AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0615850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615850 MtrunA17_Chr4g0052411 99.568 694 3 0 1 694 1 694 0.0 1397
Msa0615850 MtrunA17_Chr2g0297281 85.612 695 94 5 1 694 61 750 0.0 1146
Msa0615850 MtrunA17_Chr7g0217421 85.440 364 53 0 219 582 29 392 0.0 648
Msa0615850 MtrunA17_Chr3g0143721 51.031 582 271 6 96 672 124 696 0.0 551
Msa0615850 MtrunA17_Chr1g0158881 50.000 450 203 4 230 677 330 759 1.01e-135 417
Msa0615850 MtrunA17_Chr7g0260601 44.275 524 257 12 182 688 196 701 6.41e-135 413
Msa0615850 MtrunA17_Chr4g0031821 47.788 452 218 8 229 674 320 759 2.72e-132 409
Msa0615850 MtrunA17_Chr6g0476861 46.352 466 228 8 216 672 184 636 2.91e-131 403
Msa0615850 MtrunA17_Chr8g0362771 47.109 467 221 7 215 674 224 671 4.36e-129 399
Msa0615850 MtrunA17_Chr7g0248361 44.556 496 241 11 188 672 159 631 2.17e-127 392
Msa0615850 MtrunA17_Chr3g0135721 46.903 452 220 6 227 674 222 657 4.62e-127 393
Msa0615850 MtrunA17_Chr3g0135761 46.930 456 220 7 223 674 218 655 1.63e-124 386
Msa0615850 MtrunA17_Chr5g0429571 49.453 457 214 9 211 651 290 745 8.12e-124 387
Msa0615850 MtrunA17_Chr3g0104211 46.243 519 234 15 153 646 233 731 1.60e-121 381
Msa0615850 MtrunA17_Chr3g0094871 44.420 448 223 8 229 672 11 436 7.91e-121 368
Msa0615850 MtrunA17_Chr5g0432631 45.435 460 228 8 222 674 220 663 1.12e-120 380
Msa0615850 MtrunA17_Chr5g0432641 41.810 464 243 8 219 673 179 624 1.47e-110 348
Msa0615850 MtrunA17_Chr8g0388371 36.120 598 309 17 146 692 311 886 2.37e-99 325
Msa0615850 MtrunA17_Chr2g0331161 40.564 461 240 8 223 673 409 845 4.01e-92 305
Msa0615850 MtrunA17_Chr1g0168321 41.076 409 184 9 189 590 132 490 1.67e-91 294
Msa0615850 MtrunA17_Chr6g0456351 46.491 342 163 5 151 489 253 577 4.63e-86 282
Msa0615850 MtrunA17_Chr3g0129971 39.446 469 251 8 214 667 280 730 1.07e-80 273
Msa0615850 MtrunA17_Chr8g0357301 34.310 478 269 11 246 686 487 956 4.03e-74 258
Msa0615850 MtrunA17_Chr5g0432391 33.857 446 217 10 227 665 50 424 3.20e-64 219
Msa0615850 MtrunA17_Chr3g0135781 58.659 179 64 3 215 390 42 213 4.14e-63 209
Msa0615850 MtrunA17_Chr8g0345461 39.405 269 162 1 210 477 146 414 1.31e-61 212
Msa0615850 MtrunA17_Chr4g0050561 42.276 246 140 2 230 473 157 402 8.65e-61 209
Msa0615850 MtrunA17_Chr1g0192151 38.235 272 167 1 210 480 148 419 1.66e-60 209
Msa0615850 MtrunA17_Chr4g0014731 38.235 272 167 1 210 480 149 420 2.03e-60 209
Msa0615850 MtrunA17_Chr1g0200081 39.405 269 161 2 210 477 156 423 1.12e-59 207
Msa0615850 MtrunA17_Chr1g0182711 40.816 245 144 1 230 473 189 433 1.44e-56 199
Msa0615850 MtrunA17_Chr7g0262801 40.816 245 144 1 230 473 188 432 3.81e-56 197
Msa0615850 MtrunA17_Chr2g0327121 47.577 227 115 3 229 454 207 430 1.11e-54 201
Msa0615850 MtrunA17_Chr2g0327121 39.623 265 147 4 225 478 478 740 2.34e-53 197
Msa0615850 MtrunA17_Chr7g0264521 42.424 231 130 2 225 454 477 705 6.10e-54 198
Msa0615850 MtrunA17_Chr7g0264521 46.256 227 118 3 229 454 206 429 3.82e-53 196
Msa0615850 MtrunA17_Chr1g0180791 46.696 227 117 3 229 454 205 428 1.38e-53 197
Msa0615850 MtrunA17_Chr1g0180791 42.424 231 130 2 225 454 476 704 9.85e-53 195
Msa0615850 MtrunA17_Chr7g0255651 44.934 227 124 1 229 454 282 508 4.15e-53 192
Msa0615850 MtrunA17_Chr7g0255651 33.333 222 134 5 253 467 38 252 4.89e-23 103
Msa0615850 MtrunA17_Chr3g0145011 40.693 231 136 1 228 457 138 368 1.40e-52 187
Msa0615850 MtrunA17_Chr3g0141901 40.870 230 135 1 229 457 136 365 1.93e-52 186
Msa0615850 MtrunA17_Chr3g0108321 48.333 180 92 1 229 407 159 338 2.34e-50 179
Msa0615850 MtrunA17_Chr2g0277831 45.957 235 119 5 221 452 527 756 2.41e-50 188
Msa0615850 MtrunA17_Chr2g0277831 45.148 237 117 3 226 455 240 470 8.22e-46 175
Msa0615850 MtrunA17_Chr7g0255721 42.222 225 128 2 229 452 685 908 5.50e-48 182
Msa0615850 MtrunA17_Chr7g0255721 43.434 198 104 3 261 455 417 609 1.38e-34 141
Msa0615850 MtrunA17_Chr7g0255691 44.934 227 124 1 229 454 286 512 6.90e-48 177
Msa0615850 MtrunA17_Chr7g0255691 35.458 251 135 8 232 468 20 257 2.17e-27 117
Msa0615850 MtrunA17_Chr7g0255901 39.608 255 144 7 225 473 637 887 1.57e-45 174
Msa0615850 MtrunA17_Chr7g0255641 39.556 225 134 2 229 452 658 881 1.96e-45 174
Msa0615850 MtrunA17_Chr7g0255641 40.933 193 104 5 267 456 432 617 3.11e-31 130
Msa0615850 MtrunA17_Chr4g0043381 41.704 223 126 2 231 452 839 1058 3.15e-45 174
Msa0615850 MtrunA17_Chr3g0135791 35.793 271 158 4 422 690 8 264 1.28e-42 156
Msa0615850 MtrunA17_Chr1g0190401 28.657 499 283 12 229 664 677 1165 9.10e-42 164
Msa0615850 MtrunA17_Chr7g0217411 61.682 107 41 0 572 678 6 112 1.47e-41 147
Msa0615850 MtrunA17_Chr3g0086401 39.841 251 128 7 231 467 94 335 2.32e-41 160
Msa0615850 MtrunA17_Chr3g0086401 38.095 252 126 6 225 452 381 626 3.57e-40 157
Msa0615850 MtrunA17_Chr2g0321241 37.500 288 164 9 212 491 117 396 3.20e-41 156
Msa0615850 MtrunA17_Chr2g0327231 42.778 180 102 1 210 388 327 506 1.12e-40 156
Msa0615850 MtrunA17_Chr2g0327231 41.758 91 50 1 229 319 153 240 2.72e-14 76.3
Msa0615850 MtrunA17_Chr3g0086411 37.652 247 132 4 225 452 211 454 2.86e-40 154
Msa0615850 MtrunA17_Chr3g0086411 44.079 152 67 4 316 455 7 152 1.48e-23 105
Msa0615850 MtrunA17_Chr4g0026631 40.426 235 128 8 212 442 112 338 1.65e-39 151
Msa0615850 MtrunA17_Chr8g0387641 39.286 224 129 5 229 449 521 740 1.46e-38 153
Msa0615850 MtrunA17_Chr4g0004121 37.154 253 143 6 223 465 236 482 6.88e-38 148
Msa0615850 MtrunA17_Chr6g0462581 41.333 225 124 6 228 449 499 718 2.23e-37 149
Msa0615850 MtrunA17_Chr4g0033451 38.589 241 130 5 226 455 377 610 5.41e-37 149
Msa0615850 MtrunA17_Chr4g0038101 38.865 229 126 6 228 449 720 941 6.71e-37 148
Msa0615850 MtrunA17_Chr1g0195741 40.529 227 125 6 228 449 937 1158 2.13e-36 147
Msa0615850 MtrunA17_Chr3g0116131 40.343 233 128 7 223 449 895 1122 2.82e-36 147
Msa0615850 MtrunA17_Chr6g0459561 38.462 234 131 8 223 450 376 602 3.23e-36 145
Msa0615850 MtrunA17_Chr5g0397121 38.667 225 131 5 228 449 512 732 7.83e-36 144
Msa0615850 MtrunA17_Chr1g0202371 38.696 230 123 7 228 449 396 615 1.93e-35 143
Msa0615850 MtrunA17_Chr1g0202381 39.556 225 127 6 229 449 468 687 3.85e-35 142
Msa0615850 MtrunA17_Chr1g0195731 38.428 229 131 6 226 449 931 1154 6.68e-35 142
Msa0615850 MtrunA17_Chr3g0127431 37.339 233 131 6 229 454 84 308 2.01e-34 135
Msa0615850 MtrunA17_Chr4g0047411 38.605 215 118 4 254 455 202 415 3.34e-34 139
Msa0615850 MtrunA17_Chr1g0204031 38.596 228 131 6 229 452 557 779 4.97e-34 139
Msa0615850 MtrunA17_Chr4g0052271 37.190 242 136 8 225 460 117 348 3.80e-33 132
Msa0615850 MtrunA17_Chr3g0127401 32.881 295 168 9 226 506 78 356 2.44e-32 129
Msa0615850 MtrunA17_Chr6g0459541 34.884 258 132 9 223 450 36 287 2.57e-32 128
Msa0615850 MtrunA17_Chr2g0316851 35.714 238 131 6 231 455 596 824 5.30e-32 134
Msa0615850 MtrunA17_Chr7g0246111 36.797 231 136 6 228 454 211 435 1.41e-31 129
Msa0615850 MtrunA17_Chr7g0217431 50.435 115 56 1 94 208 75 188 2.41e-27 109
Msa0615850 MtrunA17_Chr6g0459551 38.860 193 105 7 223 412 96 278 5.73e-26 111
Msa0615850 MtrunA17_Chr2g0289231 33.333 237 132 9 226 448 294 518 6.19e-24 106
Msa0615850 MtrunA17_Chr3g0135741 37.121 132 82 1 422 552 6 137 2.24e-18 82.4
Msa0615850 MtrunA17_Chr6g0459531 29.661 236 122 10 223 450 61 260 1.22e-16 81.6
Msa0615850 MtrunA17_Chr5g0432671 39.048 105 59 2 428 531 2 102 2.76e-15 72.4
Msa0615850 MtrunA17_Chr8g0372701 33.146 178 103 6 229 399 222 390 5.42e-14 75.1
Msa0615850 MtrunA17_Chr4g0062081 42.169 83 46 2 227 307 5 87 2.56e-13 66.6
Msa0615850 MtrunA17_Chr3g0134831 27.723 202 116 6 219 399 30 222 1.19e-12 69.3
Msa0615850 MtrunA17_Chr8g0392971 35.052 97 61 2 438 532 51 147 2.81e-12 65.1
Msa0615850 MtrunA17_Chr2g0315971 29.282 181 112 6 226 399 192 363 6.61e-12 68.9
Msa0615850 MtrunA17_Chr2g0315971 28.729 181 114 6 226 399 468 640 4.43e-11 66.2
Msa0615850 MtrunA17_Chr2g0316041 26.702 191 119 6 221 399 129 310 7.55e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615850 AT2G30950.1 85.797 690 80 9 1 684 1 678 0.0 1154
Msa0615850 AT2G30950.2 85.797 690 80 9 1 684 1 678 0.0 1154
Msa0615850 AT2G30950.3 85.797 690 80 9 1 684 1 678 0.0 1154
Msa0615850 AT2G30950.4 85.797 690 80 9 1 684 5 682 0.0 1153
Msa0615850 AT1G06430.1 84.035 689 87 7 1 684 1 671 0.0 1122
Msa0615850 AT1G06430.3 84.035 689 87 7 1 684 1 671 0.0 1122
Msa0615850 AT1G06430.2 84.035 689 87 7 1 684 1 671 0.0 1122
Msa0615850 AT5G15250.1 65.991 691 203 8 1 680 3 672 0.0 899
Msa0615850 AT5G15250.2 60.413 533 156 9 1 499 3 514 0.0 594
Msa0615850 AT5G42270.1 52.048 586 259 9 96 672 122 694 0.0 555
Msa0615850 AT1G50250.1 53.072 586 255 10 96 672 132 706 0.0 548
Msa0615850 AT5G53170.1 49.780 454 205 6 222 672 351 784 2.48e-134 415
Msa0615850 AT2G26140.1 45.331 514 250 7 189 694 187 677 3.16e-131 404
Msa0615850 AT1G07510.1 47.345 452 220 9 229 674 324 763 9.63e-131 406
Msa0615850 AT2G29080.1 47.672 451 221 8 229 674 319 759 1.25e-124 390
Msa0615850 AT3G47060.1 47.639 466 218 11 210 651 290 753 1.32e-121 382
Msa0615850 AT5G58870.1 47.899 476 224 11 229 692 326 789 4.96e-120 378
Msa0615850 AT4G23940.1 38.327 514 266 10 212 690 410 907 1.82e-99 327
Msa0615850 AT3G02450.1 49.695 328 146 4 151 476 267 577 1.33e-91 298
Msa0615850 AT3G16290.1 39.463 484 249 9 212 675 380 839 1.45e-90 301
Msa0615850 AT5G64580.1 37.630 481 267 8 214 679 297 759 1.24e-79 271
Msa0615850 AT1G79560.1 33.750 480 269 13 246 686 507 976 7.25e-68 241
Msa0615850 AT1G79560.2 33.750 480 269 13 246 686 507 976 8.68e-68 240
Msa0615850 AT1G79560.3 34.423 459 252 13 246 665 507 955 2.01e-66 236
Msa0615850 AT1G53750.1 39.405 269 162 1 210 477 146 414 1.83e-61 212
Msa0615850 AT3G05530.1 38.603 272 166 1 210 480 149 420 5.49e-61 211
Msa0615850 AT5G19990.2 42.276 246 140 2 230 473 101 346 1.13e-60 207
Msa0615850 AT5G19990.1 42.276 246 140 2 230 473 159 404 2.30e-60 209
Msa0615850 AT5G19990.3 42.276 246 140 2 230 473 159 404 2.30e-60 209
Msa0615850 AT5G20000.1 42.276 246 140 2 230 473 159 404 2.66e-60 208
Msa0615850 AT1G09100.1 37.868 272 168 1 210 480 148 419 6.94e-59 205
Msa0615850 AT5G58290.1 42.678 239 136 1 229 466 152 390 4.96e-58 202
Msa0615850 AT1G53780.3 38.662 269 164 1 210 477 317 585 1.03e-57 206
Msa0615850 AT1G53780.1 38.662 269 164 1 210 477 318 586 1.09e-57 206
Msa0615850 AT1G53780.4 38.662 269 164 1 210 477 318 586 1.09e-57 206
Msa0615850 AT1G53780.2 38.662 269 164 1 210 477 339 607 1.36e-57 206
Msa0615850 AT4G29040.1 40.000 245 146 1 230 473 186 430 2.84e-55 196
Msa0615850 AT2G20140.1 42.060 233 134 1 230 461 186 418 1.01e-54 194
Msa0615850 AT3G09840.1 45.679 243 126 4 229 470 204 441 8.02e-54 199
Msa0615850 AT3G09840.1 42.672 232 129 3 225 454 475 704 3.10e-49 185
Msa0615850 AT5G03340.1 45.679 243 126 4 229 470 204 441 8.17e-54 199
Msa0615850 AT5G03340.1 42.424 231 130 2 225 454 475 703 3.95e-53 196
Msa0615850 AT3G53230.1 42.424 231 130 2 225 454 476 704 1.05e-53 198
Msa0615850 AT3G53230.1 44.934 227 121 2 229 454 205 428 2.06e-52 194
Msa0615850 AT1G45000.1 41.739 230 133 1 229 457 136 365 1.18e-53 190
Msa0615850 AT5G43010.1 41.304 230 134 1 229 457 136 365 2.21e-53 189
Msa0615850 AT3G56690.1 44.000 225 124 2 229 452 721 944 1.70e-50 190
Msa0615850 AT3G56690.1 35.443 237 149 2 220 455 373 606 1.80e-38 154
Msa0615850 AT5G08470.1 39.623 265 149 3 231 487 843 1104 3.81e-46 177
Msa0615850 AT5G08470.3 38.971 272 155 3 231 494 834 1102 4.65e-46 177
Msa0615850 AT1G03000.1 38.462 273 156 7 225 489 653 921 3.10e-45 174
Msa0615850 AT3G01610.2 41.833 251 120 6 221 456 222 461 6.48e-44 170
Msa0615850 AT3G01610.2 41.975 243 133 5 212 452 510 746 2.37e-39 156
Msa0615850 AT3G01610.1 41.833 251 120 6 221 456 222 461 7.29e-44 169
Msa0615850 AT3G01610.1 41.975 243 133 5 212 452 510 746 2.60e-39 155
Msa0615850 AT2G03670.1 42.544 228 129 2 229 454 283 510 9.25e-44 167
Msa0615850 AT2G03670.1 33.465 254 151 5 233 475 23 269 5.25e-31 129
Msa0615850 AT1G05910.1 36.559 279 159 5 226 493 375 646 1.02e-40 160
Msa0615850 AT1G64110.2 38.934 244 139 6 228 468 517 753 9.72e-39 154
Msa0615850 AT1G64110.4 38.934 244 139 6 228 468 517 753 9.72e-39 154
Msa0615850 AT1G64110.5 38.934 244 139 6 228 468 515 751 9.92e-39 154
Msa0615850 AT1G64110.3 38.934 244 139 6 228 468 515 751 9.92e-39 154
Msa0615850 AT1G64110.1 38.934 244 139 6 228 468 512 748 1.14e-38 154
Msa0615850 AT3G04340.1 26.562 512 303 11 226 674 778 1279 3.12e-38 153
Msa0615850 AT4G28000.1 40.000 225 127 6 228 449 514 733 6.11e-38 151
Msa0615850 AT4G28000.2 40.000 225 127 6 228 449 516 735 6.61e-38 151
Msa0615850 AT4G28000.3 40.000 225 127 6 228 449 516 735 7.10e-38 151
Msa0615850 AT1G80350.1 38.431 255 137 8 223 465 230 476 1.53e-37 147
Msa0615850 AT2G27600.1 39.149 235 131 8 212 442 114 340 4.39e-37 144
Msa0615850 AT1G50140.3 39.301 229 125 6 228 449 710 931 1.04e-36 148
Msa0615850 AT1G50140.1 39.301 229 125 6 228 449 710 931 1.04e-36 148
Msa0615850 AT1G50140.4 39.301 229 125 6 228 449 710 931 1.04e-36 148
Msa0615850 AT1G50140.2 39.301 229 125 6 228 449 688 909 1.15e-36 148
Msa0615850 AT1G50140.5 39.301 229 125 6 228 449 688 909 1.15e-36 148
Msa0615850 AT4G02480.1 39.738 229 128 6 226 449 957 1180 5.65e-36 146
Msa0615850 AT5G52882.1 39.556 225 128 6 228 449 513 732 7.64e-36 145
Msa0615850 AT2G34560.1 38.136 236 133 7 226 455 97 325 1.33e-35 139
Msa0615850 AT2G34560.2 38.136 236 133 7 226 455 106 334 2.32e-35 138
Msa0615850 AT3G19740.1 37.109 256 137 7 211 449 673 921 2.67e-35 144
Msa0615850 AT1G02890.1 39.316 234 132 6 226 454 938 1166 5.84e-35 143
Msa0615850 AT4G04910.1 38.140 215 119 4 254 455 239 452 6.49e-34 139
Msa0615850 AT3G27120.1 37.712 236 130 8 223 450 394 620 7.79e-34 138
Msa0615850 AT3G15120.1 36.555 238 129 6 231 455 718 946 1.52e-33 139
Msa0615850 AT3G15120.2 36.555 238 129 6 231 455 728 956 1.61e-33 139
Msa0615850 AT2G45500.4 36.364 231 137 6 228 454 79 303 1.92e-33 132
Msa0615850 AT2G45500.3 36.364 231 137 6 228 454 79 303 1.92e-33 132
Msa0615850 AT4G27680.1 32.601 273 165 8 226 485 78 344 3.22e-33 132
Msa0615850 AT2G45500.2 36.364 231 137 6 228 454 212 436 9.57e-33 132
Msa0615850 AT2G45500.1 36.364 231 137 6 228 454 216 440 1.03e-32 132
Msa0615850 AT2G45500.5 36.364 231 137 6 228 454 222 446 1.07e-32 132
Msa0615850 AT2G03670.2 33.465 254 151 5 233 475 23 269 9.07e-32 129
Msa0615850 AT2G03670.2 41.429 140 80 2 229 366 283 422 4.17e-21 97.1
Msa0615850 AT4G24860.1 38.053 226 130 6 229 449 817 1037 2.07e-31 132
Msa0615850 AT5G53540.1 35.470 234 140 6 226 454 81 308 2.08e-31 127
Msa0615850 AT4G24860.3 38.053 226 130 6 229 449 815 1035 2.33e-31 132
Msa0615850 AT4G24860.4 38.053 226 130 6 229 449 790 1010 2.88e-31 131
Msa0615850 AT4G24860.2 38.053 226 130 6 229 449 813 1033 3.01e-31 131
Msa0615850 AT1G45000.2 41.007 139 81 1 229 366 136 274 7.91e-29 118
Msa0615850 AT1G62130.1 35.270 241 132 7 228 464 749 969 2.48e-28 122
Msa0615850 AT1G62130.2 35.270 241 132 7 228 464 742 962 2.56e-28 122
Msa0615850 AT4G04180.1 32.609 230 137 7 229 448 316 537 1.66e-25 112
Msa0615850 AT4G04180.2 32.609 230 137 7 229 448 311 532 1.94e-25 112
Msa0615850 AT5G08470.2 41.216 148 83 2 231 377 843 987 2.39e-25 112
Msa0615850 AT1G02890.2 35.193 233 115 7 226 454 938 1138 5.23e-24 108
Msa0615850 AT5G17760.1 30.168 179 108 5 230 399 217 387 3.55e-13 73.2
Msa0615850 AT2G18193.1 31.818 176 106 5 230 399 207 374 2.06e-12 70.5
Msa0615850 AT5G17740.1 28.333 180 109 5 230 397 209 380 1.66e-11 67.8

Find 207 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGGTTTGCCGGCATTAT+TGG 0.190374 4_2:+65403119 Msa0615850:CDS
TTCGAGGTTTCTTGAGTATT+TGG 0.193224 4_2:+65403197 Msa0615850:CDS
CTTGGCCAACAAAGTCTTTC+CGG 0.230399 4_2:-65403724 None:intergenic
TATTGGTCCTTGGTCACTTA+TGG 0.235513 4_2:+65405315 Msa0615850:CDS
GTTGAGATGTTTGTTGGTAT+TGG 0.265499 4_2:+65403801 Msa0615850:CDS
AACAAAGTCTTTCCGGTTCC+TGG 0.267110 4_2:-65403717 None:intergenic
GCAAGAATTGTTGGAGGATT+AGG 0.268443 4_2:+65404770 Msa0615850:CDS
CTGAAATTCCAGTTGAAAAT+CGG 0.283840 4_2:+65405572 Msa0615850:CDS
TGCAACCTATTTCCCAATTC+AGG 0.285706 4_2:-65403288 None:intergenic
AGCATGAACCTTTAGGATTT+CGG 0.289530 4_2:-65404196 None:intergenic
ACATTTGGAATGTCTGATAT+TGG 0.298060 4_2:+65405298 Msa0615850:CDS
TGAGGCTGTGTCTCCTGAAT+TGG 0.304859 4_2:+65403275 Msa0615850:CDS
AAGAGCTTCTTCAGAAATTC+AGG 0.309999 4_2:+65403343 Msa0615850:CDS
TAAGATTGTGGAAGTCCTTC+TGG 0.311011 4_2:+65405498 Msa0615850:CDS
GCTTTCCCTGCTGCTGTCAT+TGG 0.314297 4_2:+65403444 Msa0615850:CDS
TGTCTCCTGAATTGGGAAAT+AGG 0.315118 4_2:+65403283 Msa0615850:CDS
CAACTCTTTGCAAGAATTGT+TGG 0.316556 4_2:+65404761 Msa0615850:CDS
CTTTATCCACAAACAGTAAT+AGG 0.317490 4_2:+65402932 Msa0615850:CDS
CGTGTTCGAGTTCAACTTCC+TGG 0.320835 4_2:+65403312 Msa0615850:CDS
GTTGGTTTGCCGGCATTATT+GGG 0.322430 4_2:+65403120 Msa0615850:CDS
TATTGTTAGCATGAACCTTT+AGG 0.322618 4_2:-65404203 None:intergenic
TTGTTGTTGCTGCAACTAAC+AGG 0.324289 4_2:+65404012 Msa0615850:CDS
ATAGAATCGTCAATCTCTTT+AGG 0.345992 4_2:-65404357 None:intergenic
CTCGAGGCGGTCCGGTGGAA+TGG 0.358005 4_2:+65403482 Msa0615850:CDS
TTGTTGGCCAAGGCTATTGC+TGG 0.358387 4_2:+65403735 Msa0615850:CDS
AAATGTCGGTGTTGGTTTGC+CGG 0.361800 4_2:+65403110 Msa0615850:CDS
TTGCAGATGGTAGTCACATT+TGG 0.362813 4_2:+65405283 Msa0615850:intron
CCAAAAGGAGTTCTTCTTGT+TGG 0.368691 4_2:+65403690 Msa0615850:CDS
TCGAGGCGGTCCGGTGGAAT+GGG 0.369632 4_2:+65403483 Msa0615850:CDS
TACATACAGGCCATTCAAAC+AGG 0.371825 4_2:-65405622 None:intergenic
CCAACAAGAAGAACTCCTTT+TGG 0.377297 4_2:-65403690 None:intergenic
TCGGTCCTTCCCCTTACATC+TGG 0.380555 4_2:-65404177 None:intergenic
AGTAGTCCTATTACTGTTTG+TGG 0.381914 4_2:-65402938 None:intergenic
AGATTGACGATTCTATTGAT+AGG 0.384128 4_2:+65404364 Msa0615850:CDS
GTTCTTCTTGTTGGTCCTCC+AGG 0.385102 4_2:+65403699 Msa0615850:CDS
TCTATTGATAGGATTGTTGC+TGG 0.387609 4_2:+65404375 Msa0615850:CDS
CGGTTGATGTTCCAGATGTA+AGG 0.391954 4_2:+65404166 Msa0615850:CDS
AAACCTCGAATACGACATTC+TGG 0.396169 4_2:-65403184 None:intergenic
AGACAAAGAGGGACAGGAAT+TGG 0.397460 4_2:+65403909 Msa0615850:CDS
CTTGTTGGTCCTCCAGGAAC+CGG 0.397932 4_2:+65403705 Msa0615850:CDS
TCAAAAGTCACTCCAGTGTT+TGG 0.403653 4_2:-65403570 None:intergenic
TCATAATGCTCAAGAAGATT+CGG 0.406140 4_2:+65403389 Msa0615850:CDS
TTGCCGGCATTATTGGGAAA+TGG 0.408701 4_2:+65403126 Msa0615850:CDS
GAGTTTGTTGAGATGTTTGT+TGG 0.409307 4_2:+65403795 Msa0615850:CDS
TGAAATTCCAGTTGAAAATC+GGG 0.410824 4_2:+65405573 Msa0615850:CDS
CAAGTGGATTTATGAAGGAT+TGG 0.414714 4_2:-65402472 None:intergenic
ATTCAAACAGGGACTGCTAC+TGG 0.418905 4_2:-65405610 None:intergenic
GTTTGGTTCCATTTGAAACT+TGG 0.424898 4_2:-65403553 None:intergenic
GTTTCTTGAGTATTTGGATA+AGG 0.428076 4_2:+65403203 Msa0615850:CDS
ATGGGAGGTCCCGGTGGACC+TGG 0.430906 4_2:+65403501 Msa0615850:CDS
GCTAATTTCTTACCCACAAA+TGG 0.431722 4_2:-65404466 None:intergenic
TTCTGTCAAAAGTTGGTTGA+GGG 0.432083 4_2:-65403958 None:intergenic
CGTCCATTTCTGTCAAAAGT+TGG 0.434164 4_2:-65403965 None:intergenic
AATTACCTGTCTTGCTATAC+CGG 0.437039 4_2:-65404870 None:intergenic
CCTGGATTTCCTATGCAATT+CGG 0.441651 4_2:+65403519 Msa0615850:CDS
TTCCTTCTCTCGAGGCGGTC+CGG 0.442619 4_2:+65403474 Msa0615850:CDS
ATTCTCATATAGATCAACTT+TGG 0.444406 4_2:-65403235 None:intergenic
GCATCATCAGCATGTCTTGT+TGG 0.450457 4_2:+65402904 Msa0615850:CDS
TCCGGTGGAATGGGAGGTCC+CGG 0.451748 4_2:+65403492 Msa0615850:CDS
GACAGAAATGGACGGATTTG+AGG 0.452499 4_2:+65403974 Msa0615850:CDS
CATAATGCTCAAGAAGATTC+GGG 0.453447 4_2:+65403390 Msa0615850:CDS
AAGTGATGATGAAGAAGAGT+TGG 0.454350 4_2:-65402504 None:intergenic
GAGGCTGTGTCTCCTGAATT+GGG 0.454840 4_2:+65403276 Msa0615850:CDS
AAATGTGAGAGAAGAATGTA+TGG 0.456699 4_2:-65402559 None:intergenic
GGGATTCTAAAATTGTTGCT+TGG 0.459150 4_2:+65403087 Msa0615850:CDS
AAGTGGATTTATGAAGGATT+GGG 0.460665 4_2:-65402471 None:intergenic
ATCTAAAGCCAAGTTTCAAA+TGG 0.460715 4_2:+65403545 Msa0615850:CDS
ACTCTTAGTAAGGATTTGAA+TGG 0.462643 4_2:+65402958 Msa0615850:CDS
AGCAACAAGTGGATTTATGA+AGG 0.464258 4_2:-65402477 None:intergenic
AAGGCTATTGCTGGTGAAGC+GGG 0.464510 4_2:+65403744 Msa0615850:CDS
AGTAGCAGTCCCTGTTTGAA+TGG 0.465711 4_2:+65405612 Msa0615850:exon
TTCATACCTGTCTATCGAAT+CGG 0.467588 4_2:-65404070 None:intergenic
TTGTTGGAGGATTAGGTGGT+AGG 0.468049 4_2:+65404777 Msa0615850:CDS
GCTGGTCGGCGAGGAAGGAC+AGG 0.470330 4_2:+65404327 Msa0615850:CDS
GGGACTGCTACTGGAGTTGA+AGG 0.470521 4_2:-65405601 None:intergenic
CCTCCAGAATGTCGTATTCG+AGG 0.470895 4_2:+65403181 Msa0615850:CDS
CTCTTTGCAAGAATTGTTGG+AGG 0.472097 4_2:+65404764 Msa0615850:CDS
CCTGAGAGGTTCACTTCTGT+TGG 0.472869 4_2:+65403657 Msa0615850:CDS
GGTGAGCCTGAGGTTACAAC+TGG 0.473700 4_2:+65404821 Msa0615850:CDS
AATGAAGCTGCTATATTAGC+TGG 0.476361 4_2:+65404309 Msa0615850:CDS
GGTTGCAGAACTTTGACTCC+TGG 0.477393 4_2:+65404638 Msa0615850:intron
ACAGAAATGGACGGATTTGA+GGG 0.478098 4_2:+65403975 Msa0615850:CDS
CGCTTCACCAGCAATAGCCT+TGG 0.481050 4_2:-65403742 None:intergenic
TGATAGGATTGTTGCTGGAA+TGG 0.483816 4_2:+65404380 Msa0615850:CDS
GAATGTCTGATATTGGTCCT+TGG 0.484443 4_2:+65405305 Msa0615850:CDS
TGGTCATGATGCGGTACAAA+AGG 0.488639 4_2:+65404658 Msa0615850:CDS
AAAATCAGCAGGAAGGAAGA+AGG 0.491252 4_2:+65403064 Msa0615850:CDS
AGGAACCGGAAAGACTTTGT+TGG 0.495055 4_2:+65403719 Msa0615850:CDS
GCATAATGAAGAGGGTAACT+TGG 0.497705 4_2:-65405678 None:intergenic
CCAACAGAAGTGAACCTCTC+AGG 0.499924 4_2:-65403657 None:intergenic
TGAATTTCTGAAGAAGCTCT+TGG 0.500518 4_2:-65403341 None:intergenic
AATACACCAATGACAGCAGC+AGG 0.500849 4_2:-65403450 None:intergenic
AGTTCCTCGAGGTCAAGCTC+GGG 0.500879 4_2:+65404688 Msa0615850:CDS
TGGGAAGAGCAAAAGTTTAG+TGG 0.504719 4_2:+65404422 Msa0615850:CDS
CACCTCCATAAAATCCTGCT+TGG 0.506645 4_2:-65403616 None:intergenic
TAATAGGACTACTCTTAGTA+AGG 0.510303 4_2:+65402948 Msa0615850:CDS
AAAGTTGATCTATATGAGAA+TGG 0.514012 4_2:+65403237 Msa0615850:CDS
TGTTGGAGGATTAGGTGGTA+GGG 0.515767 4_2:+65404778 Msa0615850:CDS
GTTGGTGCTCGCATTCCAAA+AGG 0.518433 4_2:+65403675 Msa0615850:CDS
TTTCCATTTCCCAATAATGC+CGG 0.518756 4_2:-65403129 None:intergenic
TAGTTCCTCGAGGTCAAGCT+CGG 0.519211 4_2:+65404687 Msa0615850:CDS
ACCAGGCCGATTCGATAGAC+AGG 0.519780 4_2:+65404064 Msa0615850:CDS
GTTGATGAAATTGACGCTGT+TGG 0.520478 4_2:+65403885 Msa0615850:CDS
GTCAAGCTCGGGGTCTTACA+TGG 0.521459 4_2:+65404699 Msa0615850:CDS
GACTCTGCGTTATTGAGACC+AGG 0.523124 4_2:+65404047 Msa0615850:CDS
ATCCTTGGAACAAAATCAGC+AGG 0.523200 4_2:+65403053 Msa0615850:CDS
CGGAAAGACTTTGTTGGCCA+AGG 0.524052 4_2:+65403725 Msa0615850:CDS
TATTAGCTGGTCGGCGAGGA+AGG 0.526217 4_2:+65404322 Msa0615850:CDS
CCGAATTGCATAGGAAATCC+AGG 0.528602 4_2:-65403519 None:intergenic
TGGGGTGGATGAAGCCAAGC+AGG 0.530470 4_2:+65403602 Msa0615850:CDS
AAATCAGCAGGAAGGAAGAA+GGG 0.532430 4_2:+65403065 Msa0615850:CDS
TTGCTTGGAAATGTCGGTGT+TGG 0.533808 4_2:+65403102 Msa0615850:CDS
AGAGCTTCTTCAGAAATTCA+GGG 0.534293 4_2:+65403344 Msa0615850:CDS
CACCGGACCGCCTCGAGAGA+AGG 0.534803 4_2:-65403476 None:intergenic
AGATGTATTGAAACAAACTC+TGG 0.535399 4_2:-65405806 None:intergenic
GCTTATGCTGCTGATGAACA+AGG 0.536032 4_2:+65403153 Msa0615850:CDS
TAGCTTTCTTGAACAAATCA+CGG 0.536877 4_2:-65403836 None:intergenic
AGAGGGACAGGAATTGGTGG+AGG 0.538307 4_2:+65403915 Msa0615850:CDS
TTAGTGGCATATCATGAAGT+TGG 0.538933 4_2:+65404438 Msa0615850:CDS
CATAGGAAATCCAGGTCCAC+CGG 0.540380 4_2:-65403511 None:intergenic
GTTGGAAGACAAAGAGGGAC+AGG 0.541174 4_2:+65403903 Msa0615850:CDS
GAAGGAACATTAATGACCGA+TGG 0.543574 4_2:+65404402 Msa0615850:CDS
TTTCTGTCAAAAGTTGGTTG+AGG 0.544666 4_2:-65403959 None:intergenic
GAAGGATTGGGTGTGGCTAG+AGG 0.545144 4_2:-65402459 None:intergenic
ACCTGTCTATCGAATCGGCC+TGG 0.545246 4_2:-65404065 None:intergenic
GACGGATTTGAGGGTAATAC+CGG 0.545337 4_2:+65403984 Msa0615850:CDS
AGGCGGTCCGGTGGAATGGG+AGG 0.546632 4_2:+65403486 Msa0615850:CDS
GGTTGATGTTCCAGATGTAA+GGG 0.547060 4_2:+65404167 Msa0615850:CDS
AGATCAGCTCCGCTGAAACC+AGG 0.547210 4_2:-65404273 None:intergenic
TTAGATTGACCGAATTGCAT+AGG 0.547275 4_2:-65403528 None:intergenic
TGTGGAAGTCCTTCTGGAGA+AGG 0.550581 4_2:+65405504 Msa0615850:CDS
AATCACCGGTATAGCAAGAC+AGG 0.551889 4_2:+65404865 Msa0615850:CDS
GAAGTTGGTCATGCCATTTG+TGG 0.552290 4_2:+65404453 Msa0615850:CDS
CAAAGAGGGACAGGAATTGG+TGG 0.553090 4_2:+65403912 Msa0615850:CDS
GAGTTGGAGTTAGCAACAAG+TGG 0.556628 4_2:-65402488 None:intergenic
ACCGGGACCTCCCATTCCAC+CGG 0.558678 4_2:-65403493 None:intergenic
CTTCTCTCGAGGCGGTCCGG+TGG 0.561799 4_2:+65403477 Msa0615850:CDS
TTTCAAATGGAACCAAACAC+TGG 0.563173 4_2:+65403558 Msa0615850:CDS
TGAGATCAGAGTTGGGTCAT+CGG 0.563203 4_2:-65404732 None:intergenic
CAAGGCTATTGCTGGTGAAG+CGG 0.563818 4_2:+65403743 Msa0615850:CDS
AAGTTGGTCATGCCATTTGT+GGG 0.566271 4_2:+65404454 Msa0615850:CDS
TCATCAACAAAGACAATGCA+AGG 0.570490 4_2:-65403870 None:intergenic
ACGTTTGATTCGTTTCACTT+CGG 0.571131 4_2:-65402413 None:intergenic
AGAAGCTCTTGGCTAAGTCC+AGG 0.571364 4_2:-65403330 None:intergenic
ATCAGAGTTGGGTCATCGGA+AGG 0.574711 4_2:-65404728 None:intergenic
CACAGCCTCAACAATAGCTA+TGG 0.575621 4_2:-65403262 None:intergenic
GGGAAGGACCGAAATCCTAA+AGG 0.575874 4_2:+65404188 Msa0615850:CDS
CCTGAGGTTACAACTGGTGC+AGG 0.577792 4_2:+65404827 Msa0615850:CDS
GTGTATTGTTCCTTCTCTCG+AGG 0.578733 4_2:+65403466 Msa0615850:CDS
GGTGATTTGCAGCAAATCAC+CGG 0.580836 4_2:+65404851 Msa0615850:CDS
AGGATTGTTGCTGGAATGGA+AGG 0.581374 4_2:+65404384 Msa0615850:CDS
GTGAGAGAAGAATGTATGGA+AGG 0.584999 4_2:-65402555 None:intergenic
GACGCTGTTGGAAGACAAAG+AGG 0.585021 4_2:+65403897 Msa0615850:CDS
CGATGTTATCATGAGAATGA+TGG 0.588855 4_2:+65405357 Msa0615850:CDS
AGAATTGTTGGAGGATTAGG+TGG 0.589670 4_2:+65404773 Msa0615850:CDS
CCTGCACCAGTTGTAACCTC+AGG 0.590727 4_2:-65404827 None:intergenic
TGTTGTTGCTGCAACTAACA+GGG 0.592269 4_2:+65404013 Msa0615850:CDS
AATTTGAAGCATAATGAAGA+GGG 0.592978 4_2:-65405686 None:intergenic
TTCCTCTGCACTGCACTCAG+AGG 0.596377 4_2:+65402526 Msa0615850:five_prime_UTR
CAATCTTATCAATTGCCTCA+CGG 0.597266 4_2:-65405483 None:intergenic
GGTGGAATGGGAGGTCCCGG+TGG 0.599843 4_2:+65403495 Msa0615850:CDS
AAATTGCATTGACACAGATA+AGG 0.602585 4_2:+65405455 Msa0615850:CDS
ATAGGAAATCCAGGTCCACC+GGG 0.605635 4_2:-65403510 None:intergenic
CTGGAGAAGGAGACATTGAG+TGG 0.609730 4_2:+65405517 Msa0615850:CDS
AATCAGCAGGAAGGAAGAAG+GGG 0.612772 4_2:+65403066 Msa0615850:CDS
TGAGGCAATTGATAAGATTG+TGG 0.614636 4_2:+65405486 Msa0615850:CDS
AACCTCTGAGTGCAGTGCAG+AGG 0.616661 4_2:-65402528 None:intergenic
GAGGGACAGGAATTGGTGGA+GGG 0.622613 4_2:+65403916 Msa0615850:CDS
AAATTTGAAGCATAATGAAG+AGG 0.624871 4_2:-65405687 None:intergenic
ATGAGAACACCTGGTTTCAG+CGG 0.626005 4_2:+65404264 Msa0615850:CDS
TTATCATGAGAATGATGGCA+AGG 0.626312 4_2:+65405362 Msa0615850:CDS
TCAATGTCTCCTTCTCCAGA+AGG 0.626501 4_2:-65405513 None:intergenic
AAGGAACATTAATGACCGAT+GGG 0.627659 4_2:+65404403 Msa0615850:CDS
GATTTATGAAGGATTGGGTG+TGG 0.627688 4_2:-65402466 None:intergenic
ATGTTCCAGATGTAAGGGGA+AGG 0.629803 4_2:+65404172 Msa0615850:CDS
CTGGTCGGCGAGGAAGGACA+GGG 0.631120 4_2:+65404328 Msa0615850:CDS
TAACGCAGAGTCAAGAATGT+CGG 0.631624 4_2:-65404036 None:intergenic
AATTTCTCAAGAAGCCTGAG+AGG 0.635500 4_2:+65403643 Msa0615850:CDS
GTGATTGCAATGAGAACACC+TGG 0.637344 4_2:+65404255 Msa0615850:CDS
AAATTGTTGCTTGGAAATGT+CGG 0.643358 4_2:+65403096 Msa0615850:CDS
AAGCTGCTATATTAGCTGGT+CGG 0.645613 4_2:+65404313 Msa0615850:CDS
TATTGTTCCTTCTCTCGAGG+CGG 0.648203 4_2:+65403469 Msa0615850:CDS
TTGGAACAAAATCAGCAGGA+AGG 0.651292 4_2:+65403057 Msa0615850:CDS
GAGGTTACAACTGGTGCAGG+TGG 0.653393 4_2:+65404830 Msa0615850:CDS
ACTGCTACTGGAGTTGAAGG+AGG 0.656492 4_2:-65405598 None:intergenic
AAAGTCTTTCCGGTTCCTGG+AGG 0.658551 4_2:-65403714 None:intergenic
GTTGATGTTCCAGATGTAAG+GGG 0.661366 4_2:+65404168 Msa0615850:CDS
AGACCCCGAGCTTGACCTCG+AGG 0.661905 4_2:-65404692 None:intergenic
CTTATGCTGCTGATGAACAA+GGG 0.662325 4_2:+65403154 Msa0615850:CDS
GACGAGTCCATAAGTGACCA+AGG 0.664033 4_2:-65405322 None:intergenic
GTTCCTCGAGGTCAAGCTCG+GGG 0.664861 4_2:+65404689 Msa0615850:CDS
TGGAACCATAGCTATTGTTG+AGG 0.667930 4_2:+65403257 Msa0615850:CDS
TGCAGCAACAACAATGACAC+CGG 0.667957 4_2:-65404003 None:intergenic
GCTATATTAGCTGGTCGGCG+AGG 0.669032 4_2:+65404318 Msa0615850:CDS
ACATACAGGCCATTCAAACA+GGG 0.675696 4_2:-65405621 None:intergenic
TTTGACTCCTGGTCATGATG+CGG 0.676383 4_2:+65404649 Msa0615850:CDS
ATGGACTCGTCAGCACAAAG+TGG 0.693906 4_2:+65405334 Msa0615850:CDS
ATCTGACAATCTCTTGACAG+CGG 0.699497 4_2:-65405422 None:intergenic
ACGCTGTTGGAAGACAAAGA+GGG 0.714582 4_2:+65403898 Msa0615850:CDS
ACGTTAATAGAAAGCCACGT+AGG 0.716810 4_2:+65402432 Msa0615850:five_prime_UTR
ATCAGCAGGAAGGAAGAAGG+GGG 0.718080 4_2:+65403067 Msa0615850:CDS
TAAACTCTGACAGTAGAGCG+CGG 0.727648 4_2:-65405549 None:intergenic
ATACACCAATGACAGCAGCA+GGG 0.728875 4_2:-65403449 None:intergenic
TGGCTAGAGGAAGACCTACG+TGG 0.731437 4_2:-65402446 None:intergenic
AAGGTGACATTAGTTCCTCG+AGG 0.734920 4_2:+65404677 Msa0615850:CDS
CCTCGAATACGACATTCTGG+AGG 0.741604 4_2:-65403181 None:intergenic
ACAGATAAGGAACAACCGTG+AGG 0.756868 4_2:+65405468 Msa0615850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATTACTAAAAATAATGA+AGG - chr4_2:65402677-65402696 None:intergenic 15.0%
!!! TTCTTTTTAGTTGTATATTA+TGG + chr4_2:65402698-65402717 Msa0615850:intron 15.0%
!! AATATAAATCTACAAAAAAG+AGG - chr4_2:65402741-65402760 None:intergenic 15.0%
!! AACTAATTATATGTTTAACA+GGG - chr4_2:65402839-65402858 None:intergenic 15.0%
!!! ATTTTCATCATTCAATAATA+AGG + chr4_2:65403005-65403024 Msa0615850:CDS 15.0%
!! GTATGAATATGATTATATTA+CGG + chr4_2:65404086-65404105 Msa0615850:intron 15.0%
!! TAATCATTCATAAACATATA+AGG - chr4_2:65404116-65404135 None:intergenic 15.0%
!! AAATAAAAGGAAGAAAAAAT+AGG - chr4_2:65404927-65404946 None:intergenic 15.0%
!! TTCCTAAAAAAAATAGTTAA+AGG - chr4_2:65405069-65405088 None:intergenic 15.0%
!! AATCAAAAGATATTATTGTA+AGG - chr4_2:65405226-65405245 None:intergenic 15.0%
!! ATTATAAAATAACTACATAC+AGG - chr4_2:65405638-65405657 None:intergenic 15.0%
!!! AAAGAGGTTTTTAGATTAAA+GGG - chr4_2:65402725-65402744 None:intergenic 20.0%
!!! AAAAGAGGTTTTTAGATTAA+AGG - chr4_2:65402726-65402745 None:intergenic 20.0%
!! AATTAATTTACAACCACAAT+TGG + chr4_2:65402801-65402820 Msa0615850:intron 20.0%
!! GAAATAAATAAATCCAATTG+TGG - chr4_2:65402817-65402836 None:intergenic 20.0%
!! CAACTAATTATATGTTTAAC+AGG - chr4_2:65402840-65402859 None:intergenic 20.0%
!! AAGATTAAGACTTCATAATT+TGG + chr4_2:65402869-65402888 Msa0615850:intron 20.0%
!!! TTTTCATGCTACAAAATAAA+AGG - chr4_2:65404940-65404959 None:intergenic 20.0%
!! TAGATACAACTACAATTAAT+TGG + chr4_2:65405002-65405021 Msa0615850:intron 20.0%
!!! TGCCTTTAACTATTTTTTTT+AGG + chr4_2:65405064-65405083 Msa0615850:intron 20.0%
!! AAGATATTATTGTAAGGAAT+AGG - chr4_2:65405220-65405239 None:intergenic 20.0%
!!! TCTCTCACATTTTACTTTTA+AGG + chr4_2:65402570-65402589 Msa0615850:five_prime_UTR 25.0%
! ATTCTCATATAGATCAACTT+TGG - chr4_2:65403238-65403257 None:intergenic 25.0%
!! AAAGTTGATCTATATGAGAA+TGG + chr4_2:65403237-65403256 Msa0615850:CDS 25.0%
!!! TCTCTTTTGTTTAATCTCAT+TGG + chr4_2:65403414-65403433 Msa0615850:CDS 25.0%
!!! CTCTTTTGTTTAATCTCATT+GGG + chr4_2:65403415-65403434 Msa0615850:CDS 25.0%
! TTGTAACATCTATTTGTACT+TGG + chr4_2:65404617-65404636 Msa0615850:intron 25.0%
! AAAAAATAGGAGATATGATG+CGG - chr4_2:65404914-65404933 None:intergenic 25.0%
! CATTGAAGAAATCATATGAT+TGG - chr4_2:65405046-65405065 None:intergenic 25.0%
! AGGAAACCAAATATAGTATA+AGG + chr4_2:65405121-65405140 Msa0615850:intron 25.0%
! CAAGTTCCTTATACTATATT+TGG - chr4_2:65405130-65405149 None:intergenic 25.0%
! CAAATATAGTATAAGGAACT+TGG + chr4_2:65405128-65405147 Msa0615850:intron 25.0%
!! AATTTGAAGCATAATGAAGA+GGG - chr4_2:65405689-65405708 None:intergenic 25.0%
!! AAATTTGAAGCATAATGAAG+AGG - chr4_2:65405690-65405709 None:intergenic 25.0%
! AAGTGGATTTATGAAGGATT+GGG - chr4_2:65402474-65402493 None:intergenic 30.0%
AAATGTGAGAGAAGAATGTA+TGG - chr4_2:65402562-65402581 None:intergenic 30.0%
! CTTCATAATTTGGTTTCAGA+TGG + chr4_2:65402879-65402898 Msa0615850:intron 30.0%
CTTTATCCACAAACAGTAAT+AGG + chr4_2:65402932-65402951 Msa0615850:CDS 30.0%
TAATAGGACTACTCTTAGTA+AGG + chr4_2:65402948-65402967 Msa0615850:CDS 30.0%
ACTCTTAGTAAGGATTTGAA+TGG + chr4_2:65402958-65402977 Msa0615850:CDS 30.0%
! GAAGATATCTCTTTTCATCA+TGG + chr4_2:65402980-65402999 Msa0615850:CDS 30.0%
!!! ATTTTCCATAAAAGCATCCT+TGG + chr4_2:65403038-65403057 Msa0615850:CDS 30.0%
! AAATTGTTGCTTGGAAATGT+CGG + chr4_2:65403096-65403115 Msa0615850:CDS 30.0%
GTTTCTTGAGTATTTGGATA+AGG + chr4_2:65403203-65403222 Msa0615850:CDS 30.0%
TCATAATGCTCAAGAAGATT+CGG + chr4_2:65403389-65403408 Msa0615850:CDS 30.0%
! ATCTAAAGCCAAGTTTCAAA+TGG + chr4_2:65403545-65403564 Msa0615850:CDS 30.0%
GAACCTGATATAGAGAAAAA+CGG - chr4_2:65403774-65403793 None:intergenic 30.0%
TAGCTTTCTTGAACAAATCA+CGG - chr4_2:65403839-65403858 None:intergenic 30.0%
!! ATTGATCAGAATGTTTTTGC+AGG + chr4_2:65404140-65404159 Msa0615850:intron 30.0%
TATTGTTAGCATGAACCTTT+AGG - chr4_2:65404206-65404225 None:intergenic 30.0%
ATAGAATCGTCAATCTCTTT+AGG - chr4_2:65404360-65404379 None:intergenic 30.0%
AGATTGACGATTCTATTGAT+AGG + chr4_2:65404364-65404383 Msa0615850:CDS 30.0%
TCTAAAAATTCCCACAAAGT+TGG + chr4_2:65404593-65404612 Msa0615850:intron 30.0%
ATGTTACAAACCAACTTTGT+GGG - chr4_2:65404606-65404625 None:intergenic 30.0%
! GCAGCAGAAGAAATTATTTT+TGG + chr4_2:65404800-65404819 Msa0615850:CDS 30.0%
CATTTATCTAGACATCAGAA+AGG - chr4_2:65405251-65405270 None:intergenic 30.0%
! ACATTTGGAATGTCTGATAT+TGG + chr4_2:65405298-65405317 Msa0615850:CDS 30.0%
! AAATTGCATTGACACAGATA+AGG + chr4_2:65405455-65405474 Msa0615850:CDS 30.0%
CTGAAATTCCAGTTGAAAAT+CGG + chr4_2:65405572-65405591 Msa0615850:CDS 30.0%
TGAAATTCCAGTTGAAAATC+GGG + chr4_2:65405573-65405592 Msa0615850:CDS 30.0%
! ACGTTTGATTCGTTTCACTT+CGG - chr4_2:65402416-65402435 None:intergenic 35.0%
! CAAGTGGATTTATGAAGGAT+TGG - chr4_2:65402475-65402494 None:intergenic 35.0%
! AGCAACAAGTGGATTTATGA+AGG - chr4_2:65402480-65402499 None:intergenic 35.0%
! AAGTGATGATGAAGAAGAGT+TGG - chr4_2:65402507-65402526 None:intergenic 35.0%
AGTAGTCCTATTACTGTTTG+TGG - chr4_2:65402941-65402960 None:intergenic 35.0%
! TTGTTCCAAGGATGCTTTTA+TGG - chr4_2:65403046-65403065 None:intergenic 35.0%
!! GGGATTCTAAAATTGTTGCT+TGG + chr4_2:65403087-65403106 Msa0615850:CDS 35.0%
TTTCCATTTCCCAATAATGC+CGG - chr4_2:65403132-65403151 None:intergenic 35.0%
TTCGAGGTTTCTTGAGTATT+TGG + chr4_2:65403197-65403216 Msa0615850:CDS 35.0%
! TGAATTTCTGAAGAAGCTCT+TGG - chr4_2:65403344-65403363 None:intergenic 35.0%
AAGAGCTTCTTCAGAAATTC+AGG + chr4_2:65403343-65403362 Msa0615850:CDS 35.0%
AGAGCTTCTTCAGAAATTCA+GGG + chr4_2:65403344-65403363 Msa0615850:CDS 35.0%
CATAATGCTCAAGAAGATTC+GGG + chr4_2:65403390-65403409 Msa0615850:CDS 35.0%
TTAGATTGACCGAATTGCAT+AGG - chr4_2:65403531-65403550 None:intergenic 35.0%
! GTTTGGTTCCATTTGAAACT+TGG - chr4_2:65403556-65403575 None:intergenic 35.0%
TTTCAAATGGAACCAAACAC+TGG + chr4_2:65403558-65403577 Msa0615850:CDS 35.0%
!!! TGACTTTTGATGATGTTGCT+GGG + chr4_2:65403583-65403602 Msa0615850:CDS 35.0%
!! GTTCCGTTTTTCTCTATATC+AGG + chr4_2:65403768-65403787 Msa0615850:CDS 35.0%
!! GAGTTTGTTGAGATGTTTGT+TGG + chr4_2:65403795-65403814 Msa0615850:CDS 35.0%
! GTTGAGATGTTTGTTGGTAT+TGG + chr4_2:65403801-65403820 Msa0615850:CDS 35.0%
TCATCAACAAAGACAATGCA+AGG - chr4_2:65403873-65403892 None:intergenic 35.0%
! TTCTGTCAAAAGTTGGTTGA+GGG - chr4_2:65403961-65403980 None:intergenic 35.0%
! TTTCTGTCAAAAGTTGGTTG+AGG - chr4_2:65403962-65403981 None:intergenic 35.0%
! CAACCAACTTTTGACAGAAA+TGG + chr4_2:65403962-65403981 Msa0615850:CDS 35.0%
! CAACTTTTGACAGAAATGGA+CGG + chr4_2:65403966-65403985 Msa0615850:CDS 35.0%
TTCATACCTGTCTATCGAAT+CGG - chr4_2:65404073-65404092 None:intergenic 35.0%
!! CAGAATGTTTTTGCAGGTAT+CGG + chr4_2:65404146-65404165 Msa0615850:intron 35.0%
!! AGCATGAACCTTTAGGATTT+CGG - chr4_2:65404199-65404218 None:intergenic 35.0%
AATGAAGCTGCTATATTAGC+TGG + chr4_2:65404309-65404328 Msa0615850:CDS 35.0%
TCTATTGATAGGATTGTTGC+TGG + chr4_2:65404375-65404394 Msa0615850:CDS 35.0%
AAGGAACATTAATGACCGAT+GGG + chr4_2:65404403-65404422 Msa0615850:CDS 35.0%
! TAAACTTTTGCTCTTCCCAT+CGG - chr4_2:65404421-65404440 None:intergenic 35.0%
TTAGTGGCATATCATGAAGT+TGG + chr4_2:65404438-65404457 Msa0615850:CDS 35.0%
GCTAATTTCTTACCCACAAA+TGG - chr4_2:65404469-65404488 None:intergenic 35.0%
GTAACATTGCAATGAAAGCA+AGG + chr4_2:65404520-65404539 Msa0615850:intron 35.0%
!! CTTTGTGGGAATTTTTAGAG+TGG - chr4_2:65404592-65404611 None:intergenic 35.0%
GATGTTACAAACCAACTTTG+TGG - chr4_2:65404607-65404626 None:intergenic 35.0%
!!! GTTGTTTTGAGATCAGAGTT+GGG - chr4_2:65404742-65404761 None:intergenic 35.0%
!!! TGTTGTTTTGAGATCAGAGT+TGG - chr4_2:65404743-65404762 None:intergenic 35.0%
CAACTCTTTGCAAGAATTGT+TGG + chr4_2:65404761-65404780 Msa0615850:CDS 35.0%
!!! AATTATTTTTGGTGAGCCTG+AGG + chr4_2:65404811-65404830 Msa0615850:CDS 35.0%
! AATTACCTGTCTTGCTATAC+CGG - chr4_2:65404873-65404892 None:intergenic 35.0%
GTTAATGATACTCTTGCAGA+TGG + chr4_2:65405270-65405289 Msa0615850:intron 35.0%
CGATGTTATCATGAGAATGA+TGG + chr4_2:65405357-65405376 Msa0615850:CDS 35.0%
TTATCATGAGAATGATGGCA+AGG + chr4_2:65405362-65405381 Msa0615850:CDS 35.0%
CAATCTTATCAATTGCCTCA+CGG - chr4_2:65405486-65405505 None:intergenic 35.0%
TGAGGCAATTGATAAGATTG+TGG + chr4_2:65405486-65405505 Msa0615850:CDS 35.0%
ACGTTAATAGAAAGCCACGT+AGG + chr4_2:65402432-65402451 Msa0615850:five_prime_UTR 40.0%
GATTTATGAAGGATTGGGTG+TGG - chr4_2:65402469-65402488 None:intergenic 40.0%
GTGAGAGAAGAATGTATGGA+AGG - chr4_2:65402558-65402577 None:intergenic 40.0%
ATCCTTGGAACAAAATCAGC+AGG + chr4_2:65403053-65403072 Msa0615850:CDS 40.0%
!!! TTCCTGCTGATTTTGTTCCA+AGG - chr4_2:65403058-65403077 None:intergenic 40.0%
TTGGAACAAAATCAGCAGGA+AGG + chr4_2:65403057-65403076 Msa0615850:CDS 40.0%
AAAATCAGCAGGAAGGAAGA+AGG + chr4_2:65403064-65403083 Msa0615850:CDS 40.0%
AAATCAGCAGGAAGGAAGAA+GGG + chr4_2:65403065-65403084 Msa0615850:CDS 40.0%
CTTATGCTGCTGATGAACAA+GGG + chr4_2:65403154-65403173 Msa0615850:CDS 40.0%
AAACCTCGAATACGACATTC+TGG - chr4_2:65403187-65403206 None:intergenic 40.0%
TGGAACCATAGCTATTGTTG+AGG + chr4_2:65403257-65403276 Msa0615850:CDS 40.0%
TGTCTCCTGAATTGGGAAAT+AGG + chr4_2:65403283-65403302 Msa0615850:CDS 40.0%
TGCAACCTATTTCCCAATTC+AGG - chr4_2:65403291-65403310 None:intergenic 40.0%
CCTGGATTTCCTATGCAATT+CGG + chr4_2:65403519-65403538 Msa0615850:CDS 40.0%
TCAAAAGTCACTCCAGTGTT+TGG - chr4_2:65403573-65403592 None:intergenic 40.0%
!!! GTGACTTTTGATGATGTTGC+TGG + chr4_2:65403582-65403601 Msa0615850:CDS 40.0%
!!! GACTTTTGATGATGTTGCTG+GGG + chr4_2:65403584-65403603 Msa0615850:CDS 40.0%
! TGAAGCCAAGCAGGATTTTA+TGG + chr4_2:65403611-65403630 Msa0615850:CDS 40.0%
AATTTCTCAAGAAGCCTGAG+AGG + chr4_2:65403643-65403662 Msa0615850:CDS 40.0%
! CCAACAAGAAGAACTCCTTT+TGG - chr4_2:65403693-65403712 None:intergenic 40.0%
CCAAAAGGAGTTCTTCTTGT+TGG + chr4_2:65403690-65403709 Msa0615850:CDS 40.0%
! GTTGATGAAATTGACGCTGT+TGG + chr4_2:65403885-65403904 Msa0615850:CDS 40.0%
CGTCCATTTCTGTCAAAAGT+TGG - chr4_2:65403968-65403987 None:intergenic 40.0%
! ACAGAAATGGACGGATTTGA+GGG + chr4_2:65403975-65403994 Msa0615850:CDS 40.0%
! TTGTTGTTGCTGCAACTAAC+AGG + chr4_2:65404012-65404031 Msa0615850:CDS 40.0%
TGTTGTTGCTGCAACTAACA+GGG + chr4_2:65404013-65404032 Msa0615850:CDS 40.0%
TAACGCAGAGTCAAGAATGT+CGG - chr4_2:65404039-65404058 None:intergenic 40.0%
! GGTTGATGTTCCAGATGTAA+GGG + chr4_2:65404167-65404186 Msa0615850:CDS 40.0%
GTTGATGTTCCAGATGTAAG+GGG + chr4_2:65404168-65404187 Msa0615850:CDS 40.0%
AAGCTGCTATATTAGCTGGT+CGG + chr4_2:65404313-65404332 Msa0615850:CDS 40.0%
TGATAGGATTGTTGCTGGAA+TGG + chr4_2:65404380-65404399 Msa0615850:CDS 40.0%
GAAGGAACATTAATGACCGA+TGG + chr4_2:65404402-65404421 Msa0615850:CDS 40.0%
TGGGAAGAGCAAAAGTTTAG+TGG + chr4_2:65404422-65404441 Msa0615850:CDS 40.0%
! AAGTTGGTCATGCCATTTGT+GGG + chr4_2:65404454-65404473 Msa0615850:CDS 40.0%
! GCAATGAAAGCAAGGTTTTG+TGG + chr4_2:65404528-65404547 Msa0615850:intron 40.0%
CTCTTTGCAAGAATTGTTGG+AGG + chr4_2:65404764-65404783 Msa0615850:CDS 40.0%
GCAAGAATTGTTGGAGGATT+AGG + chr4_2:65404770-65404789 Msa0615850:CDS 40.0%
AGAATTGTTGGAGGATTAGG+TGG + chr4_2:65404773-65404792 Msa0615850:CDS 40.0%
AAAATGTTAACTACTGCCCC+CGG + chr4_2:65405087-65405106 Msa0615850:intron 40.0%
AAATCTGCAGCATCGTTGTA+AGG - chr4_2:65405189-65405208 None:intergenic 40.0%
AACGATGCTGCAGATTTAGA+AGG + chr4_2:65405192-65405211 Msa0615850:intron 40.0%
TTGCAGATGGTAGTCACATT+TGG + chr4_2:65405283-65405302 Msa0615850:intron 40.0%
GAATGTCTGATATTGGTCCT+TGG + chr4_2:65405305-65405324 Msa0615850:CDS 40.0%
TATTGGTCCTTGGTCACTTA+TGG + chr4_2:65405315-65405334 Msa0615850:CDS 40.0%
ATCTGACAATCTCTTGACAG+CGG - chr4_2:65405425-65405444 None:intergenic 40.0%
TAAGATTGTGGAAGTCCTTC+TGG + chr4_2:65405498-65405517 Msa0615850:CDS 40.0%
ACATACAGGCCATTCAAACA+GGG - chr4_2:65405624-65405643 None:intergenic 40.0%
TACATACAGGCCATTCAAAC+AGG - chr4_2:65405625-65405644 None:intergenic 40.0%
GCATAATGAAGAGGGTAACT+TGG - chr4_2:65405681-65405700 None:intergenic 40.0%
GAGTTGGAGTTAGCAACAAG+TGG - chr4_2:65402491-65402510 None:intergenic 45.0%
GCATCATCAGCATGTCTTGT+TGG + chr4_2:65402904-65402923 Msa0615850:CDS 45.0%
AATCAGCAGGAAGGAAGAAG+GGG + chr4_2:65403066-65403085 Msa0615850:CDS 45.0%
TTGCTTGGAAATGTCGGTGT+TGG + chr4_2:65403102-65403121 Msa0615850:CDS 45.0%
!! AAATGTCGGTGTTGGTTTGC+CGG + chr4_2:65403110-65403129 Msa0615850:CDS 45.0%
!! TGTTGGTTTGCCGGCATTAT+TGG + chr4_2:65403119-65403138 Msa0615850:CDS 45.0%
!! GTTGGTTTGCCGGCATTATT+GGG + chr4_2:65403120-65403139 Msa0615850:CDS 45.0%
TTGCCGGCATTATTGGGAAA+TGG + chr4_2:65403126-65403145 Msa0615850:CDS 45.0%
GCTTATGCTGCTGATGAACA+AGG + chr4_2:65403153-65403172 Msa0615850:CDS 45.0%
CACAGCCTCAACAATAGCTA+TGG - chr4_2:65403265-65403284 None:intergenic 45.0%
ATACACCAATGACAGCAGCA+GGG - chr4_2:65403452-65403471 None:intergenic 45.0%
AATACACCAATGACAGCAGC+AGG - chr4_2:65403453-65403472 None:intergenic 45.0%
GTGTATTGTTCCTTCTCTCG+AGG + chr4_2:65403466-65403485 Msa0615850:CDS 45.0%
TATTGTTCCTTCTCTCGAGG+CGG + chr4_2:65403469-65403488 Msa0615850:CDS 45.0%
CCGAATTGCATAGGAAATCC+AGG - chr4_2:65403522-65403541 None:intergenic 45.0%
!!! TTTTGATGATGTTGCTGGGG+TGG + chr4_2:65403587-65403606 Msa0615850:CDS 45.0%
! AGCCAAGCAGGATTTTATGG+AGG + chr4_2:65403614-65403633 Msa0615850:CDS 45.0%
CACCTCCATAAAATCCTGCT+TGG - chr4_2:65403619-65403638 None:intergenic 45.0%
! CAAGCAGGATTTTATGGAGG+TGG + chr4_2:65403617-65403636 Msa0615850:CDS 45.0%
AACAAAGTCTTTCCGGTTCC+TGG - chr4_2:65403720-65403739 None:intergenic 45.0%
AGGAACCGGAAAGACTTTGT+TGG + chr4_2:65403719-65403738 Msa0615850:CDS 45.0%
CTTGGCCAACAAAGTCTTTC+CGG - chr4_2:65403727-65403746 None:intergenic 45.0%
ACGCTGTTGGAAGACAAAGA+GGG + chr4_2:65403898-65403917 Msa0615850:CDS 45.0%
AGACAAAGAGGGACAGGAAT+TGG + chr4_2:65403909-65403928 Msa0615850:CDS 45.0%
! GACAGAAATGGACGGATTTG+AGG + chr4_2:65403974-65403993 Msa0615850:CDS 45.0%
! GACGGATTTGAGGGTAATAC+CGG + chr4_2:65403984-65404003 Msa0615850:CDS 45.0%
TGCAGCAACAACAATGACAC+CGG - chr4_2:65404006-65404025 None:intergenic 45.0%
! CGGTTGATGTTCCAGATGTA+AGG + chr4_2:65404166-65404185 Msa0615850:CDS 45.0%
ATGTTCCAGATGTAAGGGGA+AGG + chr4_2:65404172-65404191 Msa0615850:CDS 45.0%
GTGATTGCAATGAGAACACC+TGG + chr4_2:65404255-65404274 Msa0615850:CDS 45.0%
ATGAGAACACCTGGTTTCAG+CGG + chr4_2:65404264-65404283 Msa0615850:CDS 45.0%
AGGATTGTTGCTGGAATGGA+AGG + chr4_2:65404384-65404403 Msa0615850:CDS 45.0%
! GAAGTTGGTCATGCCATTTG+TGG + chr4_2:65404453-65404472 Msa0615850:CDS 45.0%
TTTGACTCCTGGTCATGATG+CGG + chr4_2:65404649-65404668 Msa0615850:CDS 45.0%
! TTTTGTACCGCATCATGACC+AGG - chr4_2:65404659-65404678 None:intergenic 45.0%
TGGTCATGATGCGGTACAAA+AGG + chr4_2:65404658-65404677 Msa0615850:CDS 45.0%
AAGGTGACATTAGTTCCTCG+AGG + chr4_2:65404677-65404696 Msa0615850:CDS 45.0%
TGAGATCAGAGTTGGGTCAT+CGG - chr4_2:65404735-65404754 None:intergenic 45.0%
TTGTTGGAGGATTAGGTGGT+AGG + chr4_2:65404777-65404796 Msa0615850:CDS 45.0%
TGTTGGAGGATTAGGTGGTA+GGG + chr4_2:65404778-65404797 Msa0615850:CDS 45.0%
! GGTGATTTGCAGCAAATCAC+CGG + chr4_2:65404851-65404870 Msa0615850:CDS 45.0%
AATCACCGGTATAGCAAGAC+AGG + chr4_2:65404865-65404884 Msa0615850:CDS 45.0%
AAATGTTAACTACTGCCCCC+GGG + chr4_2:65405088-65405107 Msa0615850:intron 45.0%
GCAGCATCGTTGTAAGGAAT+AGG - chr4_2:65405183-65405202 None:intergenic 45.0%
ACAGATAAGGAACAACCGTG+AGG + chr4_2:65405468-65405487 Msa0615850:CDS 45.0%
TCAATGTCTCCTTCTCCAGA+AGG - chr4_2:65405516-65405535 None:intergenic 45.0%
TAAACTCTGACAGTAGAGCG+CGG - chr4_2:65405552-65405571 None:intergenic 45.0%
ATTCAAACAGGGACTGCTAC+TGG - chr4_2:65405613-65405632 None:intergenic 45.0%
AGTAGCAGTCCCTGTTTGAA+TGG + chr4_2:65405612-65405631 Msa0615850:exon 45.0%
ATCAGCAGGAAGGAAGAAGG+GGG + chr4_2:65403067-65403086 Msa0615850:CDS 50.0%
CCTCGAATACGACATTCTGG+AGG - chr4_2:65403184-65403203 None:intergenic 50.0%
CCTCCAGAATGTCGTATTCG+AGG + chr4_2:65403181-65403200 Msa0615850:CDS 50.0%
TGAGGCTGTGTCTCCTGAAT+TGG + chr4_2:65403275-65403294 Msa0615850:CDS 50.0%
GAGGCTGTGTCTCCTGAATT+GGG + chr4_2:65403276-65403295 Msa0615850:CDS 50.0%
! CGTGTTCGAGTTCAACTTCC+TGG + chr4_2:65403312-65403331 Msa0615850:CDS 50.0%
AGAAGCTCTTGGCTAAGTCC+AGG - chr4_2:65403333-65403352 None:intergenic 50.0%
ATAGGAAATCCAGGTCCACC+GGG - chr4_2:65403513-65403532 None:intergenic 50.0%
CATAGGAAATCCAGGTCCAC+CGG - chr4_2:65403514-65403533 None:intergenic 50.0%
CCAACAGAAGTGAACCTCTC+AGG - chr4_2:65403660-65403679 None:intergenic 50.0%
CCTGAGAGGTTCACTTCTGT+TGG + chr4_2:65403657-65403676 Msa0615850:CDS 50.0%
! GTTGGTGCTCGCATTCCAAA+AGG + chr4_2:65403675-65403694 Msa0615850:CDS 50.0%
GTTCTTCTTGTTGGTCCTCC+AGG + chr4_2:65403699-65403718 Msa0615850:CDS 50.0%
AAAGTCTTTCCGGTTCCTGG+AGG - chr4_2:65403717-65403736 None:intergenic 50.0%
CGGAAAGACTTTGTTGGCCA+AGG + chr4_2:65403725-65403744 Msa0615850:CDS 50.0%
TTGTTGGCCAAGGCTATTGC+TGG + chr4_2:65403735-65403754 Msa0615850:CDS 50.0%
CAAGGCTATTGCTGGTGAAG+CGG + chr4_2:65403743-65403762 Msa0615850:CDS 50.0%
AAGGCTATTGCTGGTGAAGC+GGG + chr4_2:65403744-65403763 Msa0615850:CDS 50.0%
GACGCTGTTGGAAGACAAAG+AGG + chr4_2:65403897-65403916 Msa0615850:CDS 50.0%
GTTGGAAGACAAAGAGGGAC+AGG + chr4_2:65403903-65403922 Msa0615850:CDS 50.0%
CAAAGAGGGACAGGAATTGG+TGG + chr4_2:65403912-65403931 Msa0615850:CDS 50.0%
GACTCTGCGTTATTGAGACC+AGG + chr4_2:65404047-65404066 Msa0615850:CDS 50.0%
GGGAAGGACCGAAATCCTAA+AGG + chr4_2:65404188-65404207 Msa0615850:CDS 50.0%
GGTTGCAGAACTTTGACTCC+TGG + chr4_2:65404638-65404657 Msa0615850:intron 50.0%
TAGTTCCTCGAGGTCAAGCT+CGG + chr4_2:65404687-65404706 Msa0615850:CDS 50.0%
ATCAGAGTTGGGTCATCGGA+AGG - chr4_2:65404731-65404750 None:intergenic 50.0%
AATGTTAACTACTGCCCCCG+GGG + chr4_2:65405089-65405108 Msa0615850:intron 50.0%
GACGAGTCCATAAGTGACCA+AGG - chr4_2:65405325-65405344 None:intergenic 50.0%
ATGGACTCGTCAGCACAAAG+TGG + chr4_2:65405334-65405353 Msa0615850:CDS 50.0%
! TGTGGAAGTCCTTCTGGAGA+AGG + chr4_2:65405504-65405523 Msa0615850:CDS 50.0%
CTGGAGAAGGAGACATTGAG+TGG + chr4_2:65405517-65405536 Msa0615850:CDS 50.0%
! GGAGGAACCCGATTTTCAAC+TGG - chr4_2:65405583-65405602 None:intergenic 50.0%
ACTGCTACTGGAGTTGAAGG+AGG - chr4_2:65405601-65405620 None:intergenic 50.0%
TGGCTAGAGGAAGACCTACG+TGG - chr4_2:65402449-65402468 None:intergenic 55.0%
GAAGGATTGGGTGTGGCTAG+AGG - chr4_2:65402462-65402481 None:intergenic 55.0%
TTCCTCTGCACTGCACTCAG+AGG + chr4_2:65402526-65402545 Msa0615850:five_prime_UTR 55.0%
AACCTCTGAGTGCAGTGCAG+AGG - chr4_2:65402531-65402550 None:intergenic 55.0%
GCTTTCCCTGCTGCTGTCAT+TGG + chr4_2:65403444-65403463 Msa0615850:CDS 55.0%
CTTGTTGGTCCTCCAGGAAC+CGG + chr4_2:65403705-65403724 Msa0615850:CDS 55.0%
CGCTTCACCAGCAATAGCCT+TGG - chr4_2:65403745-65403764 None:intergenic 55.0%
AGAGGGACAGGAATTGGTGG+AGG + chr4_2:65403915-65403934 Msa0615850:CDS 55.0%
GAGGGACAGGAATTGGTGGA+GGG + chr4_2:65403916-65403935 Msa0615850:CDS 55.0%
!! ACCAGGCCGATTCGATAGAC+AGG + chr4_2:65404064-65404083 Msa0615850:CDS 55.0%
ACCTGTCTATCGAATCGGCC+TGG - chr4_2:65404068-65404087 None:intergenic 55.0%
TCGGTCCTTCCCCTTACATC+TGG - chr4_2:65404180-65404199 None:intergenic 55.0%
AGATCAGCTCCGCTGAAACC+AGG - chr4_2:65404276-65404295 None:intergenic 55.0%
GCTATATTAGCTGGTCGGCG+AGG + chr4_2:65404318-65404337 Msa0615850:CDS 55.0%
TATTAGCTGGTCGGCGAGGA+AGG + chr4_2:65404322-65404341 Msa0615850:CDS 55.0%
AGTTCCTCGAGGTCAAGCTC+GGG + chr4_2:65404688-65404707 Msa0615850:CDS 55.0%
GTCAAGCTCGGGGTCTTACA+TGG + chr4_2:65404699-65404718 Msa0615850:CDS 55.0%
GGTGAGCCTGAGGTTACAAC+TGG + chr4_2:65404821-65404840 Msa0615850:CDS 55.0%
CCTGCACCAGTTGTAACCTC+AGG - chr4_2:65404830-65404849 None:intergenic 55.0%
CCTGAGGTTACAACTGGTGC+AGG + chr4_2:65404827-65404846 Msa0615850:CDS 55.0%
GAGGTTACAACTGGTGCAGG+TGG + chr4_2:65404830-65404849 Msa0615850:CDS 55.0%
TTTCCTTAACCAGTGCCCCG+GGG - chr4_2:65405107-65405126 None:intergenic 55.0%
GTTTCCTTAACCAGTGCCCC+GGG - chr4_2:65405108-65405127 None:intergenic 55.0%
GGTTTCCTTAACCAGTGCCC+CGG - chr4_2:65405109-65405128 None:intergenic 55.0%
GGGACTGCTACTGGAGTTGA+AGG - chr4_2:65405604-65405623 None:intergenic 55.0%
TTCCTTCTCTCGAGGCGGTC+CGG + chr4_2:65403474-65403493 Msa0615850:CDS 60.0%
TGGGGTGGATGAAGCCAAGC+AGG + chr4_2:65403602-65403621 Msa0615850:CDS 60.0%
GTTCCTCGAGGTCAAGCTCG+GGG + chr4_2:65404689-65404708 Msa0615850:CDS 60.0%
TTCCTTAACCAGTGCCCCGG+GGG - chr4_2:65405106-65405125 None:intergenic 60.0%
TCGAGGCGGTCCGGTGGAAT+GGG + chr4_2:65403483-65403502 Msa0615850:CDS 65.0%
TCCGGTGGAATGGGAGGTCC+CGG + chr4_2:65403492-65403511 Msa0615850:CDS 65.0%
ACCGGGACCTCCCATTCCAC+CGG - chr4_2:65403496-65403515 None:intergenic 65.0%
CTGGTCGGCGAGGAAGGACA+GGG + chr4_2:65404328-65404347 Msa0615850:CDS 65.0%
AGACCCCGAGCTTGACCTCG+AGG - chr4_2:65404695-65404714 None:intergenic 65.0%
CACCGGACCGCCTCGAGAGA+AGG - chr4_2:65403479-65403498 None:intergenic 70.0%
CTTCTCTCGAGGCGGTCCGG+TGG + chr4_2:65403477-65403496 Msa0615850:CDS 70.0%
CTCGAGGCGGTCCGGTGGAA+TGG + chr4_2:65403482-65403501 Msa0615850:CDS 70.0%
AGGCGGTCCGGTGGAATGGG+AGG + chr4_2:65403486-65403505 Msa0615850:CDS 70.0%
GGTGGAATGGGAGGTCCCGG+TGG + chr4_2:65403495-65403514 Msa0615850:CDS 70.0%
ATGGGAGGTCCCGGTGGACC+TGG + chr4_2:65403501-65403520 Msa0615850:CDS 70.0%
GCTGGTCGGCGAGGAAGGAC+AGG + chr4_2:65404327-65404346 Msa0615850:CDS 70.0%
AACTACTGCCCCCGGGGCAC+TGG + chr4_2:65405095-65405114 Msa0615850:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG + chr4_2:65405101-65405120 Msa0615850:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 65402413 65405818 65402413 ID=Msa0615850;Name=Msa0615850
chr4_2 mRNA 65402413 65405818 65402413 ID=Msa0615850-mRNA-1;Parent=Msa0615850;Name=Msa0615850-mRNA-1;_AED=0.06;_eAED=0.06;_QI=179|1|1|1|0.6|0.5|6|165|694
chr4_2 exon 65402413 65402591 65402413 ID=Msa0615850-mRNA-1:exon:18497;Parent=Msa0615850-mRNA-1
chr4_2 exon 65402898 65404085 65402898 ID=Msa0615850-mRNA-1:exon:18498;Parent=Msa0615850-mRNA-1
chr4_2 exon 65404162 65404475 65404162 ID=Msa0615850-mRNA-1:exon:18499;Parent=Msa0615850-mRNA-1
chr4_2 exon 65404646 65404886 65404646 ID=Msa0615850-mRNA-1:exon:18500;Parent=Msa0615850-mRNA-1
chr4_2 exon 65405289 65405635 65405289 ID=Msa0615850-mRNA-1:exon:18501;Parent=Msa0615850-mRNA-1
chr4_2 exon 65405659 65405818 65405659 ID=Msa0615850-mRNA-1:exon:18502;Parent=Msa0615850-mRNA-1
chr4_2 five_prime_UTR 65402413 65402591 65402413 ID=Msa0615850-mRNA-1:five_prime_utr;Parent=Msa0615850-mRNA-1
chr4_2 CDS 65402898 65404085 65402898 ID=Msa0615850-mRNA-1:cds;Parent=Msa0615850-mRNA-1
chr4_2 CDS 65404162 65404475 65404162 ID=Msa0615850-mRNA-1:cds;Parent=Msa0615850-mRNA-1
chr4_2 CDS 65404646 65404886 65404646 ID=Msa0615850-mRNA-1:cds;Parent=Msa0615850-mRNA-1
chr4_2 CDS 65405289 65405630 65405289 ID=Msa0615850-mRNA-1:cds;Parent=Msa0615850-mRNA-1
chr4_2 three_prime_UTR 65405631 65405635 65405631 ID=Msa0615850-mRNA-1:three_prime_utr;Parent=Msa0615850-mRNA-1
chr4_2 three_prime_UTR 65405659 65405818 65405659 ID=Msa0615850-mRNA-1:three_prime_utr;Parent=Msa0615850-mRNA-1
Gene Sequence

>Msa0615850

ATGGCAGCATCATCAGCATGTCTTGTTGGTAATGCTTTATCCACAAACAGTAATAGGACTACTCTTAGTAAGGATTTGAATGGAAGATATCTCTTTTCATCATGGAGATTTTCATCATTCAATAATAAGGCATCAAAATCATTTTCCATAAAAGCATCCTTGGAACAAAATCAGCAGGAAGGAAGAAGGGGGATTCTAAAATTGTTGCTTGGAAATGTCGGTGTTGGTTTGCCGGCATTATTGGGAAATGGAAAAGCTTATGCTGCTGATGAACAAGGGTCGTCCTCCAGAATGTCGTATTCGAGGTTTCTTGAGTATTTGGATAAGGATAGAGTTACCAAAGTTGATCTATATGAGAATGGAACCATAGCTATTGTTGAGGCTGTGTCTCCTGAATTGGGAAATAGGTTGCAGCGTGTTCGAGTTCAACTTCCTGGACTTAGCCAAGAGCTTCTTCAGAAATTCAGGGAAAAGAACATTGACTTTGCAGCTCATAATGCTCAAGAAGATTCGGGTTCTCTTTTGTTTAATCTCATTGGGAATCTTGCTTTCCCTGCTGCTGTCATTGGTGTATTGTTCCTTCTCTCGAGGCGGTCCGGTGGAATGGGAGGTCCCGGTGGACCTGGATTTCCTATGCAATTCGGTCAATCTAAAGCCAAGTTTCAAATGGAACCAAACACTGGAGTGACTTTTGATGATGTTGCTGGGGTGGATGAAGCCAAGCAGGATTTTATGGAGGTGGTTGAATTTCTCAAGAAGCCTGAGAGGTTCACTTCTGTTGGTGCTCGCATTCCAAAAGGAGTTCTTCTTGTTGGTCCTCCAGGAACCGGAAAGACTTTGTTGGCCAAGGCTATTGCTGGTGAAGCGGGTGTTCCGTTTTTCTCTATATCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTATTGGTGCTTCTCGTGTCCGTGATTTGTTCAAGAAAGCTAAAGAGAATGCTCCTTGCATTGTCTTTGTTGATGAAATTGACGCTGTTGGAAGACAAAGAGGGACAGGAATTGGTGGAGGGAATGACGAAAGAGAACAGACCCTCAACCAACTTTTGACAGAAATGGACGGATTTGAGGGTAATACCGGTGTCATTGTTGTTGCTGCAACTAACAGGGCCGACATTCTTGACTCTGCGTTATTGAGACCAGGCCGATTCGATAGACAGGTATCGGTTGATGTTCCAGATGTAAGGGGAAGGACCGAAATCCTAAAGGTTCATGCTAACAATAAAAAATTTGATAATGATGTTTCTCTTGAAGTGATTGCAATGAGAACACCTGGTTTCAGCGGAGCTGATCTTGCAAATCTATTGAATGAAGCTGCTATATTAGCTGGTCGGCGAGGAAGGACAGGGATTTCACCTAAAGAGATTGACGATTCTATTGATAGGATTGTTGCTGGAATGGAAGGAACATTAATGACCGATGGGAAGAGCAAAAGTTTAGTGGCATATCATGAAGTTGGTCATGCCATTTGTGGAACTTTGACTCCTGGTCATGATGCGGTACAAAAGGTGACATTAGTTCCTCGAGGTCAAGCTCGGGGTCTTACATGGTTCATTCCTTCCGATGACCCAACTCTGATCTCAAAACAACAACTCTTTGCAAGAATTGTTGGAGGATTAGGTGGTAGGGCAGCAGAAGAAATTATTTTTGGTGAGCCTGAGGTTACAACTGGTGCAGGTGGTGATTTGCAGCAAATCACCGGTATAGCAAGACAGATGGTAGTCACATTTGGAATGTCTGATATTGGTCCTTGGTCACTTATGGACTCGTCAGCACAAAGTGGCGATGTTATCATGAGAATGATGGCAAGGAACTCAATGTCAGAAAAGCTTGCAGAAGACATTGATACCGCTGTCAAGAGATTGTCAGATGAAGCATATGAAATTGCATTGACACAGATAAGGAACAACCGTGAGGCAATTGATAAGATTGTGGAAGTCCTTCTGGAGAAGGAGACATTGAGTGGAGATGAATTCCGCGCTCTACTGTCAGAGTTTACTGAAATTCCAGTTGAAAATCGGGTTCCTCCTTCAACTCCAGTAGCAGTCCCTGTTTGA
Protein sequence

>Msa0615850

MAASSACLVGNALSTNSNRTTLSKDLNGRYLFSSWRFSSFNNKASKSFSIKASLEQNQQEGRRGILKLLLGNVGVGLPALLGNGKAYAADEQGSSSRMSYSRFLEYLDKDRVTKVDLYENGTIAIVEAVSPELGNRLQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPAAVIGVLFLLSRRSGGMGGPGGPGFPMQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTSVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGIGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHANNKKFDNDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTGISPKEIDDSIDRIVAGMEGTLMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGEPEVTTGAGGDLQQITGIARQMVVTFGMSDIGPWSLMDSSAQSGDVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALTQIRNNREAIDKIVEVLLEKETLSGDEFRALLSEFTEIPVENRVPPSTPVAVPV*