Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258040 | XP_003596717.1 | 95.912 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258040 | sp|Q9FLC0|PER52_ARATH | 62.752 | 298 | 108 | 2 | 23 | 318 | 28 | 324 | 1.37e-133 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258040 | G7IM82 | 95.912 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 0.0 | 624 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0047640 | Msa0258040 | 0.815942 | 7.138196e-52 | -8.615850e-47 |
| Msa0218040 | Msa0258040 | 0.879469 | 1.215070e-69 | -8.615850e-47 |
| Msa0249360 | Msa0258040 | 0.803025 | 4.244284e-49 | -8.615850e-47 |
| Msa0258040 | Msa0279850 | 0.802763 | 4.807918e-49 | -8.615850e-47 |
| Msa0258040 | Msa0287850 | 0.801876 | 7.320381e-49 | -8.615850e-47 |
| Msa0258040 | Msa0301520 | 0.830051 | 3.650813e-55 | -8.615850e-47 |
| Msa0258040 | Msa0304570 | 0.807266 | 5.496251e-50 | -8.615850e-47 |
| Msa0258040 | Msa0328730 | 0.810292 | 1.239211e-50 | -8.615850e-47 |
| Msa0258040 | Msa0335360 | 0.882221 | 1.249521e-70 | -8.615850e-47 |
| Msa0258040 | Msa0339020 | 0.807168 | 5.766166e-50 | -8.615850e-47 |
| Msa0258040 | Msa0361910 | 0.801728 | 7.850463e-49 | -8.615850e-47 |
| Msa0258040 | Msa0372930 | 0.802702 | 4.948128e-49 | -8.615850e-47 |
| Msa0258040 | Msa0378350 | 0.817487 | 3.214965e-52 | -8.615850e-47 |
| Msa0258040 | Msa0417970 | 0.800526 | 1.382720e-48 | -8.615850e-47 |
| Msa0258040 | Msa0427700 | 0.853447 | 2.375456e-61 | -8.615850e-47 |
| Msa0258040 | Msa0489120 | 0.804928 | 1.706580e-49 | -8.615850e-47 |
| Msa0258040 | Msa0544730 | 0.815976 | 7.014475e-52 | -8.615850e-47 |
| Msa0258040 | Msa0572750 | 0.811876 | 5.622897e-51 | -8.615850e-47 |
| Msa0258040 | Msa0586450 | 0.816194 | 6.270531e-52 | -8.615850e-47 |
| Msa0258040 | Msa0597770 | 0.803715 | 3.053484e-49 | -8.615850e-47 |
| Msa0258040 | Msa0608270 | 0.816044 | 6.773355e-52 | -8.615850e-47 |
| Msa0258040 | Msa0626270 | 0.842532 | 2.441656e-58 | -8.615850e-47 |
| Msa0258040 | Msa0626460 | 0.829975 | 3.809135e-55 | -8.615850e-47 |
| Msa0258040 | Msa0648830 | 0.819492 | 1.129174e-52 | -8.615850e-47 |
| Msa0258040 | Msa0664540 | 0.825055 | 5.775139e-54 | -8.615850e-47 |
| Msa0258040 | Msa0698100 | 0.806111 | 9.640223e-50 | -8.615850e-47 |
| Msa0258040 | Msa0968360 | 0.840865 | 6.721756e-58 | -8.615850e-47 |
| Msa0258040 | Msa1031390 | 0.826598 | 2.484164e-54 | -8.615850e-47 |
| Msa0258040 | Msa1055200 | 0.809396 | 1.931923e-50 | -8.615850e-47 |
| Msa0258040 | Msa1078940 | 0.819827 | 9.467437e-53 | -8.615850e-47 |
| Msa0258040 | Msa1123940 | 0.825636 | 4.208301e-54 | -8.615850e-47 |
| Msa0258040 | Msa1161480 | 0.806174 | 9.350269e-50 | -8.615850e-47 |
| Msa0258040 | Msa1165090 | 0.807004 | 6.245418e-50 | -8.615850e-47 |
| Msa0258040 | Msa1169220 | 0.861844 | 7.711332e-64 | -8.615850e-47 |
| Msa0258040 | Msa1169660 | 0.802758 | 4.819451e-49 | -8.615850e-47 |
| Msa0258040 | Msa1207330 | 0.804681 | 1.922444e-49 | -8.615850e-47 |
| Msa0258040 | Msa1292020 | 0.810636 | 1.044631e-50 | -8.615850e-47 |
| Msa0258040 | Msa1327870 | 0.817914 | 2.575380e-52 | -8.615850e-47 |
| Msa0258040 | Msa1382710 | 0.871730 | 5.468029e-67 | -8.615850e-47 |
| Msa0258040 | Msa1426080 | 0.809512 | 1.824345e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258040 | MtrunA17_Chr2g0320061 | 95.912 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 0.0 | 624 |
| Msa0258040 | MtrunA17_Chr2g0320051 | 90.881 | 318 | 29 | 0 | 1 | 318 | 1 | 318 | 0.0 | 592 |
| Msa0258040 | MtrunA17_Chr2g0320031 | 82.759 | 319 | 54 | 1 | 1 | 318 | 1 | 319 | 0.0 | 547 |
| Msa0258040 | MtrunA17_Chr2g0320071 | 84.277 | 318 | 49 | 1 | 1 | 318 | 1 | 317 | 0.0 | 544 |
| Msa0258040 | MtrunA17_Chr2g0320101 | 83.962 | 318 | 50 | 1 | 1 | 318 | 1 | 317 | 0.0 | 544 |
| Msa0258040 | MtrunA17_Chr2g0320091 | 77.116 | 319 | 71 | 2 | 1 | 318 | 1 | 318 | 1.10e-177 | 494 |
| Msa0258040 | MtrunA17_Chr3g0129051 | 67.419 | 310 | 98 | 3 | 11 | 318 | 14 | 322 | 2.81e-146 | 414 |
| Msa0258040 | MtrunA17_Chr3g0129061 | 65.944 | 323 | 104 | 5 | 1 | 318 | 1 | 322 | 8.60e-141 | 400 |
| Msa0258040 | MtrunA17_Chr3g0129041 | 65.325 | 323 | 106 | 4 | 1 | 318 | 1 | 322 | 3.55e-138 | 394 |
| Msa0258040 | MtrunA17_Chr7g0244461 | 59.032 | 310 | 126 | 1 | 9 | 318 | 4 | 312 | 3.45e-135 | 386 |
| Msa0258040 | MtrunA17_Chr5g0438021 | 60.952 | 315 | 119 | 4 | 7 | 318 | 12 | 325 | 2.43e-133 | 382 |
| Msa0258040 | MtrunA17_Chr7g0244451 | 59.122 | 296 | 120 | 1 | 23 | 318 | 22 | 316 | 2.62e-128 | 369 |
| Msa0258040 | MtrunA17_Chr3g0106921 | 54.829 | 321 | 141 | 3 | 1 | 318 | 1 | 320 | 4.24e-126 | 363 |
| Msa0258040 | MtrunA17_Chr1g0213061 | 55.625 | 320 | 139 | 2 | 1 | 318 | 3 | 321 | 9.48e-124 | 357 |
| Msa0258040 | MtrunA17_Chr3g0114451 | 55.449 | 312 | 138 | 1 | 7 | 318 | 8 | 318 | 1.02e-119 | 347 |
| Msa0258040 | MtrunA17_Chr4g0013171 | 55.414 | 314 | 137 | 3 | 7 | 318 | 9 | 321 | 2.54e-119 | 346 |
| Msa0258040 | MtrunA17_Chr3g0106901 | 58.333 | 312 | 127 | 2 | 7 | 318 | 15 | 323 | 3.20e-119 | 346 |
| Msa0258040 | MtrunA17_Chr5g0432441 | 54.747 | 316 | 138 | 3 | 7 | 318 | 12 | 326 | 7.20e-117 | 340 |
| Msa0258040 | MtrunA17_Chr7g0224371 | 53.968 | 315 | 141 | 4 | 6 | 318 | 10 | 322 | 1.51e-116 | 339 |
| Msa0258040 | MtrunA17_Chr5g0432351 | 55.660 | 318 | 130 | 6 | 7 | 318 | 9 | 321 | 8.55e-116 | 337 |
| Msa0258040 | MtrunA17_Chr5g0432341 | 55.975 | 318 | 129 | 6 | 7 | 318 | 9 | 321 | 2.55e-115 | 336 |
| Msa0258040 | MtrunA17_Chr4g0038171 | 54.045 | 309 | 138 | 2 | 14 | 318 | 13 | 321 | 1.17e-114 | 334 |
| Msa0258040 | MtrunA17_Chr4g0013201 | 52.941 | 306 | 143 | 1 | 13 | 318 | 34 | 338 | 1.24e-114 | 335 |
| Msa0258040 | MtrunA17_Chr4g0043391 | 53.651 | 315 | 140 | 3 | 8 | 318 | 12 | 324 | 2.41e-114 | 333 |
| Msa0258040 | MtrunA17_Chr4g0013181 | 55.631 | 293 | 127 | 3 | 28 | 318 | 62 | 353 | 8.11e-113 | 330 |
| Msa0258040 | MtrunA17_Chr5g0404721 | 52.492 | 301 | 136 | 1 | 25 | 318 | 30 | 330 | 1.63e-112 | 329 |
| Msa0258040 | MtrunA17_Chr5g0432331 | 53.797 | 316 | 140 | 5 | 7 | 318 | 39 | 352 | 5.11e-112 | 328 |
| Msa0258040 | MtrunA17_Chr3g0107881 | 50.470 | 319 | 154 | 3 | 4 | 318 | 6 | 324 | 7.40e-112 | 327 |
| Msa0258040 | MtrunA17_Chr4g0038161 | 54.485 | 301 | 132 | 3 | 22 | 318 | 21 | 320 | 1.53e-110 | 323 |
| Msa0258040 | MtrunA17_Chr4g0038151 | 51.724 | 319 | 147 | 4 | 4 | 318 | 6 | 321 | 2.82e-110 | 323 |
| Msa0258040 | MtrunA17_Chr4g0013191 | 53.333 | 300 | 136 | 3 | 22 | 318 | 42 | 340 | 2.18e-109 | 321 |
| Msa0258040 | MtrunA17_Chr8g0372601 | 50.831 | 301 | 141 | 1 | 25 | 318 | 30 | 330 | 1.15e-107 | 317 |
| Msa0258040 | MtrunA17_Chr5g0402581 | 51.402 | 321 | 146 | 4 | 6 | 318 | 8 | 326 | 9.50e-107 | 314 |
| Msa0258040 | MtrunA17_Chr5g0402571 | 51.250 | 320 | 146 | 4 | 7 | 318 | 9 | 326 | 8.22e-106 | 311 |
| Msa0258040 | MtrunA17_Chr1g0175561 | 48.758 | 322 | 154 | 4 | 6 | 318 | 7 | 326 | 5.24e-105 | 310 |
| Msa0258040 | MtrunA17_Chr1g0155611 | 51.325 | 302 | 139 | 2 | 25 | 318 | 46 | 347 | 1.32e-100 | 299 |
| Msa0258040 | MtrunA17_Chr7g0258811 | 47.059 | 323 | 161 | 4 | 6 | 318 | 49 | 371 | 2.08e-100 | 300 |
| Msa0258040 | MtrunA17_Chr2g0299691 | 49.226 | 323 | 150 | 4 | 8 | 318 | 38 | 358 | 2.35e-100 | 299 |
| Msa0258040 | MtrunA17_Chr4g0070951 | 48.287 | 321 | 153 | 4 | 8 | 318 | 12 | 329 | 7.81e-100 | 296 |
| Msa0258040 | MtrunA17_Chr2g0292211 | 46.875 | 320 | 162 | 2 | 7 | 318 | 22 | 341 | 5.54e-99 | 296 |
| Msa0258040 | MtrunA17_Chr2g0292151 | 47.883 | 307 | 152 | 2 | 20 | 318 | 24 | 330 | 8.67e-97 | 290 |
| Msa0258040 | MtrunA17_Chr2g0292271 | 47.712 | 306 | 152 | 2 | 21 | 318 | 25 | 330 | 1.56e-96 | 289 |
| Msa0258040 | MtrunA17_Chr4g0068621 | 45.399 | 326 | 163 | 2 | 8 | 318 | 11 | 336 | 3.01e-96 | 288 |
| Msa0258040 | MtrunA17_Chr2g0292111 | 47.231 | 307 | 154 | 2 | 20 | 318 | 24 | 330 | 4.10e-95 | 285 |
| Msa0258040 | MtrunA17_Chr2g0291751 | 47.799 | 318 | 155 | 4 | 9 | 318 | 16 | 330 | 1.07e-94 | 285 |
| Msa0258040 | MtrunA17_Chr2g0292251 | 46.580 | 307 | 156 | 2 | 20 | 318 | 23 | 329 | 2.38e-94 | 283 |
| Msa0258040 | MtrunA17_Chr2g0292291 | 45.846 | 325 | 167 | 3 | 3 | 318 | 8 | 332 | 5.82e-94 | 283 |
| Msa0258040 | MtrunA17_Chr2g0292181 | 45.370 | 324 | 169 | 2 | 3 | 318 | 16 | 339 | 6.92e-94 | 283 |
| Msa0258040 | MtrunA17_Chr2g0292261 | 45.679 | 324 | 168 | 2 | 3 | 318 | 7 | 330 | 7.73e-94 | 282 |
| Msa0258040 | MtrunA17_Chr2g0292241 | 45.312 | 320 | 167 | 2 | 7 | 318 | 11 | 330 | 1.09e-93 | 282 |
| Msa0258040 | MtrunA17_Chr2g0292091 | 44.785 | 326 | 171 | 3 | 1 | 318 | 1 | 325 | 7.16e-93 | 280 |
| Msa0258040 | MtrunA17_Chr5g0400331 | 47.697 | 304 | 145 | 3 | 28 | 318 | 29 | 331 | 1.25e-91 | 276 |
| Msa0258040 | MtrunA17_Chr5g0432401 | 46.541 | 318 | 124 | 7 | 6 | 317 | 8 | 285 | 1.41e-90 | 271 |
| Msa0258040 | MtrunA17_Chr4g0013721 | 46.405 | 306 | 153 | 4 | 20 | 318 | 95 | 396 | 1.04e-89 | 274 |
| Msa0258040 | MtrunA17_Chr2g0292101 | 45.724 | 304 | 157 | 2 | 23 | 318 | 23 | 326 | 5.61e-88 | 267 |
| Msa0258040 | MtrunA17_Chr3g0128061 | 42.138 | 318 | 175 | 3 | 9 | 318 | 10 | 326 | 1.74e-86 | 263 |
| Msa0258040 | MtrunA17_Chr5g0421411 | 45.965 | 285 | 143 | 5 | 45 | 318 | 1 | 285 | 5.29e-85 | 257 |
| Msa0258040 | MtrunA17_Chr4g0013821 | 42.951 | 305 | 163 | 4 | 21 | 318 | 24 | 324 | 1.51e-83 | 256 |
| Msa0258040 | MtrunA17_Chr6g0477071 | 40.446 | 314 | 179 | 7 | 7 | 318 | 35 | 342 | 3.42e-82 | 252 |
| Msa0258040 | MtrunA17_Chr4g0024121 | 41.159 | 328 | 181 | 5 | 1 | 318 | 1 | 326 | 3.17e-80 | 246 |
| Msa0258040 | MtrunA17_Chr2g0322861 | 43.175 | 315 | 167 | 6 | 13 | 318 | 75 | 386 | 1.36e-79 | 247 |
| Msa0258040 | MtrunA17_Chr1g0204011 | 39.198 | 324 | 179 | 8 | 3 | 318 | 9 | 322 | 4.26e-76 | 236 |
| Msa0258040 | MtrunA17_Chr4g0063671 | 41.801 | 311 | 163 | 6 | 20 | 318 | 16 | 320 | 1.20e-74 | 232 |
| Msa0258040 | MtrunA17_Chr6g0460711 | 41.195 | 318 | 177 | 6 | 6 | 318 | 2 | 314 | 3.22e-74 | 231 |
| Msa0258040 | MtrunA17_Chr5g0401431 | 40.122 | 329 | 184 | 5 | 1 | 317 | 1 | 328 | 3.62e-74 | 231 |
| Msa0258040 | MtrunA17_Chr5g0405991 | 39.450 | 327 | 175 | 7 | 1 | 318 | 4 | 316 | 9.57e-74 | 229 |
| Msa0258040 | MtrunA17_Chr7g0268501 | 40.373 | 322 | 178 | 5 | 6 | 318 | 4 | 320 | 1.07e-73 | 229 |
| Msa0258040 | MtrunA17_Chr7g0268521 | 40.373 | 322 | 178 | 5 | 6 | 318 | 4 | 320 | 1.07e-73 | 229 |
| Msa0258040 | MtrunA17_Chr1g0148021 | 40.062 | 322 | 181 | 5 | 7 | 318 | 9 | 328 | 1.13e-73 | 230 |
| Msa0258040 | MtrunA17_Chr1g0194151 | 40.909 | 330 | 177 | 7 | 1 | 318 | 10 | 333 | 1.38e-73 | 230 |
| Msa0258040 | MtrunA17_Chr8g0371381 | 39.610 | 308 | 168 | 6 | 20 | 318 | 21 | 319 | 4.61e-73 | 228 |
| Msa0258040 | MtrunA17_Chr1g0157051 | 40.000 | 320 | 173 | 8 | 8 | 317 | 7 | 317 | 1.24e-72 | 227 |
| Msa0258040 | MtrunA17_Chr2g0279041 | 39.628 | 323 | 176 | 7 | 7 | 318 | 11 | 325 | 1.38e-72 | 227 |
| Msa0258040 | MtrunA17_Chr7g0254201 | 39.016 | 305 | 167 | 5 | 23 | 318 | 18 | 312 | 3.48e-72 | 226 |
| Msa0258040 | MtrunA17_Chr1g0188431 | 38.365 | 318 | 185 | 7 | 6 | 318 | 16 | 327 | 7.33e-72 | 225 |
| Msa0258040 | MtrunA17_Chr7g0225221 | 37.888 | 322 | 194 | 4 | 1 | 318 | 1 | 320 | 9.46e-70 | 219 |
| Msa0258040 | MtrunA17_Chr7g0254231 | 39.262 | 298 | 173 | 6 | 23 | 318 | 20 | 311 | 1.20e-69 | 219 |
| Msa0258040 | MtrunA17_Chr1g0194271 | 39.763 | 337 | 178 | 7 | 1 | 318 | 10 | 340 | 2.25e-69 | 219 |
| Msa0258040 | MtrunA17_Chr4g0053871 | 39.806 | 309 | 180 | 4 | 14 | 317 | 16 | 323 | 2.63e-68 | 216 |
| Msa0258040 | MtrunA17_Chr6g0467161 | 39.692 | 325 | 177 | 9 | 7 | 318 | 18 | 336 | 3.73e-68 | 216 |
| Msa0258040 | MtrunA17_Chr1g0164891 | 40.924 | 303 | 163 | 6 | 29 | 318 | 93 | 392 | 4.58e-68 | 217 |
| Msa0258040 | MtrunA17_Chr4g0046131 | 38.462 | 325 | 187 | 7 | 4 | 316 | 21 | 344 | 8.86e-67 | 213 |
| Msa0258040 | MtrunA17_Chr2g0296621 | 38.158 | 304 | 166 | 7 | 25 | 318 | 50 | 341 | 1.07e-65 | 210 |
| Msa0258040 | MtrunA17_Chr4g0076211 | 38.047 | 297 | 167 | 6 | 30 | 318 | 46 | 333 | 4.62e-64 | 205 |
| Msa0258040 | MtrunA17_Chr1g0197411 | 36.335 | 322 | 192 | 6 | 7 | 318 | 12 | 330 | 8.29e-64 | 204 |
| Msa0258040 | MtrunA17_Chr4g0072091 | 39.203 | 301 | 169 | 5 | 24 | 314 | 23 | 319 | 2.60e-63 | 203 |
| Msa0258040 | MtrunA17_Chr3g0114461 | 54.891 | 184 | 83 | 0 | 135 | 318 | 9 | 192 | 5.74e-63 | 197 |
| Msa0258040 | MtrunA17_Chr4g0075241 | 34.385 | 317 | 198 | 5 | 9 | 318 | 14 | 327 | 9.50e-63 | 202 |
| Msa0258040 | MtrunA17_Chr1g0181511 | 34.551 | 301 | 190 | 4 | 23 | 318 | 25 | 323 | 9.37e-62 | 199 |
| Msa0258040 | MtrunA17_Chr2g0278671 | 39.228 | 311 | 169 | 9 | 21 | 318 | 20 | 323 | 1.39e-61 | 199 |
| Msa0258040 | MtrunA17_Chr6g0467121 | 38.851 | 296 | 173 | 6 | 25 | 318 | 74 | 363 | 1.02e-60 | 198 |
| Msa0258040 | MtrunA17_Chr3g0136751 | 35.780 | 327 | 196 | 3 | 1 | 318 | 1 | 322 | 5.47e-60 | 194 |
| Msa0258040 | MtrunA17_Chr2g0316481 | 36.228 | 334 | 171 | 9 | 25 | 318 | 76 | 407 | 9.57e-60 | 196 |
| Msa0258040 | MtrunA17_Chr1g0181481 | 34.884 | 301 | 189 | 4 | 23 | 318 | 25 | 323 | 1.54e-59 | 193 |
| Msa0258040 | MtrunA17_Chr2g0316791 | 36.228 | 334 | 171 | 9 | 25 | 318 | 76 | 407 | 1.89e-59 | 196 |
| Msa0258040 | MtrunA17_Chr2g0316831 | 36.036 | 333 | 171 | 9 | 25 | 317 | 112 | 442 | 1.29e-58 | 194 |
| Msa0258040 | MtrunA17_Chr6g0451571 | 35.161 | 310 | 184 | 6 | 21 | 318 | 30 | 334 | 2.05e-58 | 191 |
| Msa0258040 | MtrunA17_Chr1g0181431 | 33.555 | 301 | 193 | 4 | 23 | 318 | 25 | 323 | 2.63e-58 | 190 |
| Msa0258040 | MtrunA17_Chr6g0467251 | 37.329 | 292 | 178 | 5 | 25 | 314 | 36 | 324 | 7.48e-58 | 190 |
| Msa0258040 | MtrunA17_Chr2g0329641 | 33.837 | 331 | 194 | 6 | 7 | 318 | 11 | 335 | 1.92e-57 | 188 |
| Msa0258040 | MtrunA17_Chr2g0279061 | 42.529 | 261 | 133 | 6 | 69 | 318 | 12 | 266 | 4.28e-57 | 185 |
| Msa0258040 | MtrunA17_Chr2g0316191 | 34.328 | 335 | 177 | 8 | 25 | 318 | 76 | 408 | 4.78e-57 | 189 |
| Msa0258040 | MtrunA17_Chr8g0364291 | 35.016 | 317 | 195 | 6 | 11 | 318 | 10 | 324 | 6.22e-57 | 187 |
| Msa0258040 | MtrunA17_Chr4g0074851 | 33.028 | 327 | 204 | 6 | 5 | 318 | 4 | 328 | 1.28e-52 | 176 |
| Msa0258040 | MtrunA17_Chr2g0311251 | 33.735 | 332 | 178 | 8 | 25 | 317 | 11 | 339 | 6.68e-52 | 174 |
| Msa0258040 | MtrunA17_Chr2g0311241 | 31.200 | 375 | 175 | 8 | 23 | 317 | 58 | 429 | 1.04e-51 | 176 |
| Msa0258040 | MtrunA17_Chr5g0413051 | 33.968 | 315 | 181 | 7 | 23 | 318 | 71 | 377 | 3.14e-51 | 173 |
| Msa0258040 | MtrunA17_Chr2g0292281 | 40.191 | 209 | 107 | 4 | 118 | 318 | 18 | 216 | 5.37e-44 | 150 |
| Msa0258040 | MtrunA17_Chr3g0114491 | 63.303 | 109 | 40 | 0 | 24 | 132 | 17 | 125 | 8.95e-44 | 146 |
| Msa0258040 | MtrunA17_Chr2g0316141 | 35.424 | 271 | 150 | 10 | 71 | 318 | 11 | 279 | 2.69e-40 | 142 |
| Msa0258040 | MtrunA17_Chr2g0316181 | 35.424 | 271 | 150 | 10 | 71 | 318 | 11 | 279 | 2.69e-40 | 142 |
| Msa0258040 | MtrunA17_Chr2g0316811 | 34.568 | 243 | 133 | 5 | 25 | 243 | 50 | 290 | 8.87e-40 | 142 |
| Msa0258040 | MtrunA17_Chr4g0004591 | 28.000 | 325 | 162 | 5 | 22 | 317 | 74 | 355 | 5.36e-38 | 138 |
| Msa0258040 | MtrunA17_Chr5g0432321 | 52.137 | 117 | 55 | 1 | 146 | 262 | 17 | 132 | 1.53e-33 | 120 |
| Msa0258040 | MtrunA17_Chr3g0104101 | 41.096 | 146 | 73 | 7 | 185 | 318 | 5 | 149 | 2.26e-24 | 96.7 |
| Msa0258040 | MtrunA17_Chr1g0181491 | 42.241 | 116 | 61 | 3 | 22 | 135 | 9 | 120 | 3.47e-24 | 96.3 |
| Msa0258040 | MtrunA17_Chr5g0432361 | 50.000 | 90 | 43 | 2 | 229 | 317 | 20 | 108 | 2.30e-22 | 90.1 |
| Msa0258040 | MtrunA17_Chr1g0181501 | 29.630 | 189 | 126 | 4 | 135 | 318 | 3 | 189 | 5.12e-21 | 89.0 |
| Msa0258040 | MtrunA17_Chr7g0254181 | 40.952 | 105 | 58 | 2 | 87 | 191 | 22 | 122 | 1.92e-19 | 83.6 |
| Msa0258040 | MtrunA17_Chr4g0013811 | 47.297 | 74 | 39 | 0 | 136 | 209 | 6 | 79 | 8.13e-18 | 77.0 |
| Msa0258040 | MtrunA17_Chr6g0468731 | 51.389 | 72 | 31 | 2 | 64 | 135 | 22 | 89 | 9.34e-17 | 74.3 |
| Msa0258040 | MtrunA17_Chr1g0196191 | 55.224 | 67 | 29 | 1 | 67 | 133 | 27 | 92 | 1.63e-15 | 72.8 |
| Msa0258040 | MtrunA17_Chr3g0137751 | 25.735 | 272 | 136 | 9 | 40 | 297 | 91 | 310 | 1.69e-15 | 75.9 |
| Msa0258040 | MtrunA17_Chr7g0268491 | 43.529 | 85 | 46 | 1 | 234 | 318 | 15 | 97 | 4.14e-13 | 64.3 |
| Msa0258040 | MtrunA17_Chr7g0254171 | 29.545 | 132 | 92 | 1 | 71 | 202 | 4 | 134 | 2.83e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258040 | AT5G05340.1 | 62.752 | 298 | 108 | 2 | 23 | 318 | 28 | 324 | 1.39e-134 | 385 |
| Msa0258040 | AT5G58400.1 | 56.051 | 314 | 134 | 3 | 8 | 318 | 13 | 325 | 1.32e-118 | 345 |
| Msa0258040 | AT5G58390.1 | 57.188 | 313 | 130 | 4 | 9 | 318 | 5 | 316 | 1.24e-114 | 334 |
| Msa0258040 | AT1G14550.1 | 50.633 | 316 | 152 | 3 | 7 | 318 | 6 | 321 | 3.80e-109 | 320 |
| Msa0258040 | AT4G36430.1 | 49.020 | 306 | 149 | 1 | 20 | 318 | 25 | 330 | 1.72e-108 | 319 |
| Msa0258040 | AT5G66390.1 | 48.485 | 330 | 156 | 2 | 3 | 318 | 4 | 333 | 5.76e-108 | 318 |
| Msa0258040 | AT3G50990.1 | 51.307 | 306 | 142 | 1 | 20 | 318 | 36 | 341 | 2.77e-107 | 317 |
| Msa0258040 | AT1G14540.1 | 48.882 | 313 | 159 | 1 | 7 | 318 | 3 | 315 | 4.10e-106 | 312 |
| Msa0258040 | AT2G18140.1 | 46.269 | 335 | 163 | 3 | 1 | 318 | 1 | 335 | 1.12e-105 | 312 |
| Msa0258040 | AT2G18150.1 | 46.131 | 336 | 163 | 3 | 1 | 318 | 1 | 336 | 2.33e-105 | 311 |
| Msa0258040 | AT5G06720.1 | 47.256 | 328 | 163 | 3 | 1 | 318 | 6 | 333 | 7.69e-104 | 307 |
| Msa0258040 | AT1G44970.1 | 52.980 | 302 | 134 | 2 | 25 | 318 | 45 | 346 | 1.11e-103 | 307 |
| Msa0258040 | AT1G49570.1 | 51.656 | 302 | 135 | 4 | 23 | 314 | 46 | 346 | 1.28e-101 | 302 |
| Msa0258040 | AT5G06730.1 | 47.352 | 321 | 158 | 4 | 6 | 318 | 17 | 334 | 2.78e-101 | 301 |
| Msa0258040 | AT2G38390.1 | 47.022 | 319 | 160 | 3 | 9 | 318 | 15 | 333 | 8.27e-99 | 295 |
| Msa0258040 | AT4G08780.1 | 48.867 | 309 | 146 | 5 | 21 | 318 | 20 | 327 | 1.44e-98 | 294 |
| Msa0258040 | AT3G32980.1 | 46.729 | 321 | 161 | 3 | 8 | 318 | 14 | 334 | 1.79e-96 | 289 |
| Msa0258040 | AT4G08770.1 | 47.078 | 308 | 153 | 3 | 21 | 318 | 20 | 327 | 1.93e-95 | 286 |
| Msa0258040 | AT3G49120.1 | 46.273 | 322 | 163 | 3 | 7 | 318 | 14 | 335 | 3.30e-94 | 283 |
| Msa0258040 | AT5G19890.1 | 47.826 | 322 | 150 | 7 | 9 | 318 | 12 | 327 | 6.84e-94 | 282 |
| Msa0258040 | AT2G38380.1 | 46.082 | 319 | 163 | 3 | 9 | 318 | 15 | 333 | 2.85e-93 | 281 |
| Msa0258040 | AT3G49110.1 | 44.720 | 322 | 168 | 3 | 7 | 318 | 15 | 336 | 1.89e-91 | 276 |
| Msa0258040 | AT4G16270.1 | 45.981 | 311 | 159 | 3 | 15 | 318 | 40 | 348 | 3.32e-91 | 276 |
| Msa0258040 | AT2G22420.1 | 42.769 | 325 | 173 | 5 | 1 | 318 | 1 | 319 | 2.70e-89 | 270 |
| Msa0258040 | AT2G35380.1 | 45.289 | 329 | 160 | 5 | 9 | 318 | 8 | 335 | 3.12e-89 | 270 |
| Msa0258040 | AT1G68850.1 | 40.361 | 332 | 177 | 8 | 7 | 318 | 5 | 335 | 8.65e-88 | 266 |
| Msa0258040 | AT5G19880.1 | 44.892 | 323 | 164 | 6 | 8 | 318 | 9 | 329 | 5.33e-85 | 259 |
| Msa0258040 | AT3G03670.1 | 42.271 | 317 | 173 | 4 | 9 | 318 | 8 | 321 | 1.57e-79 | 245 |
| Msa0258040 | AT5G15180.1 | 40.125 | 319 | 181 | 4 | 7 | 318 | 14 | 329 | 5.49e-79 | 244 |
| Msa0258040 | AT1G05260.1 | 40.789 | 304 | 170 | 4 | 23 | 318 | 24 | 325 | 4.61e-78 | 241 |
| Msa0258040 | AT4G11290.1 | 40.312 | 320 | 182 | 3 | 7 | 318 | 8 | 326 | 3.85e-77 | 239 |
| Msa0258040 | AT5G17820.1 | 40.432 | 324 | 171 | 7 | 2 | 318 | 5 | 313 | 5.93e-76 | 235 |
| Msa0258040 | AT5G42180.1 | 39.752 | 322 | 180 | 6 | 4 | 317 | 1 | 316 | 7.80e-76 | 235 |
| Msa0258040 | AT3G01190.1 | 41.463 | 328 | 175 | 8 | 1 | 318 | 1 | 321 | 8.25e-76 | 235 |
| Msa0258040 | AT5G64120.1 | 44.257 | 296 | 153 | 5 | 29 | 318 | 39 | 328 | 4.48e-75 | 234 |
| Msa0258040 | AT5G17820.2 | 40.432 | 324 | 171 | 7 | 2 | 318 | 58 | 366 | 6.29e-75 | 234 |
| Msa0258040 | AT5G14130.1 | 39.938 | 323 | 174 | 7 | 8 | 318 | 16 | 330 | 2.46e-74 | 232 |
| Msa0258040 | AT5G14130.2 | 39.938 | 323 | 174 | 7 | 8 | 318 | 57 | 371 | 7.47e-74 | 232 |
| Msa0258040 | AT3G21770.1 | 38.614 | 303 | 176 | 4 | 20 | 314 | 24 | 324 | 3.42e-73 | 229 |
| Msa0258040 | AT1G05240.1 | 39.739 | 307 | 165 | 6 | 25 | 318 | 26 | 325 | 4.73e-72 | 226 |
| Msa0258040 | AT1G05250.1 | 39.739 | 307 | 165 | 6 | 25 | 318 | 26 | 325 | 4.73e-72 | 226 |
| Msa0258040 | AT1G71695.1 | 41.837 | 294 | 165 | 5 | 25 | 314 | 44 | 335 | 5.21e-72 | 227 |
| Msa0258040 | AT2G18980.1 | 39.514 | 329 | 182 | 7 | 1 | 318 | 1 | 323 | 6.79e-72 | 225 |
| Msa0258040 | AT2G41480.1 | 39.198 | 324 | 179 | 7 | 7 | 318 | 11 | 328 | 1.11e-70 | 223 |
| Msa0258040 | AT4G30170.1 | 40.584 | 308 | 166 | 7 | 22 | 318 | 24 | 325 | 2.60e-70 | 221 |
| Msa0258040 | AT4G37530.1 | 39.617 | 313 | 168 | 6 | 21 | 318 | 23 | 329 | 4.86e-70 | 221 |
| Msa0258040 | AT5G67400.1 | 38.390 | 323 | 187 | 5 | 7 | 318 | 8 | 329 | 9.59e-70 | 220 |
| Msa0258040 | AT3G49960.1 | 39.241 | 316 | 181 | 4 | 13 | 318 | 15 | 329 | 8.96e-69 | 218 |
| Msa0258040 | AT3G28200.1 | 39.073 | 302 | 180 | 4 | 20 | 318 | 16 | 316 | 9.95e-69 | 217 |
| Msa0258040 | AT4G26010.1 | 38.750 | 320 | 183 | 8 | 1 | 318 | 1 | 309 | 1.08e-68 | 217 |
| Msa0258040 | AT4G26010.2 | 38.750 | 320 | 183 | 8 | 1 | 318 | 29 | 337 | 1.54e-68 | 217 |
| Msa0258040 | AT5G40150.1 | 38.284 | 303 | 182 | 4 | 20 | 318 | 27 | 328 | 3.65e-68 | 216 |
| Msa0258040 | AT5G51890.1 | 37.695 | 321 | 181 | 8 | 7 | 318 | 12 | 322 | 3.12e-67 | 213 |
| Msa0258040 | AT4G37520.1 | 37.942 | 311 | 172 | 6 | 23 | 318 | 25 | 329 | 5.06e-67 | 213 |
| Msa0258040 | AT2G35380.2 | 47.347 | 245 | 115 | 4 | 87 | 318 | 4 | 247 | 7.72e-67 | 210 |
| Msa0258040 | AT5G39580.1 | 38.769 | 325 | 186 | 6 | 1 | 318 | 1 | 319 | 2.88e-66 | 211 |
| Msa0258040 | AT4G33420.1 | 39.322 | 295 | 172 | 6 | 25 | 318 | 37 | 325 | 3.85e-66 | 211 |
| Msa0258040 | AT5G64110.1 | 40.361 | 332 | 173 | 7 | 4 | 318 | 7 | 330 | 3.91e-66 | 211 |
| Msa0258040 | AT4G33420.2 | 39.322 | 295 | 172 | 6 | 25 | 318 | 84 | 372 | 1.26e-65 | 211 |
| Msa0258040 | AT1G30870.1 | 38.000 | 300 | 167 | 7 | 25 | 314 | 51 | 341 | 2.14e-65 | 209 |
| Msa0258040 | AT4G25980.1 | 37.730 | 326 | 184 | 8 | 6 | 318 | 7 | 326 | 2.94e-65 | 208 |
| Msa0258040 | AT4G37520.2 | 37.621 | 311 | 170 | 7 | 23 | 318 | 25 | 326 | 8.64e-65 | 207 |
| Msa0258040 | AT5G64100.1 | 38.323 | 334 | 178 | 7 | 5 | 318 | 6 | 331 | 1.22e-64 | 207 |
| Msa0258040 | AT1G77100.1 | 39.812 | 319 | 180 | 9 | 7 | 318 | 6 | 319 | 2.63e-64 | 206 |
| Msa0258040 | AT2G39040.1 | 39.228 | 311 | 172 | 7 | 22 | 318 | 43 | 350 | 2.46e-63 | 204 |
| Msa0258040 | AT4G17690.1 | 36.577 | 298 | 184 | 4 | 25 | 318 | 26 | 322 | 8.03e-63 | 202 |
| Msa0258040 | AT2G34060.1 | 37.621 | 311 | 181 | 6 | 18 | 316 | 35 | 344 | 1.33e-62 | 202 |
| Msa0258040 | AT4G33870.1 | 33.036 | 336 | 177 | 7 | 23 | 314 | 66 | 397 | 4.44e-62 | 202 |
| Msa0258040 | AT4G37530.2 | 41.379 | 261 | 133 | 5 | 21 | 266 | 23 | 278 | 1.02e-60 | 195 |
| Msa0258040 | AT1G34510.1 | 37.785 | 307 | 183 | 6 | 13 | 318 | 10 | 309 | 1.06e-60 | 196 |
| Msa0258040 | AT5G47000.1 | 35.423 | 319 | 197 | 5 | 8 | 318 | 13 | 330 | 6.41e-60 | 195 |
| Msa0258040 | AT2G24800.1 | 36.013 | 311 | 174 | 5 | 23 | 318 | 29 | 329 | 1.04e-59 | 194 |
| Msa0258040 | AT4G31760.1 | 34.969 | 326 | 194 | 4 | 2 | 318 | 10 | 326 | 1.06e-59 | 194 |
| Msa0258040 | AT5G22410.1 | 36.391 | 327 | 187 | 10 | 1 | 315 | 5 | 322 | 5.50e-59 | 192 |
| Msa0258040 | AT5G24070.1 | 34.139 | 331 | 191 | 7 | 8 | 318 | 12 | 335 | 6.96e-57 | 187 |
| Msa0258040 | AT1G24110.1 | 35.016 | 317 | 195 | 5 | 11 | 318 | 8 | 322 | 1.05e-56 | 186 |
| Msa0258040 | AT3G17070.1 | 34.718 | 337 | 193 | 11 | 2 | 318 | 10 | 339 | 1.12e-55 | 184 |
| Msa0258040 | AT2G37130.1 | 33.663 | 303 | 193 | 5 | 22 | 318 | 27 | 327 | 3.72e-55 | 182 |
| Msa0258040 | AT2G43480.1 | 35.117 | 299 | 173 | 6 | 33 | 318 | 45 | 335 | 6.28e-55 | 182 |
| Msa0258040 | AT4G21960.1 | 32.822 | 326 | 204 | 5 | 6 | 318 | 4 | 327 | 1.50e-54 | 181 |
| Msa0258040 | AT2G37130.2 | 33.670 | 297 | 189 | 5 | 28 | 318 | 2 | 296 | 3.09e-54 | 179 |
| Msa0258040 | AT4G25980.2 | 42.781 | 187 | 103 | 3 | 6 | 192 | 52 | 234 | 1.07e-44 | 154 |
| Msa0258040 | AT3G17070.2 | 36.226 | 265 | 150 | 10 | 67 | 318 | 18 | 276 | 8.94e-42 | 146 |
| Msa0258040 | AT5G39580.2 | 36.889 | 225 | 133 | 4 | 1 | 225 | 1 | 216 | 4.39e-41 | 143 |
| Msa0258040 | AT2G24800.2 | 39.785 | 186 | 106 | 2 | 23 | 206 | 29 | 210 | 2.62e-40 | 141 |
| Msa0258040 | AT3G42570.1 | 37.634 | 93 | 57 | 1 | 101 | 192 | 57 | 149 | 8.08e-15 | 71.2 |
| Msa0258040 | AT4G35970.1 | 26.087 | 253 | 131 | 9 | 59 | 300 | 33 | 240 | 4.80e-13 | 68.6 |
| Msa0258040 | AT4G35970.2 | 27.273 | 220 | 105 | 8 | 59 | 267 | 33 | 208 | 5.27e-11 | 62.0 |
Find 77 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAGACAAATTTGAAAATT+TGG | 0.061297 | 2_2:-54027717 | Msa0258040:five_prime_UTR |
| TATAACAAATAATTTGTTTA+AGG | 0.133122 | 2_2:+54027475 | None:intergenic |
| AATGACCTTACTGTCCTTTC+TGG | 0.161088 | 2_2:-54025679 | Msa0258040:CDS |
| TTCTGGTGGTGACATAAATT+TGG | 0.222257 | 2_2:-54025548 | Msa0258040:CDS |
| GATGACACTGCCACCTTTAC+CGG | 0.260417 | 2_2:-54027151 | Msa0258040:CDS |
| CAACTTAATCCTAACTTCTA+TGG | 0.286741 | 2_2:-54027413 | Msa0258040:CDS |
| TGTTGGTTCTCAAGTTTCTT+TGG | 0.288110 | 2_2:-54025422 | Msa0258040:CDS |
| GCAGACAAATTTGAAAATTT+GGG | 0.300898 | 2_2:-54027716 | Msa0258040:five_prime_UTR |
| CAAGTTCTTCCATAGAAGTT+AGG | 0.307110 | 2_2:+54027404 | None:intergenic |
| CAGAAGATGGTCCAGGGATT+TGG | 0.307170 | 2_2:+54025749 | None:intergenic |
| AGTCCTCTAACTGGGACTAA+TGG | 0.328102 | 2_2:-54025325 | Msa0258040:CDS |
| AATGACCTTGTTGCTAATAA+AGG | 0.329690 | 2_2:-54025478 | Msa0258040:CDS |
| AAATCAAATTGTCCTACTTC+TGG | 0.333770 | 2_2:-54025565 | Msa0258040:CDS |
| CGCACTATGGTTTGAAGGTT+AGG | 0.349073 | 2_2:+54027380 | None:intergenic |
| TACATGCACCGTCACAATAA+TGG | 0.349177 | 2_2:-54027630 | Msa0258040:five_prime_UTR |
| GGTCATTTCCCTTCGCACTA+TGG | 0.351240 | 2_2:+54027367 | None:intergenic |
| GTCCTCTAACTGGGACTAAT+GGG | 0.358033 | 2_2:-54025324 | Msa0258040:CDS |
| AGTAGAATTAGTCCTCTAAC+TGG | 0.369986 | 2_2:-54025334 | Msa0258040:CDS |
| GTTCTCAAGTTTCTTTGGTT+AGG | 0.371031 | 2_2:-54025417 | Msa0258040:CDS |
| TCCCCATTAGTCCCAGTTAG+AGG | 0.372964 | 2_2:+54025322 | None:intergenic |
| AGCTTCATTATTGATAGCTT+TGG | 0.373071 | 2_2:+54027346 | None:intergenic |
| CCCTTCGCACTATGGTTTGA+AGG | 0.388067 | 2_2:+54027375 | None:intergenic |
| GCTATCAATGAGAGAAGTTA+TGG | 0.392446 | 2_2:+54027536 | None:intergenic |
| AATCTCTATAAAATCTTGAA+TGG | 0.404314 | 2_2:+54025252 | None:intergenic |
| AAGTATGAAGTAGTCGTTGC+TGG | 0.406989 | 2_2:+54027923 | None:intergenic |
| TAATTGTTGTCAAAAGTAAC+TGG | 0.409448 | 2_2:+54025505 | None:intergenic |
| TTAGAGAATCAAAGTCATAA+AGG | 0.409731 | 2_2:-54025223 | Msa0258040:three_prime_UTR |
| CATAAAGGTTGACTAGATCT+TGG | 0.416665 | 2_2:-54025208 | Msa0258040:three_prime_UTR |
| TGTAGCTTGGAGGACCAACC+TGG | 0.432023 | 2_2:-54025828 | Msa0258040:intron |
| TATCGGGTAAGTCAAGTAAT+GGG | 0.436429 | 2_2:-54027833 | Msa0258040:five_prime_UTR |
| GGGAGATTAGAAAGAATTGC+AGG | 0.441402 | 2_2:-54025303 | Msa0258040:CDS |
| TTACATTTACAAAGCAATCA+TGG | 0.465031 | 2_2:+54027291 | None:intergenic |
| AAGAGACTTTGCAGCTGCTA+TGG | 0.475794 | 2_2:-54025365 | Msa0258040:CDS |
| GTTAGGATTAAGTTGTGCAT+TGG | 0.486318 | 2_2:+54027421 | None:intergenic |
| ATAGAGAGAGGAATTTGTAT+AGG | 0.490585 | 2_2:+54027607 | None:intergenic |
| GATAGGTCAGAAGATGGTCC+AGG | 0.491263 | 2_2:+54025742 | None:intergenic |
| TTGACATTCTGCTTGACCTA+TGG | 0.493071 | 2_2:+54025648 | None:intergenic |
| ATCAATAATGAAGCTCGGAT+TGG | 0.502783 | 2_2:-54027338 | Msa0258040:CDS |
| TTATCGGGTAAGTCAAGTAA+TGG | 0.514390 | 2_2:-54027834 | Msa0258040:five_prime_UTR |
| CTAGCACTTGCAACTAGAGA+TGG | 0.521717 | 2_2:-54027016 | Msa0258040:CDS |
| GCAGCAAACAGCCAAATCCC+TGG | 0.526990 | 2_2:-54025760 | Msa0258040:CDS |
| AGATAGTGTAGTAACAAAAG+AGG | 0.527831 | 2_2:+54027890 | None:intergenic |
| TTTGCAAGAAGCTTCAACAC+TGG | 0.540754 | 2_2:+54027063 | None:intergenic |
| GTGTTGCTTAAATCAATGAA+TGG | 0.552619 | 2_2:-54025101 | Msa0258040:three_prime_UTR |
| CTTGCATCTCTTCTTCCAAG+TGG | 0.553652 | 2_2:+54025799 | None:intergenic |
| TGCAAAGTTTGTGTCAATGT+TGG | 0.554512 | 2_2:+54025597 | None:intergenic |
| TGTATAGGCCATTATTGTGA+CGG | 0.555137 | 2_2:+54027622 | None:intergenic |
| CTTTCTGGTGCACACACCAT+AGG | 0.556404 | 2_2:-54025664 | Msa0258040:CDS |
| AGTATGAAGTAGTCGTTGCT+GGG | 0.565315 | 2_2:+54027924 | None:intergenic |
| TCAAATTGTCCTACTTCTGG+TGG | 0.566583 | 2_2:-54025562 | Msa0258040:CDS |
| AGTCGTTGCTGGGTTGAAAG+TGG | 0.567202 | 2_2:+54027934 | None:intergenic |
| CCAACCTGGGTAGTACCACT+TGG | 0.571318 | 2_2:-54025814 | Msa0258040:CDS |
| ACCTTCAAACCATAGTGCGA+AGG | 0.576325 | 2_2:-54027376 | Msa0258040:CDS |
| CCAAGTGGTACTACCCAGGT+TGG | 0.578738 | 2_2:+54025814 | None:intergenic |
| TAGACCTTTGTTTCTAAACA+TGG | 0.579085 | 2_2:+54025708 | None:intergenic |
| TTTATGTCACCACCAGAAGT+AGG | 0.583827 | 2_2:+54025553 | None:intergenic |
| AAGCTATCAATAATGAAGCT+CGG | 0.585896 | 2_2:-54027343 | Msa0258040:CDS |
| ACATGGTAGTGAGTGTGGAT+AGG | 0.587508 | 2_2:+54025725 | None:intergenic |
| CCTTCAAACCATAGTGCGAA+GGG | 0.588983 | 2_2:-54027375 | Msa0258040:CDS |
| TCTTCCAAGTGGTACTACCC+AGG | 0.591436 | 2_2:+54025810 | None:intergenic |
| ACTAAGCAATATATAGAGAG+AGG | 0.594060 | 2_2:+54027595 | None:intergenic |
| ACTACCATGTTTAGAAACAA+AGG | 0.599660 | 2_2:-54025712 | Msa0258040:CDS |
| TGACTAGATCTTGGACACAT+TGG | 0.605648 | 2_2:-54025199 | Msa0258040:three_prime_UTR |
| GTGCACCAGAAAGGACAGTA+AGG | 0.606249 | 2_2:+54025674 | None:intergenic |
| AGTGTGGATAGGTCAGAAGA+TGG | 0.621043 | 2_2:+54025736 | None:intergenic |
| TCTAAACATGGTAGTGAGTG+TGG | 0.630401 | 2_2:+54025720 | None:intergenic |
| GTAGAATTAGTCCTCTAACT+GGG | 0.630567 | 2_2:-54025333 | Msa0258040:CDS |
| AGAGAAGTTATGGAAATGTG+AGG | 0.643958 | 2_2:+54027546 | None:intergenic |
| TACCCGATAAAATAAAACAA+AGG | 0.645935 | 2_2:+54027847 | None:intergenic |
| GAAGTCCTTTATTAGCAACA+AGG | 0.654884 | 2_2:+54025473 | None:intergenic |
| TCCTCTAACTGGGACTAATG+GGG | 0.661630 | 2_2:-54025323 | Msa0258040:CDS |
| AATATCAGCACAAGAGACAG+TGG | 0.665482 | 2_2:+54027039 | None:intergenic |
| CTATGGTGTGTGCACCAGAA+AGG | 0.672627 | 2_2:+54025665 | None:intergenic |
| GTAGCTTGGAGGACCAACCT+GGG | 0.676980 | 2_2:-54025827 | Msa0258040:intron |
| ATAGGTCAGAAGATGGTCCA+GGG | 0.677432 | 2_2:+54025743 | None:intergenic |
| ACTGGAGAGACAGAATCAAG+AGG | 0.693800 | 2_2:+54025523 | None:intergenic |
| GTGAGATAAAGAGAATACAA+TGG | 0.694755 | 2_2:+54027807 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTGTTTACTTTTT+GGG | + | chr2_2:54025230-54025249 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGTTTACTTTT+TGG | + | chr2_2:54025231-54025250 | None:intergenic | 10.0% |
| !!! | AGATATTTTTATATTGAATA+TGG | - | chr2_2:54025489-54025508 | Msa0258040:CDS | 10.0% |
| !!! | TATAACAAATAATTTGTTTA+AGG | + | chr2_2:54025518-54025537 | None:intergenic | 10.0% |
| !! | CATAATATATAATATATGTA+AGG | + | chr2_2:54026259-54026278 | None:intergenic | 10.0% |
| !! | TAAATAAAATAAGAAAAGAT+CGG | + | chr2_2:54026690-54026709 | None:intergenic | 10.0% |
| !!! | TTTCTTATTTTATTTAATCA+AGG | - | chr2_2:54026694-54026713 | Msa0258040:intron | 10.0% |
| !! | TCAATATATTAACTAATTAT+GGG | + | chr2_2:54026806-54026825 | None:intergenic | 10.0% |
| !! | AAATATAAAATATTGTCTTA+TGG | - | chr2_2:54027071-54027090 | Msa0258040:CDS | 10.0% |
| !!! | TTTCCTTTGTTTTATTTTAT+CGG | - | chr2_2:54025140-54025159 | Msa0258040:three_prime_UTR | 15.0% |
| !!! | ACTTAATTTGTAAATTTAGT+TGG | + | chr2_2:54026066-54026085 | None:intergenic | 15.0% |
| !! | ACTAGATACATAAATATAAT+TGG | - | chr2_2:54026758-54026777 | Msa0258040:intron | 15.0% |
| !! | CTCAATATATTAACTAATTA+TGG | + | chr2_2:54026807-54026826 | None:intergenic | 15.0% |
| !! | ATATAATTAGAGAAATGTAT+TGG | + | chr2_2:54026931-54026950 | None:intergenic | 15.0% |
| !!! | ATTTTGTACTTGTTTTTTTT+TGG | + | chr2_2:54027042-54027061 | None:intergenic | 15.0% |
| !!! | AATTAATTTATTTTGTAGCT+TGG | - | chr2_2:54027149-54027168 | Msa0258040:CDS | 15.0% |
| !!! | TTCCTTTGTTTTATTTTATC+GGG | - | chr2_2:54025141-54025160 | Msa0258040:three_prime_UTR | 20.0% |
| !! | AGAAAAATGAAGAAAGAAAT+GGG | + | chr2_2:54026018-54026037 | None:intergenic | 20.0% |
| !! | AAGAAAAATGAAGAAAGAAA+TGG | + | chr2_2:54026019-54026038 | None:intergenic | 20.0% |
| !!! | AATCAATAACATCTCTAAAA+CGG | + | chr2_2:54026163-54026182 | None:intergenic | 20.0% |
| !!! | ATTGATTTCTTTTCTTGATA+TGG | - | chr2_2:54026176-54026195 | Msa0258040:intron | 20.0% |
| !!! | AAGAGTTTTTTTTTTTGTTG+TGG | - | chr2_2:54026214-54026233 | Msa0258040:intron | 20.0% |
| !!! | GTTTCCTATAATTTTGTTTT+TGG | - | chr2_2:54026364-54026383 | Msa0258040:intron | 20.0% |
| !!! | TATAATTTTGTTTTTGGCAT+GGG | - | chr2_2:54026370-54026389 | Msa0258040:intron | 20.0% |
| !! | ACACATGATCAAATTATATA+TGG | - | chr2_2:54026523-54026542 | Msa0258040:intron | 20.0% |
| !! | TGAAAAGGAAATTATCAAAA+GGG | - | chr2_2:54026621-54026640 | Msa0258040:intron | 20.0% |
| !!! | AAAATCAATTTCTAAGATGA+TGG | - | chr2_2:54026843-54026862 | Msa0258040:intron | 20.0% |
| !! | AATCTCTATAAAATCTTGAA+TGG | + | chr2_2:54027741-54027760 | None:intergenic | 20.0% |
| ! | TACCCGATAAAATAAAACAA+AGG | + | chr2_2:54025146-54025165 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTTACTTTTTGGG+AGG | + | chr2_2:54025227-54025246 | None:intergenic | 25.0% |
| ! | AGCAGACAAATTTGAAAATT+TGG | - | chr2_2:54025273-54025292 | Msa0258040:exon | 25.0% |
| ! | GCAGACAAATTTGAAAATTT+GGG | - | chr2_2:54025274-54025293 | Msa0258040:exon | 25.0% |
| ! | TTACATTTACAAAGCAATCA+TGG | + | chr2_2:54025702-54025721 | None:intergenic | 25.0% |
| !!! | TGTTTCCATGTTTATTTTGT+AGG | - | chr2_2:54025793-54025812 | Msa0258040:CDS | 25.0% |
| !!! | GTTTCCATGTTTATTTTGTA+GGG | - | chr2_2:54025794-54025813 | Msa0258040:CDS | 25.0% |
| !!! | ATGTGATGGATCAATTTTAT+TGG | - | chr2_2:54025817-54025836 | Msa0258040:CDS | 25.0% |
| ! | TATAATATATGTAAGGTCTG+TGG | + | chr2_2:54026252-54026271 | None:intergenic | 25.0% |
| !! | TGTCTTTTTCTTTCTTACTT+TGG | - | chr2_2:54026277-54026296 | Msa0258040:intron | 25.0% |
| ! | CATGCCAAAAACAAAATTAT+AGG | + | chr2_2:54026371-54026390 | None:intergenic | 25.0% |
| !!! | CTATAATTTTGTTTTTGGCA+TGG | - | chr2_2:54026369-54026388 | Msa0258040:intron | 25.0% |
| ! | GATCAAAAATATGTGAAAAC+AGG | + | chr2_2:54026436-54026455 | None:intergenic | 25.0% |
| ! | AATCACTCATTATACTGAAA+AGG | - | chr2_2:54026606-54026625 | Msa0258040:intron | 25.0% |
| ! | CTGAAAAGGAAATTATCAAA+AGG | - | chr2_2:54026620-54026639 | Msa0258040:intron | 25.0% |
| !!! | GTACTTGTTTTTTTTTGGAA+GGG | + | chr2_2:54027037-54027056 | None:intergenic | 25.0% |
| !!! | TGTACTTGTTTTTTTTTGGA+AGG | + | chr2_2:54027038-54027057 | None:intergenic | 25.0% |
| !!! | TAATTTATTTTGTAGCTTGG+AGG | - | chr2_2:54027152-54027171 | Msa0258040:CDS | 25.0% |
| !!! | AGGACAATTTGATTTTCTTA+AGG | + | chr2_2:54027420-54027439 | None:intergenic | 25.0% |
| ! | TAATTGTTGTCAAAAGTAAC+TGG | + | chr2_2:54027488-54027507 | None:intergenic | 25.0% |
| ! | TTAGAGAATCAAAGTCATAA+AGG | - | chr2_2:54027767-54027786 | Msa0258040:five_prime_UTR | 25.0% |
| !!! | ACAGACAACATATATTTTTG+TGG | + | chr2_2:54027871-54027890 | None:intergenic | 25.0% |
| !!! | TCAAATGTTGCATTGTTTTT+TGG | - | chr2_2:54027935-54027954 | Msa0258040:five_prime_UTR | 25.0% |
| AGATAGTGTAGTAACAAAAG+AGG | + | chr2_2:54025103-54025122 | None:intergenic | 30.0% | |
| AAGGAAAAAGCTGCAAATAA+TGG | + | chr2_2:54025127-54025146 | None:intergenic | 30.0% | |
| GTGAGATAAAGAGAATACAA+TGG | + | chr2_2:54025186-54025205 | None:intergenic | 30.0% | |
| ATAGAGAGAGGAATTTGTAT+AGG | + | chr2_2:54025386-54025405 | None:intergenic | 30.0% | |
| ACTAAGCAATATATAGAGAG+AGG | + | chr2_2:54025398-54025417 | None:intergenic | 30.0% | |
| CAACTTAATCCTAACTTCTA+TGG | - | chr2_2:54025577-54025596 | Msa0258040:CDS | 30.0% | |
| ! | AGCTTCATTATTGATAGCTT+TGG | + | chr2_2:54025647-54025666 | None:intergenic | 30.0% |
| AAGCTATCAATAATGAAGCT+CGG | - | chr2_2:54025647-54025666 | Msa0258040:CDS | 30.0% | |
| ACATCCCTACAAAATAAACA+TGG | + | chr2_2:54025801-54025820 | None:intergenic | 30.0% | |
| !!! | TTTATTTTGTAGGGATGTGA+TGG | - | chr2_2:54025803-54025822 | Msa0258040:CDS | 30.0% |
| GTAAACTATCAACAACACAA+GGG | + | chr2_2:54026044-54026063 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTGTTGTGGTCG+AGG | - | chr2_2:54026220-54026239 | Msa0258040:intron | 30.0% |
| TACGATAAGATTTCAATCTC+CGG | - | chr2_2:54026310-54026329 | Msa0258040:intron | 30.0% | |
| !! | TGTCAACTCTTGTTATTGTA+TGG | - | chr2_2:54026463-54026482 | Msa0258040:intron | 30.0% |
| !! | GTCAACTCTTGTTATTGTAT+GGG | - | chr2_2:54026464-54026483 | Msa0258040:intron | 30.0% |
| ATTATTGTGCAAAATCTGGA+GGG | + | chr2_2:54026491-54026510 | None:intergenic | 30.0% | |
| ATGCATTATTGTGCAAAATC+TGG | + | chr2_2:54026495-54026514 | None:intergenic | 30.0% | |
| ! | TGATCTTTTGATAAAGAGAC+TGG | + | chr2_2:54026584-54026603 | None:intergenic | 30.0% |
| GGGTTCTATTATAAGATGAA+AGG | - | chr2_2:54026641-54026660 | Msa0258040:intron | 30.0% | |
| AATAAGAAAAGATCGGACTA+AGG | + | chr2_2:54026683-54026702 | None:intergenic | 30.0% | |
| GTACAATAGTGTTAAACATG+AGG | + | chr2_2:54026740-54026759 | None:intergenic | 30.0% | |
| ! | TAATTGGTAACACGATTCAT+AGG | - | chr2_2:54026774-54026793 | Msa0258040:intron | 30.0% |
| ACTACCATGTTTAGAAACAA+AGG | - | chr2_2:54027278-54027297 | Msa0258040:intron | 30.0% | |
| !! | TAGACCTTTGTTTCTAAACA+TGG | + | chr2_2:54027285-54027304 | None:intergenic | 30.0% |
| AAATCAAATTGTCCTACTTC+TGG | - | chr2_2:54027425-54027444 | Msa0258040:CDS | 30.0% | |
| AATGACCTTGTTGCTAATAA+AGG | - | chr2_2:54027512-54027531 | Msa0258040:five_prime_UTR | 30.0% | |
| !! | GTGTTGCTTAAATCAATGAA+TGG | - | chr2_2:54027889-54027908 | Msa0258040:five_prime_UTR | 30.0% |
| TTATCGGGTAAGTCAAGTAA+TGG | - | chr2_2:54025156-54025175 | Msa0258040:three_prime_UTR | 35.0% | |
| TATCGGGTAAGTCAAGTAAT+GGG | - | chr2_2:54025157-54025176 | Msa0258040:three_prime_UTR | 35.0% | |
| TGTATAGGCCATTATTGTGA+CGG | + | chr2_2:54025371-54025390 | None:intergenic | 35.0% | |
| AGAGAAGTTATGGAAATGTG+AGG | + | chr2_2:54025447-54025466 | None:intergenic | 35.0% | |
| GCTATCAATGAGAGAAGTTA+TGG | + | chr2_2:54025457-54025476 | None:intergenic | 35.0% | |
| ! | GTTAGGATTAAGTTGTGCAT+TGG | + | chr2_2:54025572-54025591 | None:intergenic | 35.0% |
| CAAGTTCTTCCATAGAAGTT+AGG | + | chr2_2:54025589-54025608 | None:intergenic | 35.0% | |
| ATCAATAATGAAGCTCGGAT+TGG | - | chr2_2:54025652-54025671 | Msa0258040:CDS | 35.0% | |
| ACCTAACAAAAACTCAGCTA+GGG | - | chr2_2:54025877-54025896 | Msa0258040:intron | 35.0% | |
| !!! | AGCTTCAACACTGGTTTTAA+TGG | + | chr2_2:54025921-54025940 | None:intergenic | 35.0% |
| GGTAAACTATCAACAACACA+AGG | + | chr2_2:54026045-54026064 | None:intergenic | 35.0% | |
| CATTATTGTGCAAAATCTGG+AGG | + | chr2_2:54026492-54026511 | None:intergenic | 35.0% | |
| !! | AAGAGACTGGTTGTATTTTG+TGG | + | chr2_2:54026571-54026590 | None:intergenic | 35.0% |
| TGCAAAGTTTGTGTCAATGT+TGG | + | chr2_2:54027396-54027415 | None:intergenic | 35.0% | |
| ! | TTCTGGTGGTGACATAAATT+TGG | - | chr2_2:54027442-54027461 | Msa0258040:CDS | 35.0% |
| GAAGTCCTTTATTAGCAACA+AGG | + | chr2_2:54027520-54027539 | None:intergenic | 35.0% | |
| ! | TCTGATCAAGCTCTTTTCAA+TGG | - | chr2_2:54027545-54027564 | Msa0258040:five_prime_UTR | 35.0% |
| !! | TGTTGGTTCTCAAGTTTCTT+TGG | - | chr2_2:54027568-54027587 | Msa0258040:five_prime_UTR | 35.0% |
| GTTCTCAAGTTTCTTTGGTT+AGG | - | chr2_2:54027573-54027592 | Msa0258040:five_prime_UTR | 35.0% | |
| AGTAGAATTAGTCCTCTAAC+TGG | - | chr2_2:54027656-54027675 | Msa0258040:five_prime_UTR | 35.0% | |
| GTAGAATTAGTCCTCTAACT+GGG | - | chr2_2:54027657-54027676 | Msa0258040:five_prime_UTR | 35.0% | |
| CATAAAGGTTGACTAGATCT+TGG | - | chr2_2:54027782-54027801 | Msa0258040:five_prime_UTR | 35.0% | |
| AGTATGAAGTAGTCGTTGCT+GGG | + | chr2_2:54025069-54025088 | None:intergenic | 40.0% | |
| AAGTATGAAGTAGTCGTTGC+TGG | + | chr2_2:54025070-54025089 | None:intergenic | 40.0% | |
| !! | TACTTTTTGGGAGGAACTTG+TGG | + | chr2_2:54025218-54025237 | None:intergenic | 40.0% |
| TACATGCACCGTCACAATAA+TGG | - | chr2_2:54025360-54025379 | Msa0258040:CDS | 40.0% | |
| ! | ATTTTTCTCACCGGTAAAGG+TGG | + | chr2_2:54025852-54025871 | None:intergenic | 40.0% |
| ! | AGCTGAGTTTTTGTTAGGTG+CGG | + | chr2_2:54025876-54025895 | None:intergenic | 40.0% |
| CACCTAACAAAAACTCAGCT+AGG | - | chr2_2:54025876-54025895 | Msa0258040:intron | 40.0% | |
| CCTAACAAAAACTCAGCTAG+GGG | - | chr2_2:54025878-54025897 | Msa0258040:intron | 40.0% | |
| TTTGCAAGAAGCTTCAACAC+TGG | + | chr2_2:54025930-54025949 | None:intergenic | 40.0% | |
| AATATCAGCACAAGAGACAG+TGG | + | chr2_2:54025954-54025973 | None:intergenic | 40.0% | |
| ! | AGGTTAAAAGAGAGTGTGTG+GGG | + | chr2_2:54026416-54026435 | None:intergenic | 40.0% |
| ! | CAGGTTAAAAGAGAGTGTGT+GGG | + | chr2_2:54026417-54026436 | None:intergenic | 40.0% |
| ! | ACAGGTTAAAAGAGAGTGTG+TGG | + | chr2_2:54026418-54026437 | None:intergenic | 40.0% |
| ! | TCTAAACATGGTAGTGAGTG+TGG | + | chr2_2:54027273-54027292 | None:intergenic | 40.0% |
| AATGACCTTACTGTCCTTTC+TGG | - | chr2_2:54027311-54027330 | Msa0258040:CDS | 40.0% | |
| TTGACATTCTGCTTGACCTA+TGG | + | chr2_2:54027345-54027364 | None:intergenic | 40.0% | |
| TCAAATTGTCCTACTTCTGG+TGG | - | chr2_2:54027428-54027447 | Msa0258040:CDS | 40.0% | |
| TTTATGTCACCACCAGAAGT+AGG | + | chr2_2:54027440-54027459 | None:intergenic | 40.0% | |
| ! | CAAGCTCTTTTCAATGGTGT+TGG | - | chr2_2:54027551-54027570 | Msa0258040:five_prime_UTR | 40.0% |
| GGGAGATTAGAAAGAATTGC+AGG | - | chr2_2:54027687-54027706 | Msa0258040:five_prime_UTR | 40.0% | |
| TGACTAGATCTTGGACACAT+TGG | - | chr2_2:54027791-54027810 | Msa0258040:five_prime_UTR | 40.0% | |
| !! | TTTTTGGGAGGAACTTGTGG+AGG | + | chr2_2:54025215-54025234 | None:intergenic | 45.0% |
| CGCACTATGGTTTGAAGGTT+AGG | + | chr2_2:54025613-54025632 | None:intergenic | 45.0% | |
| ACCTTCAAACCATAGTGCGA+AGG | - | chr2_2:54025614-54025633 | Msa0258040:CDS | 45.0% | |
| CCTTCAAACCATAGTGCGAA+GGG | - | chr2_2:54025615-54025634 | Msa0258040:CDS | 45.0% | |
| ! | GGCATTTTTCTCACCGGTAA+AGG | + | chr2_2:54025855-54025874 | None:intergenic | 45.0% |
| ! | CCCCTAGCTGAGTTTTTGTT+AGG | + | chr2_2:54025881-54025900 | None:intergenic | 45.0% |
| CTAGCACTTGCAACTAGAGA+TGG | - | chr2_2:54025974-54025993 | Msa0258040:intron | 45.0% | |
| GTTACCTGCTTGAGAATGAC+CGG | + | chr2_2:54026332-54026351 | None:intergenic | 45.0% | |
| ! | GTTAAAAGAGAGTGTGTGGG+GGG | + | chr2_2:54026414-54026433 | None:intergenic | 45.0% |
| ! | GGTTAAAAGAGAGTGTGTGG+GGG | + | chr2_2:54026415-54026434 | None:intergenic | 45.0% |
| CTTGCATCTCTTCTTCCAAG+TGG | + | chr2_2:54027194-54027213 | None:intergenic | 45.0% | |
| ATAGGTCAGAAGATGGTCCA+GGG | + | chr2_2:54027250-54027269 | None:intergenic | 45.0% | |
| AGTGTGGATAGGTCAGAAGA+TGG | + | chr2_2:54027257-54027276 | None:intergenic | 45.0% | |
| ! | ACATGGTAGTGAGTGTGGAT+AGG | + | chr2_2:54027268-54027287 | None:intergenic | 45.0% |
| ACTGGAGAGACAGAATCAAG+AGG | + | chr2_2:54027470-54027489 | None:intergenic | 45.0% | |
| AAGAGACTTTGCAGCTGCTA+TGG | - | chr2_2:54027625-54027644 | Msa0258040:five_prime_UTR | 45.0% | |
| AGTCCTCTAACTGGGACTAA+TGG | - | chr2_2:54027665-54027684 | Msa0258040:five_prime_UTR | 45.0% | |
| GTCCTCTAACTGGGACTAAT+GGG | - | chr2_2:54027666-54027685 | Msa0258040:five_prime_UTR | 45.0% | |
| TCCTCTAACTGGGACTAATG+GGG | - | chr2_2:54027667-54027686 | Msa0258040:five_prime_UTR | 45.0% | |
| ! | AGTCGTTGCTGGGTTGAAAG+TGG | + | chr2_2:54025059-54025078 | None:intergenic | 50.0% |
| CCCTTCGCACTATGGTTTGA+AGG | + | chr2_2:54025618-54025637 | None:intergenic | 50.0% | |
| GGTCATTTCCCTTCGCACTA+TGG | + | chr2_2:54025626-54025645 | None:intergenic | 50.0% | |
| GATGACACTGCCACCTTTAC+CGG | - | chr2_2:54025839-54025858 | Msa0258040:intron | 50.0% | |
| ! | AGGTGCGGCATTTTTCTCAC+CGG | + | chr2_2:54025861-54025880 | None:intergenic | 50.0% |
| ATCTCCGGTCATTCTCAAGC+AGG | - | chr2_2:54026325-54026344 | Msa0258040:intron | 50.0% | |
| TCTTCCAAGTGGTACTACCC+AGG | + | chr2_2:54027183-54027202 | None:intergenic | 50.0% | |
| CAGAAGATGGTCCAGGGATT+TGG | + | chr2_2:54027244-54027263 | None:intergenic | 50.0% | |
| GATAGGTCAGAAGATGGTCC+AGG | + | chr2_2:54027251-54027270 | None:intergenic | 50.0% | |
| GTGCACCAGAAAGGACAGTA+AGG | + | chr2_2:54027319-54027338 | None:intergenic | 50.0% | |
| CTATGGTGTGTGCACCAGAA+AGG | + | chr2_2:54027328-54027347 | None:intergenic | 50.0% | |
| ! | CTTTCTGGTGCACACACCAT+AGG | - | chr2_2:54027326-54027345 | Msa0258040:CDS | 50.0% |
| TCCCCATTAGTCCCAGTTAG+AGG | + | chr2_2:54027671-54027690 | None:intergenic | 50.0% | |
| TGTAGCTTGGAGGACCAACC+TGG | - | chr2_2:54027162-54027181 | Msa0258040:CDS | 55.0% | |
| GTAGCTTGGAGGACCAACCT+GGG | - | chr2_2:54027163-54027182 | Msa0258040:CDS | 55.0% | |
| CCAAGTGGTACTACCCAGGT+TGG | + | chr2_2:54027179-54027198 | None:intergenic | 55.0% | |
| CCAACCTGGGTAGTACCACT+TGG | - | chr2_2:54027176-54027195 | Msa0258040:CDS | 55.0% | |
| GCAGCAAACAGCCAAATCCC+TGG | - | chr2_2:54027230-54027249 | Msa0258040:intron | 55.0% | |
| ! | AGAGAGTGTGTGGGGGGACA+TGG | + | chr2_2:54026408-54026427 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 54025049 | 54027963 | 54025049 | ID=Msa0258040;Name=Msa0258040 |
| chr2_2 | mRNA | 54025049 | 54027963 | 54025049 | ID=Msa0258040-mRNA-1;Parent=Msa0258040;Name=Msa0258040-mRNA-1;_AED=0.05;_eAED=0.05;_QI=459|1|1|1|1|1|3|242|318 |
| chr2_2 | exon | 54025049 | 54025845 | 54025049 | ID=Msa0258040-mRNA-1:exon:16273;Parent=Msa0258040-mRNA-1 |
| chr2_2 | exon | 54027006 | 54027197 | 54027006 | ID=Msa0258040-mRNA-1:exon:16272;Parent=Msa0258040-mRNA-1 |
| chr2_2 | exon | 54027295 | 54027963 | 54027295 | ID=Msa0258040-mRNA-1:exon:16271;Parent=Msa0258040-mRNA-1 |
| chr2_2 | five_prime_UTR | 54027505 | 54027963 | 54027505 | ID=Msa0258040-mRNA-1:five_prime_utr;Parent=Msa0258040-mRNA-1 |
| chr2_2 | CDS | 54027295 | 54027504 | 54027295 | ID=Msa0258040-mRNA-1:cds;Parent=Msa0258040-mRNA-1 |
| chr2_2 | CDS | 54027006 | 54027197 | 54027006 | ID=Msa0258040-mRNA-1:cds;Parent=Msa0258040-mRNA-1 |
| chr2_2 | CDS | 54025291 | 54025845 | 54025291 | ID=Msa0258040-mRNA-1:cds;Parent=Msa0258040-mRNA-1 |
| chr2_2 | three_prime_UTR | 54025049 | 54025290 | 54025049 | ID=Msa0258040-mRNA-1:three_prime_utr;Parent=Msa0258040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
