721-47294740 | None:intergenic | 35.0% | |
| AGTTCAACTCAAATCTAGTC+TGG | + | chr2_2:47294792-47294811 | None:intergenic | 35.0% | |
| !! | ATTTGAGTTGAACTGAGTTG+TGG | - | chr2_2:47294798-47294817 | Msa0254350:intron | 35.0% |
| CTGGTTTAACAGGTGTATTT+GGG | + | chr2_2:47294874-47294893 | None:intergenic | 35.0% | |
| ! | TCTGGTTTAACAGGTGTATT+TGG | + | chr2_2:47294875-47294894 | None:intergenic | 35.0% |
| AGAATCCCATAAATCCAATC+AGG | + | chr2_2:47294941-47294960 | None:intergenic | 35.0% | |
| ATTCCCTAATCTATAGGGAT+TGG | - | chr2_2:47294989-47295008 | Msa0254350:intron | 35.0% | |
| CTAACCAATCCCTATAGATT+AGG | + | chr2_2:47294996-47295015 | None:intergenic | 35.0% | |
| !! | CTAATCTATAGGGATTGGTT+AGG | - | chr2_2:47294994-47295013 | Msa0254350:intron | 35.0% |
| GCATTCTTGAATCTCCTATT+TGG | - | chr2_2:47295100-47295119 | Msa0254350:intron | 35.0% | |
| ATTGGTTAGGTTATGATCCA+TGG | - | chr2_2:47295143-47295162 | Msa0254350:intron | 35.0% | |
| !!! | TGTGCTTTCTCTTTTGGTTT+AGG | + | chr2_2:47295203-47295222 | None:intergenic | 35.0% |
| ! | AACGAATGTGCTTTCTCTTT+TGG | + | chr2_2:47295209-47295228 | None:intergenic | 35.0% |
| AATTGTACGGTTTCCTTTCT+TGG | + | chr2_2:47295252-47295271 | None:intergenic | 35.0% | |
| CGATATTCTTGAGGTGAAAA+TGG | + | chr2_2:47295332-47295351 | None:intergenic | 35.0% | |
| ACCTCAAGAATATCGTTGAA+GGG | - | chr2_2:47295337-47295356 | Msa0254350:intron | 35.0% | |
| ACACCAAGAGAATTCTACTT+GGG | + | chr2_2:47295471-47295490 | None:intergenic | 35.0% | |
| AGTACTTGACCCAAATTAAG+TGG | + | chr2_2:47295528-47295547 | None:intergenic | 35.0% | |
| AGTTTGTACAGCATTTAGCA+AGG | + | chr2_2:47295570-47295589 | None:intergenic | 35.0% | |
| TTATACTTCGGTCATGGAAA+AGG | - | chr2_2:47295640-47295659 | Msa0254350:intron | 35.0% | |
| GCATACTTAATATTGGAACG+AGG | + | chr2_2:47295719-47295738 | None:intergenic | 35.0% | |
| AGAATTGATACATTCCGTGA+TGG | - | chr2_2:47295886-47295905 | Msa0254350:intron | 35.0% | |
| AGCTATGCATCTAAACATTG+TGG | - | chr2_2:47296223-47296242 | Msa0254350:CDS | 35.0% | |
| ATTGTGGATCCTACAAATTG+AGG | - | chr2_2:47296239-47296258 | Msa0254350:CDS | 35.0% | |
| TTGTGGATCCTACAAATTGA+GGG | - | chr2_2:47296240-47296259 | Msa0254350:CDS | 35.0% | |
| ! | CTTCAGTTTGTTCAAATGGA+TGG | - | chr2_2:47296351-47296370 | Msa0254350:intron | 35.0% |
| CAGGTTCAACAAATTCAACT+GGG | + | chr2_2:47296486-47296505 | None:intergenic | 35.0% | |
| !!! | GTTGGCTTTTCAGCAATAAA+TGG | + | chr2_2:47296559-47296578 | None:intergenic | 35.0% |
| ACATACGGATGCTTATTTGT+TGG | + | chr2_2:47296577-47296596 | None:intergenic | 35.0% | |
| ! | GAAAGGTTCCATCCTTTTAT+TGG | + | chr2_2:47296650-47296669 | None:intergenic | 35.0% |
| TTCACCAAGATTAGCAAACT+GGG | + | chr2_2:47296861-47296880 | None:intergenic | 35.0% | |
| TTTCACCAAGATTAGCAAAC+TGG | + | chr2_2:47296862-47296881 | None:intergenic | 35.0% | |
| TACATGCAAGTAACACATGT+TGG | + | chr2_2:47297160-47297179 | None:intergenic | 35.0% | |
| AGTAAGACACTTCAACATCT+AGG | + | chr2_2:47297631-47297650 | None:intergenic | 35.0% | |
| TGAGATGTTGGAAGAGAAGA+GGG | + | chr2_2:47290447-47290466 | None:intergenic | 40.0% | |
| TTGAGATGTTGGAAGAGAAG+AGG | + | chr2_2:47290448-47290467 | None:intergenic | 40.0% | |
| ! | AGGGTTTGTGTTTGAGATGT+TGG | + | chr2_2:47290459-47290478 | None:intergenic | 40.0% |
| !!! | GAGTTTTGGAGAGAGAGAAT+AGG | + | chr2_2:47290479-47290498 | None:intergenic | 40.0% |
| GCGAAGAATGTTAGGGTTTA+AGG | + | chr2_2:47290518-47290537 | None:intergenic | 40.0% | |
| TAACAAAGAAGATTGCCACG+TGG | + | chr2_2:47290635-47290654 | None:intergenic | 40.0% | |
| ! | TGTGTTGGGTTCTCCTATTT+TGG | - | chr2_2:47290672-47290691 | Msa0254350:three_prime_UTR | 40.0% |
| !!! | GGTTCTCCTATTTTGGTTAC+TGG | - | chr2_2:47290679-47290698 | Msa0254350:three_prime_UTR | 40.0% |
| GACAACCCAGTAACCAAAAT+AGG | + | chr2_2:47290688-47290707 | None:intergenic | 40.0% | |
| ! | TTACTGGGTTGTCGTTTGAA+GGG | - | chr2_2:47290695-47290714 | Msa0254350:three_prime_UTR | 40.0% |
| !!! | TGTGGAGGTTTTGGTTGATT+TGG | - | chr2_2:47290933-47290952 | Msa0254350:intron | 40.0% |
| !! | CTTTGGAGTTGATTCGTTTG+GGG | - | chr2_2:47291440-47291459 | Msa0254350:CDS | 40.0% |
| ! | GATTCGTTTGGGGTTTGTTT+AGG | - | chr2_2:47291450-47291469 | Msa0254350:intron | 40.0% |
| AGCGGCAACAAAAGTCAAAA+TGG | - | chr2_2:47291477-47291496 | Msa0254350:intron | 40.0% | |
| ATGGCACAGAAAATGGAACA+AGG | - | chr2_2:47291496-47291515 | Msa0254350:intron | 40.0% | |
| TGGCACAGAAAATGGAACAA+GGG | - | chr2_2:47291497-47291516 | Msa0254350:intron | 40.0% | |
| CTCCAACTCCAAAAATTGTG+AGG | + | chr2_2:47291600-47291619 | None:intergenic | 40.0% | |
| !!! | CTCACAATTTTTGGAGTTGG+AGG | - | chr2_2:47291598-47291617 | Msa0254350:intron | 40.0% |
| !!! | AATTTTTGGAGTTGGAGGAG+CGG | - | chr2_2:47291603-47291622 | Msa0254350:intron | 40.0% |
| !!! | TTTTCTCAGCTTTGGAGACT+TGG | - | chr2_2:47291628-47291647 | Msa0254350:intron | 40.0% |
| !! | TTTCTCAGCTTTGGAGACTT+GGG | - | chr2_2:47291629-47291648 | Msa0254350:intron | 40.0% |
| TCTCAAGTCAGTAGATCAGT+TGG | + | chr2_2:47291788-47291807 | None:intergenic | 40.0% | |
| AAGCACACGGAACTTTACTA+AGG | + | chr2_2:47291942-47291961 | None:intergenic | 40.0% | |
| GTACCTAGTTACGTCATTCA+AGG | - | chr2_2:47291971-47291990 | Msa0254350:intron | 40.0% | |
| CTACCTTGAATGACGTAACT+AGG | + | chr2_2:47291977-47291996 | None:intergenic | 40.0% | |
| TCATTCAAGGTAGTTCCAAG+AGG | - | chr2_2:47291984-47292003 | Msa0254350:intron | 40.0% | |
| ! | TAGTTCCAAGAGGTACAGAA+GGG | - | chr2_2:47291994-47292013 | Msa0254350:intron | 40.0% |
| AGATGCTAAAATTCCAGCCA+AGG | + | chr2_2:47292039-47292058 | None:intergenic | 40.0% | |
| ! | TGCCTTTGTCAGTTTTCTTC+TGG | - | chr2_2:47292067-47292086 | Msa0254350:intron | 40.0% |
| ! | GCCTTTGTCAGTTTTCTTCT+GGG | - | chr2_2:47292068-47292087 | Msa0254350:intron | 40.0% |
| TTTATGGGATTACTGTGGGT+GGG | - | chr2_2:47292126-47292145 | Msa0254350:intron | 40.0% | |
| !! | GTGGGAAGAATGGATTAATG+AGG | - | chr2_2:47292144-47292163 | Msa0254350:intron | 40.0% |
| TGTTTCCCTAACAGTTGGAT+AGG | - | chr2_2:47292396-47292415 | Msa0254350:intron | 40.0% | |
| GGAAACCTCTTAAGGATCTT+TGG | - | chr2_2:47292574-47292593 | Msa0254350:intron | 40.0% | |
| !! | TGCGAAATTAAGTGCTGACA+GGG | - | chr2_2:47292744-47292763 | Msa0254350:intron | 40.0% |
| GACAGGGATAAAACAGAGTA+AGG | - | chr2_2:47292760-47292779 | Msa0254350:intron | 40.0% | |
| ATACTCCCCCAATAACATCA+AGG | - | chr2_2:47292957-47292976 | Msa0254350:intron | 40.0% | |
| ! | ATAAGGGGTACAGACTTTGT+AGG | - | chr2_2:47293085-47293104 | Msa0254350:intron | 40.0% |
| CGGCTTAAGAATTATGAGGA+TGG | + | chr2_2:47293180-47293199 | None:intergenic | 40.0% | |
| ACAGCGGCTTAAGAATTATG+AGG | + | chr2_2:47293184-47293203 | None:intergenic | 40.0% | |
| CTAGTACCAACACAAGTATG+AGG | + | chr2_2:47293374-47293393 | None:intergenic | 40.0% | |
| CTCACTCATAGATAGAAACC+AGG | - | chr2_2:47293572-47293591 | Msa0254350:intron | 40.0% | |
| TTGAAATGGTTTCATGGGTG+TGG | + | chr2_2:47293600-47293619 | None:intergenic | 40.0% | |
| CACCCATGAAACCATTTCAA+TGG | - | chr2_2:47293600-47293619 | Msa0254350:intron | 40.0% | |
| CTATAACCGGTCAGCATATA+TGG | - | chr2_2:47293748-47293767 | Msa0254350:intron | 40.0% | |
| TATGGACCATATATGCTGAC+CGG | + | chr2_2:47293757-47293776 | None:intergenic | 40.0% | |
| TTAAAACGGTGCCCCTAATA+TGG | + | chr2_2:47293801-47293820 | None:intergenic | 40.0% | |
| AACACTGATCCATACACTCA+GGG | + | chr2_2:47294566-47294585 | None:intergenic | 40.0% | |
| TAACACTGATCCATACACTC+AGG | + | chr2_2:47294567-47294586 | None:intergenic | 40.0% | |
| GCTGTACAAATTCCCTTTGT+TGG | - | chr2_2:47294706-47294725 | Msa0254350:intron | 40.0% | |
| GGTCAAGTCTATACCAACAA+AGG | + | chr2_2:47294722-47294741 | None:intergenic | 40.0% | |
| TGGTTCAGTTTAGTATCGTC+TGG | + | chr2_2:47294772-47294791 | None:intergenic | 40.0% | |
| ! | TTGCTCTGAGTCGTCTATTT+CGG | + | chr2_2:47294825-47294844 | None:intergenic | 40.0% |
| ! | TTGGTCTGATCTGGTTTAAC+AGG | + | chr2_2:47294884-47294903 | None:intergenic | 40.0% |
| !! | TGGTTTAGTTTGGTCTGATC+TGG | + | chr2_2:47294893-47294912 | None:intergenic | 40.0% |
| AGATCAGACCAAACTAAACC+AGG | - | chr2_2:47294892-47294911 | Msa0254350:intron | 40.0% | |
| ACCAAACTAAACCAGGTTGT+GGG | - | chr2_2:47294899-47294918 | Msa0254350:intron | 40.0% | |
| TTATGATCCATGGCTACTGT+GGG | - | chr2_2:47295153-47295172 | Msa0254350:intron | 40.0% | |
| AAACTGCTCAACACCAAGAA+AGG | - | chr2_2:47295236-47295255 | Msa0254350:intron | 40.0% | |
| TCAAAGCCCTGATTGATATC+TGG | - | chr2_2:47295291-47295310 | Msa0254350:intron | 40.0% | |
| CACCTCAAGAATATCGTTGA+AGG | - | chr2_2:47295336-47295355 | Msa0254350:intron | 40.0% | |
| AAGCCCAAGTAGAATTCTCT+TGG | - | chr2_2:47295465-47295484 | Msa0254350:intron | 40.0% | |
| GACACCAAGAGAATTCTACT+TGG | + | chr2_2:47295472-47295491 | None:intergenic | 40.0% | |
| GGTCAAGTACTAATTGCTAC+AGG | - | chr2_2:47295537-47295556 | Msa0254350:intron | 40.0% | |
| TTCACGTTATACTTCGGTCA+TGG | - | chr2_2:47295634-47295653 | Msa0254350:intron | 40.0% | |
| GGAATGTTTGTCTGATCAAG+AGG | - | chr2_2:47295679-47295698 | Msa0254350:intron | 40.0% | |
| ! | AGGATCATTAGCTGATTCCT+CGG | - | chr2_2:47295949-47295968 | Msa0254350:intron | 40.0% |
| ! | CCTTTTTACCCCCTATGTTA+CGG | + | chr2_2:47296190-47296209 | None:intergenic | 40.0% |
| GATCCTACAAATTGAGGGAA+GGG | - | chr2_2:47296245-47296264 | Msa0254350:CDS | 40.0% | |
| AAATTGAGGGAAGGGAACAT+AGG | - | chr2_2:47296253-47296272 | Msa0254350:CDS | 40.0% | |
| AACCAGATCAGAGATTGAAC+TGG | - | chr2_2:47296320-47296339 | Msa0254350:intron | 40.0% | |
| ! | CGTGCTTCAGTTTGTTCAAA+TGG | - | chr2_2:47296347-47296366 | Msa0254350:intron | 40.0% |
| !!! | CTGGGAAACGATTAGCTTTT+TGG | + | chr2_2:47296468-47296487 | None:intergenic | 40.0% |
| GCAGGTTCAACAAATTCAAC+TGG | + | chr2_2:47296487-47296506 | None:intergenic | 40.0% | |
| !! | GTTGAATTTGTTGAACCTGC+CGG | - | chr2_2:47296487-47296506 | Msa0254350:intron | 40.0% |
| AAGGAAAAACTGCTGTCGAA+AGG | + | chr2_2:47296667-47296686 | None:intergenic | 40.0% | |
| TGGTGCATCATTTCAAGAGA+AGG | - | chr2_2:47296889-47296908 | Msa0254350:intron | 40.0% | |
| GCATCATTTCAAGAGAAGGA+AGG | - | chr2_2:47296893-47296912 | Msa0254350:intron | 40.0% | |
| AAGAGAAGGAAGGATTTCGA+TGG | - | chr2_2:47296903-47296922 | Msa0254350:intron | 40.0% | |
| AGAGAAGGAAGGATTTCGAT+GGG | - | chr2_2:47296904-47296923 | Msa0254350:intron | 40.0% | |
| CAACATCAGATATGGTGAGA+TGG | + | chr2_2:47296986-47297005 | None:intergenic | 40.0% | |
| GAAATCGGCAACATCAGATA+TGG | + | chr2_2:47296994-47297013 | None:intergenic | 40.0% | |
| CACAAGCAGACAACTGAAAT+CGG | + | chr2_2:47297009-47297028 | None:intergenic | 40.0% | |
| TGCAAGTAACACATGTTGGT+AGG | + | chr2_2:47297156-47297175 | None:intergenic | 40.0% | |
| GCTTGACAGAATTACAGTGT+CGG | - | chr2_2:47297194-47297213 | Msa0254350:intron | 40.0% | |
| CAGTGTGTTTGACGAAATCA+CGG | + | chr2_2:47297271-47297290 | None:intergenic | 40.0% | |
| ACACACTGTCATTCCAAACA+AGG | - | chr2_2:47297283-47297302 | Msa0254350:intron | 40.0% | |
| GTCATTCCAAACAAGGACAA+TGG | - | chr2_2:47297290-47297309 | Msa0254350:intron | 40.0% | |
| TACCTTTGGGCTGAAAATGA+AGG | - | chr2_2:47297333-47297352 | Msa0254350:intron | 40.0% | |
| ! | ATCCTTCATTTTCAGCCCAA+AGG | + | chr2_2:47297338-47297357 | None:intergenic | 40.0% |
| GTCTCTTGTGTTGAAAGCAA+TGG | - | chr2_2:47297668-47297687 | Msa0254350:CDS | 40.0% | |
| TGCTGCTGCGAAGAATGTTA+GGG | + | chr2_2:47290525-47290544 | None:intergenic | 45.0% | |
| TTGCTGCTGCGAAGAATGTT+AGG | + | chr2_2:47290526-47290545 | None:intergenic | 45.0% | |
| AGTGTTCAAGATGTTGTCGG+AGG | - | chr2_2:47290580-47290599 | Msa0254350:three_prime_UTR | 45.0% | |
| AGATGTTGTCGGAGGAGTTA+TGG | - | chr2_2:47290588-47290607 | Msa0254350:three_prime_UTR | 45.0% | |
| AAAGAAGATTGCCACGTGGA+AGG | + | chr2_2:47290631-47290650 | None:intergenic | 45.0% | |
| ! | GTTACTGGGTTGTCGTTTGA+AGG | - | chr2_2:47290694-47290713 | Msa0254350:three_prime_UTR | 45.0% |
| ! | ACTCTTACTTGGCGTGCTTT+TGG | - | chr2_2:47290742-47290761 | Msa0254350:CDS | 45.0% |
| TGAAATTGGGGAAATGGGTG+TGG | - | chr2_2:47290915-47290934 | Msa0254350:intron | 45.0% | |
| GGCACAGAAAATGGAACAAG+GGG | - | chr2_2:47291498-47291517 | Msa0254350:intron | 45.0% | |
| GGGGTTGCTGAGAAAAGAAA+AGG | - | chr2_2:47291517-47291536 | Msa0254350:intron | 45.0% | |
| ! | TGAGACTGTGTCACTCAACT+TGG | + | chr2_2:47291674-47291693 | None:intergenic | 45.0% |
| GACACAGTCTCAAGTGAGAT+CGG | - | chr2_2:47291682-47291701 | Msa0254350:intron | 45.0% | |
| AGTGAGATCGGCAAAGCATA+TGG | - | chr2_2:47291694-47291713 | Msa0254350:intron | 45.0% | |
| GTACCTGGACATTAAGCACA+CGG | + | chr2_2:47291955-47291974 | None:intergenic | 45.0% | |
| GAATGACGTAACTAGGTACC+TGG | + | chr2_2:47291970-47291989 | None:intergenic | 45.0% | |
| ! | GTAGTTCCAAGAGGTACAGA+AGG | - | chr2_2:47291993-47292012 | Msa0254350:intron | 45.0% |
| ! | AGTTCCAAGAGGTACAGAAG+GGG | - | chr2_2:47291995-47292014 | Msa0254350:intron | 45.0% |
| ! | GGTTAGTGTTGAAGGAACCT+TGG | - | chr2_2:47292019-47292038 | Msa0254350:intron | 45.0% |
| GCCCAGAAGAAAACTGACAA+AGG | + | chr2_2:47292072-47292091 | None:intergenic | 45.0% | |
| GTTTATGGGATTACTGTGGG+TGG | - | chr2_2:47292125-47292144 | Msa0254350:intron | 45.0% | |
| ATTACTGTGGGTGGGAAGAA+TGG | - | chr2_2:47292134-47292153 | Msa0254350:intron | 45.0% | |
| TGGACAGTGGAAACCTCTTA+AGG | - | chr2_2:47292566-47292585 | Msa0254350:intron | 45.0% | |
| ACCTCTTAAGGATCTTTGGC+TGG | - | chr2_2:47292578-47292597 | Msa0254350:intron | 45.0% | |
| ACCAGCCAAAGATCCTTAAG+AGG | + | chr2_2:47292582-47292601 | None:intergenic | 45.0% | |
| CTTTGCAGCTCAAATCCCTA+AGG | + | chr2_2:47292622-47292641 | None:intergenic | 45.0% | |
| AGGGATTTGAGCTGCAAAGT+AGG | - | chr2_2:47292623-47292642 | Msa0254350:intron | 45.0% | |
| GGGATTTGAGCTGCAAAGTA+GGG | - | chr2_2:47292624-47292643 | Msa0254350:intron | 45.0% | |
| AACTTTGCAACTATCTGCGC+AGG | + | chr2_2:47292682-47292701 | None:intergenic | 45.0% | |
| TGCGCAGATAGTTGCAAAGT+TGG | - | chr2_2:47292681-47292700 | Msa0254350:intron | 45.0% | |
| GCGCAGATAGTTGCAAAGTT+GGG | - | chr2_2:47292682-47292701 | Msa0254350:intron | 45.0% | |
| CAGATAGTTGCAAAGTTGGG+TGG | - | chr2_2:47292685-47292704 | Msa0254350:intron | 45.0% | |
| !! | CTGCGAAATTAAGTGCTGAC+AGG | - | chr2_2:47292743-47292762 | Msa0254350:intron | 45.0% |
| AGAGTAAGGATTTGTGCGGT+GGG | - | chr2_2:47292774-47292793 | Msa0254350:intron | 45.0% | |
| GTGTGCGTTTGCGTTTGTAT+GGG | - | chr2_2:47292796-47292815 | Msa0254350:intron | 45.0% | |
| TGTGCGTTTGCGTTTGTATG+GGG | - | chr2_2:47292797-47292816 | Msa0254350:intron | 45.0% | |
| TTTGCGTTTGTATGGGGGTT+GGG | - | chr2_2:47292803-47292822 | Msa0254350:intron | 45.0% | |
| AAGTCTGTACCCCTTATAGC+TGG | + | chr2_2:47293082-47293101 | None:intergenic | 45.0% | |
| ACCACAACCAAGTAAGGAGA+TGG | - | chr2_2:47293527-47293546 | Msa0254350:intron | 45.0% | |
| TCCATCTCCTTACTTGGTTG+TGG | + | chr2_2:47293531-47293550 | None:intergenic | 45.0% | |
| ACAACCAAGTAAGGAGATGG+AGG | - | chr2_2:47293530-47293549 | Msa0254350:intron | 45.0% | |
| CAAACCTCCATCTCCTTACT+TGG | + | chr2_2:47293537-47293556 | None:intergenic | 45.0% | |
| AGTAAGGAGATGGAGGTTTG+TGG | - | chr2_2:47293537-47293556 | Msa0254350:intron | 45.0% | |
| GTAAGGAGATGGAGGTTTGT+GGG | - | chr2_2:47293538-47293557 | Msa0254350:intron | 45.0% | |
| ACACTGATCCATACACTCAG+GGG | + | chr2_2:47294565-47294584 | None:intergenic | 45.0% | |
| TGCTCATTTCACATCGGACT+TGG | + | chr2_2:47294642-47294661 | None:intergenic | 45.0% | |
| AACAAAGCGAACAGCGATTC+AGG | + | chr2_2:47294679-47294698 | None:intergenic | 45.0% | |
| TGGTATAGACTTGACCATCC+CGG | - | chr2_2:47294726-47294745 | Msa0254350:intron | 45.0% | |
| TGGTCTGGTCAGCTCTTATT+CGG | + | chr2_2:47294752-47294771 | None:intergenic | 45.0% | |
| CAGTTTAGTATCGTCTGGTC+TGG | + | chr2_2:47294767-47294786 | None:intergenic | 45.0% | |
| GACCAAACTAAACCAGGTTG+TGG | - | chr2_2:47294898-47294917 | Msa0254350:intron | 45.0% | |
| GTTATGATCCATGGCTACTG+TGG | - | chr2_2:47295152-47295171 | Msa0254350:intron | 45.0% | |
| ! | ATTTTCTCCCACAGTAGCCA+TGG | + | chr2_2:47295163-47295182 | None:intergenic | 45.0% |
| GCCCTTCAACGATATTCTTG+AGG | + | chr2_2:47295341-47295360 | None:intergenic | 45.0% | |
| TGCTTCTTCTCGCTTTAACG+CGG | - | chr2_2:47295605-47295624 | Msa0254350:intron | 45.0% | |
| GGTCATGGAAAAGGTTCATG+TGG | - | chr2_2:47295649-47295668 | Msa0254350:intron | 45.0% | |
| AAAGGTTCATGTGGTTGCAG+TGG | - | chr2_2:47295658-47295677 | Msa0254350:intron | 45.0% | |
| ! | GTCTGATCAAGAGGTACAAG+AGG | - | chr2_2:47295688-47295707 | Msa0254350:intron | 45.0% |
| AATTAGGGTCACACGATGAC+AGG | + | chr2_2:47295768-47295787 | None:intergenic | 45.0% | |
| TCAAGTCGGAACCGTAACAT+AGG | - | chr2_2:47296176-47296195 | Msa0254350:intron | 45.0% | |
| CAAGTCGGAACCGTAACATA+GGG | - | chr2_2:47296177-47296196 | Msa0254350:intron | 45.0% | |
| AAGTCGGAACCGTAACATAG+GGG | - | chr2_2:47296178-47296197 | Msa0254350:intron | 45.0% | |
| CCGTAACATAGGGGGTAAAA+AGG | - | chr2_2:47296187-47296206 | Msa0254350:intron | 45.0% | |
| GGATCCTACAAATTGAGGGA+AGG | - | chr2_2:47296244-47296263 | Msa0254350:CDS | 45.0% | |
| GTTCCCTTCCCTCAATTTGT+AGG | + | chr2_2:47296251-47296270 | None:intergenic | 45.0% | |
| TGCCAGTTCAATCTCTGATC+TGG | + | chr2_2:47296325-47296344 | None:intergenic | 45.0% | |
| TGAATTGTGGGTGGTTCAAC+TGG | + | chr2_2:47296429-47296448 | None:intergenic | 45.0% | |
| ! | ATTTGTTGAACCTGCCGGTT+TGG | - | chr2_2:47296492-47296511 | Msa0254350:intron | 45.0% |
| AAAAACTAGACCAAACCGGC+AGG | + | chr2_2:47296505-47296524 | None:intergenic | 45.0% | |
| TGTGTTTGACGAAATCACGG+TGG | + | chr2_2:47297268-47297287 | None:intergenic | 45.0% | |
| !!! | ATTTTATTATTTAATTTCTA+GGG | + | chr2_2:47292292-47292311 | None:intergenic | 5.0% |
| !!! | AATTTTATTATTTAATTTCT+AGG | + | chr2_2:47292293-47292312 | None:intergenic | 5.0% |
| !!! | TTTTATAATTTTATTTAAGA+TGG | - | chr2_2:47292546-47292565 | Msa0254350:intron | 5.0% |
| !! | TGAATATAAAAATATTAAAT+TGG | - | chr2_2:47293725-47293744 | Msa0254350:intron | 5.0% |
| !!! | TTATTTTTTTAATACATTTT+TGG | + | chr2_2:47296396-47296415 | None:intergenic | 5.0% |
| !!! | TTTATTTTTTAATTGTTTTT+TGG | - | chr2_2:47296946-47296965 | Msa0254350:intron | 5.0% |
| !!! | TTATTTTTTAATTGTTTTTT+GGG | - | chr2_2:47296947-47296966 | Msa0254350:intron | 5.0% |
| ! | AGAGAAGAGGGAGAGAGTGT+GGG | + | chr2_2:47290435-47290454 | None:intergenic | 50.0% |
| AAGAGAAGAGGGAGAGAGTG+TGG | + | chr2_2:47290436-47290455 | None:intergenic | 50.0% | |
| TCCAATCATCACCTTCCACG+TGG | - | chr2_2:47290617-47290636 | Msa0254350:three_prime_UTR | 50.0% | |
| ! | CTTACTTGGCGTGCTTTTGG+TGG | - | chr2_2:47290745-47290764 | Msa0254350:CDS | 50.0% |
| AATTGGGGAAATGGGTGTGG+AGG | - | chr2_2:47290918-47290937 | Msa0254350:intron | 50.0% | |
| ! | GGAAATGGGTGTGGAGGTTT+TGG | - | chr2_2:47290924-47290943 | Msa0254350:intron | 50.0% |
| ! | GGGGTTTGTTTAGGGTACAG+CGG | - | chr2_2:47291459-47291478 | Msa0254350:intron | 50.0% |
| AGAAAAGGAAGAAGGGGTCC+AGG | - | chr2_2:47291532-47291551 | Msa0254350:intron | 50.0% | |
| GAAAAGGAAGAAGGGGTCCA+GGG | - | chr2_2:47291533-47291552 | Msa0254350:intron | 50.0% | |
| CTGGATCCAATTACACTCCC+TGG | + | chr2_2:47291553-47291572 | None:intergenic | 50.0% | |
| GTAATTGGATCCAGTGCTGC+CGG | - | chr2_2:47291559-47291578 | Msa0254350:intron | 50.0% | |
| ! | GAGGAAAGCACAAACGCAAC+CGG | + | chr2_2:47291581-47291600 | None:intergenic | 50.0% |
| !! | GAGCGGCTTTTTCTCAGCTT+TGG | - | chr2_2:47291620-47291639 | Msa0254350:intron | 50.0% |
| GGTAAACTAGGGGACATCGA+AGG | + | chr2_2:47291767-47291786 | None:intergenic | 50.0% | |
| GTTCCGTGTGCTTAATGTCC+AGG | - | chr2_2:47291949-47291968 | Msa0254350:intron | 50.0% | |
| ! | AGTGTTGAAGGAACCTTGGC+TGG | - | chr2_2:47292023-47292042 | Msa0254350:intron | 50.0% |
| ! | TGTCAGTTTTCTTCTGGGCG+AGG | - | chr2_2:47292073-47292092 | Msa0254350:intron | 50.0% |
| CAGAGTAAGGATTTGTGCGG+TGG | - | chr2_2:47292773-47292792 | Msa0254350:intron | 50.0% | |
| GGTGTGCGTTTGCGTTTGTA+TGG | - | chr2_2:47292795-47292814 | Msa0254350:intron | 50.0% | |
| GTGCGTTTGCGTTTGTATGG+GGG | - | chr2_2:47292798-47292817 | Msa0254350:intron | 50.0% | |
| GTTTGCGTTTGTATGGGGGT+TGG | - | chr2_2:47292802-47292821 | Msa0254350:intron | 50.0% | |
| GGGTACAGACTTTGTAGGAC+CGG | - | chr2_2:47293090-47293109 | Msa0254350:intron | 50.0% | |
| ! | TGTGTTGGTACTAGCTGCGA+TGG | - | chr2_2:47293380-47293399 | Msa0254350:intron | 50.0% |
| TCCACGACCACAACCAAGTA+AGG | - | chr2_2:47293521-47293540 | Msa0254350:intron | 50.0% | |
| TCCTTACTTGGTTGTGGTCG+TGG | + | chr2_2:47293525-47293544 | None:intergenic | 50.0% | |
| AGAGCAAACTGAACTGAGCC+AGG | - | chr2_2:47294838-47294857 | Msa0254350:intron | 50.0% | |
| CAAACTGAACTGAGCCAGGT+CGG | - | chr2_2:47294842-47294861 | Msa0254350:intron | 50.0% | |
| ! | TATTTGGGTTCTGTCCGACC+TGG | + | chr2_2:47294859-47294878 | None:intergenic | 50.0% |
| GCCCACAACCTGGTTTAGTT+TGG | + | chr2_2:47294903-47294922 | None:intergenic | 50.0% | |
| ATCTGATATGGCCCACAACC+TGG | + | chr2_2:47294913-47294932 | None:intergenic | 50.0% | |
| TCCATGTATTGCCAAGCTGC+AGG | + | chr2_2:47295838-47295857 | None:intergenic | 50.0% | |
| GCAGCTTGGCAATACATGGA+AGG | - | chr2_2:47295838-47295857 | Msa0254350:intron | 50.0% | |
| AGTCGGAACCGTAACATAGG+GGG | - | chr2_2:47296179-47296198 | Msa0254350:intron | 50.0% | |
| !! | GCTGCCCAGTTTGCTAATCT+TGG | - | chr2_2:47296854-47296873 | Msa0254350:intron | 50.0% |
| GCCACGTGGAAGGTGATGAT+TGG | + | chr2_2:47290621-47290640 | None:intergenic | 55.0% | |
| !!! | TGGCGTGCTTTTGGTGGTGA+TGG | - | chr2_2:47290751-47290770 | Msa0254350:CDS | 55.0% |
| ! | AGGGGTCCAGGGAGTGTAAT+TGG | - | chr2_2:47291544-47291563 | Msa0254350:intron | 55.0% |
| ! | TCCAAGAGGTACAGAAGGGG+CGG | - | chr2_2:47291998-47292017 | Msa0254350:intron | 55.0% |
| ! | GAAGGGGCGGTTAGTGTTGA+AGG | - | chr2_2:47292011-47292030 | Msa0254350:intron | 55.0% |
| GGTTTCATGGGTGTGGTTCC+TGG | + | chr2_2:47293593-47293612 | None:intergenic | 55.0% | |
| ATCCATACACTCAGGGGTGG+AGG | + | chr2_2:47294559-47294578 | None:intergenic | 55.0% | |
| CTGATCCATACACTCAGGGG+TGG | + | chr2_2:47294562-47294581 | None:intergenic | 55.0% | |
| TGGTCAGCTCTTATTCGGCC+GGG | + | chr2_2:47294747-47294766 | None:intergenic | 55.0% | |
| CTGGTCAGCTCTTATTCGGC+CGG | + | chr2_2:47294748-47294767 | None:intergenic | 55.0% | |
| GTCACACGATGACAGGACAC+AGG | + | chr2_2:47295761-47295780 | None:intergenic | 55.0% | |
| CACCATTTCAGCCTGCAGCT+TGG | - | chr2_2:47295824-47295843 | Msa0254350:intron | 55.0% | |
| TGCCAAGCTGCAGGCTGAAA+TGG | + | chr2_2:47295829-47295848 | None:intergenic | 55.0% | |
| GCCTGCAGCTTGGCAATACA+TGG | - | chr2_2:47295834-47295853 | Msa0254350:intron | 55.0% | |
| CAAGCAGAAGAGCTGAGCTG+AGG | - | chr2_2:47295929-47295948 | Msa0254350:intron | 55.0% | |
| ACAAACGCAACCGGCAGCAC+TGG | + | chr2_2:47291572-47291591 | None:intergenic | 60.0% | |
| ACCGCCCCTTCTGTACCTCT+TGG | + | chr2_2:47292002-47292021 | None:intergenic | 60.0% | |
| AGCCTCCACCCCTGAGTGTA+TGG | - | chr2_2:47294554-47294573 | Msa0254350:intron | 60.0% | |
| CAGCTCTTATTCGGCCGGGA+TGG | + | chr2_2:47294743-47294762 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 47290400 | 47297884 | 47290400 | ID=Msa0254350;Name=Msa0254350 |
| chr2_2 | mRNA | 47290400 | 47297884 | 47290400 | ID=Msa0254350-mRNA-1;Parent=Msa0254350;Name=Msa0254350-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.6|0.5|1|0.6|0.66|6|336|298 |
| chr2_2 | exon | 47290400 | 47290828 | 47290400 | ID=Msa0254350-mRNA-1:exon:14425;Parent=Msa0254350-mRNA-1 |
| chr2_2 | exon | 47291359 | 47291463 | 47291359 | ID=Msa0254350-mRNA-1:exon:14424;Parent=Msa0254350-mRNA-1 |
| chr2_2 | exon | 47296190 | 47296313 | 47296190 | ID=Msa0254350-mRNA-1:exon:14423;Parent=Msa0254350-mRNA-1 |
| chr2_2 | exon | 47296634 | 47296812 | 47296634 | ID=Msa0254350-mRNA-1:exon:14422;Parent=Msa0254350-mRNA-1 |
| chr2_2 | exon | 47297480 | 47297694 | 47297480 | ID=Msa0254350-mRNA-1:exon:14421;Parent=Msa0254350-mRNA-1 |
| chr2_2 | exon | 47297704 | 47297884 | 47297704 | ID=Msa0254350-mRNA-1:exon:14420;Parent=Msa0254350-mRNA-1 |
| chr2_2 | CDS | 47297704 | 47297884 | 47297704 | ID=Msa0254350-mRNA-1:cds;Parent=Msa0254350-mRNA-1 |
| chr2_2 | CDS | 47297480 | 47297694 | 47297480 | ID=Msa0254350-mRNA-1:cds;Parent=Msa0254350-mRNA-1 |
| chr2_2 | CDS | 47296634 | 47296812 | 47296634 | ID=Msa0254350-mRNA-1:cds;Parent=Msa0254350-mRNA-1 |
| chr2_2 | CDS | 47296190 | 47296313 | 47296190 | ID=Msa0254350-mRNA-1:cds;Parent=Msa0254350-mRNA-1 |
| chr2_2 | CDS | 47291359 | 47291463 | 47291359 | ID=Msa0254350-mRNA-1:cds;Parent=Msa0254350-mRNA-1 |
| chr2_2 | CDS | 47290736 | 47290828 | 47290736 | ID=Msa0254350-mRNA-1:cds;Parent=Msa0254350-mRNA-1 |
| chr2_2 | three_prime_UTR | 47290400 | 47290735 | 47290400 | ID=Msa0254350-mRNA-1:three_prime_utr;Parent=Msa0254350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
