Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459100 | XP_013460383.1 | 96.049 | 987 | 36 | 2 | 1 | 987 | 1 | 984 | 0.0 | 1929 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459100 | sp|O24303|TI110_PEA | 69.639 | 998 | 290 | 5 | 1 | 987 | 1 | 996 | 0.0 | 1334 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459100 | A0A072UYD0 | 96.049 | 987 | 36 | 2 | 1 | 987 | 1 | 984 | 0.0 | 1929 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024930 | Msa0459100 | 0.822265 | 2.597857e-53 | -8.615850e-47 |
| Msa0106620 | Msa0459100 | 0.826787 | 2.239546e-54 | -8.615850e-47 |
| Msa0106710 | Msa0459100 | 0.835297 | 1.821318e-56 | -8.615850e-47 |
| Msa0139670 | Msa0459100 | 0.858822 | 6.327686e-63 | -8.615850e-47 |
| Msa0207350 | Msa0459100 | 0.800686 | 1.282921e-48 | -8.615850e-47 |
| Msa0382370 | Msa0459100 | 0.831725 | 1.418446e-55 | -8.615850e-47 |
| Msa0432160 | Msa0459100 | 0.812747 | 3.628020e-51 | -8.615850e-47 |
| Msa0450400 | Msa0459100 | -0.840847 | 6.794738e-58 | -8.615850e-47 |
| Msa0459100 | Msa0476680 | 0.813430 | 2.569617e-51 | -8.615850e-47 |
| Msa0459100 | Msa0491000 | 0.808414 | 3.134489e-50 | -8.615850e-47 |
| Msa0459100 | Msa0521010 | 0.817750 | 2.804446e-52 | -8.615850e-47 |
| Msa0459100 | Msa0544160 | 0.823730 | 1.183296e-53 | -8.615850e-47 |
| Msa0459100 | Msa0547160 | 0.802276 | 6.058203e-49 | -8.615850e-47 |
| Msa0459100 | Msa0672550 | 0.803388 | 3.570211e-49 | -8.615850e-47 |
| Msa0459100 | Msa0693330 | 0.808937 | 2.422824e-50 | -8.615850e-47 |
| Msa0459100 | Msa0709120 | 0.855657 | 5.445335e-62 | -8.615850e-47 |
| Msa0459100 | Msa0735550 | 0.834135 | 3.570314e-56 | -8.615850e-47 |
| Msa0459100 | Msa0830660 | 0.811925 | 5.486387e-51 | -8.615850e-47 |
| Msa0459100 | Msa0855110 | 0.805535 | 1.274085e-49 | -8.615850e-47 |
| Msa0459100 | Msa0903780 | 0.800356 | 1.497994e-48 | -8.615850e-47 |
| Msa0459100 | Msa0934140 | 0.818199 | 2.220457e-52 | -8.615850e-47 |
| Msa0459100 | Msa0944200 | 0.800476 | 1.415787e-48 | -8.615850e-47 |
| Msa0459100 | Msa0974950 | 0.817792 | 2.744058e-52 | -8.615850e-47 |
| Msa0459100 | Msa1226270 | 0.803979 | 2.691422e-49 | -8.615850e-47 |
| Msa0459100 | Msa1234620 | 0.834530 | 2.841275e-56 | -8.615850e-47 |
| Msa0459100 | Msa1271130 | 0.823107 | 1.654963e-53 | -8.615850e-47 |
| Msa0459100 | Msa1369690 | 0.818010 | 2.449514e-52 | -8.615850e-47 |
| Msa0459100 | Msa1458090 | 0.813980 | 1.944712e-51 | -8.615850e-47 |
| Msa0241830 | Msa0459100 | 0.817063 | 4.003916e-52 | -8.615850e-47 |
| Msa0244970 | Msa0459100 | 0.824593 | 7.419344e-54 | -8.615850e-47 |
| Msa0257490 | Msa0459100 | 0.825439 | 4.685237e-54 | -8.615850e-47 |
| Msa0278570 | Msa0459100 | 0.810248 | 1.266832e-50 | -8.615850e-47 |
| Msa0281530 | Msa0459100 | 0.812400 | 4.322418e-51 | -8.615850e-47 |
| Msa0296790 | Msa0459100 | 0.830674 | 2.571136e-55 | -8.615850e-47 |
| Msa0321690 | Msa0459100 | 0.820741 | 5.844235e-53 | -8.615850e-47 |
| Msa0322900 | Msa0459100 | 0.804602 | 1.997042e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459100 | MtrunA17_Chr3g0106891 | 96.049 | 987 | 36 | 2 | 1 | 987 | 1 | 984 | 0.0 | 1929 |
| Msa0459100 | MtrunA17_Chr5g0432311 | 73.494 | 996 | 252 | 6 | 1 | 987 | 1 | 993 | 0.0 | 1400 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459100 | AT1G06950.1 | 65.135 | 1001 | 334 | 3 | 2 | 987 | 16 | 1016 | 0.0 | 1308 |
Find 236 sgRNAs with CRISPR-Local
Find 468 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAATGATCTTAATAAAT+TGG | 0.199085 | 3_3:-55450209 | None:intergenic |
| CGGAGGAAGGGAGGAGGAGG+AGG | 0.247804 | 3_3:-55443218 | None:intergenic |
| TTCGATTCCGGTGAGGTCTT+TGG | 0.248463 | 3_3:-55443242 | None:intergenic |
| CGATTGGCAGGTTGCTTTGC+AGG | 0.253126 | 3_3:+55450375 | Msa0459100:three_prime_UTR |
| ATCAAATTTAAGAATGCTTT+AGG | 0.264387 | 3_3:+55444535 | Msa0459100:CDS |
| TACTTGCTTTATTGCCTAAC+TGG | 0.270970 | 3_3:+55449062 | Msa0459100:CDS |
| AGATCTGTCCTATCTCTTTC+TGG | 0.277972 | 3_3:-55449029 | None:intergenic |
| CATTCCTCTTGTTAGTGATC+TGG | 0.281148 | 3_3:-55449112 | None:intergenic |
| ACGAAATCACAAATCAAAAT+TGG | 0.292361 | 3_3:-55450092 | None:intergenic |
| AGGAAGGGAGGAGGAGGAGG+AGG | 0.294610 | 3_3:-55443215 | None:intergenic |
| TTCGTTTGAAGGGGAGAGAT+TGG | 0.301108 | 3_3:+55450110 | Msa0459100:three_prime_UTR |
| TTCAATGGCAGCTGCCATTT+TGG | 0.310604 | 3_3:-55449366 | None:intergenic |
| CGAAGTGTAATAAGTTGTTC+AGG | 0.310988 | 3_3:-55445609 | None:intergenic |
| GATATCTGTGGCCGTTTGTT+TGG | 0.312975 | 3_3:+55447936 | Msa0459100:CDS |
| TCACCAACTGCTGAAGCTTT+TGG | 0.316117 | 3_3:-55447818 | None:intergenic |
| TCGATTCCGGTGAGGTCTTT+GGG | 0.327031 | 3_3:-55443241 | None:intergenic |
| TGGATTACTCTTCATGAATA+TGG | 0.331472 | 3_3:-55449896 | None:intergenic |
| GTCATGGAAGCGATTGAATC+AGG | 0.333545 | 3_3:+55448515 | Msa0459100:CDS |
| ACCTTCTGAGCATATTCTTC+GGG | 0.338052 | 3_3:-55449323 | None:intergenic |
| GTTGGTGGAGCGGTTGCTTT+GGG | 0.345654 | 3_3:+55443385 | Msa0459100:CDS |
| TGTTGGTGGAGCGGTTGCTT+TGG | 0.355949 | 3_3:+55443384 | Msa0459100:CDS |
| GGGCGGAGGAAGGGAGGAGG+AGG | 0.359115 | 3_3:-55443221 | None:intergenic |
| GTAACAAATTAATTGTTGAT+AGG | 0.363293 | 3_3:+55450050 | Msa0459100:three_prime_UTR |
| GTTATCAAACTCACTCATTC+AGG | 0.371287 | 3_3:+55449634 | Msa0459100:CDS |
| GAGTATAACTACTACCAAAA+TGG | 0.375611 | 3_3:+55449352 | Msa0459100:CDS |
| TAAGCAGATAAGAGAACTTA+AGG | 0.380872 | 3_3:+55449418 | Msa0459100:CDS |
| TCAGGCTAAGGCTTGAAGTT+GGG | 0.385968 | 3_3:+55444716 | Msa0459100:CDS |
| TGGTCGCATGGAAGATAATA+AGG | 0.387003 | 3_3:+55446509 | Msa0459100:CDS |
| CTTCAGCAGTTGGTGACTAA+TGG | 0.387778 | 3_3:+55447825 | Msa0459100:CDS |
| GCGGTTGCTTTGGGTGTGGC+TGG | 0.394197 | 3_3:+55443394 | Msa0459100:CDS |
| ATGGATATGATGCTGAAATT+AGG | 0.394460 | 3_3:+55448543 | Msa0459100:CDS |
| TACCTTCTGAGCATATTCTT+CGG | 0.404744 | 3_3:-55449324 | None:intergenic |
| AATCAGCTTGGTGGGATTCT+CGG | 0.405722 | 3_3:+55449155 | Msa0459100:CDS |
| AGCATATGTTACAAATGCTT+TGG | 0.407094 | 3_3:+55446482 | Msa0459100:CDS |
| ATGTGACGAAGATTCCATTT+GGG | 0.407162 | 3_3:+55449087 | Msa0459100:CDS |
| GTGGATGAAGAGGGTGGTAA+AGG | 0.407933 | 3_3:-55443151 | None:intergenic |
| GCAGCTGCTCTTCGCGAGTT+GGG | 0.408091 | 3_3:+55449973 | Msa0459100:CDS |
| ATTAATTGTTGATAGGCATA+TGG | 0.408213 | 3_3:+55450057 | Msa0459100:three_prime_UTR |
| CATCATCTTTCCTTCTACCT+TGG | 0.409135 | 3_3:+55444918 | Msa0459100:CDS |
| GACTCGCTTGCAGCATCTGT+TGG | 0.411289 | 3_3:+55449933 | Msa0459100:CDS |
| GAGTTGGTGAATGACATTAA+AGG | 0.411330 | 3_3:+55448837 | Msa0459100:CDS |
| ATTCCTCTTGTTAGTGATCT+GGG | 0.411800 | 3_3:-55449111 | None:intergenic |
| GTCTTTGGGCGGAGGAAGGG+AGG | 0.412772 | 3_3:-55443227 | None:intergenic |
| TGCCCTAGCGCCGCAAGTTG+CGG | 0.415076 | 3_3:+55443441 | Msa0459100:CDS |
| ACAATCGTTCTTGTTTCAAA+TGG | 0.416039 | 3_3:-55450402 | None:intergenic |
| AGTTGGTGAATGACATTAAA+GGG | 0.416119 | 3_3:+55448838 | Msa0459100:CDS |
| TCGTTTGAAGGGGAGAGATT+GGG | 0.418661 | 3_3:+55450111 | Msa0459100:three_prime_UTR |
| GCTTGCTGAAAACTTGTTCA+AGG | 0.419029 | 3_3:+55445805 | Msa0459100:intron |
| GTGTCATCTGTGCTTCCTCC+TGG | 0.420822 | 3_3:+55444475 | Msa0459100:CDS |
| AGCTTACCCAGAAAAGAAAC+TGG | 0.423264 | 3_3:-55446310 | None:intergenic |
| ATACCTGTGAATCGGTGAAC+TGG | 0.425469 | 3_3:-55444952 | None:intergenic |
| GGTGGTAAAGGGAAGGGTAA+TGG | 0.426939 | 3_3:-55443139 | None:intergenic |
| TTGTGTCACTGCGGTTTCAA+TGG | 0.429994 | 3_3:-55449381 | None:intergenic |
| ATATGTATATCAGCTGCATC+TGG | 0.430239 | 3_3:-55444568 | None:intergenic |
| TTTCATCTCGGCTCGAAGTT+CGG | 0.430685 | 3_3:+55443343 | Msa0459100:CDS |
| CAGCCGCAACTTGCGGCGCT+AGG | 0.432397 | 3_3:-55443444 | None:intergenic |
| ATGACCTTCCAGAAAGAGAT+AGG | 0.435374 | 3_3:+55449021 | Msa0459100:CDS |
| ACATCCGCCGTTGTCATTGC+CGG | 0.438266 | 3_3:+55443304 | Msa0459100:CDS |
| GATGATAACTTTCAACACTT+TGG | 0.440411 | 3_3:+55448806 | Msa0459100:CDS |
| TGAGGTCTTTGGGCGGAGGA+AGG | 0.444151 | 3_3:-55443231 | None:intergenic |
| GGAGCAACTAACTAATCTTC+AGG | 0.445959 | 3_3:+55449286 | Msa0459100:CDS |
| ATATCGATCGAATCGCCAAT+AGG | 0.446189 | 3_3:+55443524 | Msa0459100:CDS |
| ACGAGCTGCTGAAAATTCTA+AGG | 0.447439 | 3_3:+55448761 | Msa0459100:CDS |
| TAAAGATCAGCAAGCTCCTC+TGG | 0.449506 | 3_3:-55449871 | None:intergenic |
| TTCTGGTGGTGAGTTAGAAA+TGG | 0.450531 | 3_3:+55447471 | Msa0459100:CDS |
| TTTGGGCGGAGGAAGGGAGG+AGG | 0.451988 | 3_3:-55443224 | None:intergenic |
| GATGTGACGAAGATTCCATT+TGG | 0.454193 | 3_3:+55449086 | Msa0459100:CDS |
| GATCTCTTTGCCCGAGGTGT+TGG | 0.456351 | 3_3:+55446286 | Msa0459100:CDS |
| TTCTTCTAAATCAGCTTGGT+GGG | 0.456799 | 3_3:+55449147 | Msa0459100:CDS |
| TCAGTATCGTCTATCTGATC+AGG | 0.458618 | 3_3:+55445644 | Msa0459100:CDS |
| AGCAGCTGCTCTTCGCGAGT+TGG | 0.459705 | 3_3:+55449972 | Msa0459100:CDS |
| TCTTTCTATCACCATCATAC+TGG | 0.460644 | 3_3:-55446434 | None:intergenic |
| TTTGAGTGGTAAAGAAATAG+TGG | 0.465745 | 3_3:+55449178 | Msa0459100:CDS |
| AAATACGCTTCCAAGGTAGA+AGG | 0.467254 | 3_3:-55444928 | None:intergenic |
| GAGGAGGAGGATGAAGAGCG+AGG | 0.467637 | 3_3:-55443202 | None:intergenic |
| TTACTAATGTTGAGATCTGA+TGG | 0.468917 | 3_3:-55449569 | None:intergenic |
| ACTCGCTTGCAGCATCTGTT+GGG | 0.469030 | 3_3:+55449934 | Msa0459100:CDS |
| CAGGCTAAGGCTTGAAGTTG+GGG | 0.469171 | 3_3:+55444717 | Msa0459100:CDS |
| GGTGTATATGTTTAATAGCA+AGG | 0.475257 | 3_3:+55450269 | Msa0459100:three_prime_UTR |
| TCATCCTTTGTTGTTGAAGA+AGG | 0.475258 | 3_3:+55443498 | Msa0459100:CDS |
| TGATTTGTGATTTCGTTTGA+AGG | 0.475675 | 3_3:+55450099 | Msa0459100:three_prime_UTR |
| TGCTTTGGCCGGTGGTCGCA+TGG | 0.476197 | 3_3:+55446497 | Msa0459100:CDS |
| AGCCGCAACTTGCGGCGCTA+GGG | 0.478447 | 3_3:-55443443 | None:intergenic |
| TTCAGGCTAAGGCTTGAAGT+TGG | 0.479746 | 3_3:+55444715 | Msa0459100:CDS |
| CTCGCGAAGAGCAGCTGCTG+TGG | 0.480205 | 3_3:-55449968 | None:intergenic |
| GCGATTGAATCAGGGGTTGA+TGG | 0.481320 | 3_3:+55448524 | Msa0459100:CDS |
| TTCAAGGTGACGAGGCTGAT+AGG | 0.481412 | 3_3:+55444509 | Msa0459100:CDS |
| GAAGGTGTGAGAGTTGATGA+AGG | 0.481901 | 3_3:-55443106 | None:intergenic |
| GGTAATGGAATGAGAGAAGA+AGG | 0.482318 | 3_3:-55443124 | None:intergenic |
| GAGGTCTTTGGGCGGAGGAA+GGG | 0.484660 | 3_3:-55443230 | None:intergenic |
| CACATGGTTTGCAATTAACC+AGG | 0.487986 | 3_3:+55448585 | Msa0459100:CDS |
| CTCTTCGCGAGTTGGGATGT+AGG | 0.488106 | 3_3:+55449980 | Msa0459100:CDS |
| TGCAGCTGATATACATATAG+AGG | 0.488405 | 3_3:+55444573 | Msa0459100:CDS |
| AGAAGAGCTTGATAAGATCT+TGG | 0.488530 | 3_3:+55446219 | Msa0459100:CDS |
| TGGATGAAGAGGGTGGTAAA+GGG | 0.490178 | 3_3:-55443150 | None:intergenic |
| CCGCCAAAAGCTTCAGCAGT+TGG | 0.490455 | 3_3:+55447815 | Msa0459100:CDS |
| GATTTGTGATTTCGTTTGAA+GGG | 0.491389 | 3_3:+55450100 | Msa0459100:three_prime_UTR |
| TTAGTGATCTGGGCCCCAAA+TGG | 0.492782 | 3_3:-55449101 | None:intergenic |
| CCTGGCGGTGAGGAACTTCA+AGG | 0.493561 | 3_3:+55444493 | Msa0459100:CDS |
| TTCACTCACAGCCACTATCA+TGG | 0.494527 | 3_3:+55449842 | Msa0459100:CDS |
| AAATCCCGCGGCTACTGCGC+CGG | 0.495336 | 3_3:-55443323 | None:intergenic |
| GAGTTTGAAACGGTGTCGTT+TGG | 0.496433 | 3_3:-55443173 | None:intergenic |
| GAAGTGTAATAAGTTGTTCA+GGG | 0.497500 | 3_3:-55445608 | None:intergenic |
| ATTAAAGATTATTTGAGAAG+AGG | 0.497970 | 3_3:+55450147 | Msa0459100:three_prime_UTR |
| TTTCCAGTTCACCGATTCAC+AGG | 0.499129 | 3_3:+55444949 | Msa0459100:CDS |
| CATTGCCGGCGCAGTAGCCG+CGG | 0.506390 | 3_3:+55443318 | Msa0459100:CDS |
| TTGTCAATACTTAGGTTGGT+AGG | 0.506993 | 3_3:+55444686 | Msa0459100:intron |
| AGCAGATTTATACTTACCGT+TGG | 0.507145 | 3_3:+55450174 | Msa0459100:three_prime_UTR |
| AGGAGGAGGATGAAGAGCGA+GGG | 0.507256 | 3_3:-55443201 | None:intergenic |
| CTGTGGCCGTTTGTTTGGAA+AGG | 0.512306 | 3_3:+55447941 | Msa0459100:CDS |
| TACACAATTACCTCTTCCAA+TGG | 0.513266 | 3_3:-55445307 | None:intergenic |
| ATAAGAGAACTTAAGGAAGC+TGG | 0.513858 | 3_3:+55449425 | Msa0459100:CDS |
| CCGGTGAGGTCTTTGGGCGG+AGG | 0.515579 | 3_3:-55443235 | None:intergenic |
| TCTGGCAATTCCCATGATAG+TGG | 0.516429 | 3_3:-55449853 | None:intergenic |
| TGTGGAAGCTTGCAGAAACT+AGG | 0.519253 | 3_3:+55449612 | Msa0459100:CDS |
| AACTTACACAGCTCTTGTGC+GGG | 0.519404 | 3_3:-55445885 | None:intergenic |
| ATTGCACTTTGATCCACTAA+AGG | 0.521013 | 3_3:+55447534 | Msa0459100:CDS |
| TAATATGATGATATAACGAT+TGG | 0.521789 | 3_3:+55450359 | Msa0459100:three_prime_UTR |
| TGCTATGGCTATTGCAAGCA+AGG | 0.522286 | 3_3:+55448613 | Msa0459100:CDS |
| AGAGTAATTTCCGTCTGACC+AGG | 0.522856 | 3_3:-55448993 | None:intergenic |
| GTTCTTCTAAATCAGCTTGG+TGG | 0.523316 | 3_3:+55449146 | Msa0459100:CDS |
| ATTATCTTCCATGCGACCAC+CGG | 0.523336 | 3_3:-55446505 | None:intergenic |
| TCTTCCAATGGATTTCAGCT+TGG | 0.525527 | 3_3:-55445295 | None:intergenic |
| GAACGATTGTAATTCAAGAA+AGG | 0.525552 | 3_3:+55450415 | Msa0459100:three_prime_UTR |
| TATGTTACAAATGCTTTGGC+CGG | 0.526487 | 3_3:+55446486 | Msa0459100:CDS |
| TTTGAAACGGTGTCGTTTGG+TGG | 0.527160 | 3_3:-55443170 | None:intergenic |
| TCAGCTTGGAAGCATACAAC+CGG | 0.527645 | 3_3:-55445281 | None:intergenic |
| TGTCTAATATTAACCTATGT+CGG | 0.532139 | 3_3:+55450314 | Msa0459100:three_prime_UTR |
| ATAGTACCTTTCCAAACAAA+CGG | 0.532373 | 3_3:-55447947 | None:intergenic |
| TTAAGTATATACCTGTGAAT+CGG | 0.533217 | 3_3:-55444960 | None:intergenic |
| TCCTCAACACACTGTTGAAG+CGG | 0.533703 | 3_3:+55447905 | Msa0459100:CDS |
| ATCAACTGATGAGGTTGTAA+AGG | 0.533806 | 3_3:+55448875 | Msa0459100:CDS |
| TGGAGCGGTTGCTTTGGGTG+TGG | 0.534746 | 3_3:+55443390 | Msa0459100:CDS |
| TTCCTCAACTCAGCTAGTGC+AGG | 0.535693 | 3_3:-55447361 | None:intergenic |
| TATGTTCTTCTAAATCAGCT+TGG | 0.538352 | 3_3:+55449143 | Msa0459100:CDS |
| TCATGGAAGCGATTGAATCA+GGG | 0.538421 | 3_3:+55448516 | Msa0459100:CDS |
| CCTTGAAGTTCCTCACCGCC+AGG | 0.540407 | 3_3:-55444493 | None:intergenic |
| AGAAACTGGACCAACACCTC+GGG | 0.541737 | 3_3:-55446296 | None:intergenic |
| GTTACAAATGCTTTGGCCGG+TGG | 0.541797 | 3_3:+55446489 | Msa0459100:CDS |
| GCTTCCAAGCTGAAATCCAT+TGG | 0.546400 | 3_3:+55445291 | Msa0459100:CDS |
| TGATGGTGATAGAAAGATTG+AGG | 0.548624 | 3_3:+55446440 | Msa0459100:CDS |
| GGCACAGGTGGCCAGTATGA+TGG | 0.551859 | 3_3:+55446423 | Msa0459100:intron |
| TCTTCGTCACATCACCAGTT+AGG | 0.552124 | 3_3:-55449076 | None:intergenic |
| TTAAGACAGAGAAATCATAT+AGG | 0.552664 | 3_3:+55449668 | Msa0459100:CDS |
| TGAAGAGGGTGGTAAAGGGA+AGG | 0.553250 | 3_3:-55443146 | None:intergenic |
| AAGCTGAAATCCATTGGAAG+AGG | 0.554213 | 3_3:+55445297 | Msa0459100:CDS |
| AATAGCCATAGCAATTTCCC+TGG | 0.556792 | 3_3:-55448603 | None:intergenic |
| TACTGCGCCGGCAATGACAA+CGG | 0.557076 | 3_3:-55443311 | None:intergenic |
| TATATGTTTAATAGCAAGGA+AGG | 0.557238 | 3_3:+55450273 | Msa0459100:three_prime_UTR |
| AGTCGAAATGCGGCTGTTGG+TGG | 0.558647 | 3_3:+55443370 | Msa0459100:CDS |
| ACTAATCTTCAGGAGGAAGT+AGG | 0.558888 | 3_3:+55449296 | Msa0459100:CDS |
| ATGATGATATAACGATTGGC+AGG | 0.558890 | 3_3:+55450363 | Msa0459100:three_prime_UTR |
| ATTTGTGATTTCGTTTGAAG+GGG | 0.558938 | 3_3:+55450101 | Msa0459100:three_prime_UTR |
| ATTGCCGGCGCAGTAGCCGC+GGG | 0.560174 | 3_3:+55443319 | Msa0459100:CDS |
| GTTGCTTTGGGTGTGGCTGG+TGG | 0.561134 | 3_3:+55443397 | Msa0459100:CDS |
| AAGGTGTTTGCGATATACTT+TGG | 0.561172 | 3_3:-55447437 | None:intergenic |
| AATGGGGAAGCCTGGTCAGA+CGG | 0.568326 | 3_3:+55448983 | Msa0459100:CDS |
| TCACTCACAGCCACTATCAT+GGG | 0.570956 | 3_3:+55449843 | Msa0459100:CDS |
| CACTTTGGTTGTGACTGAGT+TGG | 0.571700 | 3_3:+55448821 | Msa0459100:CDS |
| GGTGGGATTCTCGGTTTGAG+TGG | 0.572981 | 3_3:+55449164 | Msa0459100:CDS |
| AAGCGGATATTGAGCAACGC+AGG | 0.576783 | 3_3:+55444746 | Msa0459100:CDS |
| GCATACAAAGAAATTGATTG+TGG | 0.577867 | 3_3:+55445829 | Msa0459100:CDS |
| TCTTCCTTCTTCAACAACAA+AGG | 0.579988 | 3_3:-55443502 | None:intergenic |
| ACCCGAAGAATATGCTCAGA+AGG | 0.581473 | 3_3:+55449322 | Msa0459100:CDS |
| TCTACTGCTTCGCTAACTCC+AGG | 0.582281 | 3_3:-55446199 | None:intergenic |
| CACTGGAGAGTTCGACGAGG+AGG | 0.584773 | 3_3:+55449529 | Msa0459100:CDS |
| AGAAATCAAGAGTTGTTGTG+TGG | 0.584804 | 3_3:+55449594 | Msa0459100:CDS |
| ATTAACCAGGGAAATTGCTA+TGG | 0.584957 | 3_3:+55448598 | Msa0459100:CDS |
| TGTCGTTTGGTGGATGAAGA+GGG | 0.586789 | 3_3:-55443160 | None:intergenic |
| AAACTTACACAGCTCTTGTG+CGG | 0.587812 | 3_3:-55445886 | None:intergenic |
| TTGGTGACTAATGGAGAGCT+TGG | 0.588528 | 3_3:+55447834 | Msa0459100:CDS |
| AACTGATGAGGTTGTAAAGG+AGG | 0.588721 | 3_3:+55448878 | Msa0459100:CDS |
| TTTGGGTGTGGCTGGTGGTG+CGG | 0.595369 | 3_3:+55443402 | Msa0459100:CDS |
| CATCTCGGCTCGAAGTTCGG+TGG | 0.596876 | 3_3:+55443346 | Msa0459100:CDS |
| TTCCTGCACTAGCTGAGTTG+AGG | 0.599576 | 3_3:+55447359 | Msa0459100:CDS |
| CCTCCGCCCAAAGACCTCAC+CGG | 0.599985 | 3_3:+55443235 | Msa0459100:CDS |
| ACAGTTGACAAAGGCAAAGG+TGG | 0.601199 | 3_3:+55449265 | Msa0459100:CDS |
| AAATTCACAGCCGCAACTTG+CGG | 0.601207 | 3_3:-55443451 | None:intergenic |
| CTGTCCTATCTCTTTCTGGA+AGG | 0.601426 | 3_3:-55449025 | None:intergenic |
| GAAGAGGGTGGTAAAGGGAA+GGG | 0.601875 | 3_3:-55443145 | None:intergenic |
| AACTGGAAAATACGCTTCCA+AGG | 0.602966 | 3_3:-55444935 | None:intergenic |
| CATGGAAGCGATTGAATCAG+GGG | 0.603458 | 3_3:+55448517 | Msa0459100:CDS |
| GTGTCGTTTGGTGGATGAAG+AGG | 0.606645 | 3_3:-55443161 | None:intergenic |
| TGTGACGAAGATTCCATTTG+GGG | 0.611993 | 3_3:+55449088 | Msa0459100:CDS |
| GAGGGAGTGAGAGTTTGAAA+CGG | 0.614229 | 3_3:-55443183 | None:intergenic |
| TGTGCTTCCTCCTGGCGGTG+AGG | 0.615924 | 3_3:+55444483 | Msa0459100:CDS |
| GTTAATCAAGACTGCAGTGG+AGG | 0.616128 | 3_3:+55450002 | Msa0459100:CDS |
| GGAAGTCGAAATGCGGCTGT+TGG | 0.616384 | 3_3:+55443367 | Msa0459100:CDS |
| TAATGGAGAGCTTGGTGAGG+AGG | 0.617175 | 3_3:+55447842 | Msa0459100:CDS |
| AAACTCACTCATTCAGGCTG+TGG | 0.617684 | 3_3:+55449640 | Msa0459100:CDS |
| GCTTGGAAGCATACAACCGG+TGG | 0.619486 | 3_3:-55445278 | None:intergenic |
| ATTGAAACCGCAGTGACACA+AGG | 0.623723 | 3_3:+55449383 | Msa0459100:CDS |
| AGCTGATGGACAGTTGACAA+AGG | 0.625998 | 3_3:+55449256 | Msa0459100:CDS |
| AAGAAACTGGACCAACACCT+CGG | 0.626641 | 3_3:-55446297 | None:intergenic |
| TGGTGTTGATTTAGACAACA+TGG | 0.628561 | 3_3:+55449445 | Msa0459100:CDS |
| AAATTCTAAGGAGTCTGCAA+AGG | 0.630689 | 3_3:+55448773 | Msa0459100:CDS |
| GTAGCCGCGGGATTTCATCT+CGG | 0.632362 | 3_3:+55443331 | Msa0459100:CDS |
| AGAAGAGTTTGTATTCTGAG+TGG | 0.632572 | 3_3:+55450026 | Msa0459100:exon |
| GCCGCTTCAACAGTGTGTTG+AGG | 0.638106 | 3_3:-55447906 | None:intergenic |
| TAGGTTAATCAAGACTGCAG+TGG | 0.638965 | 3_3:+55449999 | Msa0459100:CDS |
| AAATGCGGCTGTTGGTGGAG+CGG | 0.640823 | 3_3:+55443375 | Msa0459100:CDS |
| CAAAGAGATCGACATCCGCA+TGG | 0.647627 | 3_3:-55446273 | None:intergenic |
| TGAAGTTGGGGATCGTGAAG+CGG | 0.649605 | 3_3:+55444729 | Msa0459100:CDS |
| TGGACAGTTGACAAAGGCAA+AGG | 0.650574 | 3_3:+55449262 | Msa0459100:CDS |
| TTGGCTATCTGAAATTCCAA+CGG | 0.652162 | 3_3:-55450190 | None:intergenic |
| AAACCGCAGTGACACAAGGA+CGG | 0.652554 | 3_3:+55449387 | Msa0459100:CDS |
| TGCGCCGGCAATGACAACGG+CGG | 0.657491 | 3_3:-55443308 | None:intergenic |
| GGGCCCAGATCACTAACAAG+AGG | 0.659587 | 3_3:+55449108 | Msa0459100:CDS |
| ACATGGTTTGCAATTAACCA+GGG | 0.659898 | 3_3:+55448586 | Msa0459100:CDS |
| GCAACTAACTAATCTTCAGG+AGG | 0.660667 | 3_3:+55449289 | Msa0459100:CDS |
| AGCGGATATTGAGCAACGCA+GGG | 0.665222 | 3_3:+55444747 | Msa0459100:CDS |
| CTATACGTGACAATGCCCAC+CGG | 0.667290 | 3_3:+55445262 | Msa0459100:CDS |
| ACAGAGAAATCATATAGGAG+TGG | 0.668063 | 3_3:+55449673 | Msa0459100:CDS |
| CTTGGAAGCATACAACCGGT+GGG | 0.669381 | 3_3:-55445277 | None:intergenic |
| GATGTAGCGAGACGGAGTGG+TGG | 0.670974 | 3_3:-55443286 | None:intergenic |
| TCATCTGTGCTTCCTCCTGG+CGG | 0.676364 | 3_3:+55444478 | Msa0459100:CDS |
| GATGTCGATCTCTTTGCCCG+AGG | 0.676972 | 3_3:+55446280 | Msa0459100:CDS |
| TGCTGATGTATCAACTGATG+AGG | 0.679643 | 3_3:+55448866 | Msa0459100:CDS |
| TCAGTACGAAAAGCAGCACA+TGG | 0.680845 | 3_3:+55448569 | Msa0459100:CDS |
| GCGGATGTAGCGAGACGGAG+TGG | 0.682246 | 3_3:-55443289 | None:intergenic |
| GTTCGGTGGAAGTCGAAATG+CGG | 0.682324 | 3_3:+55443360 | Msa0459100:CDS |
| TGATAGGCATATGGAACACG+TGG | 0.688496 | 3_3:+55450066 | Msa0459100:three_prime_UTR |
| GCGGCTCATTCAGATATCTG+TGG | 0.688672 | 3_3:+55447924 | Msa0459100:CDS |
| GTTGGTGAATGACATTAAAG+GGG | 0.688901 | 3_3:+55448839 | Msa0459100:CDS |
| CAGCCGTCCTTGTGTCACTG+CGG | 0.690164 | 3_3:-55449390 | None:intergenic |
| GACTAATGGAGAGCTTGGTG+AGG | 0.696243 | 3_3:+55447839 | Msa0459100:CDS |
| CAACGGCGGATGTAGCGAGA+CGG | 0.699769 | 3_3:-55443294 | None:intergenic |
| TGAGGAACTTCAAGGTGACG+AGG | 0.702194 | 3_3:+55444501 | Msa0459100:CDS |
| ACTATCATGGGAATTGCCAG+AGG | 0.706284 | 3_3:+55449855 | Msa0459100:CDS |
| TGAAGTTCCTCACCGCCAGG+AGG | 0.709242 | 3_3:-55444490 | None:intergenic |
| AAGGCCTGTAAAATTCACGA+AGG | 0.717248 | 3_3:+55447553 | Msa0459100:CDS |
| CGTTTGGTGGATGAAGAGGG+TGG | 0.718389 | 3_3:-55443157 | None:intergenic |
| ATTCCGGTGAGGTCTTTGGG+CGG | 0.726694 | 3_3:-55443238 | None:intergenic |
| CGAGCCGAGATGAAATCCCG+CGG | 0.737562 | 3_3:-55443335 | None:intergenic |
| CATATCGTTAAAGAACCATG+CGG | 0.752667 | 3_3:+55446258 | Msa0459100:CDS |
| AGGCACTGGAGAGTTCGACG+AGG | 0.790173 | 3_3:+55449526 | Msa0459100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAATAAATAAAAACTT+GGG | - | chr3_3:55446110-55446129 | None:intergenic | 10.0% |
| !! | TAAAGAAATAAATAAAAACT+TGG | - | chr3_3:55446111-55446130 | None:intergenic | 10.0% |
| !!! | TTTAATTTAAACCATTAATA+TGG | + | chr3_3:55446800-55446819 | Msa0459100:intron | 10.0% |
| !! | AATTAAGCTTATATTAATTA+AGG | - | chr3_3:55447193-55447212 | None:intergenic | 10.0% |
| !!! | TTTTCATAAAAATGGTTAAT+CGG | + | chr3_3:55443763-55443782 | Msa0459100:intron | 15.0% |
| !!! | TTGATTTACATTGATAATTA+TGG | + | chr3_3:55443804-55443823 | Msa0459100:intron | 15.0% |
| !!! | TGATTTACATTGATAATTAT+GGG | + | chr3_3:55443805-55443824 | Msa0459100:intron | 15.0% |
| !! | AATTCAATTAATCACAAATT+TGG | + | chr3_3:55443843-55443862 | Msa0459100:intron | 15.0% |
| !! | ATTCATATAGAAACAATAAT+AGG | - | chr3_3:55445203-55445222 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTCTTAATTGTT+TGG | - | chr3_3:55446589-55446608 | None:intergenic | 15.0% |
| !! | TTAATATCCAATGAAATATT+TGG | - | chr3_3:55446655-55446674 | None:intergenic | 15.0% |
| !! | TTAGAAAATTTATAAGTGTT+TGG | + | chr3_3:55446701-55446720 | Msa0459100:intron | 15.0% |
| !! | ATTGTATTATAGAGAAAATT+TGG | - | chr3_3:55446868-55446887 | None:intergenic | 15.0% |
| !! | TAGCTATAAAAAATTAACTT+AGG | - | chr3_3:55447987-55448006 | None:intergenic | 15.0% |
| !! | TAACTAGATATTAATTAGAA+TGG | + | chr3_3:55448140-55448159 | Msa0459100:intron | 15.0% |
| !!! | ATATTAATTAGAATGGTTTT+TGG | + | chr3_3:55448147-55448166 | Msa0459100:intron | 15.0% |
| !! | AATGATCTTAATAAATTACA+TGG | - | chr3_3:55448278-55448297 | None:intergenic | 15.0% |
| !! | AAAGAACTTGTAAAAAAAAT+GGG | + | chr3_3:55448966-55448985 | Msa0459100:CDS | 15.0% |
| !! | ATGTAATACATTTCTAAATT+TGG | + | chr3_3:55449729-55449748 | Msa0459100:intron | 15.0% |
| !! | ATTGAATGATCTTAATAAAT+TGG | - | chr3_3:55450212-55450231 | None:intergenic | 15.0% |
| !! | ATGAATTCAAATAAACCTAT+TGG | - | chr3_3:55443542-55443561 | None:intergenic | 20.0% |
| !! | TTAATCTCTTATGTTATTAC+AGG | + | chr3_3:55443672-55443691 | Msa0459100:intron | 20.0% |
| !!! | TAACCATTTTTATGAAAAAG+TGG | - | chr3_3:55443761-55443780 | None:intergenic | 20.0% |
| !! | TTTCATAAAAATGGTTAATC+GGG | + | chr3_3:55443764-55443783 | Msa0459100:intron | 20.0% |
| !! | TTTAGTGTAATTATAAGTGT+TGG | + | chr3_3:55444072-55444091 | Msa0459100:intron | 20.0% |
| !!! | TTTGCAATGCTTAATTTTTT+AGG | + | chr3_3:55444231-55444250 | Msa0459100:intron | 20.0% |
| !!! | AATGCTTAATTTTTTAGGTA+TGG | + | chr3_3:55444236-55444255 | Msa0459100:intron | 20.0% |
| !! | ATCAAATTTAAGAATGCTTT+AGG | + | chr3_3:55444535-55444554 | Msa0459100:CDS | 20.0% |
| !!! | ATTATTTACATATACTGGTT+CGG | - | chr3_3:55444792-55444811 | None:intergenic | 20.0% |
| !! | AAGCTATTATTTACATATAC+TGG | - | chr3_3:55444797-55444816 | None:intergenic | 20.0% |
| !! | AGTATATGTAAATAATAGCT+TGG | + | chr3_3:55444796-55444815 | Msa0459100:intron | 20.0% |
| !!! | ATTGTTTCTATATGAATAGA+TGG | + | chr3_3:55445206-55445225 | Msa0459100:intron | 20.0% |
| !! | CATATTTGTAATGAAATGAA+TGG | + | chr3_3:55445350-55445369 | Msa0459100:intron | 20.0% |
| !! | TGGATATTAAAAAAGTTGTA+TGG | + | chr3_3:55446665-55446684 | Msa0459100:intron | 20.0% |
| !! | GGATATTAAAAAAGTTGTAT+GGG | + | chr3_3:55446666-55446685 | Msa0459100:intron | 20.0% |
| !! | ATATTCTAAACTAAAGTCTT+GGG | + | chr3_3:55447054-55447073 | Msa0459100:intron | 20.0% |
| !!! | ATTCATCACATAAATTTTGT+AGG | - | chr3_3:55447516-55447535 | None:intergenic | 20.0% |
| !! | CTATAAAAAATTAACTTAGG+AGG | - | chr3_3:55447984-55448003 | None:intergenic | 20.0% |
| !! | TGATATCTTTGTCAATAAAT+GGG | - | chr3_3:55448025-55448044 | None:intergenic | 20.0% |
| !! | ATGATATCTTTGTCAATAAA+TGG | - | chr3_3:55448026-55448045 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTATAGGTTGTCA+TGG | + | chr3_3:55448499-55448518 | Msa0459100:intron | 20.0% |
| !!! | TCATTTATGAGGATTTTAAT+TGG | + | chr3_3:55448667-55448686 | Msa0459100:intron | 20.0% |
| !! | CAAAGAACTTGTAAAAAAAA+TGG | + | chr3_3:55448965-55448984 | Msa0459100:CDS | 20.0% |
| !! | AAGAACTTGTAAAAAAAATG+GGG | + | chr3_3:55448967-55448986 | Msa0459100:CDS | 20.0% |
| !! | TACATTTCTAAATTTGGTTA+TGG | + | chr3_3:55449735-55449754 | Msa0459100:intron | 20.0% |
| !! | GTAACAAATTAATTGTTGAT+AGG | + | chr3_3:55450050-55450069 | Msa0459100:three_prime_UTR | 20.0% |
| !! | ATTAAAGATTATTTGAGAAG+AGG | + | chr3_3:55450147-55450166 | Msa0459100:three_prime_UTR | 20.0% |
| !! | TAATATGATGATATAACGAT+TGG | + | chr3_3:55450359-55450378 | Msa0459100:three_prime_UTR | 20.0% |
| !! | GGTTATGAGTTATAAGTTTT+CGG | + | chr3_3:55443693-55443712 | Msa0459100:intron | 25.0% |
| ! | TGAGATAAAAAAACGTTTCA+TGG | + | chr3_3:55443731-55443750 | Msa0459100:intron | 25.0% |
| !!! | CAACCACTTTTTCATAAAAA+TGG | + | chr3_3:55443755-55443774 | Msa0459100:intron | 25.0% |
| !!! | ATTTTTTAACGTCCTTAATC+AGG | + | chr3_3:55443907-55443926 | Msa0459100:intron | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr3_3:55444041-55444060 | None:intergenic | 25.0% |
| ! | TATGAAGTTATGTGAGAAAT+GGG | + | chr3_3:55444377-55444396 | Msa0459100:intron | 25.0% |
| ! | TTTGTGATGTGTGTTAATTA+TGG | + | chr3_3:55444598-55444617 | Msa0459100:intron | 25.0% |
| ! | AATATGTTTCATATCATGAC+TGG | + | chr3_3:55444633-55444652 | Msa0459100:intron | 25.0% |
| ! | ATATGTAAATAATAGCTTGG+TGG | + | chr3_3:55444799-55444818 | Msa0459100:intron | 25.0% |
| ! | TTAAGTATATACCTGTGAAT+CGG | - | chr3_3:55444963-55444982 | None:intergenic | 25.0% |
| ! | CATTAAAATTACAAGACACA+AGG | - | chr3_3:55445153-55445172 | None:intergenic | 25.0% |
| ! | AGAGTTACATAATTCAGAAT+TGG | - | chr3_3:55445487-55445506 | None:intergenic | 25.0% |
| ! | TAAGAAAAACGTAGAATTAG+TGG | + | chr3_3:55445534-55445553 | Msa0459100:intron | 25.0% |
| ! | AATATCTGGTGAGAAATATT+CGG | - | chr3_3:55445586-55445605 | None:intergenic | 25.0% |
| ! | GAACTATTTGAAAGTCATAA+AGG | - | chr3_3:55445734-55445753 | None:intergenic | 25.0% |
| ! | ATGACTTTCAAATAGTTCAT+TGG | + | chr3_3:55445736-55445755 | Msa0459100:intron | 25.0% |
| ! | AATGCATAAAAATCCAACAT+GGG | - | chr3_3:55445952-55445971 | None:intergenic | 25.0% |
| !! | TTCAACATGGAAATTGTTTT+GGG | - | chr3_3:55446050-55446069 | None:intergenic | 25.0% |
| !! | ATTCAACATGGAAATTGTTT+TGG | - | chr3_3:55446051-55446070 | None:intergenic | 25.0% |
| ! | TATAGATTTGACATTCAACA+TGG | - | chr3_3:55446063-55446082 | None:intergenic | 25.0% |
| !! | TTGAGATAAATGTTTTCTTG+AGG | + | chr3_3:55446620-55446639 | Msa0459100:intron | 25.0% |
| ! | GATCTTTCCAAATATTTCAT+TGG | + | chr3_3:55446645-55446664 | Msa0459100:intron | 25.0% |
| ! | ATAGATTGGATCCATATTAA+TGG | - | chr3_3:55446814-55446833 | None:intergenic | 25.0% |
| ! | TTAATATGGATCCAATCTAT+TGG | + | chr3_3:55446814-55446833 | Msa0459100:intron | 25.0% |
| ! | CAACAAGTTTAATCAGAATT+TGG | - | chr3_3:55446892-55446911 | None:intergenic | 25.0% |
| !!! | TTCTGATTAAACTTGTTGTT+TGG | + | chr3_3:55446894-55446913 | Msa0459100:intron | 25.0% |
| !!! | TCTGATTAAACTTGTTGTTT+GGG | + | chr3_3:55446895-55446914 | Msa0459100:intron | 25.0% |
| ! | GATATTCTAAACTAAAGTCT+TGG | + | chr3_3:55447053-55447072 | Msa0459100:intron | 25.0% |
| ! | TATTCTAAACTAAAGTCTTG+GGG | + | chr3_3:55447055-55447074 | Msa0459100:intron | 25.0% |
| ! | ACTCATTTATTAGAGAAAAG+AGG | + | chr3_3:55447268-55447287 | Msa0459100:intron | 25.0% |
| ! | TAAACATGACAAGAAATATG+TGG | - | chr3_3:55447588-55447607 | None:intergenic | 25.0% |
| !!! | ACTCAAAGTGTTGAAAAAAT+TGG | - | chr3_3:55447641-55447660 | None:intergenic | 25.0% |
| ! | CGTTTATATCTTGATTCTTA+AGG | + | chr3_3:55447671-55447690 | Msa0459100:intron | 25.0% |
| !! | GTATCTTCTTTTATAGTTGT+TGG | + | chr3_3:55447718-55447737 | Msa0459100:intron | 25.0% |
| !!! | TAATTGATAGTACTGATATG+TGG | + | chr3_3:55448406-55448425 | Msa0459100:intron | 25.0% |
| !! | TTTTTACAAGTTCTTTGTCA+GGG | - | chr3_3:55448962-55448981 | None:intergenic | 25.0% |
| !!! | TTTTTTACAAGTTCTTTGTC+AGG | - | chr3_3:55448963-55448982 | None:intergenic | 25.0% |
| ! | TTAAGACAGAGAAATCATAT+AGG | + | chr3_3:55449668-55449687 | Msa0459100:CDS | 25.0% |
| !! | ATTAATTGTTGATAGGCATA+TGG | + | chr3_3:55450057-55450076 | Msa0459100:three_prime_UTR | 25.0% |
| ! | ACGAAATCACAAATCAAAAT+TGG | - | chr3_3:55450095-55450114 | None:intergenic | 25.0% |
| ! | TATATGTTTAATAGCAAGGA+AGG | + | chr3_3:55450273-55450292 | Msa0459100:three_prime_UTR | 25.0% |
| ! | TGTCTAATATTAACCTATGT+CGG | + | chr3_3:55450314-55450333 | Msa0459100:three_prime_UTR | 25.0% |
| GATTAACAGTTATGCAATGA+CGG | - | chr3_3:55443658-55443677 | None:intergenic | 30.0% | |
| TTCAACACAGTAATGATACA+TGG | - | chr3_3:55443962-55443981 | None:intergenic | 30.0% | |
| !! | TTTTAGGTATGGTGTGAAAA+AGG | + | chr3_3:55444247-55444266 | Msa0459100:intron | 30.0% |
| TTCTCACATAACTTCATAGT+TGG | - | chr3_3:55444375-55444394 | None:intergenic | 30.0% | |
| CTATGAAGTTATGTGAGAAA+TGG | + | chr3_3:55444376-55444395 | Msa0459100:intron | 30.0% | |
| !!! | ATGGGTCATGATTTTTTGTA+CGG | + | chr3_3:55444395-55444414 | Msa0459100:intron | 30.0% |
| !!! | TTCGCTTCGATTTTTTATTC+AGG | + | chr3_3:55444449-55444468 | Msa0459100:intron | 30.0% |
| ! | TGTTGCTTATCTTACTTGTT+TGG | + | chr3_3:55444660-55444679 | Msa0459100:intron | 30.0% |
| !! | TTTGGTTCTTGTCAATACTT+AGG | + | chr3_3:55444678-55444697 | Msa0459100:intron | 30.0% |
| ! | GGTGGATTCAAATGAAAAAA+TGG | + | chr3_3:55444817-55444836 | Msa0459100:intron | 30.0% |
| GTACTGGAGATTTACTATTA+TGG | - | chr3_3:55444850-55444869 | None:intergenic | 30.0% | |
| TAATAGTAAATCTCCAGTAC+AGG | + | chr3_3:55444850-55444869 | Msa0459100:intron | 30.0% | |
| ! | TTTGTGTCATATCTCGTTTT+TGG | + | chr3_3:55444890-55444909 | Msa0459100:CDS | 30.0% |
| TTGTCTTCATACGATTAAAG+TGG | + | chr3_3:55445035-55445054 | Msa0459100:intron | 30.0% | |
| TAATTGTATTATCGTGCACA+TGG | + | chr3_3:55445059-55445078 | Msa0459100:intron | 30.0% | |
| AATTGTATTATCGTGCACAT+GGG | + | chr3_3:55445060-55445079 | Msa0459100:intron | 30.0% | |
| !!! | GATGTGCAATGTTAGTTTTT+GGG | - | chr3_3:55445092-55445111 | None:intergenic | 30.0% |
| AGTCAAGAATGACATGAATA+TGG | + | chr3_3:55445127-55445146 | Msa0459100:intron | 30.0% | |
| GGACTAGAATAACAAAATGA+TGG | - | chr3_3:55445182-55445201 | None:intergenic | 30.0% | |
| AGATGGCAATAATATATTCC+TGG | + | chr3_3:55445223-55445242 | Msa0459100:intron | 30.0% | |
| AATAATATATTCCTGGCTTC+AGG | + | chr3_3:55445230-55445249 | Msa0459100:intron | 30.0% | |
| GAAGTGTAATAAGTTGTTCA+GGG | - | chr3_3:55445611-55445630 | None:intergenic | 30.0% | |
| ! | TTCAAATGCTTCTTTTCTCT+TGG | + | chr3_3:55445703-55445722 | Msa0459100:intron | 30.0% |
| ACTTTCAAATAGTTCATTGG+TGG | + | chr3_3:55445739-55445758 | Msa0459100:intron | 30.0% | |
| CTTTCAAATAGTTCATTGGT+GGG | + | chr3_3:55445740-55445759 | Msa0459100:intron | 30.0% | |
| GCATACAAAGAAATTGATTG+TGG | + | chr3_3:55445829-55445848 | Msa0459100:CDS | 30.0% | |
| ATGCATAAAAATCCAACATG+GGG | - | chr3_3:55445951-55445970 | None:intergenic | 30.0% | |
| GAATGCATAAAAATCCAACA+TGG | - | chr3_3:55445953-55445972 | None:intergenic | 30.0% | |
| ! | TTCGACAATTCTTTTTATCG+AGG | + | chr3_3:55445970-55445989 | Msa0459100:intron | 30.0% |
| ! | TCGACAATTCTTTTTATCGA+GGG | + | chr3_3:55445971-55445990 | Msa0459100:intron | 30.0% |
| AACTTAAAATTTCTCAGTCC+TGG | + | chr3_3:55446181-55446200 | Msa0459100:intron | 30.0% | |
| TGCCAATCAAATATGAACTA+CGG | - | chr3_3:55446407-55446426 | None:intergenic | 30.0% | |
| AGCATATGTTACAAATGCTT+TGG | + | chr3_3:55446482-55446501 | Msa0459100:CDS | 30.0% | |
| ATGGAAGATAATAAGGTAAG+TGG | + | chr3_3:55446516-55446535 | Msa0459100:intron | 30.0% | |
| !!! | CAGTGCTTATTTTAACACAA+TGG | - | chr3_3:55446542-55446561 | None:intergenic | 30.0% |
| ! | GTTTGGAGCAAAAAAAATTC+AGG | - | chr3_3:55446572-55446591 | None:intergenic | 30.0% |
| TAAAAAAGTTGTATGGGAAG+TGG | + | chr3_3:55446672-55446691 | Msa0459100:intron | 30.0% | |
| AAAAAAGTTGTATGGGAAGT+GGG | + | chr3_3:55446673-55446692 | Msa0459100:intron | 30.0% | |
| AAGTGTTTGGAAAAGATAGA+TGG | + | chr3_3:55446714-55446733 | Msa0459100:intron | 30.0% | |
| ! | TGCTTTGTTATCTACTAGTT+TGG | + | chr3_3:55446768-55446787 | Msa0459100:intron | 30.0% |
| AAAGCTAAAGCTATTTAGCA+AGG | - | chr3_3:55447082-55447101 | None:intergenic | 30.0% | |
| CTAACATACAAGTCAAGTAT+TGG | - | chr3_3:55447242-55447261 | None:intergenic | 30.0% | |
| !! | CAATACTTGACTTGTATGTT+AGG | + | chr3_3:55447240-55447259 | Msa0459100:intron | 30.0% |
| GAAAAAATTGGCACAAAATG+TGG | - | chr3_3:55447629-55447648 | None:intergenic | 30.0% | |
| ATAGTACCTTTCCAAACAAA+CGG | - | chr3_3:55447950-55447969 | None:intergenic | 30.0% | |
| CAAATTTAATCGTATGCAGA+TGG | - | chr3_3:55448326-55448345 | None:intergenic | 30.0% | |
| ! | ATTTTGTGTTCTTTTCAGCT+TGG | - | chr3_3:55448372-55448391 | None:intergenic | 30.0% |
| !!! | TTTTGTTTTTCTGTCTTGCA+AGG | + | chr3_3:55448444-55448463 | Msa0459100:intron | 30.0% |
| !! | TTTGTTTTTCTGTCTTGCAA+GGG | + | chr3_3:55448445-55448464 | Msa0459100:intron | 30.0% |
| ATGGATATGATGCTGAAATT+AGG | + | chr3_3:55448543-55448562 | Msa0459100:CDS | 30.0% | |
| AGAATTGTTGGTCATTTATG+AGG | + | chr3_3:55448656-55448675 | Msa0459100:intron | 30.0% | |
| GATGATAACTTTCAACACTT+TGG | + | chr3_3:55448806-55448825 | Msa0459100:CDS | 30.0% | |
| !! | AGTTGGTGAATGACATTAAA+GGG | + | chr3_3:55448838-55448857 | Msa0459100:CDS | 30.0% |
| AAAAACTGAAGACGAAGAAT+GGG | + | chr3_3:55448908-55448927 | Msa0459100:CDS | 30.0% | |
| TATGTTCTTCTAAATCAGCT+TGG | + | chr3_3:55449143-55449162 | Msa0459100:CDS | 30.0% | |
| TTTGAGTGGTAAAGAAATAG+TGG | + | chr3_3:55449178-55449197 | Msa0459100:CDS | 30.0% | |
| GAGTATAACTACTACCAAAA+TGG | + | chr3_3:55449352-55449371 | Msa0459100:CDS | 30.0% | |
| TAAGCAGATAAGAGAACTTA+AGG | + | chr3_3:55449418-55449437 | Msa0459100:CDS | 30.0% | |
| ATGCTCTTCAAAAAAACTGT+TGG | + | chr3_3:55449488-55449507 | Msa0459100:CDS | 30.0% | |
| TTACTAATGTTGAGATCTGA+TGG | - | chr3_3:55449572-55449591 | None:intergenic | 30.0% | |
| !!! | TTACTTCTCACCTTTTTTGT+AGG | + | chr3_3:55449780-55449799 | Msa0459100:intron | 30.0% |
| AGTGAAGAAACCTACAAAAA+AGG | - | chr3_3:55449793-55449812 | None:intergenic | 30.0% | |
| TGGATTACTCTTCATGAATA+TGG | - | chr3_3:55449899-55449918 | None:intergenic | 30.0% | |
| ! | TGATTTGTGATTTCGTTTGA+AGG | + | chr3_3:55450099-55450118 | Msa0459100:three_prime_UTR | 30.0% |
| GATTTGTGATTTCGTTTGAA+GGG | + | chr3_3:55450100-55450119 | Msa0459100:three_prime_UTR | 30.0% | |
| ATTTGTGATTTCGTTTGAAG+GGG | + | chr3_3:55450101-55450120 | Msa0459100:three_prime_UTR | 30.0% | |
| TCTGAACGAACAAAAAACAT+TGG | + | chr3_3:55450247-55450266 | Msa0459100:three_prime_UTR | 30.0% | |
| CTGAACGAACAAAAAACATT+GGG | + | chr3_3:55450248-55450267 | Msa0459100:three_prime_UTR | 30.0% | |
| GGTGTATATGTTTAATAGCA+AGG | + | chr3_3:55450269-55450288 | Msa0459100:three_prime_UTR | 30.0% | |
| TTAACCTATGTCGGTAAAAA+TGG | + | chr3_3:55450323-55450342 | Msa0459100:three_prime_UTR | 30.0% | |
| TAACCTATGTCGGTAAAAAT+GGG | + | chr3_3:55450324-55450343 | Msa0459100:three_prime_UTR | 30.0% | |
| ! | ACAATCGTTCTTGTTTCAAA+TGG | - | chr3_3:55450405-55450424 | None:intergenic | 30.0% |
| !! | TCATCCTTTGTTGTTGAAGA+AGG | + | chr3_3:55443498-55443517 | Msa0459100:CDS | 35.0% |
| TCTTCCTTCTTCAACAACAA+AGG | - | chr3_3:55443505-55443524 | None:intergenic | 35.0% | |
| ! | TAAATCACTGTCACTTCTAC+AGG | - | chr3_3:55443606-55443625 | None:intergenic | 35.0% |
| GGTTAATCGGGTGAAAAATA+TGG | + | chr3_3:55443776-55443795 | Msa0459100:intron | 35.0% | |
| GTGTTGAAATCTATGAAGCA+CGG | + | chr3_3:55443974-55443993 | Msa0459100:intron | 35.0% | |
| CAATTTCAACCTATGAAGCA+CGG | - | chr3_3:55444160-55444179 | None:intergenic | 35.0% | |
| !!! | TTTGTACGGCTTTTGAAGTT+TGG | + | chr3_3:55444409-55444428 | Msa0459100:intron | 35.0% |
| ATATGTATATCAGCTGCATC+TGG | - | chr3_3:55444571-55444590 | None:intergenic | 35.0% | |
| TGCAGCTGATATACATATAG+AGG | + | chr3_3:55444573-55444592 | Msa0459100:CDS | 35.0% | |
| GTTCTTGTCAATACTTAGGT+TGG | + | chr3_3:55444682-55444701 | Msa0459100:intron | 35.0% | |
| !! | TTGTCAATACTTAGGTTGGT+AGG | + | chr3_3:55444686-55444705 | Msa0459100:intron | 35.0% |
| !!! | AGGTTGGTAGGAAAATTTTC+AGG | + | chr3_3:55444698-55444717 | Msa0459100:intron | 35.0% |
| !! | GTAGGAAAATTTTCAGGCTA+AGG | + | chr3_3:55444704-55444723 | Msa0459100:CDS | 35.0% |
| TGTACAATCTGTAATGTGAC+TGG | + | chr3_3:55445009-55445028 | Msa0459100:intron | 35.0% | |
| !!! | GGATGTGCAATGTTAGTTTT+TGG | - | chr3_3:55445093-55445112 | None:intergenic | 35.0% |
| TACACAATTACCTCTTCCAA+TGG | - | chr3_3:55445310-55445329 | None:intergenic | 35.0% | |
| CGAAGTGTAATAAGTTGTTC+AGG | - | chr3_3:55445612-55445631 | None:intergenic | 35.0% | |
| ! | AAGTTTTCAGCAAGCTTCAA+AGG | - | chr3_3:55445800-55445819 | None:intergenic | 35.0% |
| !!! | CTGTGTAAGTTTTCTAGTTC+TGG | + | chr3_3:55445897-55445916 | Msa0459100:intron | 35.0% |
| !!! | CGAGGGATTTTTGTCATTTT+AGG | + | chr3_3:55445988-55446007 | Msa0459100:intron | 35.0% |
| AGAAGAGCTTGATAAGATCT+TGG | + | chr3_3:55446219-55446238 | Msa0459100:CDS | 35.0% | |
| CATATCGTTAAAGAACCATG+CGG | + | chr3_3:55446258-55446277 | Msa0459100:CDS | 35.0% | |
| GACCGTAGTTCATATTTGAT+TGG | + | chr3_3:55446402-55446421 | Msa0459100:intron | 35.0% | |
| AGTTCATATTTGATTGGCAC+AGG | + | chr3_3:55446408-55446427 | Msa0459100:intron | 35.0% | |
| TCTTTCTATCACCATCATAC+TGG | - | chr3_3:55446437-55446456 | None:intergenic | 35.0% | |
| ! | TGATGGTGATAGAAAGATTG+AGG | + | chr3_3:55446440-55446459 | Msa0459100:CDS | 35.0% |
| TATGTTACAAATGCTTTGGC+CGG | + | chr3_3:55446486-55446505 | Msa0459100:CDS | 35.0% | |
| ! | ATGGAACATTCTAGCTGTAT+TGG | + | chr3_3:55446733-55446752 | Msa0459100:intron | 35.0% |
| GTAGATAACAAAGCAAAGCA+AGG | - | chr3_3:55446763-55446782 | None:intergenic | 35.0% | |
| ! | ATCTACTAGTTTGGCATTTC+AGG | + | chr3_3:55446777-55446796 | Msa0459100:intron | 35.0% |
| TTCAGAACACTTGTTCATGT+TGG | + | chr3_3:55446983-55447002 | Msa0459100:intron | 35.0% | |
| ! | TTACTTGCGAGTTTTACATG+TGG | + | chr3_3:55447022-55447041 | Msa0459100:intron | 35.0% |
| !! | CTGAGTTGAGGAACATTTTT+GGG | + | chr3_3:55447371-55447390 | Msa0459100:CDS | 35.0% |
| !!! | TTGAGGAACATTTTTGGGTT+GGG | + | chr3_3:55447376-55447395 | Msa0459100:CDS | 35.0% |
| ! | AAGGTGTTTGCGATATACTT+TGG | - | chr3_3:55447440-55447459 | None:intergenic | 35.0% |
| ATTGCACTTTGATCCACTAA+AGG | + | chr3_3:55447534-55447553 | Msa0459100:CDS | 35.0% | |
| ! | TGAATTTTACAGGCCTTTAG+TGG | - | chr3_3:55447550-55447569 | None:intergenic | 35.0% |
| ! | GTTACCTTCGTGAATTTTAC+AGG | - | chr3_3:55447560-55447579 | None:intergenic | 35.0% |
| TTGTCATGTTTACAGTTAGC+TGG | + | chr3_3:55447596-55447615 | Msa0459100:intron | 35.0% | |
| ! | TTTCAACACTTTGAGTTCTG+AGG | + | chr3_3:55447645-55447664 | Msa0459100:intron | 35.0% |
| TTGTCAATAAATGGGTGCAT+GGG | - | chr3_3:55448017-55448036 | None:intergenic | 35.0% | |
| TTTGTCAATAAATGGGTGCA+TGG | - | chr3_3:55448018-55448037 | None:intergenic | 35.0% | |
| TCAACAAACCTAAACCTATC+GGG | - | chr3_3:55448101-55448120 | None:intergenic | 35.0% | |
| GTCAACAAACCTAAACCTAT+CGG | - | chr3_3:55448102-55448121 | None:intergenic | 35.0% | |
| !!! | TAGAATGGTTTTTGGCTTCT+AGG | + | chr3_3:55448155-55448174 | Msa0459100:intron | 35.0% |
| AGAAGATAGACAAACTCTCA+TGG | - | chr3_3:55448222-55448241 | None:intergenic | 35.0% | |
| ! | ACATGGTTTGCAATTAACCA+GGG | + | chr3_3:55448586-55448605 | Msa0459100:CDS | 35.0% |
| ATTAACCAGGGAAATTGCTA+TGG | + | chr3_3:55448598-55448617 | Msa0459100:CDS | 35.0% | |
| ATCTGTCTCAAGAGAATTGT+TGG | + | chr3_3:55448644-55448663 | Msa0459100:intron | 35.0% | |
| ! | AAATTCTAAGGAGTCTGCAA+AGG | + | chr3_3:55448773-55448792 | Msa0459100:CDS | 35.0% |
| !! | GAGTTGGTGAATGACATTAA+AGG | + | chr3_3:55448837-55448856 | Msa0459100:CDS | 35.0% |
| ! | GTTGGTGAATGACATTAAAG+GGG | + | chr3_3:55448839-55448858 | Msa0459100:CDS | 35.0% |
| ATCAACTGATGAGGTTGTAA+AGG | + | chr3_3:55448875-55448894 | Msa0459100:CDS | 35.0% | |
| CAAAAACTGAAGACGAAGAA+TGG | + | chr3_3:55448907-55448926 | Msa0459100:CDS | 35.0% | |
| ! | TACTTGCTTTATTGCCTAAC+TGG | + | chr3_3:55449062-55449081 | Msa0459100:CDS | 35.0% |
| ATGTGACGAAGATTCCATTT+GGG | + | chr3_3:55449087-55449106 | Msa0459100:CDS | 35.0% | |
| ATTCCTCTTGTTAGTGATCT+GGG | - | chr3_3:55449114-55449133 | None:intergenic | 35.0% | |
| TTCTTCTAAATCAGCTTGGT+GGG | + | chr3_3:55449147-55449166 | Msa0459100:CDS | 35.0% | |
| TACCTTCTGAGCATATTCTT+CGG | - | chr3_3:55449327-55449346 | None:intergenic | 35.0% | |
| ATAAGAGAACTTAAGGAAGC+TGG | + | chr3_3:55449425-55449444 | Msa0459100:CDS | 35.0% | |
| !! | TGGTGTTGATTTAGACAACA+TGG | + | chr3_3:55449445-55449464 | Msa0459100:CDS | 35.0% |
| !!! | GTTGGTGATATTTTCTCATC+AGG | + | chr3_3:55449506-55449525 | Msa0459100:CDS | 35.0% |
| AGAAATCAAGAGTTGTTGTG+TGG | + | chr3_3:55449594-55449613 | Msa0459100:CDS | 35.0% | |
| GTTATCAAACTCACTCATTC+AGG | + | chr3_3:55449634-55449653 | Msa0459100:CDS | 35.0% | |
| ACAGAGAAATCATATAGGAG+TGG | + | chr3_3:55449673-55449692 | Msa0459100:CDS | 35.0% | |
| AGAAGAGTTTGTATTCTGAG+TGG | + | chr3_3:55450026-55450045 | Msa0459100:exon | 35.0% | |
| AGCAGATTTATACTTACCGT+TGG | + | chr3_3:55450174-55450193 | Msa0459100:three_prime_UTR | 35.0% | |
| ! | TTGGCTATCTGAAATTCCAA+CGG | - | chr3_3:55450193-55450212 | None:intergenic | 35.0% |
| AACCTATGTCGGTAAAAATG+GGG | + | chr3_3:55450325-55450344 | Msa0459100:three_prime_UTR | 35.0% | |
| ATGATGATATAACGATTGGC+AGG | + | chr3_3:55450363-55450382 | Msa0459100:three_prime_UTR | 35.0% | |
| !! | GGTAATGGAATGAGAGAAGA+AGG | - | chr3_3:55443127-55443146 | None:intergenic | 40.0% |
| ATATCGATCGAATCGCCAAT+AGG | + | chr3_3:55443524-55443543 | Msa0459100:CDS | 40.0% | |
| AAATCTATGAAGCACGGACA+AGG | + | chr3_3:55443980-55443999 | Msa0459100:intron | 40.0% | |
| TAGGTATGGTGTGAAAAAGG+AGG | + | chr3_3:55444250-55444269 | Msa0459100:intron | 40.0% | |
| !! | AACTTCTGAAATGCCTGTAC+TGG | - | chr3_3:55444866-55444885 | None:intergenic | 40.0% |
| CATCATCTTTCCTTCTACCT+TGG | + | chr3_3:55444918-55444937 | Msa0459100:CDS | 40.0% | |
| AAATACGCTTCCAAGGTAGA+AGG | - | chr3_3:55444931-55444950 | None:intergenic | 40.0% | |
| AACTGGAAAATACGCTTCCA+AGG | - | chr3_3:55444938-55444957 | None:intergenic | 40.0% | |
| CTTGACTATACACACATGCA+AGG | - | chr3_3:55445114-55445133 | None:intergenic | 40.0% | |
| ! | TCTTCCAATGGATTTCAGCT+TGG | - | chr3_3:55445298-55445317 | None:intergenic | 40.0% |
| AAGCTGAAATCCATTGGAAG+AGG | + | chr3_3:55445297-55445316 | Msa0459100:CDS | 40.0% | |
| ! | AGATCTAAAGAGCGCAAAAC+TGG | - | chr3_3:55445561-55445580 | None:intergenic | 40.0% |
| AGTTGTTCAGGGTCAATATC+TGG | - | chr3_3:55445600-55445619 | None:intergenic | 40.0% | |
| TCAGTATCGTCTATCTGATC+AGG | + | chr3_3:55445644-55445663 | Msa0459100:CDS | 40.0% | |
| ! | GCTTGCTGAAAACTTGTTCA+AGG | + | chr3_3:55445805-55445824 | Msa0459100:intron | 40.0% |
| AAACTTACACAGCTCTTGTG+CGG | - | chr3_3:55445889-55445908 | None:intergenic | 40.0% | |
| ! | TGTTGGTCCAGTTTCTTTTC+TGG | + | chr3_3:55446303-55446322 | Msa0459100:CDS | 40.0% |
| ! | GTTGGTCCAGTTTCTTTTCT+GGG | + | chr3_3:55446304-55446323 | Msa0459100:CDS | 40.0% |
| AGCTTACCCAGAAAAGAAAC+TGG | - | chr3_3:55446313-55446332 | None:intergenic | 40.0% | |
| TCATATTTGATTGGCACAGG+TGG | + | chr3_3:55446411-55446430 | Msa0459100:intron | 40.0% | |
| TGGTCGCATGGAAGATAATA+AGG | + | chr3_3:55446509-55446528 | Msa0459100:CDS | 40.0% | |
| GACTCAGAGAAACAAGGATT+AGG | - | chr3_3:55446928-55446947 | None:intergenic | 40.0% | |
| AAACGAGACTCAGAGAAACA+AGG | - | chr3_3:55446934-55446953 | None:intergenic | 40.0% | |
| ATTGCCATGAGTTAGCATTC+AGG | + | chr3_3:55447140-55447159 | Msa0459100:intron | 40.0% | |
| CTTACCTGAATGCTAACTCA+TGG | - | chr3_3:55447147-55447166 | None:intergenic | 40.0% | |
| !! | GCTGAGTTGAGGAACATTTT+TGG | + | chr3_3:55447370-55447389 | Msa0459100:CDS | 40.0% |
| !!! | GTTGAGGAACATTTTTGGGT+TGG | + | chr3_3:55447375-55447394 | Msa0459100:CDS | 40.0% |
| !! | CACCTTGCAAAAGCTTTTTC+TGG | + | chr3_3:55447454-55447473 | Msa0459100:CDS | 40.0% |
| ! | CACCAGAAAAAGCTTTTGCA+AGG | - | chr3_3:55447459-55447478 | None:intergenic | 40.0% |
| !! | CTTGCAAAAGCTTTTTCTGG+TGG | + | chr3_3:55447457-55447476 | Msa0459100:CDS | 40.0% |
| ! | TTCTGGTGGTGAGTTAGAAA+TGG | + | chr3_3:55447471-55447490 | Msa0459100:CDS | 40.0% |
| AAGGCCTGTAAAATTCACGA+AGG | + | chr3_3:55447553-55447572 | Msa0459100:CDS | 40.0% | |
| CTTGCAAGGGTCGTTTAAAA+TGG | + | chr3_3:55448458-55448477 | Msa0459100:intron | 40.0% | |
| TCATGGAAGCGATTGAATCA+GGG | + | chr3_3:55448516-55448535 | Msa0459100:CDS | 40.0% | |
| ! | CACATGGTTTGCAATTAACC+AGG | + | chr3_3:55448585-55448604 | Msa0459100:CDS | 40.0% |
| AATAGCCATAGCAATTTCCC+TGG | - | chr3_3:55448606-55448625 | None:intergenic | 40.0% | |
| ATGCTGTTATATCACACTGC+AGG | + | chr3_3:55448704-55448723 | Msa0459100:intron | 40.0% | |
| GTTATATCACACTGCAGGTA+AGG | + | chr3_3:55448709-55448728 | Msa0459100:intron | 40.0% | |
| ACGAGCTGCTGAAAATTCTA+AGG | + | chr3_3:55448761-55448780 | Msa0459100:CDS | 40.0% | |
| TGCTGATGTATCAACTGATG+AGG | + | chr3_3:55448866-55448885 | Msa0459100:CDS | 40.0% | |
| AACTGATGAGGTTGTAAAGG+AGG | + | chr3_3:55448878-55448897 | Msa0459100:CDS | 40.0% | |
| !! | GGGTTTGTTTTTCTGAGTGT+TGG | - | chr3_3:55448942-55448961 | None:intergenic | 40.0% |
| GTAAAAAAAATGGGGAAGCC+TGG | + | chr3_3:55448975-55448994 | Msa0459100:CDS | 40.0% | |
| ATGACCTTCCAGAAAGAGAT+AGG | + | chr3_3:55449021-55449040 | Msa0459100:CDS | 40.0% | |
| AGATCTGTCCTATCTCTTTC+TGG | - | chr3_3:55449032-55449051 | None:intergenic | 40.0% | |
| GATGTGACGAAGATTCCATT+TGG | + | chr3_3:55449086-55449105 | Msa0459100:CDS | 40.0% | |
| TGTGACGAAGATTCCATTTG+GGG | + | chr3_3:55449088-55449107 | Msa0459100:CDS | 40.0% | |
| CATTCCTCTTGTTAGTGATC+TGG | - | chr3_3:55449115-55449134 | None:intergenic | 40.0% | |
| GTTCTTCTAAATCAGCTTGG+TGG | + | chr3_3:55449146-55449165 | Msa0459100:CDS | 40.0% | |
| !!! | GCTGAGGTAATTTTAGCTGA+TGG | + | chr3_3:55449242-55449261 | Msa0459100:CDS | 40.0% |
| GGAGCAACTAACTAATCTTC+AGG | + | chr3_3:55449286-55449305 | Msa0459100:CDS | 40.0% | |
| GCAACTAACTAATCTTCAGG+AGG | + | chr3_3:55449289-55449308 | Msa0459100:CDS | 40.0% | |
| ACTAATCTTCAGGAGGAAGT+AGG | + | chr3_3:55449296-55449315 | Msa0459100:CDS | 40.0% | |
| ACCTTCTGAGCATATTCTTC+GGG | - | chr3_3:55449326-55449345 | None:intergenic | 40.0% | |
| ! | GATATTTTCTCATCAGGCAC+TGG | + | chr3_3:55449512-55449531 | Msa0459100:CDS | 40.0% |
| AATCATATAGGAGTGGTGAG+TGG | + | chr3_3:55449680-55449699 | Msa0459100:intron | 40.0% | |
| ! | TGCAAGCGAGTCAATTTTTC+AGG | - | chr3_3:55449925-55449944 | None:intergenic | 40.0% |
| TAGGTTAATCAAGACTGCAG+TGG | + | chr3_3:55449999-55450018 | Msa0459100:CDS | 40.0% | |
| !! | GAAGGTGTGAGAGTTGATGA+AGG | - | chr3_3:55443109-55443128 | None:intergenic | 45.0% |
| TGGATGAAGAGGGTGGTAAA+GGG | - | chr3_3:55443153-55443172 | None:intergenic | 45.0% | |
| ! | TGTCGTTTGGTGGATGAAGA+GGG | - | chr3_3:55443163-55443182 | None:intergenic | 45.0% |
| !! | TTTGAAACGGTGTCGTTTGG+TGG | - | chr3_3:55443173-55443192 | None:intergenic | 45.0% |
| !! | GAGTTTGAAACGGTGTCGTT+TGG | - | chr3_3:55443176-55443195 | None:intergenic | 45.0% |
| GAGGGAGTGAGAGTTTGAAA+CGG | - | chr3_3:55443186-55443205 | None:intergenic | 45.0% | |
| ! | TTTCATCTCGGCTCGAAGTT+CGG | + | chr3_3:55443343-55443362 | Msa0459100:CDS | 45.0% |
| AAATTCACAGCCGCAACTTG+CGG | - | chr3_3:55443454-55443473 | None:intergenic | 45.0% | |
| ! | GTCCTTAATCAGGTGTTGTG+CGG | + | chr3_3:55443917-55443936 | Msa0459100:intron | 45.0% |
| ! | TCCTTAATCAGGTGTTGTGC+GGG | + | chr3_3:55443918-55443937 | Msa0459100:intron | 45.0% |
| TGTGCGGGTGTACAAAAAGT+AGG | + | chr3_3:55443933-55443952 | Msa0459100:intron | 45.0% | |
| TGGTGTGAAAAAGGAGGATG+AGG | + | chr3_3:55444256-55444275 | Msa0459100:CDS | 45.0% | |
| TTCAGGCTAAGGCTTGAAGT+TGG | + | chr3_3:55444715-55444734 | Msa0459100:CDS | 45.0% | |
| TCAGGCTAAGGCTTGAAGTT+GGG | + | chr3_3:55444716-55444735 | Msa0459100:CDS | 45.0% | |
| !! | TTTCCAGTTCACCGATTCAC+AGG | + | chr3_3:55444949-55444968 | Msa0459100:CDS | 45.0% |
| ATACCTGTGAATCGGTGAAC+TGG | - | chr3_3:55444955-55444974 | None:intergenic | 45.0% | |
| ! | TCAGCTTGGAAGCATACAAC+CGG | - | chr3_3:55445284-55445303 | None:intergenic | 45.0% |
| GCTTCCAAGCTGAAATCCAT+TGG | + | chr3_3:55445291-55445310 | Msa0459100:CDS | 45.0% | |
| AACTTACACAGCTCTTGTGC+GGG | - | chr3_3:55445888-55445907 | None:intergenic | 45.0% | |
| ATTCATGTAGCACCCCATGT+TGG | + | chr3_3:55445936-55445955 | Msa0459100:intron | 45.0% | |
| AAGAAACTGGACCAACACCT+CGG | - | chr3_3:55446300-55446319 | None:intergenic | 45.0% | |
| ATTATCTTCCATGCGACCAC+CGG | - | chr3_3:55446508-55446527 | None:intergenic | 45.0% | |
| ATGGATCCAATCTATTGGCG+AGG | + | chr3_3:55446819-55446838 | Msa0459100:intron | 45.0% | |
| AGAAAGCCTCGCCAATAGAT+TGG | - | chr3_3:55446828-55446847 | None:intergenic | 45.0% | |
| !!! | TTTTGGGTTGGGTAAACGTG+AGG | + | chr3_3:55447387-55447406 | Msa0459100:CDS | 45.0% |
| ! | TCACCAACTGCTGAAGCTTT+TGG | - | chr3_3:55447821-55447840 | None:intergenic | 45.0% |
| !! | CTTCAGCAGTTGGTGACTAA+TGG | + | chr3_3:55447825-55447844 | Msa0459100:CDS | 45.0% |
| ! | TTGGTGACTAATGGAGAGCT+TGG | + | chr3_3:55447834-55447853 | Msa0459100:CDS | 45.0% |
| TCCTCAACACACTGTTGAAG+CGG | + | chr3_3:55447905-55447924 | Msa0459100:CDS | 45.0% | |
| GATATCTGTGGCCGTTTGTT+TGG | + | chr3_3:55447936-55447955 | Msa0459100:CDS | 45.0% | |
| ! | TAAATGGGTGCATGGGCTTT+TGG | - | chr3_3:55448010-55448029 | None:intergenic | 45.0% |
| GTCATGGAAGCGATTGAATC+AGG | + | chr3_3:55448515-55448534 | Msa0459100:CDS | 45.0% | |
| CATGGAAGCGATTGAATCAG+GGG | + | chr3_3:55448517-55448536 | Msa0459100:CDS | 45.0% | |
| TCAGTACGAAAAGCAGCACA+TGG | + | chr3_3:55448569-55448588 | Msa0459100:CDS | 45.0% | |
| TGCTATGGCTATTGCAAGCA+AGG | + | chr3_3:55448613-55448632 | Msa0459100:CDS | 45.0% | |
| ! | AGCTCGTGCACGTTTTATGT+AGG | - | chr3_3:55448748-55448767 | None:intergenic | 45.0% |
| CACTTTGGTTGTGACTGAGT+TGG | + | chr3_3:55448821-55448840 | Msa0459100:CDS | 45.0% | |
| AGAGTAATTTCCGTCTGACC+AGG | - | chr3_3:55448996-55449015 | None:intergenic | 45.0% | |
| CTGTCCTATCTCTTTCTGGA+AGG | - | chr3_3:55449028-55449047 | None:intergenic | 45.0% | |
| TCTTCGTCACATCACCAGTT+AGG | - | chr3_3:55449079-55449098 | None:intergenic | 45.0% | |
| ! | AATCAGCTTGGTGGGATTCT+CGG | + | chr3_3:55449155-55449174 | Msa0459100:CDS | 45.0% |
| ! | GTCTTGCTGAGCAAGCTTTT+AGG | + | chr3_3:55449213-55449232 | Msa0459100:CDS | 45.0% |
| ! | AGCTTTTAGGCAACAAGCTG+AGG | + | chr3_3:55449226-55449245 | Msa0459100:CDS | 45.0% |
| ! | AGCTGATGGACAGTTGACAA+AGG | + | chr3_3:55449256-55449275 | Msa0459100:CDS | 45.0% |
| TGGACAGTTGACAAAGGCAA+AGG | + | chr3_3:55449262-55449281 | Msa0459100:CDS | 45.0% | |
| ACAGTTGACAAAGGCAAAGG+TGG | + | chr3_3:55449265-55449284 | Msa0459100:CDS | 45.0% | |
| ACCCGAAGAATATGCTCAGA+AGG | + | chr3_3:55449322-55449341 | Msa0459100:CDS | 45.0% | |
| !! | TTCAATGGCAGCTGCCATTT+TGG | - | chr3_3:55449369-55449388 | None:intergenic | 45.0% |
| ! | TTGTGTCACTGCGGTTTCAA+TGG | - | chr3_3:55449384-55449403 | None:intergenic | 45.0% |
| ATTGAAACCGCAGTGACACA+AGG | + | chr3_3:55449383-55449402 | Msa0459100:CDS | 45.0% | |
| TGTGGAAGCTTGCAGAAACT+AGG | + | chr3_3:55449612-55449631 | Msa0459100:CDS | 45.0% | |
| AAACTCACTCATTCAGGCTG+TGG | + | chr3_3:55449640-55449659 | Msa0459100:CDS | 45.0% | |
| TTCACTCACAGCCACTATCA+TGG | + | chr3_3:55449842-55449861 | Msa0459100:CDS | 45.0% | |
| TCACTCACAGCCACTATCAT+GGG | + | chr3_3:55449843-55449862 | Msa0459100:CDS | 45.0% | |
| TCTGGCAATTCCCATGATAG+TGG | - | chr3_3:55449856-55449875 | None:intergenic | 45.0% | |
| ACTATCATGGGAATTGCCAG+AGG | + | chr3_3:55449855-55449874 | Msa0459100:CDS | 45.0% | |
| TAAAGATCAGCAAGCTCCTC+TGG | - | chr3_3:55449874-55449893 | None:intergenic | 45.0% | |
| !!! | CGAGTCAATTTTTCAGGAGC+TGG | - | chr3_3:55449919-55449938 | None:intergenic | 45.0% |
| GTTAATCAAGACTGCAGTGG+AGG | + | chr3_3:55450002-55450021 | Msa0459100:CDS | 45.0% | |
| TGATAGGCATATGGAACACG+TGG | + | chr3_3:55450066-55450085 | Msa0459100:three_prime_UTR | 45.0% | |
| TTCGTTTGAAGGGGAGAGAT+TGG | + | chr3_3:55450110-55450129 | Msa0459100:three_prime_UTR | 45.0% | |
| TCGTTTGAAGGGGAGAGATT+GGG | + | chr3_3:55450111-55450130 | Msa0459100:three_prime_UTR | 45.0% | |
| !! | CACCCCATTTTTACCGACAT+AGG | - | chr3_3:55450330-55450349 | None:intergenic | 45.0% |
| !!! | ATTATGTTTTTTTTTTTTAT+AGG | + | chr3_3:55448490-55448509 | Msa0459100:intron | 5.0% |
| GGTGGTAAAGGGAAGGGTAA+TGG | - | chr3_3:55443142-55443161 | None:intergenic | 50.0% | |
| GAAGAGGGTGGTAAAGGGAA+GGG | - | chr3_3:55443148-55443167 | None:intergenic | 50.0% | |
| TGAAGAGGGTGGTAAAGGGA+AGG | - | chr3_3:55443149-55443168 | None:intergenic | 50.0% | |
| GTGGATGAAGAGGGTGGTAA+AGG | - | chr3_3:55443154-55443173 | None:intergenic | 50.0% | |
| !! | GTGTCGTTTGGTGGATGAAG+AGG | - | chr3_3:55443164-55443183 | None:intergenic | 50.0% |
| TCGATTCCGGTGAGGTCTTT+GGG | - | chr3_3:55443244-55443263 | None:intergenic | 50.0% | |
| TTCGATTCCGGTGAGGTCTT+TGG | - | chr3_3:55443245-55443264 | None:intergenic | 50.0% | |
| ! | GTCGACGACGTTTTCGATTC+CGG | - | chr3_3:55443257-55443276 | None:intergenic | 50.0% |
| ! | GTTCGGTGGAAGTCGAAATG+CGG | + | chr3_3:55443360-55443379 | Msa0459100:CDS | 50.0% |
| ACCCGCACAACACCTGATTA+AGG | - | chr3_3:55443922-55443941 | None:intergenic | 50.0% | |
| ATGAAGCACGGACAAGGACA+CGG | + | chr3_3:55443986-55444005 | Msa0459100:intron | 50.0% | |
| GGATTAGGCGTGTCATGTGT+CGG | - | chr3_3:55444128-55444147 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr3_3:55444149-55444168 | None:intergenic | 50.0% | |
| TGAGGAACTTCAAGGTGACG+AGG | + | chr3_3:55444501-55444520 | Msa0459100:CDS | 50.0% | |
| TTCAAGGTGACGAGGCTGAT+AGG | + | chr3_3:55444509-55444528 | Msa0459100:CDS | 50.0% | |
| CAGGCTAAGGCTTGAAGTTG+GGG | + | chr3_3:55444717-55444736 | Msa0459100:CDS | 50.0% | |
| TGAAGTTGGGGATCGTGAAG+CGG | + | chr3_3:55444729-55444748 | Msa0459100:CDS | 50.0% | |
| AAGCGGATATTGAGCAACGC+AGG | + | chr3_3:55444746-55444765 | Msa0459100:CDS | 50.0% | |
| AGCGGATATTGAGCAACGCA+GGG | + | chr3_3:55444747-55444766 | Msa0459100:CDS | 50.0% | |
| AGCTACTTCAACCTGAAGCC+AGG | - | chr3_3:55445244-55445263 | None:intergenic | 50.0% | |
| CTATACGTGACAATGCCCAC+CGG | + | chr3_3:55445262-55445281 | Msa0459100:CDS | 50.0% | |
| ! | CTTGGAAGCATACAACCGGT+GGG | - | chr3_3:55445280-55445299 | None:intergenic | 50.0% |
| TCTACTGCTTCGCTAACTCC+AGG | - | chr3_3:55446202-55446221 | None:intergenic | 50.0% | |
| CAAAGAGATCGACATCCGCA+TGG | - | chr3_3:55446276-55446295 | None:intergenic | 50.0% | |
| AGAAACTGGACCAACACCTC+GGG | - | chr3_3:55446299-55446318 | None:intergenic | 50.0% | |
| GTTACAAATGCTTTGGCCGG+TGG | + | chr3_3:55446489-55446508 | Msa0459100:CDS | 50.0% | |
| TTCCTGCACTAGCTGAGTTG+AGG | + | chr3_3:55447359-55447378 | Msa0459100:CDS | 50.0% | |
| TTCCTCAACTCAGCTAGTGC+AGG | - | chr3_3:55447364-55447383 | None:intergenic | 50.0% | |
| ! | CCAACTGCTGAAGCTTTTGG+CGG | - | chr3_3:55447818-55447837 | None:intergenic | 50.0% |
| ! | GACTAATGGAGAGCTTGGTG+AGG | + | chr3_3:55447839-55447858 | Msa0459100:CDS | 50.0% |
| ! | TAATGGAGAGCTTGGTGAGG+AGG | + | chr3_3:55447842-55447861 | Msa0459100:CDS | 50.0% |
| GCGGCTCATTCAGATATCTG+TGG | + | chr3_3:55447924-55447943 | Msa0459100:CDS | 50.0% | |
| CTGTGGCCGTTTGTTTGGAA+AGG | + | chr3_3:55447941-55447960 | Msa0459100:CDS | 50.0% | |
| GTATATCTCCTGTGCCCGAT+AGG | + | chr3_3:55448084-55448103 | Msa0459100:intron | 50.0% | |
| AACCTAAACCTATCGGGCAC+AGG | - | chr3_3:55448095-55448114 | None:intergenic | 50.0% | |
| GCGATTGAATCAGGGGTTGA+TGG | + | chr3_3:55448524-55448543 | Msa0459100:CDS | 50.0% | |
| TTAGTGATCTGGGCCCCAAA+TGG | - | chr3_3:55449104-55449123 | None:intergenic | 50.0% | |
| AAACCGCAGTGACACAAGGA+CGG | + | chr3_3:55449387-55449406 | Msa0459100:CDS | 50.0% | |
| ACTCGCTTGCAGCATCTGTT+GGG | + | chr3_3:55449934-55449953 | Msa0459100:CDS | 50.0% | |
| ! | CGTTTGGTGGATGAAGAGGG+TGG | - | chr3_3:55443160-55443179 | None:intergenic | 55.0% |
| AGGAGGAGGATGAAGAGCGA+GGG | - | chr3_3:55443204-55443223 | None:intergenic | 55.0% | |
| ATTCCGGTGAGGTCTTTGGG+CGG | - | chr3_3:55443241-55443260 | None:intergenic | 55.0% | |
| ! | CGACGTTTTCGATTCCGGTG+AGG | - | chr3_3:55443252-55443271 | None:intergenic | 55.0% |
| ACATCCGCCGTTGTCATTGC+CGG | + | chr3_3:55443304-55443323 | Msa0459100:CDS | 55.0% | |
| ! | TACTGCGCCGGCAATGACAA+CGG | - | chr3_3:55443314-55443333 | None:intergenic | 55.0% |
| GTAGCCGCGGGATTTCATCT+CGG | + | chr3_3:55443331-55443350 | Msa0459100:CDS | 55.0% | |
| GGAAGTCGAAATGCGGCTGT+TGG | + | chr3_3:55443367-55443386 | Msa0459100:CDS | 55.0% | |
| AGTCGAAATGCGGCTGTTGG+TGG | + | chr3_3:55443370-55443389 | Msa0459100:CDS | 55.0% | |
| ! | AAATGCGGCTGTTGGTGGAG+CGG | + | chr3_3:55443375-55443394 | Msa0459100:CDS | 55.0% |
| ! | TGTTGGTGGAGCGGTTGCTT+TGG | + | chr3_3:55443384-55443403 | Msa0459100:CDS | 55.0% |
| ! | GTTGGTGGAGCGGTTGCTTT+GGG | + | chr3_3:55443385-55443404 | Msa0459100:CDS | 55.0% |
| GTCAGTGTCCATGTCGTGTC+CGG | - | chr3_3:55444015-55444034 | None:intergenic | 55.0% | |
| !! | TGTTGGTGTCGTGTCCGTGT+TGG | + | chr3_3:55444089-55444108 | Msa0459100:intron | 55.0% |
| GACACGTGTCGTGTCCAACA+CGG | - | chr3_3:55444106-55444125 | None:intergenic | 55.0% | |
| CACATGACACGCCTAATCCG+AGG | + | chr3_3:55444129-55444148 | Msa0459100:intron | 55.0% | |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | + | chr3_3:55444148-55444167 | Msa0459100:intron | 55.0% |
| GTGTCATCTGTGCTTCCTCC+TGG | + | chr3_3:55444475-55444494 | Msa0459100:CDS | 55.0% | |
| TCATCTGTGCTTCCTCCTGG+CGG | + | chr3_3:55444478-55444497 | Msa0459100:CDS | 55.0% | |
| ! | GCTTGGAAGCATACAACCGG+TGG | - | chr3_3:55445281-55445300 | None:intergenic | 55.0% |
| GATGTCGATCTCTTTGCCCG+AGG | + | chr3_3:55446280-55446299 | Msa0459100:CDS | 55.0% | |
| GATCTCTTTGCCCGAGGTGT+TGG | + | chr3_3:55446286-55446305 | Msa0459100:CDS | 55.0% | |
| CCGCCAAAAGCTTCAGCAGT+TGG | + | chr3_3:55447815-55447834 | Msa0459100:CDS | 55.0% | |
| GCCGCTTCAACAGTGTGTTG+AGG | - | chr3_3:55447909-55447928 | None:intergenic | 55.0% | |
| CTCCTGTGCCCGATAGGTTT+AGG | + | chr3_3:55448090-55448109 | Msa0459100:intron | 55.0% | |
| !! | TGGCTTCTAGGAAGCGTCAC+AGG | + | chr3_3:55448167-55448186 | Msa0459100:intron | 55.0% |
| !! | GGCTTCTAGGAAGCGTCACA+GGG | + | chr3_3:55448168-55448187 | Msa0459100:intron | 55.0% |
| !! | GCTTCTAGGAAGCGTCACAG+GGG | + | chr3_3:55448169-55448188 | Msa0459100:intron | 55.0% |
| AATGGGGAAGCCTGGTCAGA+CGG | + | chr3_3:55448983-55449002 | Msa0459100:CDS | 55.0% | |
| GGGCCCAGATCACTAACAAG+AGG | + | chr3_3:55449108-55449127 | Msa0459100:CDS | 55.0% | |
| ! | GGTGGGATTCTCGGTTTGAG+TGG | + | chr3_3:55449164-55449183 | Msa0459100:CDS | 55.0% |
| GACTCGCTTGCAGCATCTGT+TGG | + | chr3_3:55449933-55449952 | Msa0459100:CDS | 55.0% | |
| ! | CTCTTCGCGAGTTGGGATGT+AGG | + | chr3_3:55449980-55449999 | Msa0459100:CDS | 55.0% |
| ! | CGATTGGCAGGTTGCTTTGC+AGG | + | chr3_3:55450375-55450394 | Msa0459100:three_prime_UTR | 55.0% |
| GAGGAGGAGGATGAAGAGCG+AGG | - | chr3_3:55443205-55443224 | None:intergenic | 60.0% | |
| GAGGTCTTTGGGCGGAGGAA+GGG | - | chr3_3:55443233-55443252 | None:intergenic | 60.0% | |
| TGAGGTCTTTGGGCGGAGGA+AGG | - | chr3_3:55443234-55443253 | None:intergenic | 60.0% | |
| GATGTAGCGAGACGGAGTGG+TGG | - | chr3_3:55443289-55443308 | None:intergenic | 60.0% | |
| CAACGGCGGATGTAGCGAGA+CGG | - | chr3_3:55443297-55443316 | None:intergenic | 60.0% | |
| CGAGCCGAGATGAAATCCCG+CGG | - | chr3_3:55443338-55443357 | None:intergenic | 60.0% | |
| ! | CATCTCGGCTCGAAGTTCGG+TGG | + | chr3_3:55443346-55443365 | Msa0459100:CDS | 60.0% |
| ! | TGGAGCGGTTGCTTTGGGTG+TGG | + | chr3_3:55443390-55443409 | Msa0459100:CDS | 60.0% |
| ! | GTTGCTTTGGGTGTGGCTGG+TGG | + | chr3_3:55443397-55443416 | Msa0459100:CDS | 60.0% |
| ! | TTTGGGTGTGGCTGGTGGTG+CGG | + | chr3_3:55443402-55443421 | Msa0459100:CDS | 60.0% |
| ACGGACAAGGACACGGACAC+CGG | + | chr3_3:55443993-55444012 | Msa0459100:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr3_3:55444143-55444162 | None:intergenic | 60.0% | |
| TGAAGTTCCTCACCGCCAGG+AGG | - | chr3_3:55444493-55444512 | None:intergenic | 60.0% | |
| CCTTGAAGTTCCTCACCGCC+AGG | - | chr3_3:55444496-55444515 | None:intergenic | 60.0% | |
| CCTGGCGGTGAGGAACTTCA+AGG | + | chr3_3:55444493-55444512 | Msa0459100:CDS | 60.0% | |
| GGCACAGGTGGCCAGTATGA+TGG | + | chr3_3:55446423-55446442 | Msa0459100:intron | 60.0% | |
| ! | CAGCCGTCCTTGTGTCACTG+CGG | - | chr3_3:55449393-55449412 | None:intergenic | 60.0% |
| !! | AGGCACTGGAGAGTTCGACG+AGG | + | chr3_3:55449526-55449545 | Msa0459100:CDS | 60.0% |
| CACTGGAGAGTTCGACGAGG+AGG | + | chr3_3:55449529-55449548 | Msa0459100:CDS | 60.0% | |
| AGCAGCTGCTCTTCGCGAGT+TGG | + | chr3_3:55449972-55449991 | Msa0459100:CDS | 60.0% | |
| GCAGCTGCTCTTCGCGAGTT+GGG | + | chr3_3:55449973-55449992 | Msa0459100:CDS | 60.0% | |
| AGGAAGGGAGGAGGAGGAGG+AGG | - | chr3_3:55443218-55443237 | None:intergenic | 65.0% | |
| TTTGGGCGGAGGAAGGGAGG+AGG | - | chr3_3:55443227-55443246 | None:intergenic | 65.0% | |
| GTCTTTGGGCGGAGGAAGGG+AGG | - | chr3_3:55443230-55443249 | None:intergenic | 65.0% | |
| CCTCCGCCCAAAGACCTCAC+CGG | + | chr3_3:55443235-55443254 | Msa0459100:CDS | 65.0% | |
| GCGGATGTAGCGAGACGGAG+TGG | - | chr3_3:55443292-55443311 | None:intergenic | 65.0% | |
| ! | TGCGCCGGCAATGACAACGG+CGG | - | chr3_3:55443311-55443330 | None:intergenic | 65.0% |
| AAATCCCGCGGCTACTGCGC+CGG | - | chr3_3:55443326-55443345 | None:intergenic | 65.0% | |
| ! | GCGGTTGCTTTGGGTGTGGC+TGG | + | chr3_3:55443394-55443413 | Msa0459100:CDS | 65.0% |
| TGCCCTAGCGCCGCAAGTTG+CGG | + | chr3_3:55443441-55443460 | Msa0459100:CDS | 65.0% | |
| AGCCGCAACTTGCGGCGCTA+GGG | - | chr3_3:55443446-55443465 | None:intergenic | 65.0% | |
| CACGGACACCGGACACGACA+TGG | + | chr3_3:55444004-55444023 | Msa0459100:intron | 65.0% | |
| TGTGCTTCCTCCTGGCGGTG+AGG | + | chr3_3:55444483-55444502 | Msa0459100:CDS | 65.0% | |
| TGCTTTGGCCGGTGGTCGCA+TGG | + | chr3_3:55446497-55446516 | Msa0459100:CDS | 65.0% | |
| CTCGCGAAGAGCAGCTGCTG+TGG | - | chr3_3:55449971-55449990 | None:intergenic | 65.0% | |
| CGGAGGAAGGGAGGAGGAGG+AGG | - | chr3_3:55443221-55443240 | None:intergenic | 70.0% | |
| CCGGTGAGGTCTTTGGGCGG+AGG | - | chr3_3:55443238-55443257 | None:intergenic | 70.0% | |
| CATTGCCGGCGCAGTAGCCG+CGG | + | chr3_3:55443318-55443337 | Msa0459100:CDS | 70.0% | |
| ATTGCCGGCGCAGTAGCCGC+GGG | + | chr3_3:55443319-55443338 | Msa0459100:CDS | 70.0% | |
| CAGCCGCAACTTGCGGCGCT+AGG | - | chr3_3:55443447-55443466 | None:intergenic | 70.0% | |
| GGGCGGAGGAAGGGAGGAGG+AGG | - | chr3_3:55443224-55443243 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 55443078 | 55450437 | 55443078 | ID=Msa0459100;Name=Msa0459100 |
| chr3_3 | mRNA | 55443078 | 55450437 | 55443078 | ID=Msa0459100-mRNA-1;Parent=Msa0459100;Name=Msa0459100-mRNA-1;_AED=0.06;_eAED=0.06;_QI=22|1|0.86|1|1|1|15|393|987 |
| chr3_3 | exon | 55443078 | 55443545 | 55443078 | ID=Msa0459100-mRNA-1:exon:10979;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55444253 | 55444312 | 55444253 | ID=Msa0459100-mRNA-1:exon:10980;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55444471 | 55444594 | 55444471 | ID=Msa0459100-mRNA-1:exon:10981;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55444700 | 55444768 | 55444700 | ID=Msa0459100-mRNA-1:exon:10982;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55444872 | 55444970 | 55444872 | ID=Msa0459100-mRNA-1:exon:10983;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55445252 | 55445318 | 55445252 | ID=Msa0459100-mRNA-1:exon:10984;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55445601 | 55445665 | 55445601 | ID=Msa0459100-mRNA-1:exon:10985;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55445806 | 55445900 | 55445806 | ID=Msa0459100-mRNA-1:exon:10986;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55446198 | 55446325 | 55446198 | ID=Msa0459100-mRNA-1:exon:10987;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55446430 | 55446530 | 55446430 | ID=Msa0459100-mRNA-1:exon:10988;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55447358 | 55447574 | 55447358 | ID=Msa0459100-mRNA-1:exon:10989;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55447808 | 55447962 | 55447808 | ID=Msa0459100-mRNA-1:exon:10990;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55448512 | 55448637 | 55448512 | ID=Msa0459100-mRNA-1:exon:10991;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55448726 | 55449694 | 55448726 | ID=Msa0459100-mRNA-1:exon:10992;Parent=Msa0459100-mRNA-1 |
| chr3_3 | exon | 55449802 | 55450437 | 55449802 | ID=Msa0459100-mRNA-1:exon:10993;Parent=Msa0459100-mRNA-1 |
| chr3_3 | five_prime_UTR | 55443078 | 55443099 | 55443078 | ID=Msa0459100-mRNA-1:five_prime_utr;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55443100 | 55443545 | 55443100 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55444253 | 55444312 | 55444253 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55444471 | 55444594 | 55444471 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55444700 | 55444768 | 55444700 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55444872 | 55444970 | 55444872 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55445252 | 55445318 | 55445252 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55445601 | 55445665 | 55445601 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55445806 | 55445900 | 55445806 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55446198 | 55446325 | 55446198 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55446430 | 55446530 | 55446430 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55447358 | 55447574 | 55447358 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55447808 | 55447962 | 55447808 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55448512 | 55448637 | 55448512 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55448726 | 55449694 | 55448726 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | CDS | 55449802 | 55450044 | 55449802 | ID=Msa0459100-mRNA-1:cds;Parent=Msa0459100-mRNA-1 |
| chr3_3 | three_prime_UTR | 55450045 | 55450437 | 55450045 | ID=Msa0459100-mRNA-1:three_prime_utr;Parent=Msa0459100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
