AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1016130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1016130 MtrunA17_Chr7g0229961 100.000 88 0 0 1 88 460 547 3.56e-58 186
Msa1016130 MtrunA17_Chr8g0343421 98.864 88 1 0 1 88 459 546 7.48e-58 185
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1016130 AT4G04770.1 89.773 88 9 0 1 88 470 557 2.84e-53 174
Msa1016130 AT5G44316.1 88.636 88 10 0 1 88 383 470 3.24e-53 172
Msa1016130 AT1G32500.1 40.580 69 41 0 1 69 392 460 1.22e-11 59.3

Find 140 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTGATCTTCACCAATTT+TGG 0.088841 7_1:+31743626 None:intergenic
AATGAGCTTCCCGATGAATT+TGG 0.191847 7_1:-31743525 Msa1016130:CDS
GATTTGGTTAGGAATTATTT+AGG 0.202220 7_1:-31745553 Msa1016130:five_prime_UTR
TCAGTGTGATTCATGCTTAT+TGG 0.217895 7_1:-31744873 Msa1016130:exon
TAGGAGTATGGTGGAGTATT+TGG 0.220424 7_1:-31745353 Msa1016130:five_prime_UTR
TTAATCGAGGGTTTCTTCTT+AGG 0.225416 7_1:+31745775 None:intergenic
GCCATTGGTTCTTGAAATTC+TGG 0.233614 7_1:-31743413 Msa1016130:three_prime_UTR
GATGTTTCATGGATTCTTTC+CGG 0.238350 7_1:+31743292 None:intergenic
GTTTCTGTTGATAATCCTTT+TGG 0.244130 7_1:+31745952 None:intergenic
AGAGAAGCCATGGAGGAAAT+TGG 0.256513 7_1:+31746252 None:intergenic
AAACGATTCTGTTCGTTTAA+CGG 0.286876 7_1:+31745697 None:intergenic
GTTTGAAACTTGATGTTTCA+TGG 0.304729 7_1:+31743281 None:intergenic
GGATAACGGTGATTTGTGTT+TGG 0.304767 7_1:+31746125 None:intergenic
ATTATAGAGATCATACATTA+AGG 0.305403 7_1:+31743259 None:intergenic
CCATCATATATCTTAAAATC+TGG 0.305757 7_1:+31743124 None:intergenic
GATAACGGTGATTTGTGTTT+GGG 0.306425 7_1:+31746126 None:intergenic
CGCGATTACGACAAGAAATT+CGG 0.317548 7_1:-31746006 Msa1016130:five_prime_UTR
AAATAATTCCTAACCAAATC+TGG 0.322490 7_1:+31745556 None:intergenic
GCTTGTTCAGGTTCAGTCTA+AGG 0.336826 7_1:-31744918 Msa1016130:five_prime_UTR
AAATTGGGGAAAATGAAGTT+TGG 0.338766 7_1:+31746268 None:intergenic
AGATTGGGAAGTGGGTTTGA+TGG 0.355909 7_1:+31746157 None:intergenic
GAGAAGCCATGGAGGAAATT+GGG 0.358346 7_1:+31746253 None:intergenic
ATTGTTAGTGTGTTTAATAA+TGG 0.361837 7_1:+31746311 None:intergenic
CTGTTATAGAGGGCTTGTTC+AGG 0.372714 7_1:-31744930 Msa1016130:five_prime_UTR
ATTTGGTTAGGAATTATTTA+GGG 0.377879 7_1:-31745552 Msa1016130:five_prime_UTR
CGTTGATTGTGGCGGATGAT+AGG 0.379139 7_1:-31745372 Msa1016130:five_prime_UTR
GAAGTATCCGAGCGTTGTTT+TGG 0.379206 7_1:-31745101 Msa1016130:five_prime_UTR
TTTCTATTGCAACTACTCAT+AGG 0.386827 7_1:-31745639 Msa1016130:five_prime_UTR
TTAAGATATATGATGGTGAT+TGG 0.387527 7_1:-31743117 Msa1016130:three_prime_UTR
TTCGATTTCGGATGCTGTTA+AGG 0.387550 7_1:-31745584 Msa1016130:five_prime_UTR
AGTATTCGACTGTGCAGAAT+TGG 0.387705 7_1:-31745246 Msa1016130:five_prime_UTR
TGTTAAGGAGTATCCAGATT+TGG 0.388881 7_1:-31745569 Msa1016130:five_prime_UTR
CCCTAAAATCCGAACCTGAT+TGG 0.389746 7_1:-31745912 Msa1016130:five_prime_UTR
GAGGCTAGTACGTCCAAAAT+TGG 0.390303 7_1:-31743639 Msa1016130:CDS
TCTTGTCGTAATCGCGGTTA+CGG 0.398938 7_1:+31746013 None:intergenic
AGGATTAATGCGTTGGAGAC+GGG 0.399896 7_1:-31745409 Msa1016130:five_prime_UTR
GTTGAGTTGTATTGTGGGGA+GGG 0.400958 7_1:-31745280 Msa1016130:five_prime_UTR
AGGAGTATCCAGATTTGGTT+AGG 0.403665 7_1:-31745564 Msa1016130:five_prime_UTR
CTCATGAGCTTGAAGCTTGA+GGG 0.405460 7_1:-31743486 Msa1016130:CDS
CGAAAATGAAAGAACCAAAT+TGG 0.408334 7_1:-31745852 Msa1016130:five_prime_UTR
AATTGGGGAAAATGAAGTTT+GGG 0.411310 7_1:+31746269 None:intergenic
TTGAGTGGGTTGTGGATGTA+AGG 0.416950 7_1:+31746206 None:intergenic
GTTCTCAGAGGTAGTATGTC+TGG 0.418866 7_1:-31743388 Msa1016130:three_prime_UTR
AAGCTGGTTTGAGTGGGTTG+TGG 0.422237 7_1:+31746198 None:intergenic
TATGTGTTATCTGACCAATT+TGG 0.431143 7_1:+31745838 None:intergenic
GCAATGGCTGCTATGATCTC+TGG 0.432036 7_1:-31743567 Msa1016130:CDS
AGATGTGTACATGATGTATA+TGG 0.432178 7_1:-31743363 Msa1016130:three_prime_UTR
TAATTATCAACAGGCTGATA+CGG 0.438638 7_1:-31745032 Msa1016130:five_prime_UTR
TAACTCAGCCCTTACAAAAC+CGG 0.438864 7_1:+31743155 None:intergenic
CGAAAATTGAGCATCCAATC+AGG 0.439256 7_1:+31745898 None:intergenic
AGACTGGGTCCGCGATTACT+TGG 0.440480 7_1:-31745123 Msa1016130:five_prime_UTR
TCGTGCTCAATTCTTGCTGA+TGG 0.448471 7_1:+31743660 None:intergenic
TATATCTTAAAATCTGGGTT+GGG 0.452399 7_1:+31743130 None:intergenic
ATATCCTGAAAATCTATAGT+TGG 0.454284 7_1:+31745814 None:intergenic
TTTGACGAATAATTATCAAC+AGG 0.459812 7_1:-31745041 Msa1016130:five_prime_UTR
GTATTTCTGCTGGACATTCA+AGG 0.462786 7_1:-31744955 Msa1016130:five_prime_UTR
ACGATATGTTTATAAGTGAT+AGG 0.465794 7_1:-31743196 Msa1016130:three_prime_UTR
ATTGAGCATCCAATCAGGTT+CGG 0.471647 7_1:+31745903 None:intergenic
ATATATCTTAAAATCTGGGT+TGG 0.471789 7_1:+31743129 None:intergenic
ATATCGAAGGGTATTTCTGC+TGG 0.472937 7_1:-31744965 Msa1016130:five_prime_UTR
TATCCTGAAAATCTATAGTT+GGG 0.473477 7_1:+31745815 None:intergenic
CGGTTGTTGAGTTGTATTGT+GGG 0.475492 7_1:-31745285 Msa1016130:five_prime_UTR
TGGTATGCGGGTGATGAGAA+TGG 0.481158 7_1:-31745226 Msa1016130:five_prime_UTR
TGTGGCGGATGATAGGAGTA+TGG 0.485495 7_1:-31745365 Msa1016130:five_prime_UTR
CATCATATATCTTAAAATCT+GGG 0.488333 7_1:+31743125 None:intergenic
ATCGGACACTTAACACCCTT+CGG 0.492822 7_1:+31745451 None:intergenic
ACCTCGGAGCCAAATTCATC+GGG 0.494987 7_1:+31743516 None:intergenic
GGGACTAAGATGATACATAA+AGG 0.495409 7_1:-31745010 Msa1016130:five_prime_UTR
CGCGGTTACGGAGAATTTCA+CGG 0.497813 7_1:+31746025 None:intergenic
CATTCAAGGAACTGTTATAG+AGG 0.498044 7_1:-31744941 Msa1016130:five_prime_UTR
GATTCTTTCACAATTCCAAA+AGG 0.499044 7_1:-31745967 Msa1016130:five_prime_UTR
TATGTTTATAAGTGATAGGC+AGG 0.500021 7_1:-31743192 Msa1016130:three_prime_UTR
TTTGAATTAGCTCAGGCCAT+TGG 0.506299 7_1:-31743428 Msa1016130:three_prime_UTR
TTGTCATCGGTAGATGAAGT+TGG 0.506952 7_1:+31746051 None:intergenic
AATTATCAACAGGCTGATAC+GGG 0.507180 7_1:-31745031 Msa1016130:five_prime_UTR
GGTGATGAGAATGGGAAAGG+TGG 0.510158 7_1:-31745217 Msa1016130:five_prime_UTR
TGTTGAGTTGTATTGTGGGG+AGG 0.511336 7_1:-31745281 Msa1016130:five_prime_UTR
TCGAAGTATCTCAAAAGCTC+AGG 0.512282 7_1:+31745733 None:intergenic
TTCATGGATTCTTTCCGGCA+TGG 0.515831 7_1:+31743297 None:intergenic
TTGAGATACTTCGATAAGCT+CGG 0.521652 7_1:-31745724 Msa1016130:five_prime_UTR
TAGGATTAATGCGTTGGAGA+CGG 0.522422 7_1:-31745410 Msa1016130:five_prime_UTR
TAACGGTGATTTGTGTTTGG+GGG 0.522817 7_1:+31746128 None:intergenic
ACTCATGAGCTTGAAGCTTG+AGG 0.525889 7_1:-31743487 Msa1016130:CDS
TTTGAGAAGCTGGTTTGAGT+GGG 0.526103 7_1:+31746192 None:intergenic
CGTGGACTCAGGTGGAGACT+GGG 0.526944 7_1:-31745138 Msa1016130:five_prime_UTR
CACCTCGGAGCCAAATTCAT+CGG 0.533895 7_1:+31743515 None:intergenic
TAGGGCTGAGATTAAACGAA+TGG 0.540218 7_1:+31745930 None:intergenic
ATTTGAGAGGACGTTGATTG+TGG 0.541228 7_1:-31745383 Msa1016130:five_prime_UTR
TTCTTCTAAGCTATTAATCG+AGG 0.547950 7_1:+31745762 None:intergenic
GTGATGAGAATGGGAAAGGT+GGG 0.548593 7_1:-31745216 Msa1016130:five_prime_UTR
CAAGCTTCAAGCTCATGAGT+TGG 0.553479 7_1:+31743490 None:intergenic
GGATTAATGCGTTGGAGACG+GGG 0.554424 7_1:-31745408 Msa1016130:five_prime_UTR
GGTATGCGGGTGATGAGAAT+GGG 0.557534 7_1:-31745225 Msa1016130:five_prime_UTR
TTGGAGGGTGATGAGAGTGT+TGG 0.558769 7_1:-31745082 Msa1016130:five_prime_UTR
AGGAAGACACTTGAGAAGGC+TGG 0.560350 7_1:-31745619 Msa1016130:five_prime_UTR
TCACCCTCCAAAACAACGCT+CGG 0.561244 7_1:+31745094 None:intergenic
TCCATGGCTTCTCTTCTCAA+CGG 0.561678 7_1:-31746243 Msa1016130:five_prime_UTR
AAAGAGTAGGATAATATCGA+AGG 0.564748 7_1:-31744978 Msa1016130:five_prime_UTR
GCGGTTGTTGAGTTGTATTG+TGG 0.564872 7_1:-31745286 Msa1016130:five_prime_UTR
GCCGTTGAGAAGAGAAGCCA+TGG 0.565553 7_1:+31746242 None:intergenic
ATAACGGTGATTTGTGTTTG+GGG 0.566138 7_1:+31746127 None:intergenic
CGCATTAATCCTAAAATACG+TGG 0.567141 7_1:+31745420 None:intergenic
TCTTCTAAGCTATTAATCGA+GGG 0.569205 7_1:+31745763 None:intergenic
TCCAGAATTTCAAGAACCAA+TGG 0.570798 7_1:+31743412 None:intergenic
GTCGAAGATATCGTGGACTC+AGG 0.570802 7_1:-31745149 Msa1016130:five_prime_UTR
AAGGAAAGAATACAAAGAGT+AGG 0.571457 7_1:-31744991 Msa1016130:five_prime_UTR
TGGAGACGGGGCAATTTGAG+AGG 0.580773 7_1:-31745396 Msa1016130:five_prime_UTR
GCGGGTGATGAGAATGGGAA+AGG 0.581778 7_1:-31745220 Msa1016130:five_prime_UTR
AGAAGCCATGGAGGAAATTG+GGG 0.587138 7_1:+31746254 None:intergenic
GAATACATATCCTTACATCC+AGG 0.591093 7_1:-31744835 Msa1016130:intron
AGTATGGTGGAGTATTTGGA+AGG 0.598035 7_1:-31745349 Msa1016130:five_prime_UTR
ATTCAAGGAACTGTTATAGA+GGG 0.600696 7_1:-31744940 Msa1016130:five_prime_UTR
TCATGAGCTTGAAGCTTGAG+GGG 0.600976 7_1:-31743485 Msa1016130:CDS
TTGAAGCTTGAGGGGTCAGT+CGG 0.603318 7_1:-31743477 Msa1016130:CDS
AAGAGTAGGATAATATCGAA+GGG 0.614934 7_1:-31744977 Msa1016130:five_prime_UTR
AAATACGTGGATATCTGCAT+CGG 0.617924 7_1:+31745433 None:intergenic
GAAGATATCGTGGACTCAGG+TGG 0.621504 7_1:-31745146 Msa1016130:five_prime_UTR
ACGAAGAGAGGATTGTGTGC+TGG 0.622028 7_1:-31745178 Msa1016130:five_prime_UTR
TTATTACGCTGCATTGAATG+CGG 0.624878 7_1:-31745506 Msa1016130:five_prime_UTR
TCCCGATGAATTTGGCTCCG+AGG 0.627231 7_1:-31743517 Msa1016130:CDS
GTAAGAAGTCGAAGATATCG+TGG 0.634199 7_1:-31745156 Msa1016130:five_prime_UTR
CGAATTTCTTGTCGTAATCG+CGG 0.638662 7_1:+31746007 None:intergenic
ACTGTGCAGAATTGGTATGC+GGG 0.639721 7_1:-31745238 Msa1016130:five_prime_UTR
GGCGGATGATAGGAGTATGG+TGG 0.641159 7_1:-31745362 Msa1016130:five_prime_UTR
GTTCGTAACTAACGTCTGAA+CGG 0.647103 7_1:+31746088 None:intergenic
GCTCATGAGTTGGTTCACCT+CGG 0.650340 7_1:+31743500 None:intergenic
GCGTAATAATTATCATCACT+AGG 0.656830 7_1:+31745520 None:intergenic
GACTGTGCAGAATTGGTATG+CGG 0.657058 7_1:-31745239 Msa1016130:five_prime_UTR
TCATAGGAAGACACTTGAGA+AGG 0.657651 7_1:-31745623 Msa1016130:five_prime_UTR
TGTTCAGGTTCAGTCTAAGG+CGG 0.659200 7_1:-31744915 Msa1016130:five_prime_UTR
GAAGCTCATTGAAGACATCA+CGG 0.661065 7_1:+31743538 None:intergenic
GAATCGTTTAGCGAATGTTG+CGG 0.668424 7_1:-31745683 Msa1016130:five_prime_UTR
GTATGGTGGAGTATTTGGAA+GGG 0.671768 7_1:-31745348 Msa1016130:five_prime_UTR
TGAGAGGACGTTGATTGTGG+CGG 0.679907 7_1:-31745380 Msa1016130:five_prime_UTR
GAAATTCTGGAAGTTCTCAG+AGG 0.690573 7_1:-31743400 Msa1016130:three_prime_UTR
ATCAGCAAGAATTGAGCACG+AGG 0.694946 7_1:-31743658 Msa1016130:CDS
CGGATACTTCCAAGTAATCG+CGG 0.697357 7_1:+31745114 None:intergenic
GTTGAGAAGAGAAGCCATGG+AGG 0.706539 7_1:+31746245 None:intergenic
GGTTGTTGAGTTGTATTGTG+GGG 0.708201 7_1:-31745284 Msa1016130:five_prime_UTR
ATTATCAACAGGCTGATACG+GGG 0.731328 7_1:-31745030 Msa1016130:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATAGCAATTAATTAT+GGG - chr7_1:31745017-31745036 Msa1016130:five_prime_UTR 10.0%
!! GATAAAATAGCAATTAATTA+TGG - chr7_1:31745016-31745035 Msa1016130:five_prime_UTR 15.0%
!!! TGTTATATTTTGTTCGATTT+CGG - chr7_1:31743811-31743830 Msa1016130:intron 20.0%
!! ATTTGGTTAGGAATTATTTA+GGG - chr7_1:31743855-31743874 Msa1016130:intron 20.0%
!! CAGTTAATAATTAATGTCTA+TGG - chr7_1:31744643-31744662 Msa1016130:intron 20.0%
!! AATAATTAATGTCTATGGAT+CGG - chr7_1:31744648-31744667 Msa1016130:intron 20.0%
!! TAGATAACGATAAGAATATA+TGG - chr7_1:31744676-31744695 Msa1016130:intron 20.0%
!! AGATAACGATAAGAATATAT+GGG - chr7_1:31744677-31744696 Msa1016130:intron 20.0%
!!! TTGGATATATTTTCTAAGAT+TGG - chr7_1:31744745-31744764 Msa1016130:intron 20.0%
!! TCTATATTAGTATTACTTCA+AGG + chr7_1:31744975-31744994 None:intergenic 20.0%
!!! AATTGATTCGTTTAAATTCA+AGG + chr7_1:31745053-31745072 None:intergenic 20.0%
!! TTTAATCAAGTATGAAAACA+GGG + chr7_1:31745376-31745395 None:intergenic 20.0%
!! ATTTAATCAAGTATGAAAAC+AGG + chr7_1:31745377-31745396 None:intergenic 20.0%
!! CAAAGATTTCATCAATAATA+TGG - chr7_1:31745545-31745564 Msa1016130:five_prime_UTR 20.0%
!! CATTACAAATATGGAAAAAA+GGG + chr7_1:31745666-31745685 None:intergenic 20.0%
!! ACATTACAAATATGGAAAAA+AGG + chr7_1:31745667-31745686 None:intergenic 20.0%
!!! TTATTTTACTTTCAACAAAG+AGG - chr7_1:31745801-31745820 Msa1016130:five_prime_UTR 20.0%
!! ATTATAGAGATCATACATTA+AGG + chr7_1:31746151-31746170 None:intergenic 20.0%
!! CATCATATATCTTAAAATCT+GGG + chr7_1:31746285-31746304 None:intergenic 20.0%
!!! ATTTTAACGGTTTTGGATAA+CGG + chr7_1:31743299-31743318 None:intergenic 25.0%
! TATCCTGAAAATCTATAGTT+GGG + chr7_1:31743595-31743614 None:intergenic 25.0%
! ATATCCTGAAAATCTATAGT+TGG + chr7_1:31743596-31743615 None:intergenic 25.0%
! AAATAATTCCTAACCAAATC+TGG + chr7_1:31743854-31743873 None:intergenic 25.0%
!! GATTTGGTTAGGAATTATTT+AGG - chr7_1:31743854-31743873 Msa1016130:intron 25.0%
!! ATTTTTATCATAAGAAGGTG+CGG + chr7_1:31744089-31744108 None:intergenic 25.0%
!!! AGCTGATTTTTATCATAAGA+AGG + chr7_1:31744094-31744113 None:intergenic 25.0%
!! TATAATTTTGTTACGAAGAG+AGG - chr7_1:31744217-31744236 Msa1016130:intron 25.0%
! TTTGACGAATAATTATCAAC+AGG - chr7_1:31744366-31744385 Msa1016130:intron 25.0%
! GAACAAAAAAAAAAGTTACC+TGG + chr7_1:31744593-31744612 None:intergenic 25.0%
! AATTATGTAACAATAGAGCA+TGG + chr7_1:31744826-31744845 None:intergenic 25.0%
! TTTCATCTATAACTTGAAAC+TGG + chr7_1:31744951-31744970 None:intergenic 25.0%
! AATATTAATCCTGATTGTGT+TGG - chr7_1:31744994-31745013 Msa1016130:five_prime_UTR 25.0%
! CGTTTAAATTCAAGGATTAT+TGG + chr7_1:31745045-31745064 None:intergenic 25.0%
! CTATGATTTAAGAACTACAT+GGG - chr7_1:31745209-31745228 Msa1016130:five_prime_UTR 25.0%
!! TTGATTAAATACAGCTTTGT+TGG - chr7_1:31745387-31745406 Msa1016130:five_prime_UTR 25.0%
! AATAGACTATGAAAAAGCAA+TGG - chr7_1:31745824-31745843 Msa1016130:five_prime_UTR 25.0%
!!! TCATTATTTTGAATTAGCTC+AGG - chr7_1:31745972-31745991 Msa1016130:five_prime_UTR 25.0%
! ACGATATGTTTATAAGTGAT+AGG - chr7_1:31746211-31746230 Msa1016130:five_prime_UTR 25.0%
! TATATCTTAAAATCTGGGTT+GGG + chr7_1:31746280-31746299 None:intergenic 25.0%
! ATATATCTTAAAATCTGGGT+TGG + chr7_1:31746281-31746300 None:intergenic 25.0%
! CCATCATATATCTTAAAATC+TGG + chr7_1:31746286-31746305 None:intergenic 25.0%
!!! CCAGATTTTAAGATATATGA+TGG - chr7_1:31746283-31746302 Msa1016130:five_prime_UTR 25.0%
!! TTAAGATATATGATGGTGAT+TGG - chr7_1:31746290-31746309 Msa1016130:five_prime_UTR 25.0%
! AATGAAGTTTGGGAATTTTG+TGG + chr7_1:31743131-31743150 None:intergenic 30.0%
AATTGGGGAAAATGAAGTTT+GGG + chr7_1:31743141-31743160 None:intergenic 30.0%
AAATTGGGGAAAATGAAGTT+TGG + chr7_1:31743142-31743161 None:intergenic 30.0%
! AATTTCACGGATTTTGTCAT+CGG + chr7_1:31743372-31743391 None:intergenic 30.0%
GATTCTTTCACAATTCCAAA+AGG - chr7_1:31743440-31743459 Msa1016130:three_prime_UTR 30.0%
!!! GTTTCTGTTGATAATCCTTT+TGG + chr7_1:31743458-31743477 None:intergenic 30.0%
CGAAAATGAAAGAACCAAAT+TGG - chr7_1:31743555-31743574 Msa1016130:CDS 30.0%
TATGTGTTATCTGACCAATT+TGG + chr7_1:31743572-31743591 None:intergenic 30.0%
! ATACCCAACTATAGATTTTC+AGG - chr7_1:31743589-31743608 Msa1016130:CDS 30.0%
TCTTCTAAGCTATTAATCGA+GGG + chr7_1:31743647-31743666 None:intergenic 30.0%
TTCTTCTAAGCTATTAATCG+AGG + chr7_1:31743648-31743667 None:intergenic 30.0%
AAACGATTCTGTTCGTTTAA+CGG + chr7_1:31743713-31743732 None:intergenic 30.0%
TTTCTATTGCAACTACTCAT+AGG - chr7_1:31743768-31743787 Msa1016130:intron 30.0%
GCGTAATAATTATCATCACT+AGG + chr7_1:31743890-31743909 None:intergenic 30.0%
!! TCGTTTTGTTATATACCGAA+GGG - chr7_1:31743941-31743960 Msa1016130:intron 30.0%
!!! GTATTTTAGGATTAATGCGT+TGG - chr7_1:31743991-31744010 Msa1016130:intron 30.0%
TAATTATCAACAGGCTGATA+CGG - chr7_1:31744375-31744394 Msa1016130:intron 30.0%
AAGGAAAGAATACAAAGAGT+AGG - chr7_1:31744416-31744435 Msa1016130:intron 30.0%
AAAGAGTAGGATAATATCGA+AGG - chr7_1:31744429-31744448 Msa1016130:intron 30.0%
AAGAGTAGGATAATATCGAA+GGG - chr7_1:31744430-31744449 Msa1016130:intron 30.0%
ATTCAAGGAACTGTTATAGA+GGG - chr7_1:31744467-31744486 Msa1016130:intron 30.0%
AAAAAAGTTACCTGGATGTA+AGG + chr7_1:31744585-31744604 None:intergenic 30.0%
!! CTAAGATTGGTTTCTCTATA+TGG - chr7_1:31744758-31744777 Msa1016130:intron 30.0%
! CTATTTTATCCAACACAATC+AGG + chr7_1:31745006-31745025 None:intergenic 30.0%
GCATGAACATATGTATGATT+TGG + chr7_1:31745122-31745141 None:intergenic 30.0%
GCTATGATTTAAGAACTACA+TGG - chr7_1:31745208-31745227 Msa1016130:five_prime_UTR 30.0%
!! AACAATTTCTAGTGTTCTTC+TGG + chr7_1:31745305-31745324 None:intergenic 30.0%
ACTAGAAATTGTTAGTATCC+TGG - chr7_1:31745312-31745331 Msa1016130:five_prime_UTR 30.0%
AAAACAGGGTGATAAAAATC+AGG + chr7_1:31745362-31745381 None:intergenic 30.0%
!!! GACCAAAAATGGATTAGTTT+TGG + chr7_1:31745471-31745490 None:intergenic 30.0%
!!! ATTTTTGGTCTTTGATACCT+CGG - chr7_1:31745481-31745500 Msa1016130:five_prime_UTR 30.0%
ATAAGGAAAAGGAAACAAGA+TGG + chr7_1:31745638-31745657 None:intergenic 30.0%
AAAGGGTGAAAATAAGGAAA+AGG + chr7_1:31745649-31745668 None:intergenic 30.0%
TGGAAAAAAGGGTGAAAATA+AGG + chr7_1:31745655-31745674 None:intergenic 30.0%
! GTTTCTGGACATTACAAATA+TGG + chr7_1:31745675-31745694 None:intergenic 30.0%
!! TGAAATTGCAATTGTTTTGC+AGG - chr7_1:31745716-31745735 Msa1016130:five_prime_UTR 30.0%
! TAACTGATCTTCACCAATTT+TGG + chr7_1:31745784-31745803 None:intergenic 30.0%
AGATGTGTACATGATGTATA+TGG - chr7_1:31746044-31746063 Msa1016130:five_prime_UTR 30.0%
! GTTTGAAACTTGATGTTTCA+TGG + chr7_1:31746129-31746148 None:intergenic 30.0%
TATGTTTATAAGTGATAGGC+AGG - chr7_1:31746215-31746234 Msa1016130:five_prime_UTR 30.0%
!! TTACAAAACCGGCTTTTAAA+AGG + chr7_1:31746244-31746263 None:intergenic 30.0%
!! TTTTAAAAGCCGGTTTTGTA+AGG - chr7_1:31746243-31746262 Msa1016130:five_prime_UTR 30.0%
!! TTTAAAAGCCGGTTTTGTAA+GGG - chr7_1:31746244-31746263 Msa1016130:five_prime_UTR 30.0%
!!! AAGTGCTTTTTTTGAGAAGC+TGG + chr7_1:31743228-31743247 None:intergenic 35.0%
! ATAACGGTGATTTGTGTTTG+GGG + chr7_1:31743283-31743302 None:intergenic 35.0%
! GATAACGGTGATTTGTGTTT+GGG + chr7_1:31743284-31743303 None:intergenic 35.0%
!! TGAACGGATTTTAACGGTTT+TGG + chr7_1:31743306-31743325 None:intergenic 35.0%
!! AACGTCTGAACGGATTTTAA+CGG + chr7_1:31743312-31743331 None:intergenic 35.0%
TTAATCGAGGGTTTCTTCTT+AGG + chr7_1:31743635-31743654 None:intergenic 35.0%
TTGAGATACTTCGATAAGCT+CGG - chr7_1:31743683-31743702 Msa1016130:intron 35.0%
!! TGTTAAGGAGTATCCAGATT+TGG - chr7_1:31743838-31743857 Msa1016130:intron 35.0%
TTATTACGCTGCATTGAATG+CGG - chr7_1:31743901-31743920 Msa1016130:intron 35.0%
!! GTCGTTTTGTTATATACCGA+AGG - chr7_1:31743940-31743959 Msa1016130:intron 35.0%
AAATACGTGGATATCTGCAT+CGG + chr7_1:31743977-31743996 None:intergenic 35.0%
! TGCAGATATCCACGTATTTT+AGG - chr7_1:31743978-31743997 Msa1016130:intron 35.0%
CGCATTAATCCTAAAATACG+TGG + chr7_1:31743990-31744009 None:intergenic 35.0%
TAAAAATCAGCTTCATGCTG+CGG - chr7_1:31744102-31744121 Msa1016130:intron 35.0%
!!! GAGTGTTGGAGAGTTTTATT+CGG - chr7_1:31744339-31744358 Msa1016130:intron 35.0%
AATTATCAACAGGCTGATAC+GGG - chr7_1:31744376-31744395 Msa1016130:intron 35.0%
GGGACTAAGATGATACATAA+AGG - chr7_1:31744397-31744416 Msa1016130:intron 35.0%
CATTCAAGGAACTGTTATAG+AGG - chr7_1:31744466-31744485 Msa1016130:intron 35.0%
TCAGTGTGATTCATGCTTAT+TGG - chr7_1:31744534-31744553 Msa1016130:intron 35.0%
GAATACATATCCTTACATCC+AGG - chr7_1:31744572-31744591 Msa1016130:intron 35.0%
AAGCAAATCCAATAAGACAC+AGG + chr7_1:31744864-31744883 None:intergenic 35.0%
!!! TATTGTTTTGACAACTGTGG+TGG - chr7_1:31745174-31745193 Msa1016130:five_prime_UTR 35.0%
!!! ATTGTTTTGACAACTGTGGT+GGG - chr7_1:31745175-31745194 Msa1016130:five_prime_UTR 35.0%
ACAGAATATCAGTGCTTCTT+CGG - chr7_1:31745251-31745270 Msa1016130:five_prime_UTR 35.0%
! GAGCTTTTTGATGTTGAGTT+TGG - chr7_1:31745334-31745353 Msa1016130:five_prime_UTR 35.0%
! GTGTCTTTTATTCTGTTTCC+TGG - chr7_1:31745442-31745461 Msa1016130:five_prime_UTR 35.0%
! TCTTTTATTCTGTTTCCTGG+TGG - chr7_1:31745445-31745464 Msa1016130:five_prime_UTR 35.0%
! GGCCAAAACTAATCCATTTT+TGG - chr7_1:31745466-31745485 Msa1016130:five_prime_UTR 35.0%
! GAGGTATCAAAGACCAAAAA+TGG + chr7_1:31745482-31745501 None:intergenic 35.0%
AGTGGAAGTTAACTCTGATA+TGG + chr7_1:31745611-31745630 None:intergenic 35.0%
TTTCATGAGTACAAGTCTCA+TGG + chr7_1:31745701-31745720 None:intergenic 35.0%
TCCAGAATTTCAAGAACCAA+TGG + chr7_1:31745998-31746017 None:intergenic 35.0%
GATGTTTCATGGATTCTTTC+CGG + chr7_1:31746118-31746137 None:intergenic 35.0%
! ATTTTCCCCAATTTCCTCCA+TGG - chr7_1:31743148-31743167 Msa1016130:three_prime_UTR 40.0%
!! TTTGAGAAGCTGGTTTGAGT+GGG + chr7_1:31743218-31743237 None:intergenic 40.0%
!!! TTTTGAGAAGCTGGTTTGAG+TGG + chr7_1:31743219-31743238 None:intergenic 40.0%
!!! GGTTTTTGAGATTGGGAAGT+GGG + chr7_1:31743261-31743280 None:intergenic 40.0%
!!! GTTTGGGGGTTTTTGAGATT+GGG + chr7_1:31743268-31743287 None:intergenic 40.0%
!!! TGTTTGGGGGTTTTTGAGAT+TGG + chr7_1:31743269-31743288 None:intergenic 40.0%
! TAACGGTGATTTGTGTTTGG+GGG + chr7_1:31743282-31743301 None:intergenic 40.0%
! GGATAACGGTGATTTGTGTT+TGG + chr7_1:31743285-31743304 None:intergenic 40.0%
GTTCGTAACTAACGTCTGAA+CGG + chr7_1:31743322-31743341 None:intergenic 40.0%
TTGTCATCGGTAGATGAAGT+TGG + chr7_1:31743359-31743378 None:intergenic 40.0%
CGAATTTCTTGTCGTAATCG+CGG + chr7_1:31743403-31743422 None:intergenic 40.0%
CGCGATTACGACAAGAAATT+CGG - chr7_1:31743401-31743420 Msa1016130:three_prime_UTR 40.0%
TAGGGCTGAGATTAAACGAA+TGG + chr7_1:31743480-31743499 None:intergenic 40.0%
! CCAATCAGGTTCGGATTTTA+GGG + chr7_1:31743498-31743517 None:intergenic 40.0%
! TCCAATCAGGTTCGGATTTT+AGG + chr7_1:31743499-31743518 None:intergenic 40.0%
ATTGAGCATCCAATCAGGTT+CGG + chr7_1:31743507-31743526 None:intergenic 40.0%
CGAAAATTGAGCATCCAATC+AGG + chr7_1:31743512-31743531 None:intergenic 40.0%
! TCGAAGTATCTCAAAAGCTC+AGG + chr7_1:31743677-31743696 None:intergenic 40.0%
GAATCGTTTAGCGAATGTTG+CGG - chr7_1:31743724-31743743 Msa1016130:intron 40.0%
TCATAGGAAGACACTTGAGA+AGG - chr7_1:31743784-31743803 Msa1016130:intron 40.0%
TTCGATTTCGGATGCTGTTA+AGG - chr7_1:31743823-31743842 Msa1016130:intron 40.0%
!! AGGAGTATCCAGATTTGGTT+AGG - chr7_1:31743843-31743862 Msa1016130:intron 40.0%
!!! AATGCGGCTGTTTTTAGTGA+CGG - chr7_1:31743917-31743936 Msa1016130:intron 40.0%
TAGGATTAATGCGTTGGAGA+CGG - chr7_1:31743997-31744016 Msa1016130:intron 40.0%
! ATTTGAGAGGACGTTGATTG+TGG - chr7_1:31744024-31744043 Msa1016130:intron 40.0%
! TAGGAGTATGGTGGAGTATT+TGG - chr7_1:31744054-31744073 Msa1016130:intron 40.0%
! AGTATGGTGGAGTATTTGGA+AGG - chr7_1:31744058-31744077 Msa1016130:intron 40.0%
! GTATGGTGGAGTATTTGGAA+GGG - chr7_1:31744059-31744078 Msa1016130:intron 40.0%
! CGGTTGTTGAGTTGTATTGT+GGG - chr7_1:31744122-31744141 Msa1016130:intron 40.0%
! GGTTGTTGAGTTGTATTGTG+GGG - chr7_1:31744123-31744142 Msa1016130:intron 40.0%
AGTATTCGACTGTGCAGAAT+TGG - chr7_1:31744161-31744180 Msa1016130:intron 40.0%
GTAAGAAGTCGAAGATATCG+TGG - chr7_1:31744251-31744270 Msa1016130:intron 40.0%
ATTATCAACAGGCTGATACG+GGG - chr7_1:31744377-31744396 Msa1016130:intron 40.0%
!! ATATCGAAGGGTATTTCTGC+TGG - chr7_1:31744442-31744461 Msa1016130:intron 40.0%
! GTATTTCTGCTGGACATTCA+AGG - chr7_1:31744452-31744471 Msa1016130:intron 40.0%
CCATGAAGTATGCATGAACA+CGG + chr7_1:31744720-31744739 None:intergenic 40.0%
TGCATACTTCATGGACACTT+TGG - chr7_1:31744726-31744745 Msa1016130:intron 40.0%
TCCTCTTACCTGTGTCTTAT+TGG - chr7_1:31744853-31744872 Msa1016130:CDS 40.0%
TCCAATAAGACACAGGTAAG+AGG + chr7_1:31744857-31744876 None:intergenic 40.0%
ATCCGTGGTGTTTAGTTGAA+AGG - chr7_1:31744891-31744910 Msa1016130:five_prime_UTR 40.0%
TCCGTGGTGTTTAGTTGAAA+GGG - chr7_1:31744892-31744911 Msa1016130:five_prime_UTR 40.0%
TGCCTTGTATAAGCACAACA+TGG - chr7_1:31745139-31745158 Msa1016130:five_prime_UTR 40.0%
CACCATGTTGTGCTTATACA+AGG + chr7_1:31745144-31745163 None:intergenic 40.0%
!!! GGCTATTGTTTTGACAACTG+TGG - chr7_1:31745171-31745190 Msa1016130:five_prime_UTR 40.0%
!! AACTGTGGTGGGCAAATATA+CGG - chr7_1:31745186-31745205 Msa1016130:five_prime_UTR 40.0%
ACTCAACATCAAAAAGCTCC+AGG + chr7_1:31745333-31745352 None:intergenic 40.0%
TGGTTGCAGTCTATTGTTGT+TGG - chr7_1:31745513-31745532 Msa1016130:five_prime_UTR 40.0%
AGGAAAAGGAAACAAGATGG+AGG + chr7_1:31745635-31745654 None:intergenic 40.0%
GAAGCTCATTGAAGACATCA+CGG + chr7_1:31745872-31745891 None:intergenic 40.0%
AATGAGCTTCCCGATGAATT+TGG - chr7_1:31745882-31745901 Msa1016130:five_prime_UTR 40.0%
TTTGAATTAGCTCAGGCCAT+TGG - chr7_1:31745979-31745998 Msa1016130:five_prime_UTR 40.0%
!! GCCATTGGTTCTTGAAATTC+TGG - chr7_1:31745994-31746013 Msa1016130:five_prime_UTR 40.0%
! GAAATTCTGGAAGTTCTCAG+AGG - chr7_1:31746007-31746026 Msa1016130:five_prime_UTR 40.0%
!! GATTTTGTCTAGAACCATGC+CGG - chr7_1:31746096-31746115 Msa1016130:five_prime_UTR 40.0%
!! CAAAACCGGCTTTTAAAAGG+TGG + chr7_1:31746241-31746260 None:intergenic 40.0%
TAACTCAGCCCTTACAAAAC+CGG + chr7_1:31746255-31746274 None:intergenic 40.0%
AGAAGCCATGGAGGAAATTG+GGG + chr7_1:31743156-31743175 None:intergenic 45.0%
GAGAAGCCATGGAGGAAATT+GGG + chr7_1:31743157-31743176 None:intergenic 45.0%
AGAGAAGCCATGGAGGAAAT+TGG + chr7_1:31743158-31743177 None:intergenic 45.0%
TCCATGGCTTCTCTTCTCAA+CGG - chr7_1:31743164-31743183 Msa1016130:three_prime_UTR 45.0%
!! TTGAGTGGGTTGTGGATGTA+AGG + chr7_1:31743204-31743223 None:intergenic 45.0%
! AGATTGGGAAGTGGGTTTGA+TGG + chr7_1:31743253-31743272 None:intergenic 45.0%
!!! GGGTTTTTGAGATTGGGAAG+TGG + chr7_1:31743262-31743281 None:intergenic 45.0%
TCTTGTCGTAATCGCGGTTA+CGG + chr7_1:31743397-31743416 None:intergenic 45.0%
CCCTAAAATCCGAACCTGAT+TGG - chr7_1:31743495-31743514 Msa1016130:CDS 45.0%
!!! ATGCGGCTGTTTTTAGTGAC+GGG - chr7_1:31743918-31743937 Msa1016130:intron 45.0%
ATCGGACACTTAACACCCTT+CGG + chr7_1:31743959-31743978 None:intergenic 45.0%
AGGATTAATGCGTTGGAGAC+GGG - chr7_1:31743998-31744017 Msa1016130:intron 45.0%
! GCGGTTGTTGAGTTGTATTG+TGG - chr7_1:31744121-31744140 Msa1016130:intron 45.0%
! TGTTGAGTTGTATTGTGGGG+AGG - chr7_1:31744126-31744145 Msa1016130:intron 45.0%
! GTTGAGTTGTATTGTGGGGA+GGG - chr7_1:31744127-31744146 Msa1016130:intron 45.0%
GACTGTGCAGAATTGGTATG+CGG - chr7_1:31744168-31744187 Msa1016130:intron 45.0%
ACTGTGCAGAATTGGTATGC+GGG - chr7_1:31744169-31744188 Msa1016130:intron 45.0%
GTGATGAGAATGGGAAAGGT+GGG - chr7_1:31744191-31744210 Msa1016130:intron 45.0%
CGGATACTTCCAAGTAATCG+CGG + chr7_1:31744296-31744315 None:intergenic 45.0%
!! GAAGTATCCGAGCGTTGTTT+TGG - chr7_1:31744306-31744325 Msa1016130:intron 45.0%
!!! TATCCGAGCGTTGTTTTGGA+GGG - chr7_1:31744310-31744329 Msa1016130:intron 45.0%
! CTGTTATAGAGGGCTTGTTC+AGG - chr7_1:31744477-31744496 Msa1016130:intron 45.0%
! GCTTGTTCAGGTTCAGTCTA+AGG - chr7_1:31744489-31744508 Msa1016130:intron 45.0%
! TGTTCAGGTTCAGTCTAAGG+CGG - chr7_1:31744492-31744511 Msa1016130:intron 45.0%
CCGTGTTCATGCATACTTCA+TGG - chr7_1:31744717-31744736 Msa1016130:intron 45.0%
ATTTGCTTGTCCTGTATCCG+TGG - chr7_1:31744876-31744895 Msa1016130:exon 45.0%
CAACTAAACACCACGGATAC+AGG + chr7_1:31744889-31744908 None:intergenic 45.0%
CCCCTTTCAACTAAACACCA+CGG + chr7_1:31744896-31744915 None:intergenic 45.0%
CCGTGGTGTTTAGTTGAAAG+GGG - chr7_1:31744893-31744912 Msa1016130:five_prime_UTR 45.0%
AGCACAACATGGTGAGAGAT+TGG - chr7_1:31745150-31745169 Msa1016130:five_prime_UTR 45.0%
! CATACATGTGGTCTAGTTCG+AGG - chr7_1:31745274-31745293 Msa1016130:five_prime_UTR 45.0%
!!! ATGGATTAGTTTTGGCCACC+AGG + chr7_1:31745463-31745482 None:intergenic 45.0%
AGGAAACAAGATGGAGGTAG+TGG + chr7_1:31745629-31745648 None:intergenic 45.0%
CAAGTCTCATGGCAAGTTTC+TGG + chr7_1:31745690-31745709 None:intergenic 45.0%
TCGTGCTCAATTCTTGCTGA+TGG + chr7_1:31745750-31745769 None:intergenic 45.0%
ATCAGCAAGAATTGAGCACG+AGG - chr7_1:31745749-31745768 Msa1016130:five_prime_UTR 45.0%
GAGGCTAGTACGTCCAAAAT+TGG - chr7_1:31745768-31745787 Msa1016130:five_prime_UTR 45.0%
CAAGCTTCAAGCTCATGAGT+TGG + chr7_1:31745920-31745939 None:intergenic 45.0%
ACTCATGAGCTTGAAGCTTG+AGG - chr7_1:31745920-31745939 Msa1016130:five_prime_UTR 45.0%
CTCATGAGCTTGAAGCTTGA+GGG - chr7_1:31745921-31745940 Msa1016130:five_prime_UTR 45.0%
TCATGAGCTTGAAGCTTGAG+GGG - chr7_1:31745922-31745941 Msa1016130:five_prime_UTR 45.0%
GTTCTCAGAGGTAGTATGTC+TGG - chr7_1:31746019-31746038 Msa1016130:five_prime_UTR 45.0%
TTCATGGATTCTTTCCGGCA+TGG + chr7_1:31746113-31746132 None:intergenic 45.0%
GTTGAGAAGAGAAGCCATGG+AGG + chr7_1:31743165-31743184 None:intergenic 50.0%
!! AAGCTGGTTTGAGTGGGTTG+TGG + chr7_1:31743212-31743231 None:intergenic 50.0%
CGCGGTTACGGAGAATTTCA+CGG + chr7_1:31743385-31743404 None:intergenic 50.0%
AGGAAGACACTTGAGAAGGC+TGG - chr7_1:31743788-31743807 Msa1016130:intron 50.0%
GGATTAATGCGTTGGAGACG+GGG - chr7_1:31743999-31744018 Msa1016130:intron 50.0%
! TGAGAGGACGTTGATTGTGG+CGG - chr7_1:31744027-31744046 Msa1016130:intron 50.0%
!! CGTTGATTGTGGCGGATGAT+AGG - chr7_1:31744035-31744054 Msa1016130:intron 50.0%
!! TGTGGCGGATGATAGGAGTA+TGG - chr7_1:31744042-31744061 Msa1016130:intron 50.0%
TGGTATGCGGGTGATGAGAA+TGG - chr7_1:31744181-31744200 Msa1016130:intron 50.0%
GGTATGCGGGTGATGAGAAT+GGG - chr7_1:31744182-31744201 Msa1016130:intron 50.0%
GGTGATGAGAATGGGAAAGG+TGG - chr7_1:31744190-31744209 Msa1016130:intron 50.0%
ACGAAGAGAGGATTGTGTGC+TGG - chr7_1:31744229-31744248 Msa1016130:intron 50.0%
GTCGAAGATATCGTGGACTC+AGG - chr7_1:31744258-31744277 Msa1016130:intron 50.0%
GAAGATATCGTGGACTCAGG+TGG - chr7_1:31744261-31744280 Msa1016130:intron 50.0%
!!! GTATCCGAGCGTTGTTTTGG+AGG - chr7_1:31744309-31744328 Msa1016130:intron 50.0%
TCACCCTCCAAAACAACGCT+CGG + chr7_1:31744316-31744335 None:intergenic 50.0%
! TTGGAGGGTGATGAGAGTGT+TGG - chr7_1:31744325-31744344 Msa1016130:intron 50.0%
GTGCTTCTTCGGCATACATG+TGG - chr7_1:31745262-31745281 Msa1016130:five_prime_UTR 50.0%
TGATACCTCGGTAGCTTCAC+TGG - chr7_1:31745493-31745512 Msa1016130:five_prime_UTR 50.0%
GCAATGGCTGCTATGATCTC+TGG - chr7_1:31745840-31745859 Msa1016130:five_prime_UTR 50.0%
ACCTCGGAGCCAAATTCATC+GGG + chr7_1:31745894-31745913 None:intergenic 50.0%
CACCTCGGAGCCAAATTCAT+CGG + chr7_1:31745895-31745914 None:intergenic 50.0%
!! GCTCATGAGTTGGTTCACCT+CGG + chr7_1:31745910-31745929 None:intergenic 50.0%
TTGAAGCTTGAGGGGTCAGT+CGG - chr7_1:31745930-31745949 Msa1016130:five_prime_UTR 50.0%
!! GCAGGCCACCTTTTAAAAGC+CGG - chr7_1:31746233-31746252 Msa1016130:five_prime_UTR 50.0%
GCCGTTGAGAAGAGAAGCCA+TGG + chr7_1:31743168-31743187 None:intergenic 55.0%
TGGAGACGGGGCAATTTGAG+AGG - chr7_1:31744011-31744030 Msa1016130:intron 55.0%
! GGCGGATGATAGGAGTATGG+TGG - chr7_1:31744045-31744064 Msa1016130:intron 55.0%
GCGGGTGATGAGAATGGGAA+AGG - chr7_1:31744187-31744206 Msa1016130:intron 55.0%
AGACTGGGTCCGCGATTACT+TGG - chr7_1:31744284-31744303 Msa1016130:intron 55.0%
TGCAACCAGTGAAGCTACCG+AGG + chr7_1:31745501-31745520 None:intergenic 55.0%
! TCCCGATGAATTTGGCTCCG+AGG - chr7_1:31745890-31745909 Msa1016130:five_prime_UTR 55.0%
TCGTGGACTCAGGTGGAGAC+TGG - chr7_1:31744268-31744287 Msa1016130:intron 60.0%
CGTGGACTCAGGTGGAGACT+GGG - chr7_1:31744269-31744288 Msa1016130:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 31743097 31746332 31743097 ID=Msa1016130;Name=Msa1016130
chr7_1 mRNA 31743097 31746332 31743097 ID=Msa1016130-mRNA-1;Parent=Msa1016130;Name=Msa1016130-mRNA-1;_AED=0.00;_eAED=0.00;_QI=1449|1|1|1|1|1|2|376|88
chr7_1 exon 31743097 31743691 31743097 ID=Msa1016130-mRNA-1:exon:6321;Parent=Msa1016130-mRNA-1
chr7_1 exon 31744836 31746332 31744836 ID=Msa1016130-mRNA-1:exon:6320;Parent=Msa1016130-mRNA-1
chr7_1 five_prime_UTR 31744884 31746332 31744884 ID=Msa1016130-mRNA-1:five_prime_utr;Parent=Msa1016130-mRNA-1
chr7_1 CDS 31744836 31744883 31744836 ID=Msa1016130-mRNA-1:cds;Parent=Msa1016130-mRNA-1
chr7_1 CDS 31743473 31743691 31743473 ID=Msa1016130-mRNA-1:cds;Parent=Msa1016130-mRNA-1
chr7_1 three_prime_UTR 31743097 31743472 31743097 ID=Msa1016130-mRNA-1:three_prime_utr;Parent=Msa1016130-mRNA-1
Gene Sequence

>Msa1016130

ATGCTTATTGGTGATAGTGCTGCTGCGAATACATATCCTTACATCCAGGTGAAGAATCCATCAGCAAGAATTGAGCACGAGGCTAGTACGTCCAAAATTGGTGAAGATCAGTTATTTTACTTTCAACAAAGAGGAATAGACTATGAAAAAGCAATGGCTGCTATGATCTCTGGATTTTGCCGTGATGTCTTCAATGAGCTTCCCGATGAATTTGGCTCCGAGGTGAACCAACTCATGAGCTTGAAGCTTGAGGGGTCAGTCGGATAA

Protein sequence

>Msa1016130

MLIGDSAAANTYPYIQVKNPSARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGSEVNQLMSLKLEGSVG*