Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281370 | XP_013463254.1 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 4.28e-54 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281370 | sp|Q3E902|RS212_ARATH | 85.185 | 81 | 12 | 0 | 1 | 81 | 1 | 81 | 9.26e-50 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281370 | B7FGU9 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 2.04e-54 | 172 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0281370 | 0.865043 | 7.860885e-65 | -8.615850e-47 |
| Msa0002430 | Msa0281370 | 0.800863 | 1.180171e-48 | -8.615850e-47 |
| Msa0003330 | Msa0281370 | 0.847677 | 9.937074e-60 | -8.615850e-47 |
| Msa0027590 | Msa0281370 | 0.893565 | 5.586558e-75 | -8.615850e-47 |
| Msa0027610 | Msa0281370 | -0.833984 | 3.895704e-56 | -8.615850e-47 |
| Msa0037230 | Msa0281370 | 0.823647 | 1.237580e-53 | -8.615850e-47 |
| Msa0040220 | Msa0281370 | 0.810196 | 1.299857e-50 | -8.615850e-47 |
| Msa0044010 | Msa0281370 | 0.875403 | 3.167016e-68 | -8.615850e-47 |
| Msa0071640 | Msa0281370 | 0.834160 | 3.519814e-56 | -8.615850e-47 |
| Msa0071760 | Msa0281370 | 0.804171 | 2.455470e-49 | -8.615850e-47 |
| Msa0072570 | Msa0281370 | 0.890821 | 6.961658e-74 | -8.615850e-47 |
| Msa0075350 | Msa0281370 | 0.848728 | 5.094475e-60 | -8.615850e-47 |
| Msa0075370 | Msa0281370 | -0.825464 | 4.621953e-54 | -8.615850e-47 |
| Msa0076630 | Msa0281370 | 0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0077320 | Msa0281370 | 0.827973 | 1.163491e-54 | -8.615850e-47 |
| Msa0087910 | Msa0281370 | 0.830059 | 3.634443e-55 | -8.615850e-47 |
| Msa0089540 | Msa0281370 | 0.841625 | 4.243229e-58 | -8.615850e-47 |
| Msa0090580 | Msa0281370 | 0.805331 | 1.405770e-49 | -8.615850e-47 |
| Msa0099090 | Msa0281370 | -0.826428 | 2.727786e-54 | -8.615850e-47 |
| Msa0114570 | Msa0281370 | 0.870412 | 1.488220e-66 | -8.615850e-47 |
| Msa0114600 | Msa0281370 | 0.886719 | 2.676519e-72 | -8.615850e-47 |
| Msa0123290 | Msa0281370 | 0.800153 | 1.647050e-48 | -8.615850e-47 |
| Msa0123310 | Msa0281370 | -0.845771 | 3.299166e-59 | -8.615850e-47 |
| Msa0128330 | Msa0281370 | 0.816483 | 5.402437e-52 | -8.615850e-47 |
| Msa0132460 | Msa0281370 | 0.823294 | 1.496352e-53 | -8.615850e-47 |
| Msa0134580 | Msa0281370 | 0.837465 | 5.117029e-57 | -8.615850e-47 |
| Msa0146610 | Msa0281370 | 0.809701 | 1.661304e-50 | -8.615850e-47 |
| Msa0167800 | Msa0281370 | -0.821989 | 3.010176e-53 | -8.615850e-47 |
| Msa0167860 | Msa0281370 | 0.915124 | 8.541979e-85 | -8.615850e-47 |
| Msa0168320 | Msa0281370 | 0.818030 | 2.424667e-52 | -8.615850e-47 |
| Msa0169710 | Msa0281370 | 0.852486 | 4.472883e-61 | -8.615850e-47 |
| Msa0172930 | Msa0281370 | 0.828208 | 1.021752e-54 | -8.615850e-47 |
| Msa0174580 | Msa0281370 | 0.807049 | 6.111856e-50 | -8.615850e-47 |
| Msa0182050 | Msa0281370 | 0.821923 | 3.118959e-53 | -8.615850e-47 |
| Msa0182100 | Msa0281370 | 0.815854 | 7.469957e-52 | -8.615850e-47 |
| Msa0183840 | Msa0281370 | 0.893440 | 6.274663e-75 | -8.615850e-47 |
| Msa0186740 | Msa0281370 | 0.822196 | 2.695677e-53 | -8.615850e-47 |
| Msa0187810 | Msa0281370 | 0.861849 | 7.683253e-64 | -8.615850e-47 |
| Msa0188740 | Msa0281370 | 0.818511 | 1.886870e-52 | -8.615850e-47 |
| Msa0191450 | Msa0281370 | 0.879353 | 1.335738e-69 | -8.615850e-47 |
| Msa0191550 | Msa0281370 | 0.891835 | 2.762026e-74 | -8.615850e-47 |
| Msa0192300 | Msa0281370 | 0.861712 | 8.463348e-64 | -8.615850e-47 |
| Msa0192750 | Msa0281370 | 0.817753 | 2.800458e-52 | -8.615850e-47 |
| Msa0194940 | Msa0281370 | 0.874622 | 5.847051e-68 | -8.615850e-47 |
| Msa0195030 | Msa0281370 | 0.885304 | 9.127593e-72 | -8.615850e-47 |
| Msa0229150 | Msa0281370 | 0.822932 | 1.818272e-53 | -8.615850e-47 |
| Msa0233550 | Msa0281370 | 0.823886 | 1.087711e-53 | -8.615850e-47 |
| Msa0235050 | Msa0281370 | 0.859184 | 4.929968e-63 | -8.615850e-47 |
| Msa0237180 | Msa0281370 | 0.875699 | 2.507553e-68 | -8.615850e-47 |
| Msa0239420 | Msa0281370 | 0.917153 | 7.508455e-86 | -8.615850e-47 |
| Msa0270160 | Msa0281370 | 0.818571 | 1.828243e-52 | -8.615850e-47 |
| Msa0274940 | Msa0281370 | 0.852528 | 4.352510e-61 | -8.615850e-47 |
| Msa0277600 | Msa0281370 | 0.848077 | 7.713101e-60 | -8.615850e-47 |
| Msa0281330 | Msa0281370 | 0.966104 | 1.774601e-125 | -8.615850e-47 |
| Msa0281370 | Msa0301250 | 0.854572 | 1.125929e-61 | -8.615850e-47 |
| Msa0281370 | Msa0312210 | 0.836002 | 1.207459e-56 | -8.615850e-47 |
| Msa0281370 | Msa0313060 | 0.888150 | 7.617882e-73 | -8.615850e-47 |
| Msa0281370 | Msa0315430 | 0.886611 | 2.941611e-72 | -8.615850e-47 |
| Msa0281370 | Msa0315660 | 0.877120 | 8.107628e-69 | -8.615850e-47 |
| Msa0281370 | Msa0340560 | 0.845772 | 3.296302e-59 | -8.615850e-47 |
| Msa0281370 | Msa0369410 | 0.812262 | 4.632807e-51 | -8.615850e-47 |
| Msa0281370 | Msa0371490 | 0.860757 | 1.653295e-63 | -8.615850e-47 |
| Msa0281370 | Msa0376830 | 0.831396 | 1.708978e-55 | -8.615850e-47 |
| Msa0281370 | Msa0376850 | 0.843898 | 1.055596e-58 | -8.615850e-47 |
| Msa0281370 | Msa0377370 | 0.854048 | 1.595440e-61 | -8.615850e-47 |
| Msa0281370 | Msa0377520 | 0.878066 | 3.793490e-69 | -8.615850e-47 |
| Msa0281370 | Msa0378620 | -0.825233 | 5.242188e-54 | -8.615850e-47 |
| Msa0281370 | Msa0382670 | 0.821061 | 4.931282e-53 | -8.615850e-47 |
| Msa0281370 | Msa0382960 | 0.810816 | 9.551213e-51 | -8.615850e-47 |
| Msa0281370 | Msa0388520 | 0.806817 | 6.841997e-50 | -8.615850e-47 |
| Msa0281370 | Msa0412480 | -0.805636 | 1.213384e-49 | -8.615850e-47 |
| Msa0281370 | Msa0416470 | 0.821901 | 3.154768e-53 | -8.615850e-47 |
| Msa0281370 | Msa0419710 | 0.839169 | 1.861258e-57 | -8.615850e-47 |
| Msa0281370 | Msa0426090 | 0.871998 | 4.457670e-67 | -8.615850e-47 |
| Msa0281370 | Msa0426250 | 0.863436 | 2.493251e-64 | -8.615850e-47 |
| Msa0281370 | Msa0432260 | -0.841248 | 5.331652e-58 | -8.615850e-47 |
| Msa0281370 | Msa0450150 | 0.847356 | 1.217697e-59 | -8.615850e-47 |
| Msa0281370 | Msa0472480 | 0.868527 | 6.113445e-66 | -8.615850e-47 |
| Msa0281370 | Msa0476730 | -0.814594 | 1.422863e-51 | -8.615850e-47 |
| Msa0281370 | Msa0481520 | 0.836621 | 8.406930e-57 | -8.615850e-47 |
| Msa0281370 | Msa0511760 | 0.824085 | 9.768560e-54 | -8.615850e-47 |
| Msa0281370 | Msa0516830 | 0.844039 | 9.675849e-59 | -8.615850e-47 |
| Msa0281370 | Msa0517480 | 0.871406 | 7.004417e-67 | -8.615850e-47 |
| Msa0281370 | Msa0526490 | -0.836725 | 7.906661e-57 | -8.615850e-47 |
| Msa0281370 | Msa0529900 | 0.813148 | 2.963509e-51 | -8.615850e-47 |
| Msa0281370 | Msa0540480 | 0.811923 | 5.491799e-51 | -8.615850e-47 |
| Msa0281370 | Msa0547920 | 0.891730 | 3.043045e-74 | -8.615850e-47 |
| Msa0281370 | Msa0550420 | 0.878454 | 2.773095e-69 | -8.615850e-47 |
| Msa0281370 | Msa0550490 | 0.850963 | 1.208231e-60 | -8.615850e-47 |
| Msa0281370 | Msa0573550 | 0.910053 | 2.877516e-82 | -8.615850e-47 |
| Msa0281370 | Msa0574780 | 0.838842 | 2.260888e-57 | -8.615850e-47 |
| Msa0281370 | Msa0579830 | 0.814699 | 1.349016e-51 | -8.615850e-47 |
| Msa0281370 | Msa0582070 | 0.831337 | 1.767259e-55 | -8.615850e-47 |
| Msa0281370 | Msa0597240 | 0.849973 | 2.291626e-60 | -8.615850e-47 |
| Msa0281370 | Msa0602900 | 0.880008 | 7.817665e-70 | -8.615850e-47 |
| Msa0281370 | Msa0605890 | 0.901755 | 1.943884e-78 | -8.615850e-47 |
| Msa0281370 | Msa0619230 | 0.874554 | 6.166592e-68 | -8.615850e-47 |
| Msa0281370 | Msa0622230 | 0.863195 | 2.959737e-64 | -8.615850e-47 |
| Msa0281370 | Msa0643960 | 0.887422 | 1.446871e-72 | -8.615850e-47 |
| Msa0281370 | Msa0649890 | 0.815201 | 1.043626e-51 | -8.615850e-47 |
| Msa0281370 | Msa0653060 | 0.818257 | 2.154633e-52 | -8.615850e-47 |
| Msa0281370 | Msa0681220 | 0.827957 | 1.174133e-54 | -8.615850e-47 |
| Msa0281370 | Msa0686550 | 0.880028 | 7.689485e-70 | -8.615850e-47 |
| Msa0281370 | Msa0686660 | 0.823424 | 1.395473e-53 | -8.615850e-47 |
| Msa0281370 | Msa0694400 | 0.836274 | 1.029870e-56 | -8.615850e-47 |
| Msa0281370 | Msa0700410 | 0.828725 | 7.662620e-55 | -8.615850e-47 |
| Msa0281370 | Msa0704860 | 0.858801 | 6.418930e-63 | -8.615850e-47 |
| Msa0281370 | Msa0705800 | 0.835494 | 1.624638e-56 | -8.615850e-47 |
| Msa0281370 | Msa0708630 | 0.823724 | 1.187366e-53 | -8.615850e-47 |
| Msa0281370 | Msa0748350 | 0.861163 | 1.244742e-63 | -8.615850e-47 |
| Msa0281370 | Msa0788380 | 0.868457 | 6.436494e-66 | -8.615850e-47 |
| Msa0281370 | Msa0790450 | 0.860038 | 2.728920e-63 | -8.615850e-47 |
| Msa0281370 | Msa0796490 | 0.804967 | 1.675313e-49 | -8.615850e-47 |
| Msa0281370 | Msa0822580 | 0.830613 | 2.660818e-55 | -8.615850e-47 |
| Msa0281370 | Msa0834220 | 0.825328 | 4.975906e-54 | -8.615850e-47 |
| Msa0281370 | Msa0838070 | 0.806908 | 6.546558e-50 | -8.615850e-47 |
| Msa0281370 | Msa0880050 | 0.801452 | 8.946154e-49 | -8.615850e-47 |
| Msa0281370 | Msa0902220 | 0.847504 | 1.109326e-59 | -8.615850e-47 |
| Msa0281370 | Msa0927910 | 0.854945 | 8.778966e-62 | -8.615850e-47 |
| Msa0281370 | Msa0929680 | 0.836528 | 8.874611e-57 | -8.615850e-47 |
| Msa0281370 | Msa0929700 | 0.917754 | 3.611432e-86 | -8.615850e-47 |
| Msa0281370 | Msa0930100 | 0.816928 | 4.294466e-52 | -8.615850e-47 |
| Msa0281370 | Msa0930790 | 0.811828 | 5.758161e-51 | -8.615850e-47 |
| Msa0281370 | Msa0930890 | 0.846848 | 1.678757e-59 | -8.615850e-47 |
| Msa0281370 | Msa1014550 | -0.800336 | 1.511531e-48 | -8.615850e-47 |
| Msa0281370 | Msa1019110 | 0.811550 | 6.619526e-51 | -8.615850e-47 |
| Msa0281370 | Msa1025200 | 0.818598 | 1.803054e-52 | -8.615850e-47 |
| Msa0281370 | Msa1025220 | 0.817753 | 2.800377e-52 | -8.615850e-47 |
| Msa0281370 | Msa1037290 | 0.822901 | 1.848001e-53 | -8.615850e-47 |
| Msa0281370 | Msa1040160 | 0.856626 | 2.833067e-62 | -8.615850e-47 |
| Msa0281370 | Msa1041680 | 0.845244 | 4.582379e-59 | -8.615850e-47 |
| Msa0281370 | Msa1047020 | 0.802386 | 5.749745e-49 | -8.615850e-47 |
| Msa0281370 | Msa1050100 | 0.825171 | 5.421560e-54 | -8.615850e-47 |
| Msa0281370 | Msa1054280 | 0.833572 | 4.938988e-56 | -8.615850e-47 |
| Msa0281370 | Msa1082050 | 0.802774 | 4.782479e-49 | -8.615850e-47 |
| Msa0281370 | Msa1082170 | 0.830383 | 3.029691e-55 | -8.615850e-47 |
| Msa0281370 | Msa1083370 | 0.839691 | 1.361635e-57 | -8.615850e-47 |
| Msa0281370 | Msa1085850 | 0.808896 | 2.471925e-50 | -8.615850e-47 |
| Msa0281370 | Msa1116940 | 0.837729 | 4.376366e-57 | -8.615850e-47 |
| Msa0281370 | Msa1126520 | 0.809765 | 1.609308e-50 | -8.615850e-47 |
| Msa0281370 | Msa1126690 | 0.840424 | 8.767304e-58 | -8.615850e-47 |
| Msa0281370 | Msa1131030 | 0.873805 | 1.106054e-67 | -8.615850e-47 |
| Msa0281370 | Msa1136880 | 0.808908 | 2.458160e-50 | -8.615850e-47 |
| Msa0281370 | Msa1147670 | 0.865574 | 5.348848e-65 | -8.615850e-47 |
| Msa0281370 | Msa1156830 | 0.845097 | 5.022546e-59 | -8.615850e-47 |
| Msa0281370 | Msa1163320 | 0.806973 | 6.341060e-50 | -8.615850e-47 |
| Msa0281370 | Msa1164150 | 0.842579 | 2.372108e-58 | -8.615850e-47 |
| Msa0281370 | Msa1165640 | 0.859572 | 3.770263e-63 | -8.615850e-47 |
| Msa0281370 | Msa1166570 | 0.835721 | 1.422553e-56 | -8.615850e-47 |
| Msa0281370 | Msa1166670 | 0.804158 | 2.470335e-49 | -8.615850e-47 |
| Msa0281370 | Msa1167360 | 0.803285 | 3.749141e-49 | -8.615850e-47 |
| Msa0281370 | Msa1180000 | 0.820260 | 7.533405e-53 | -8.615850e-47 |
| Msa0281370 | Msa1186030 | 0.892295 | 1.810791e-74 | -8.615850e-47 |
| Msa0281370 | Msa1206240 | 0.838040 | 3.641132e-57 | -8.615850e-47 |
| Msa0281370 | Msa1218170 | 0.810049 | 1.398461e-50 | -8.615850e-47 |
| Msa0281370 | Msa1235950 | 0.862890 | 3.676429e-64 | -8.615850e-47 |
| Msa0281370 | Msa1235980 | 0.864955 | 8.377974e-65 | -8.615850e-47 |
| Msa0281370 | Msa1237040 | 0.865864 | 4.334488e-65 | -8.615850e-47 |
| Msa0281370 | Msa1240270 | 0.851972 | 6.262791e-61 | -8.615850e-47 |
| Msa0281370 | Msa1258540 | 0.832899 | 7.263733e-56 | -8.615850e-47 |
| Msa0281370 | Msa1270640 | 0.812715 | 3.687646e-51 | -8.615850e-47 |
| Msa0281370 | Msa1270710 | 0.806911 | 6.534526e-50 | -8.615850e-47 |
| Msa0281370 | Msa1278130 | 0.832695 | 8.162696e-56 | -8.615850e-47 |
| Msa0281370 | Msa1311400 | 0.827836 | 1.255409e-54 | -8.615850e-47 |
| Msa0281370 | Msa1316100 | 0.829692 | 4.464088e-55 | -8.615850e-47 |
| Msa0281370 | Msa1317390 | 0.845316 | 4.381977e-59 | -8.615850e-47 |
| Msa0281370 | Msa1330730 | 0.851355 | 9.366932e-61 | -8.615850e-47 |
| Msa0281370 | Msa1341780 | 0.826487 | 2.640604e-54 | -8.615850e-47 |
| Msa0281370 | Msa1344190 | 0.800374 | 1.485430e-48 | -8.615850e-47 |
| Msa0281370 | Msa1351020 | 0.892838 | 1.097185e-74 | -8.615850e-47 |
| Msa0281370 | Msa1351910 | 0.835628 | 1.501980e-56 | -8.615850e-47 |
| Msa0281370 | Msa1363910 | 0.818908 | 1.533524e-52 | -8.615850e-47 |
| Msa0281370 | Msa1364110 | 0.813279 | 2.773664e-51 | -8.615850e-47 |
| Msa0281370 | Msa1367540 | 0.809919 | 1.491360e-50 | -8.615850e-47 |
| Msa0281370 | Msa1368920 | 0.826915 | 2.086857e-54 | -8.615850e-47 |
| Msa0281370 | Msa1385480 | 0.820600 | 6.294726e-53 | -8.615850e-47 |
| Msa0281370 | Msa1390760 | 0.875273 | 3.507617e-68 | -8.615850e-47 |
| Msa0281370 | Msa1397660 | 0.860150 | 2.524340e-63 | -8.615850e-47 |
| Msa0281370 | Msa1407550 | 0.830536 | 2.778555e-55 | -8.615850e-47 |
| Msa0281370 | Msa1418770 | 0.807940 | 3.953398e-50 | -8.615850e-47 |
| Msa0281370 | Msa1421510 | 0.804771 | 1.840516e-49 | -8.615850e-47 |
| Msa0281370 | Msa1424570 | 0.811812 | 5.805612e-51 | -8.615850e-47 |
| Msa0281370 | Msa1425070 | 0.874386 | 7.036066e-68 | -8.615850e-47 |
| Msa0281370 | Msa1432310 | 0.829784 | 4.239868e-55 | -8.615850e-47 |
| Msa0281370 | Msa1441220 | -0.825558 | 4.391350e-54 | -8.615850e-47 |
| Msa0281370 | Msa1446410 | 0.881897 | 1.637926e-70 | -8.615850e-47 |
| Msa0281370 | Msa1448840 | -0.814768 | 1.302181e-51 | -8.615850e-47 |
| Msa0281370 | Msa1449160 | 0.832575 | 8.740131e-56 | -8.615850e-47 |
| Msa0281370 | Msa1450560 | 0.859991 | 2.818718e-63 | -8.615850e-47 |
| Msa0281370 | Msa1453530 | 0.814992 | 1.161350e-51 | -8.615850e-47 |
| Msa0281370 | Msa1463570 | 0.811318 | 7.432880e-51 | -8.615850e-47 |
| Msa0281370 | Msa1465700 | 0.874596 | 5.969323e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281370 | MtrunA17_Chr2g0295971 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 3.94e-58 | 172 |
| Msa0281370 | MtrunA17_Chr7g0246911 | 93.827 | 81 | 5 | 0 | 1 | 81 | 26 | 106 | 2.70e-55 | 166 |
| Msa0281370 | MtrunA17_Chr4g0001451 | 68.627 | 51 | 14 | 2 | 6 | 54 | 18 | 68 | 4.35e-16 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281370 | AT5G27700.1 | 85.185 | 81 | 12 | 0 | 1 | 81 | 1 | 81 | 9.41e-51 | 154 |
| Msa0281370 | AT3G53890.2 | 80.247 | 81 | 16 | 0 | 1 | 81 | 1 | 81 | 1.68e-48 | 148 |
| Msa0281370 | AT3G53890.1 | 80.247 | 81 | 16 | 0 | 1 | 81 | 1 | 81 | 1.68e-48 | 148 |
Find 30 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCGTTCTGCATCTTT+AGG | 0.132539 | 2_3:-16761835 | None:intergenic |
| TTCTTCGTTCTGCATCTTTA+GGG | 0.265310 | 2_3:-16761834 | None:intergenic |
| TACCAAATGAATTTCAAAAT+AGG | 0.353340 | 2_3:-16763676 | None:intergenic |
| TCAGCTGAACATAGGTCATT+TGG | 0.363523 | 2_3:+16762030 | Msa0281370:CDS |
| CTGTTTGCATCTCTCTCATC+TGG | 0.389759 | 2_3:+16761660 | Msa0281370:five_prime_UTR |
| GTTTCAGTTCTGCTACAAAC+AGG | 0.431981 | 2_3:+16761978 | Msa0281370:intron |
| TGAAGCACTTAAGCAAACTT+AGG | 0.448126 | 2_3:-16763714 | None:intergenic |
| CTGTGGCTTCACCCGTGCTC+AGG | 0.453938 | 2_3:+16762096 | Msa0281370:CDS |
| AAAAGTTCATACCACTTCCT+AGG | 0.458041 | 2_3:-16761881 | None:intergenic |
| TCACCGAGCTCTACATTCCT+AGG | 0.480407 | 2_3:+16761864 | Msa0281370:CDS |
| GAAGCCACAGAGAGCAAAAG+TGG | 0.501571 | 2_3:-16762083 | None:intergenic |
| TGCAAACAGACGCAAAGCAG+AGG | 0.502010 | 2_3:-16761646 | None:intergenic |
| CTAAAGATGCAGAACGAAGA+AGG | 0.519629 | 2_3:+16761836 | Msa0281370:exon |
| ACAGTGGAATTGATCGCCTA+TGG | 0.527769 | 2_3:+16763527 | Msa0281370:CDS |
| AGCTCTACATTCCTAGGAAG+TGG | 0.545691 | 2_3:+16761870 | Msa0281370:CDS |
| TCAAAGGATGGATACGCAGA+AGG | 0.547072 | 2_3:-16763801 | None:intergenic |
| TTGTGTCTACTGCTTAAGCT+CGG | 0.551699 | 2_3:-16763563 | None:intergenic |
| ACGCAGAAGGGCAAAGCAGT+TGG | 0.555115 | 2_3:-16763788 | None:intergenic |
| AAACAGGCTTATTACTGCTA+AGG | 0.565079 | 2_3:+16761994 | Msa0281370:CDS |
| GCATCAGTTCAGCTGAACAT+AGG | 0.573016 | 2_3:+16762022 | Msa0281370:CDS |
| AAATAGGCATCGCATTACAT+AGG | 0.576390 | 2_3:-16763660 | None:intergenic |
| GCAAACAGACGCAAAGCAGA+GGG | 0.591865 | 2_3:-16761645 | None:intergenic |
| CAAAGGATGGATACGCAGAA+GGG | 0.593850 | 2_3:-16763800 | None:intergenic |
| GATGAGAGCGGTGTTTACAA+TGG | 0.604206 | 2_3:+16762052 | Msa0281370:CDS |
| ACAAATGGATACCTGAGCAC+GGG | 0.612936 | 2_3:-16762107 | None:intergenic |
| AACAGACGCAAAGCAGAGGG+AGG | 0.626207 | 2_3:-16761642 | None:intergenic |
| TTTCAGGGAGATGCTGACAG+TGG | 0.628229 | 2_3:+16763511 | Msa0281370:intron |
| CTTCCTAGGAATGTAGAGCT+CGG | 0.633169 | 2_3:-16761867 | None:intergenic |
| AACAAATGGATACCTGAGCA+CGG | 0.637714 | 2_3:-16762108 | None:intergenic |
| ATAGGTCATTTGGATGAGAG+CGG | 0.690184 | 2_3:+16762040 | Msa0281370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAGAAATTATGTTATAT+TGG | - | chr2_3:16762517-16762536 | None:intergenic | 10.0% |
| !!! | AAAATAAGTTTTTAATAAAC+AGG | - | chr2_3:16762882-16762901 | None:intergenic | 10.0% |
| !!! | TGTTTATTAAAAACTTATTT+TGG | + | chr2_3:16762881-16762900 | Msa0281370:intron | 10.0% |
| !!! | GTTTATTAAAAACTTATTTT+GGG | + | chr2_3:16762882-16762901 | Msa0281370:intron | 10.0% |
| !! | TTTAAGAAATTATGTTATAT+TGG | - | chr2_3:16762517-16762536 | None:intergenic | 10.0% |
| !!! | AAAATAAGTTTTTAATAAAC+AGG | - | chr2_3:16762882-16762901 | None:intergenic | 10.0% |
| !!! | TGTTTATTAAAAACTTATTT+TGG | + | chr2_3:16762881-16762900 | Msa0281370:intron | 10.0% |
| !!! | GTTTATTAAAAACTTATTTT+GGG | + | chr2_3:16762882-16762901 | Msa0281370:intron | 10.0% |
| !! | TGAATTAAGAGTAAATAATT+AGG | + | chr2_3:16762177-16762196 | Msa0281370:intron | 15.0% |
| !! | GAATTAAGAGTAAATAATTA+GGG | + | chr2_3:16762178-16762197 | Msa0281370:intron | 15.0% |
| !! | TTTCATAAGCTAAAAAAATA+AGG | + | chr2_3:16762562-16762581 | Msa0281370:intron | 15.0% |
| !! | TGATTCTATATATCTTATAT+TGG | + | chr2_3:16762787-16762806 | Msa0281370:intron | 15.0% |
| !! | TATACCAATATATCTTATAT+TGG | + | chr2_3:16762846-16762865 | Msa0281370:intron | 15.0% |
| !! | TATACCAATATAAGATATAT+TGG | - | chr2_3:16762853-16762872 | None:intergenic | 15.0% |
| !! | TGAATTAAGAGTAAATAATT+AGG | + | chr2_3:16762177-16762196 | Msa0281370:intron | 15.0% |
| !! | GAATTAAGAGTAAATAATTA+GGG | + | chr2_3:16762178-16762197 | Msa0281370:intron | 15.0% |
| !! | TTTCATAAGCTAAAAAAATA+AGG | + | chr2_3:16762562-16762581 | Msa0281370:intron | 15.0% |
| !! | TGATTCTATATATCTTATAT+TGG | + | chr2_3:16762787-16762806 | Msa0281370:intron | 15.0% |
| !! | TATACCAATATATCTTATAT+TGG | + | chr2_3:16762846-16762865 | Msa0281370:intron | 15.0% |
| !! | TATACCAATATAAGATATAT+TGG | - | chr2_3:16762853-16762872 | None:intergenic | 15.0% |
| !! | TGATTTGAATTAAATCATGT+CGG | + | chr2_3:16762758-16762777 | Msa0281370:intron | 20.0% |
| !! | ACTTAAAATTTATACTTCCT+CGG | + | chr2_3:16762960-16762979 | Msa0281370:intron | 20.0% |
| !!! | TCCTTTTTATAAGAAACAAA+TGG | + | chr2_3:16762984-16763003 | Msa0281370:intron | 20.0% |
| !!! | ACCATTTGTTTCTTATAAAA+AGG | - | chr2_3:16762988-16763007 | None:intergenic | 20.0% |
| !! | TACTGATAATATGTAAACTT+AGG | - | chr2_3:16763126-16763145 | None:intergenic | 20.0% |
| !! | AAGTTTACATATTATCAGTA+TGG | + | chr2_3:16763126-16763145 | Msa0281370:intron | 20.0% |
| !! | TACCAAATGAATTTCAAAAT+AGG | - | chr2_3:16763679-16763698 | None:intergenic | 20.0% |
| !!! | AAATTCATTTGGTACTTTTA+AGG | + | chr2_3:16763685-16763704 | Msa0281370:three_prime_UTR | 20.0% |
| !! | CATCCTTTGATTAAAAAAAA+GGG | + | chr2_3:16763814-16763833 | Msa0281370:three_prime_UTR | 20.0% |
| !! | TGATTTGAATTAAATCATGT+CGG | + | chr2_3:16762758-16762777 | Msa0281370:intron | 20.0% |
| !! | ACTTAAAATTTATACTTCCT+CGG | + | chr2_3:16762960-16762979 | Msa0281370:intron | 20.0% |
| !!! | TCCTTTTTATAAGAAACAAA+TGG | + | chr2_3:16762984-16763003 | Msa0281370:intron | 20.0% |
| !!! | ACCATTTGTTTCTTATAAAA+AGG | - | chr2_3:16762988-16763007 | None:intergenic | 20.0% |
| !! | TACTGATAATATGTAAACTT+AGG | - | chr2_3:16763126-16763145 | None:intergenic | 20.0% |
| !! | AAGTTTACATATTATCAGTA+TGG | + | chr2_3:16763126-16763145 | Msa0281370:intron | 20.0% |
| !! | TACCAAATGAATTTCAAAAT+AGG | - | chr2_3:16763679-16763698 | None:intergenic | 20.0% |
| !!! | AAATTCATTTGGTACTTTTA+AGG | + | chr2_3:16763685-16763704 | Msa0281370:three_prime_UTR | 20.0% |
| ! | TTGTTGAAAAATCAATCACT+TGG | - | chr2_3:16761813-16761832 | None:intergenic | 25.0% |
| !!! | TTTGAACTGTTTTTGTTTTG+TGG | + | chr2_3:16761951-16761970 | Msa0281370:intron | 25.0% |
| !!! | GGTTTCTATCTTTGTTATTT+TGG | + | chr2_3:16762144-16762163 | Msa0281370:intron | 25.0% |
| ! | AGCTAAAAAAATAAGGCAAA+CGG | + | chr2_3:16762569-16762588 | Msa0281370:intron | 25.0% |
| !! | ACGAGTAGTTTTTAATAAAC+AGG | - | chr2_3:16762819-16762838 | None:intergenic | 25.0% |
| ! | CTTAAAATTTATACTTCCTC+GGG | + | chr2_3:16762961-16762980 | Msa0281370:intron | 25.0% |
| ! | AACCAAATACATCAACTTTA+TGG | + | chr2_3:16763042-16763061 | Msa0281370:intron | 25.0% |
| ! | ATAATATGTAAACTTAGGCA+AGG | - | chr2_3:16763121-16763140 | None:intergenic | 25.0% |
| ! | GAAAACCTTTATATCTATGT+TGG | + | chr2_3:16763419-16763438 | Msa0281370:intron | 25.0% |
| ! | TATGTCCAACATAGATATAA+AGG | - | chr2_3:16763427-16763446 | None:intergenic | 25.0% |
| !!! | TTGATGCTTGTTTTATTTTC+AGG | + | chr2_3:16763495-16763514 | Msa0281370:intron | 25.0% |
| !!! | TGATGCTTGTTTTATTTTCA+GGG | + | chr2_3:16763496-16763515 | Msa0281370:intron | 25.0% |
| !!! | TTGAGTTCAACTTTTGTTAT+TGG | + | chr2_3:16763627-16763646 | Msa0281370:three_prime_UTR | 25.0% |
| !!! | TGCCTATTTTGAAATTCATT+TGG | + | chr2_3:16763674-16763693 | Msa0281370:three_prime_UTR | 25.0% |
| !! | TGTTTTCTATAACATTTCAG+AGG | + | chr2_3:16763750-16763769 | Msa0281370:three_prime_UTR | 25.0% |
| !!! | CCTTTTTTTTAATCAAAGGA+TGG | - | chr2_3:16763816-16763835 | None:intergenic | 25.0% |
| ! | CCATCCTTTGATTAAAAAAA+AGG | + | chr2_3:16763813-16763832 | Msa0281370:three_prime_UTR | 25.0% |
| ! | TTGTTGAAAAATCAATCACT+TGG | - | chr2_3:16761813-16761832 | None:intergenic | 25.0% |
| !!! | TTTGAACTGTTTTTGTTTTG+TGG | + | chr2_3:16761951-16761970 | Msa0281370:intron | 25.0% |
| !!! | GGTTTCTATCTTTGTTATTT+TGG | + | chr2_3:16762144-16762163 | Msa0281370:intron | 25.0% |
| ! | AGCTAAAAAAATAAGGCAAA+CGG | + | chr2_3:16762569-16762588 | Msa0281370:intron | 25.0% |
| !! | ACGAGTAGTTTTTAATAAAC+AGG | - | chr2_3:16762819-16762838 | None:intergenic | 25.0% |
| ! | CTTAAAATTTATACTTCCTC+GGG | + | chr2_3:16762961-16762980 | Msa0281370:intron | 25.0% |
| ! | AACCAAATACATCAACTTTA+TGG | + | chr2_3:16763042-16763061 | Msa0281370:intron | 25.0% |
| ! | ATAATATGTAAACTTAGGCA+AGG | - | chr2_3:16763121-16763140 | None:intergenic | 25.0% |
| ! | GAAAACCTTTATATCTATGT+TGG | + | chr2_3:16763419-16763438 | Msa0281370:intron | 25.0% |
| ! | TATGTCCAACATAGATATAA+AGG | - | chr2_3:16763427-16763446 | None:intergenic | 25.0% |
| !!! | TTGATGCTTGTTTTATTTTC+AGG | + | chr2_3:16763495-16763514 | Msa0281370:intron | 25.0% |
| !!! | TGATGCTTGTTTTATTTTCA+GGG | + | chr2_3:16763496-16763515 | Msa0281370:intron | 25.0% |
| !!! | TTGAGTTCAACTTTTGTTAT+TGG | + | chr2_3:16763627-16763646 | Msa0281370:three_prime_UTR | 25.0% |
| !!! | TGCCTATTTTGAAATTCATT+TGG | + | chr2_3:16763674-16763693 | Msa0281370:three_prime_UTR | 25.0% |
| !! | TGTTTTCTATAACATTTCAG+AGG | + | chr2_3:16763750-16763769 | Msa0281370:three_prime_UTR | 25.0% |
| !!! | CCTTTTTTTTAATCAAAGGA+TGG | - | chr2_3:16763816-16763835 | None:intergenic | 25.0% |
| CATTTGTTCCACTCTAATTT+CGG | + | chr2_3:16762123-16762142 | Msa0281370:intron | 30.0% | |
| GTATTATTCATAAGCTTGTC+AGG | + | chr2_3:16762462-16762481 | Msa0281370:intron | 30.0% | |
| AAAAGAGTGAAGACTCAATT+TGG | - | chr2_3:16762710-16762729 | None:intergenic | 30.0% | |
| TAAGAAACAAATGGTTCAAC+AGG | + | chr2_3:16762993-16763012 | Msa0281370:intron | 30.0% | |
| TCAACAGGAGTTAATGTATT+TGG | + | chr2_3:16763008-16763027 | Msa0281370:intron | 30.0% | |
| !! | GACCATAAAGTTGATGTATT+TGG | - | chr2_3:16763047-16763066 | None:intergenic | 30.0% |
| TCAAATTTCTCAGCTTACAT+TGG | - | chr2_3:16763186-16763205 | None:intergenic | 30.0% | |
| AGAAACACACTGAAATAAGT+AGG | + | chr2_3:16763387-16763406 | Msa0281370:intron | 30.0% | |
| GAAACACACTGAAATAAGTA+GGG | + | chr2_3:16763388-16763407 | Msa0281370:intron | 30.0% | |
| TATTAATTCATGTCATGCCT+TGG | + | chr2_3:16763454-16763473 | Msa0281370:intron | 30.0% | |
| CATTTGTTCCACTCTAATTT+CGG | + | chr2_3:16762123-16762142 | Msa0281370:intron | 30.0% | |
| GTATTATTCATAAGCTTGTC+AGG | + | chr2_3:16762462-16762481 | Msa0281370:intron | 30.0% | |
| AAAAGAGTGAAGACTCAATT+TGG | - | chr2_3:16762710-16762729 | None:intergenic | 30.0% | |
| TAAGAAACAAATGGTTCAAC+AGG | + | chr2_3:16762993-16763012 | Msa0281370:intron | 30.0% | |
| TCAACAGGAGTTAATGTATT+TGG | + | chr2_3:16763008-16763027 | Msa0281370:intron | 30.0% | |
| !! | GACCATAAAGTTGATGTATT+TGG | - | chr2_3:16763047-16763066 | None:intergenic | 30.0% |
| TCAAATTTCTCAGCTTACAT+TGG | - | chr2_3:16763186-16763205 | None:intergenic | 30.0% | |
| AGAAACACACTGAAATAAGT+AGG | + | chr2_3:16763387-16763406 | Msa0281370:intron | 30.0% | |
| GAAACACACTGAAATAAGTA+GGG | + | chr2_3:16763388-16763407 | Msa0281370:intron | 30.0% | |
| TATTAATTCATGTCATGCCT+TGG | + | chr2_3:16763454-16763473 | Msa0281370:intron | 30.0% | |
| TTCTTCGTTCTGCATCTTTA+GGG | - | chr2_3:16761837-16761856 | None:intergenic | 35.0% | |
| AAAAGTTCATACCACTTCCT+AGG | - | chr2_3:16761884-16761903 | None:intergenic | 35.0% | |
| AAACAGGCTTATTACTGCTA+AGG | + | chr2_3:16761994-16762013 | Msa0281370:CDS | 35.0% | |
| CGAAATTAGAGTGGAACAAA+TGG | - | chr2_3:16762125-16762144 | None:intergenic | 35.0% | |
| GATAGAAACCGAAATTAGAG+TGG | - | chr2_3:16762134-16762153 | None:intergenic | 35.0% | |
| AAAACCCAGAAATGTGTGTA+TGG | - | chr2_3:16762278-16762297 | None:intergenic | 35.0% | |
| ! | TTCGGGTTTAATTCTTTGTC+GGG | - | chr2_3:16762605-16762624 | None:intergenic | 35.0% |
| ! | GTTCGGGTTTAATTCTTTGT+CGG | - | chr2_3:16762606-16762625 | None:intergenic | 35.0% |
| ! | TAAACCCGAACTACTTGTTT+TGG | + | chr2_3:16762615-16762634 | Msa0281370:intron | 35.0% |
| AGAGACCAAAACAAGTAGTT+CGG | - | chr2_3:16762623-16762642 | None:intergenic | 35.0% | |
| AAGACAAGCAAAGAAACACA+AGG | - | chr2_3:16762914-16762933 | None:intergenic | 35.0% | |
| TTTCTTATAAAAAGGACCCG+AGG | - | chr2_3:16762980-16762999 | None:intergenic | 35.0% | |
| !!! | GTCTCTAGTGGAGTATTTTT+TGG | + | chr2_3:16763260-16763279 | Msa0281370:intron | 35.0% |
| ! | AACTCGTCAAAGTATTTCCA+AGG | - | chr2_3:16763474-16763493 | None:intergenic | 35.0% |
| ! | AAATAGGCATCGCATTACAT+AGG | - | chr2_3:16763663-16763682 | None:intergenic | 35.0% |
| ! | TGAAGCACTTAAGCAAACTT+AGG | - | chr2_3:16763717-16763736 | None:intergenic | 35.0% |
| TTCTTCGTTCTGCATCTTTA+GGG | - | chr2_3:16761837-16761856 | None:intergenic | 35.0% | |
| AAAAGTTCATACCACTTCCT+AGG | - | chr2_3:16761884-16761903 | None:intergenic | 35.0% | |
| AAACAGGCTTATTACTGCTA+AGG | + | chr2_3:16761994-16762013 | Msa0281370:CDS | 35.0% | |
| CGAAATTAGAGTGGAACAAA+TGG | - | chr2_3:16762125-16762144 | None:intergenic | 35.0% | |
| GATAGAAACCGAAATTAGAG+TGG | - | chr2_3:16762134-16762153 | None:intergenic | 35.0% | |
| AAAACCCAGAAATGTGTGTA+TGG | - | chr2_3:16762278-16762297 | None:intergenic | 35.0% | |
| ! | TTCGGGTTTAATTCTTTGTC+GGG | - | chr2_3:16762605-16762624 | None:intergenic | 35.0% |
| ! | GTTCGGGTTTAATTCTTTGT+CGG | - | chr2_3:16762606-16762625 | None:intergenic | 35.0% |
| ! | TAAACCCGAACTACTTGTTT+TGG | + | chr2_3:16762615-16762634 | Msa0281370:intron | 35.0% |
| AGAGACCAAAACAAGTAGTT+CGG | - | chr2_3:16762623-16762642 | None:intergenic | 35.0% | |
| AAGACAAGCAAAGAAACACA+AGG | - | chr2_3:16762914-16762933 | None:intergenic | 35.0% | |
| TTTCTTATAAAAAGGACCCG+AGG | - | chr2_3:16762980-16762999 | None:intergenic | 35.0% | |
| !!! | GTCTCTAGTGGAGTATTTTT+TGG | + | chr2_3:16763260-16763279 | Msa0281370:intron | 35.0% |
| ! | AACTCGTCAAAGTATTTCCA+AGG | - | chr2_3:16763474-16763493 | None:intergenic | 35.0% |
| ! | AAATAGGCATCGCATTACAT+AGG | - | chr2_3:16763663-16763682 | None:intergenic | 35.0% |
| ! | TGAAGCACTTAAGCAAACTT+AGG | - | chr2_3:16763717-16763736 | None:intergenic | 35.0% |
| CTTCTTCGTTCTGCATCTTT+AGG | - | chr2_3:16761838-16761857 | None:intergenic | 40.0% | |
| CTAAAGATGCAGAACGAAGA+AGG | + | chr2_3:16761836-16761855 | Msa0281370:exon | 40.0% | |
| GTTTCAGTTCTGCTACAAAC+AGG | + | chr2_3:16761978-16761997 | Msa0281370:intron | 40.0% | |
| TCAGCTGAACATAGGTCATT+TGG | + | chr2_3:16762030-16762049 | Msa0281370:CDS | 40.0% | |
| ATAGGTCATTTGGATGAGAG+CGG | + | chr2_3:16762040-16762059 | Msa0281370:CDS | 40.0% | |
| AACAAATGGATACCTGAGCA+CGG | - | chr2_3:16762111-16762130 | None:intergenic | 40.0% | |
| AAGCACCATACACACATTTC+TGG | + | chr2_3:16762270-16762289 | Msa0281370:intron | 40.0% | |
| AGCACCATACACACATTTCT+GGG | + | chr2_3:16762271-16762290 | Msa0281370:intron | 40.0% | |
| GAGACCAAAACAAGTAGTTC+GGG | - | chr2_3:16762622-16762641 | None:intergenic | 40.0% | |
| CGATGTCATTGTGTTATCTC+TGG | + | chr2_3:16762732-16762751 | Msa0281370:intron | 40.0% | |
| TACATCACTGATGTCTCTAG+TGG | + | chr2_3:16763248-16763267 | Msa0281370:intron | 40.0% | |
| CACTGAAATAAGTAGGGAAG+TGG | + | chr2_3:16763394-16763413 | Msa0281370:intron | 40.0% | |
| TTGTGTCTACTGCTTAAGCT+CGG | - | chr2_3:16763566-16763585 | None:intergenic | 40.0% | |
| CTTCTTCGTTCTGCATCTTT+AGG | - | chr2_3:16761838-16761857 | None:intergenic | 40.0% | |
| CTAAAGATGCAGAACGAAGA+AGG | + | chr2_3:16761836-16761855 | Msa0281370:exon | 40.0% | |
| GTTTCAGTTCTGCTACAAAC+AGG | + | chr2_3:16761978-16761997 | Msa0281370:intron | 40.0% | |
| TCAGCTGAACATAGGTCATT+TGG | + | chr2_3:16762030-16762049 | Msa0281370:CDS | 40.0% | |
| ATAGGTCATTTGGATGAGAG+CGG | + | chr2_3:16762040-16762059 | Msa0281370:CDS | 40.0% | |
| AACAAATGGATACCTGAGCA+CGG | - | chr2_3:16762111-16762130 | None:intergenic | 40.0% | |
| AAGCACCATACACACATTTC+TGG | + | chr2_3:16762270-16762289 | Msa0281370:intron | 40.0% | |
| AGCACCATACACACATTTCT+GGG | + | chr2_3:16762271-16762290 | Msa0281370:intron | 40.0% | |
| GAGACCAAAACAAGTAGTTC+GGG | - | chr2_3:16762622-16762641 | None:intergenic | 40.0% | |
| CGATGTCATTGTGTTATCTC+TGG | + | chr2_3:16762732-16762751 | Msa0281370:intron | 40.0% | |
| TACATCACTGATGTCTCTAG+TGG | + | chr2_3:16763248-16763267 | Msa0281370:intron | 40.0% | |
| CACTGAAATAAGTAGGGAAG+TGG | + | chr2_3:16763394-16763413 | Msa0281370:intron | 40.0% | |
| TTGTGTCTACTGCTTAAGCT+CGG | - | chr2_3:16763566-16763585 | None:intergenic | 40.0% | |
| CTGTTTGCATCTCTCTCATC+TGG | + | chr2_3:16761660-16761679 | Msa0281370:five_prime_UTR | 45.0% | |
| CTTCCTAGGAATGTAGAGCT+CGG | - | chr2_3:16761870-16761889 | None:intergenic | 45.0% | |
| AGCTCTACATTCCTAGGAAG+TGG | + | chr2_3:16761870-16761889 | Msa0281370:CDS | 45.0% | |
| GCATCAGTTCAGCTGAACAT+AGG | + | chr2_3:16762022-16762041 | Msa0281370:CDS | 45.0% | |
| GATGAGAGCGGTGTTTACAA+TGG | + | chr2_3:16762052-16762071 | Msa0281370:CDS | 45.0% | |
| !! | TTCTCCACTTTTGCTCTCTG+TGG | + | chr2_3:16762079-16762098 | Msa0281370:CDS | 45.0% |
| ACAAATGGATACCTGAGCAC+GGG | - | chr2_3:16762110-16762129 | None:intergenic | 45.0% | |
| AGAATAAGCCCATCCAAACC+AGG | - | chr2_3:16762393-16762412 | None:intergenic | 45.0% | |
| GCAGAGGACAAATTCGTCTA+TGG | - | chr2_3:16762659-16762678 | None:intergenic | 45.0% | |
| TCCTCTGCCAGGTCTAAATT+TGG | + | chr2_3:16762671-16762690 | Msa0281370:intron | 45.0% | |
| TCTAAATTTGGCCTCAGCGA+GGG | + | chr2_3:16762683-16762702 | Msa0281370:intron | 45.0% | |
| ACAGTGGAATTGATCGCCTA+TGG | + | chr2_3:16763527-16763546 | Msa0281370:CDS | 45.0% | |
| ! | CGGTTTTCTTCTTCTGCCAT+AGG | - | chr2_3:16763546-16763565 | None:intergenic | 45.0% |
| CAAAGGATGGATACGCAGAA+GGG | - | chr2_3:16763803-16763822 | None:intergenic | 45.0% | |
| TCAAAGGATGGATACGCAGA+AGG | - | chr2_3:16763804-16763823 | None:intergenic | 45.0% | |
| CTGTTTGCATCTCTCTCATC+TGG | + | chr2_3:16761660-16761679 | Msa0281370:five_prime_UTR | 45.0% | |
| CTTCCTAGGAATGTAGAGCT+CGG | - | chr2_3:16761870-16761889 | None:intergenic | 45.0% | |
| AGCTCTACATTCCTAGGAAG+TGG | + | chr2_3:16761870-16761889 | Msa0281370:CDS | 45.0% | |
| GCATCAGTTCAGCTGAACAT+AGG | + | chr2_3:16762022-16762041 | Msa0281370:CDS | 45.0% | |
| GATGAGAGCGGTGTTTACAA+TGG | + | chr2_3:16762052-16762071 | Msa0281370:CDS | 45.0% | |
| !! | TTCTCCACTTTTGCTCTCTG+TGG | + | chr2_3:16762079-16762098 | Msa0281370:CDS | 45.0% |
| ACAAATGGATACCTGAGCAC+GGG | - | chr2_3:16762110-16762129 | None:intergenic | 45.0% | |
| AGAATAAGCCCATCCAAACC+AGG | - | chr2_3:16762393-16762412 | None:intergenic | 45.0% | |
| GCAGAGGACAAATTCGTCTA+TGG | - | chr2_3:16762659-16762678 | None:intergenic | 45.0% | |
| TCCTCTGCCAGGTCTAAATT+TGG | + | chr2_3:16762671-16762690 | Msa0281370:intron | 45.0% | |
| TCTAAATTTGGCCTCAGCGA+GGG | + | chr2_3:16762683-16762702 | Msa0281370:intron | 45.0% | |
| ACAGTGGAATTGATCGCCTA+TGG | + | chr2_3:16763527-16763546 | Msa0281370:CDS | 45.0% | |
| ! | CGGTTTTCTTCTTCTGCCAT+AGG | - | chr2_3:16763546-16763565 | None:intergenic | 45.0% |
| CAAAGGATGGATACGCAGAA+GGG | - | chr2_3:16763803-16763822 | None:intergenic | 45.0% | |
| TCAAAGGATGGATACGCAGA+AGG | - | chr2_3:16763804-16763823 | None:intergenic | 45.0% | |
| !!! | TTTTTTTATTTTTTATCAAT+TGG | + | chr2_3:16763320-16763339 | Msa0281370:intron | 5.0% |
| !!! | TTTTTTTATTTTTTATCAAT+TGG | + | chr2_3:16763320-16763339 | Msa0281370:intron | 5.0% |
| GCAAACAGACGCAAAGCAGA+GGG | - | chr2_3:16761648-16761667 | None:intergenic | 50.0% | |
| TGCAAACAGACGCAAAGCAG+AGG | - | chr2_3:16761649-16761668 | None:intergenic | 50.0% | |
| TCACCGAGCTCTACATTCCT+AGG | + | chr2_3:16761864-16761883 | Msa0281370:CDS | 50.0% | |
| GAAGCCACAGAGAGCAAAAG+TGG | - | chr2_3:16762086-16762105 | None:intergenic | 50.0% | |
| ATCCAAACCAGGCCTAGACT+GGG | - | chr2_3:16762382-16762401 | None:intergenic | 50.0% | |
| !! | AGTCTAGGCCTGGTTTGGAT+GGG | + | chr2_3:16762382-16762401 | Msa0281370:intron | 50.0% |
| AGACGAATTTGTCCTCTGCC+AGG | + | chr2_3:16762660-16762679 | Msa0281370:intron | 50.0% | |
| GCCAAATTTAGACCTGGCAG+AGG | - | chr2_3:16762675-16762694 | None:intergenic | 50.0% | |
| GCTGAGGCCAAATTTAGACC+TGG | - | chr2_3:16762681-16762700 | None:intergenic | 50.0% | |
| GTCTAAATTTGGCCTCAGCG+AGG | + | chr2_3:16762682-16762701 | Msa0281370:intron | 50.0% | |
| TTTCAGGGAGATGCTGACAG+TGG | + | chr2_3:16763511-16763530 | Msa0281370:intron | 50.0% | |
| GCAAACAGACGCAAAGCAGA+GGG | - | chr2_3:16761648-16761667 | None:intergenic | 50.0% | |
| TGCAAACAGACGCAAAGCAG+AGG | - | chr2_3:16761649-16761668 | None:intergenic | 50.0% | |
| TCACCGAGCTCTACATTCCT+AGG | + | chr2_3:16761864-16761883 | Msa0281370:CDS | 50.0% | |
| GAAGCCACAGAGAGCAAAAG+TGG | - | chr2_3:16762086-16762105 | None:intergenic | 50.0% | |
| ATCCAAACCAGGCCTAGACT+GGG | - | chr2_3:16762382-16762401 | None:intergenic | 50.0% | |
| !! | AGTCTAGGCCTGGTTTGGAT+GGG | + | chr2_3:16762382-16762401 | Msa0281370:intron | 50.0% |
| AGACGAATTTGTCCTCTGCC+AGG | + | chr2_3:16762660-16762679 | Msa0281370:intron | 50.0% | |
| GCCAAATTTAGACCTGGCAG+AGG | - | chr2_3:16762675-16762694 | None:intergenic | 50.0% | |
| GCTGAGGCCAAATTTAGACC+TGG | - | chr2_3:16762681-16762700 | None:intergenic | 50.0% | |
| GTCTAAATTTGGCCTCAGCG+AGG | + | chr2_3:16762682-16762701 | Msa0281370:intron | 50.0% | |
| TTTCAGGGAGATGCTGACAG+TGG | + | chr2_3:16763511-16763530 | Msa0281370:intron | 50.0% | |
| AACAGACGCAAAGCAGAGGG+AGG | - | chr2_3:16761645-16761664 | None:intergenic | 55.0% | |
| AGTTTCCCTCTGCCCAGTCT+AGG | + | chr2_3:16762367-16762386 | Msa0281370:intron | 55.0% | |
| CATCCAAACCAGGCCTAGAC+TGG | - | chr2_3:16762383-16762402 | None:intergenic | 55.0% | |
| !! | CAGTCTAGGCCTGGTTTGGA+TGG | + | chr2_3:16762381-16762400 | Msa0281370:intron | 55.0% |
| CTCAATTTGGTCCCTCGCTG+AGG | - | chr2_3:16762697-16762716 | None:intergenic | 55.0% | |
| ACGCAGAAGGGCAAAGCAGT+TGG | - | chr2_3:16763791-16763810 | None:intergenic | 55.0% | |
| AACAGACGCAAAGCAGAGGG+AGG | - | chr2_3:16761645-16761664 | None:intergenic | 55.0% | |
| AGTTTCCCTCTGCCCAGTCT+AGG | + | chr2_3:16762367-16762386 | Msa0281370:intron | 55.0% | |
| CATCCAAACCAGGCCTAGAC+TGG | - | chr2_3:16762383-16762402 | None:intergenic | 55.0% | |
| !! | CAGTCTAGGCCTGGTTTGGA+TGG | + | chr2_3:16762381-16762400 | Msa0281370:intron | 55.0% |
| CTCAATTTGGTCCCTCGCTG+AGG | - | chr2_3:16762697-16762716 | None:intergenic | 55.0% | |
| ACGCAGAAGGGCAAAGCAGT+TGG | - | chr2_3:16763791-16763810 | None:intergenic | 55.0% | |
| TGCCCAGTCTAGGCCTGGTT+TGG | + | chr2_3:16762377-16762396 | Msa0281370:intron | 60.0% | |
| TGCCCAGTCTAGGCCTGGTT+TGG | + | chr2_3:16762377-16762396 | Msa0281370:intron | 60.0% | |
| CTGTGGCTTCACCCGTGCTC+AGG | + | chr2_3:16762096-16762115 | Msa0281370:CDS | 65.0% | |
| CCAGGCCTAGACTGGGCAGA+GGG | - | chr2_3:16762375-16762394 | None:intergenic | 65.0% | |
| ACCAGGCCTAGACTGGGCAG+AGG | - | chr2_3:16762376-16762395 | None:intergenic | 65.0% | |
| CTGTGGCTTCACCCGTGCTC+AGG | + | chr2_3:16762096-16762115 | Msa0281370:CDS | 65.0% | |
| CCAGGCCTAGACTGGGCAGA+GGG | - | chr2_3:16762375-16762394 | None:intergenic | 65.0% | |
| ACCAGGCCTAGACTGGGCAG+AGG | - | chr2_3:16762376-16762395 | None:intergenic | 65.0% | |
| CCCTCTGCCCAGTCTAGGCC+TGG | + | chr2_3:16762372-16762391 | Msa0281370:intron | 70.0% | |
| CCCTCTGCCCAGTCTAGGCC+TGG | + | chr2_3:16762372-16762391 | Msa0281370:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 16761641 | 16763835 | 16761641 | ID=Msa0281370;Name=Msa0281370 |
| chr2_3 | mRNA | 16761641 | 16763835 | 16761641 | ID=Msa0281370-mRNA-1;Parent=Msa0281370;Name=Msa0281370-mRNA-1;_AED=0.07;_eAED=0.07;_QI=83|1|1|1|0.66|0.5|4|256|81 |
| chr2_3 | exon | 16761641 | 16761681 | 16761641 | ID=Msa0281370-mRNA-1:exon:6860;Parent=Msa0281370-mRNA-1 |
| chr2_3 | exon | 16761800 | 16761891 | 16761800 | ID=Msa0281370-mRNA-1:exon:6861;Parent=Msa0281370-mRNA-1 |
| chr2_3 | exon | 16761985 | 16762117 | 16761985 | ID=Msa0281370-mRNA-1:exon:6862;Parent=Msa0281370-mRNA-1 |
| chr2_3 | exon | 16763517 | 16763835 | 16763517 | ID=Msa0281370-mRNA-1:exon:6863;Parent=Msa0281370-mRNA-1 |
| chr2_3 | five_prime_UTR | 16761641 | 16761681 | 16761641 | ID=Msa0281370-mRNA-1:five_prime_utr;Parent=Msa0281370-mRNA-1 |
| chr2_3 | five_prime_UTR | 16761800 | 16761841 | 16761800 | ID=Msa0281370-mRNA-1:five_prime_utr;Parent=Msa0281370-mRNA-1 |
| chr2_3 | CDS | 16761842 | 16761891 | 16761842 | ID=Msa0281370-mRNA-1:cds;Parent=Msa0281370-mRNA-1 |
| chr2_3 | CDS | 16761985 | 16762117 | 16761985 | ID=Msa0281370-mRNA-1:cds;Parent=Msa0281370-mRNA-1 |
| chr2_3 | CDS | 16763517 | 16763579 | 16763517 | ID=Msa0281370-mRNA-1:cds;Parent=Msa0281370-mRNA-1 |
| chr2_3 | three_prime_UTR | 16763580 | 16763835 | 16763580 | ID=Msa0281370-mRNA-1:three_prime_utr;Parent=Msa0281370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
