Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463860 | XP_003601009.1 | 97.419 | 155 | 4 | 0 | 1 | 155 | 1 | 155 | 8.34e-107 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463860 | G7J2F5 | 97.419 | 155 | 4 | 0 | 1 | 155 | 1 | 155 | 3.98e-107 | 311 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030380 | Msa0463860 | 0.802733 | 4.877926e-49 | -8.615850e-47 |
| Msa0032610 | Msa0463860 | 0.820958 | 5.208600e-53 | -8.615850e-47 |
| Msa0044710 | Msa0463860 | 0.808698 | 2.725750e-50 | -8.615850e-47 |
| Msa0111310 | Msa0463860 | 0.800459 | 1.427170e-48 | -8.615850e-47 |
| Msa0142420 | Msa0463860 | 0.823961 | 1.044847e-53 | -8.615850e-47 |
| Msa0148120 | Msa0463860 | 0.805511 | 1.288565e-49 | -8.615850e-47 |
| Msa0173740 | Msa0463860 | 0.806996 | 6.271854e-50 | -8.615850e-47 |
| Msa0173820 | Msa0463860 | 0.803351 | 3.633873e-49 | -8.615850e-47 |
| Msa0200950 | Msa0463860 | -0.801151 | 1.030999e-48 | -8.615850e-47 |
| Msa0379410 | Msa0463860 | 0.807191 | 5.702128e-50 | -8.615850e-47 |
| Msa0380040 | Msa0463860 | 0.816899 | 4.359254e-52 | -8.615850e-47 |
| Msa0429290 | Msa0463860 | 0.817258 | 3.620344e-52 | -8.615850e-47 |
| Msa0462590 | Msa0463860 | 0.827148 | 1.835524e-54 | -8.615850e-47 |
| Msa0463860 | Msa0467920 | -0.810250 | 1.265372e-50 | -8.615850e-47 |
| Msa0463860 | Msa0475580 | 0.820089 | 8.245653e-53 | -8.615850e-47 |
| Msa0463860 | Msa0519220 | 0.822724 | 2.032614e-53 | -8.615850e-47 |
| Msa0463860 | Msa0540070 | 0.804434 | 2.164267e-49 | -8.615850e-47 |
| Msa0463860 | Msa0553220 | -0.804822 | 1.796245e-49 | -8.615850e-47 |
| Msa0463860 | Msa0579290 | 0.824054 | 9.936261e-54 | -8.615850e-47 |
| Msa0463860 | Msa0579390 | 0.820747 | 5.823826e-53 | -8.615850e-47 |
| Msa0463860 | Msa0638280 | 0.814138 | 1.794410e-51 | -8.615850e-47 |
| Msa0463860 | Msa0638320 | 0.812834 | 3.473754e-51 | -8.615850e-47 |
| Msa0463860 | Msa0677270 | 0.806488 | 8.027490e-50 | -8.615850e-47 |
| Msa0463860 | Msa0705420 | 0.817250 | 3.635867e-52 | -8.615850e-47 |
| Msa0463860 | Msa0743650 | 0.800118 | 1.674265e-48 | -8.615850e-47 |
| Msa0463860 | Msa0828570 | 0.817303 | 3.536293e-52 | -8.615850e-47 |
| Msa0463860 | Msa0863770 | 0.800219 | 1.597086e-48 | -8.615850e-47 |
| Msa0463860 | Msa0874500 | 0.803600 | 3.226581e-49 | -8.615850e-47 |
| Msa0463860 | Msa1077670 | 0.809306 | 2.020037e-50 | -8.615850e-47 |
| Msa0463860 | Msa1315110 | 0.800811 | 1.209883e-48 | -8.615850e-47 |
| Msa0463860 | Msa1391490 | 0.825252 | 5.188091e-54 | -8.615850e-47 |
| Msa0463860 | Msa1398800 | 0.823269 | 1.516640e-53 | -8.615850e-47 |
| Msa0463860 | Msa1427830 | 0.811768 | 5.935234e-51 | -8.615850e-47 |
| Msa0463860 | Msa1454110 | 0.801258 | 9.799208e-49 | -8.615850e-47 |
| Msa0463860 | Msa1461250 | -0.810010 | 1.425802e-50 | -8.615850e-47 |
| Msa0288330 | Msa0463860 | 0.816684 | 4.872194e-52 | -8.615850e-47 |
| Msa0320100 | Msa0463860 | 0.809631 | 1.720310e-50 | -8.615850e-47 |
| Msa0326670 | Msa0463860 | 0.812244 | 4.674040e-51 | -8.615850e-47 |
| Msa0358170 | Msa0463860 | 0.815457 | 9.155883e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463860 | MtrunA17_Chr3g0114281 | 97.419 | 155 | 4 | 0 | 1 | 155 | 1 | 155 | 7.67e-111 | 311 |
| Msa0463860 | MtrunA17_Chr0c32g0494171 | 62.921 | 89 | 33 | 0 | 66 | 154 | 12 | 100 | 9.69e-39 | 127 |
| Msa0463860 | MtrunA17_Chr7g0243961 | 62.921 | 89 | 33 | 0 | 66 | 154 | 12 | 100 | 9.69e-39 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463860 | AT5G05360.1 | 43.976 | 166 | 76 | 4 | 1 | 152 | 1 | 163 | 8.73e-41 | 134 |
| Msa0463860 | AT5G05360.2 | 43.137 | 153 | 70 | 4 | 1 | 139 | 1 | 150 | 4.67e-35 | 120 |
| Msa0463860 | AT2G38450.1 | 60.494 | 81 | 32 | 0 | 67 | 147 | 55 | 135 | 7.61e-32 | 111 |
| Msa0463860 | AT2G38450.2 | 59.184 | 49 | 20 | 0 | 67 | 115 | 55 | 103 | 9.53e-16 | 69.7 |
Find 53 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACACTTCCTCTTCATTAA+AGG | 0.188711 | 3_3:+63409254 | None:intergenic |
| AGTGCGGTCTTGTTGTTTCT+TGG | 0.311175 | 3_3:+63413056 | None:intergenic |
| CTAGAAATTGTTACAATTTG+AGG | 0.317436 | 3_3:+63413299 | None:intergenic |
| GATACGGGTTGGGTTTGTTT+TGG | 0.339121 | 3_3:+63413108 | None:intergenic |
| CAAATGTATTGCTCTGGATA+TGG | 0.370151 | 3_3:-63412880 | Msa0463860:CDS |
| TCCACAGGCTCCACCTTCTT+CGG | 0.388108 | 3_3:+63413012 | None:intergenic |
| CTTTCCAGTCAAGTTCTTGT+TGG | 0.400775 | 3_3:-63412904 | Msa0463860:CDS |
| CAAGAAGTCGAAATTCAGTT+TGG | 0.410256 | 3_3:-63411623 | Msa0463860:CDS |
| GTGGTTTCACGATACGCTTA+AGG | 0.417498 | 3_3:-63412944 | Msa0463860:CDS |
| ACTGGAAAGATCCCCACGTT+TGG | 0.427172 | 3_3:+63412918 | None:intergenic |
| CTGGTTCAATGATACGGGTT+GGG | 0.430102 | 3_3:+63413098 | None:intergenic |
| CAATGCAGCAAACTCATAGA+AGG | 0.439012 | 3_3:+63409226 | None:intergenic |
| TGGTTCGTGCAGCGATGAAC+TGG | 0.442996 | 3_3:+63413079 | None:intergenic |
| ACAAGACCGCACTGTTGTTA+AGG | 0.443164 | 3_3:-63413046 | Msa0463860:CDS |
| AAACTCGAATAGCTCTTTCC+AGG | 0.469121 | 3_3:-63412990 | Msa0463860:CDS |
| TTGACCAACAAGAACTTGAC+TGG | 0.477469 | 3_3:+63412900 | None:intergenic |
| TGATTCGGATTCAAGTGAAA+TGG | 0.478803 | 3_3:-63411482 | Msa0463860:CDS |
| GTTGGTCAAATGTATTGCTC+TGG | 0.481330 | 3_3:-63412886 | Msa0463860:CDS |
| GTATCCTTAACTCTCTTCAT+CGG | 0.497537 | 3_3:-63409305 | Msa0463860:three_prime_UTR |
| TACTTAGTTTGTAAGTATGA+AGG | 0.501423 | 3_3:-63411446 | Msa0463860:intron |
| AGGTTATAGAGCAAGTGATT+CGG | 0.501656 | 3_3:-63411497 | Msa0463860:CDS |
| TATCCTTAACTCTCTTCATC+GGG | 0.513073 | 3_3:-63409304 | Msa0463860:three_prime_UTR |
| GATGAACTGGTTCAATGATA+CGG | 0.513998 | 3_3:+63413092 | None:intergenic |
| CCGCCCGATGAAGAGAGTTA+AGG | 0.516752 | 3_3:+63409301 | None:intergenic |
| GCGGTCTTGTTGTTTCTTGG+TGG | 0.525060 | 3_3:+63413059 | None:intergenic |
| GGTGGAATCGCCGCCGAAGA+AGG | 0.532810 | 3_3:-63413025 | Msa0463860:CDS |
| TTCTTGTCGCACAGAGTCAA+AGG | 0.533961 | 3_3:+63413170 | None:intergenic |
| AAACCACCGATGAGTGCAAT+CGG | 0.533991 | 3_3:+63412960 | None:intergenic |
| ATGAACTGGTTCAATGATAC+GGG | 0.546395 | 3_3:+63413093 | None:intergenic |
| CGCTTAAGGAGGCCAAACGT+GGG | 0.554828 | 3_3:-63412930 | Msa0463860:CDS |
| TGTTTCTAGAAATCCTCAAA+AGG | 0.559783 | 3_3:-63412857 | Msa0463860:intron |
| ACGCTTAAGGAGGCCAAACG+TGG | 0.562570 | 3_3:-63412931 | Msa0463860:CDS |
| ACTGGTTCAATGATACGGGT+TGG | 0.564172 | 3_3:+63413097 | None:intergenic |
| CATCACTGCCTTTAATGAAG+AGG | 0.564259 | 3_3:-63409262 | Msa0463860:three_prime_UTR |
| ATGAAATGAGAAGATGAAGC+TGG | 0.566260 | 3_3:+63413231 | None:intergenic |
| TGGTTGCCGATTGCACTCAT+CGG | 0.567470 | 3_3:-63412966 | Msa0463860:CDS |
| ACAGATATTATCAAACATGT+AGG | 0.570126 | 3_3:+63413270 | None:intergenic |
| GCCGAAGAAGGTGGAGCCTG+TGG | 0.572829 | 3_3:-63413013 | Msa0463860:CDS |
| AGAGCTATTCGAGTTTCCAC+AGG | 0.573631 | 3_3:+63412997 | None:intergenic |
| TGTAAGTAGCTGTGTTGCAA+TGG | 0.582459 | 3_3:-63409111 | Msa0463860:three_prime_UTR |
| AGTGCAATCGGCAACCACCC+TGG | 0.583008 | 3_3:+63412972 | None:intergenic |
| GGAATCGCCGCCGAAGAAGG+TGG | 0.584881 | 3_3:-63413022 | Msa0463860:CDS |
| TTGCCGATTGCACTCATCGG+TGG | 0.591814 | 3_3:-63412963 | Msa0463860:CDS |
| AACTCGAATAGCTCTTTCCA+GGG | 0.616905 | 3_3:-63412989 | Msa0463860:CDS |
| TTCGGATTCAAGTGAAATGG+AGG | 0.617025 | 3_3:-63411479 | Msa0463860:CDS |
| TGTGTTTATAGGGACATGCA+TGG | 0.630942 | 3_3:-63411659 | Msa0463860:intron |
| GTTTCACGATACGCTTAAGG+AGG | 0.639685 | 3_3:-63412941 | Msa0463860:CDS |
| AGACCGCACTGTTGTTAAGG+TGG | 0.642343 | 3_3:-63413043 | Msa0463860:CDS |
| CCTTAACTCTCTTCATCGGG+CGG | 0.646767 | 3_3:-63409301 | Msa0463860:three_prime_UTR |
| ACAGGCTCCACCTTCTTCGG+CGG | 0.656515 | 3_3:+63413015 | None:intergenic |
| GCTTAAGGAGGCCAAACGTG+GGG | 0.679928 | 3_3:-63412929 | Msa0463860:CDS |
| TCGAATAGCTCTTTCCAGGG+TGG | 0.692357 | 3_3:-63412986 | Msa0463860:CDS |
| ATTCCACCTTAACAACAGTG+CGG | 0.796242 | 3_3:+63413040 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATATGCTCTAAATAA+TGG | - | chr3_3:63411348-63411367 | Msa0463860:intron | 15.0% |
| !!! | ATAGAAAAAATGGTATTTTT+AGG | + | chr3_3:63412609-63412628 | None:intergenic | 15.0% |
| !!! | AAAATACCATTTTTTCTATA+AGG | - | chr3_3:63412610-63412629 | Msa0463860:intron | 15.0% |
| !! | CATTATTAGAAATATAAATC+AGG | + | chr3_3:63412989-63413008 | None:intergenic | 15.0% |
| !! | TCATAATTCATAAGACATTT+GGG | - | chr3_3:63409717-63409736 | Msa0463860:intron | 20.0% |
| !!! | TTAGCAACAATTTGATTTTA+TGG | - | chr3_3:63409842-63409861 | Msa0463860:intron | 20.0% |
| !! | TTGGATTAACAACTTAATTA+AGG | + | chr3_3:63409980-63409999 | None:intergenic | 20.0% |
| !! | CTCAACAATTATAACAAAAA+GGG | + | chr3_3:63410143-63410162 | None:intergenic | 20.0% |
| !! | ACTCAACAATTATAACAAAA+AGG | + | chr3_3:63410144-63410163 | None:intergenic | 20.0% |
| !! | TTGTTATCTACTTTCAAATA+TGG | - | chr3_3:63410522-63410541 | Msa0463860:intron | 20.0% |
| !!! | TTTTGTTGTAATTCAAATTC+TGG | - | chr3_3:63410577-63410596 | Msa0463860:intron | 20.0% |
| !! | ATTGACGGTAAAATATTATA+CGG | + | chr3_3:63410604-63410623 | None:intergenic | 20.0% |
| !! | AAACAAAATAAGAAACAATC+AGG | + | chr3_3:63410914-63410933 | None:intergenic | 20.0% |
| !!! | TTCTTATTTTGTTTACATAC+AGG | - | chr3_3:63410920-63410939 | Msa0463860:intron | 20.0% |
| !! | ATGAGCATAATAAATATACA+AGG | + | chr3_3:63411271-63411290 | None:intergenic | 20.0% |
| !!! | AATTTGAAGCTTTAAGAAAA+AGG | + | chr3_3:63411318-63411337 | None:intergenic | 20.0% |
| !! | TAGTATAATTCTCAATTCTT+TGG | - | chr3_3:63411422-63411441 | Msa0463860:intron | 20.0% |
| !!! | AGTCTTATTAAACATTATCA+GGG | + | chr3_3:63411858-63411877 | None:intergenic | 20.0% |
| !!! | AAGTCTTATTAAACATTATC+AGG | + | chr3_3:63411859-63411878 | None:intergenic | 20.0% |
| !! | AATACCATCAAAATATGAAT+TGG | - | chr3_3:63412169-63412188 | Msa0463860:intron | 20.0% |
| !!! | TTAACCAATTCATATTTTGA+TGG | + | chr3_3:63412176-63412195 | None:intergenic | 20.0% |
| !! | CTAATTCCTTATAGAAAAAA+TGG | + | chr3_3:63412619-63412638 | None:intergenic | 20.0% |
| !!! | CATTTTTTCTATAAGGAATT+AGG | - | chr3_3:63412617-63412636 | Msa0463860:intron | 20.0% |
| !!! | AATGGTTTATTTTTATTCCA+GGG | + | chr3_3:63412643-63412662 | None:intergenic | 20.0% |
| !!! | AAATGGTTTATTTTTATTCC+AGG | + | chr3_3:63412644-63412663 | None:intergenic | 20.0% |
| !! | AACCATTTAGTATAACTAAA+TGG | - | chr3_3:63412656-63412675 | Msa0463860:intron | 20.0% |
| !! | TTATCATTAATGATTGAACT+CGG | + | chr3_3:63412736-63412755 | None:intergenic | 20.0% |
| !! | AAAAGAATGACGTATATTAT+TGG | - | chr3_3:63412757-63412776 | Msa0463860:intron | 20.0% |
| !!! | TCTTTAAGGTTTTAATATAG+AGG | - | chr3_3:63412963-63412982 | Msa0463860:CDS | 20.0% |
| ! | CTAGAAATTGTTACAATTTG+AGG | + | chr3_3:63409141-63409160 | None:intergenic | 25.0% |
| ! | ACAGATATTATCAAACATGT+AGG | + | chr3_3:63409170-63409189 | None:intergenic | 25.0% |
| !!! | TCTTGTCTTGTTTATTTTCA+TGG | - | chr3_3:63409238-63409257 | Msa0463860:three_prime_UTR | 25.0% |
| ! | ACACTAATGTGAAATGATAT+AGG | - | chr3_3:63409660-63409679 | Msa0463860:intron | 25.0% |
| ! | CACTAATGTGAAATGATATA+GGG | - | chr3_3:63409661-63409680 | Msa0463860:intron | 25.0% |
| ! | GACTTATTTAAGCTTATCTA+CGG | - | chr3_3:63409694-63409713 | Msa0463860:intron | 25.0% |
| ! | GTCATAATTCATAAGACATT+TGG | - | chr3_3:63409716-63409735 | Msa0463860:intron | 25.0% |
| !!! | TACTTTTGTTATGTCATGTT+TGG | + | chr3_3:63409999-63410018 | None:intergenic | 25.0% |
| ! | CAATATTGGAATCAAATTGT+CGG | + | chr3_3:63410031-63410050 | None:intergenic | 25.0% |
| ! | AGTGAAGAATAACACAATAT+TGG | + | chr3_3:63410045-63410064 | None:intergenic | 25.0% |
| ! | ACAAGGCATATATAATACTA+CGG | + | chr3_3:63410313-63410332 | None:intergenic | 25.0% |
| ! | ATTAGTACTTGAGTGAATTA+GGG | + | chr3_3:63410347-63410366 | None:intergenic | 25.0% |
| ! | TATTAGTACTTGAGTGAATT+AGG | + | chr3_3:63410348-63410367 | None:intergenic | 25.0% |
| ! | TTCACTCAAGTACTAATATA+TGG | - | chr3_3:63410350-63410369 | Msa0463860:intron | 25.0% |
| ! | AGTACTAATATATGGAACTA+TGG | - | chr3_3:63410358-63410377 | Msa0463860:intron | 25.0% |
| ! | TGTTACAAACTGTGTTTATA+GGG | - | chr3_3:63410768-63410787 | Msa0463860:intron | 25.0% |
| !!! | TACTTAGTTTGTAAGTATGA+AGG | - | chr3_3:63410991-63411010 | Msa0463860:intron | 25.0% |
| !! | TTGCTTGTTCTTATTTACTT+CGG | - | chr3_3:63411111-63411130 | Msa0463860:intron | 25.0% |
| ! | GAACAGCTAAATTTAAAGAA+TGG | + | chr3_3:63411193-63411212 | None:intergenic | 25.0% |
| !! | TTTTCGATTATTATACGACA+AGG | + | chr3_3:63411235-63411254 | None:intergenic | 25.0% |
| !! | ATTATACTAGATGAAAGCAT+CGG | + | chr3_3:63411411-63411430 | None:intergenic | 25.0% |
| ! | AAACCAAATACAACCAAAAT+AGG | + | chr3_3:63411633-63411652 | None:intergenic | 25.0% |
| !! | GTATGATCATAAGCTTTAAT+CGG | - | chr3_3:63411721-63411740 | Msa0463860:intron | 25.0% |
| !!! | ATTTGGATTGTTTTATGTCT+AGG | - | chr3_3:63411799-63411818 | Msa0463860:intron | 25.0% |
| !!! | TCATATTTTGATGGTATTTC+TGG | + | chr3_3:63412167-63412186 | None:intergenic | 25.0% |
| ! | CAAATGCTTAAATACGTTTA+AGG | - | chr3_3:63412388-63412407 | Msa0463860:intron | 25.0% |
| ! | CTAAGTAATAGCATGAAAAA+AGG | + | chr3_3:63412530-63412549 | None:intergenic | 25.0% |
| !! | TTAAAACCTTAAAGAGTACA+TGG | + | chr3_3:63412958-63412977 | None:intergenic | 25.0% |
| !! | TGTTTCTAGAAATCCTCAAA+AGG | - | chr3_3:63409580-63409599 | Msa0463860:intron | 30.0% |
| ! | GAAAAAAAACAGACCTTTTG+AGG | + | chr3_3:63409596-63409615 | None:intergenic | 30.0% |
| ATTAGTGTGTGTAAGTGTAA+TGG | + | chr3_3:63409648-63409667 | None:intergenic | 30.0% | |
| ! | ATAAGACATTTGGGATTGTT+TGG | - | chr3_3:63409726-63409745 | Msa0463860:intron | 30.0% |
| ! | TAAGACATTTGGGATTGTTT+GGG | - | chr3_3:63409727-63409746 | Msa0463860:intron | 30.0% |
| ! | AAGTCTTATCTCACTAAGTT+GGG | + | chr3_3:63409891-63409910 | None:intergenic | 30.0% |
| ATAACACAAATCGCAAACAA+TGG | + | chr3_3:63410450-63410469 | None:intergenic | 30.0% | |
| ! | TTTTACCGTCAATTGCATTT+TGG | - | chr3_3:63410611-63410630 | Msa0463860:intron | 30.0% |
| ! | TTTACCGTCAATTGCATTTT+GGG | - | chr3_3:63410612-63410631 | Msa0463860:intron | 30.0% |
| AACCAATAAGTTTATGAGCA+GGG | + | chr3_3:63410728-63410747 | None:intergenic | 30.0% | |
| GTGTTACAAACTGTGTTTAT+AGG | - | chr3_3:63410767-63410786 | Msa0463860:intron | 30.0% | |
| GTTTGTAAGTATGAAGGTAA+TGG | - | chr3_3:63410997-63411016 | Msa0463860:intron | 30.0% | |
| AATTAAGTAGAACAATTGCC+CGG | + | chr3_3:63411165-63411184 | None:intergenic | 30.0% | |
| ATACTAACCTGTAGTATGAT+TGG | - | chr3_3:63411527-63411546 | Msa0463860:intron | 30.0% | |
| TCACTATTGTAAGTCCTTAA+GGG | - | chr3_3:63411749-63411768 | Msa0463860:intron | 30.0% | |
| ACGCTTAAATATCATCTTGT+TGG | + | chr3_3:63411914-63411933 | None:intergenic | 30.0% | |
| ATTTAAGCGTATTTGCCTTA+TGG | - | chr3_3:63411924-63411943 | Msa0463860:intron | 30.0% | |
| TTTAAGCGTATTTGCCTTAT+GGG | - | chr3_3:63411925-63411944 | Msa0463860:intron | 30.0% | |
| TCGATTGAACAAAATGATGT+TGG | - | chr3_3:63411975-63411994 | Msa0463860:intron | 30.0% | |
| TAGACAACGACATATTAACA+AGG | + | chr3_3:63412015-63412034 | None:intergenic | 30.0% | |
| TGTTAATATGTCGTTGTCTA+AGG | - | chr3_3:63412015-63412034 | Msa0463860:intron | 30.0% | |
| TTGCTTCAAACATACATGTT+TGG | - | chr3_3:63412228-63412247 | Msa0463860:intron | 30.0% | |
| ! | GCTTAAATACGTTTAAGGTT+AGG | - | chr3_3:63412393-63412412 | Msa0463860:intron | 30.0% |
| ATAAGAATCTAGTGAAGTCT+AGG | - | chr3_3:63412471-63412490 | Msa0463860:intron | 30.0% | |
| ATAGCATGAAAAAAGGCAAT+AGG | + | chr3_3:63412523-63412542 | None:intergenic | 30.0% | |
| TTCATGCTATTACTTAGCTT+TGG | - | chr3_3:63412533-63412552 | Msa0463860:intron | 30.0% | |
| ! | TCATGCTATTACTTAGCTTT+GGG | - | chr3_3:63412534-63412553 | Msa0463860:intron | 30.0% |
| CGCCATTTAGTTATACTAAA+TGG | + | chr3_3:63412661-63412680 | None:intergenic | 30.0% | |
| CTAAATGGCGTATATAAATG+TGG | - | chr3_3:63412671-63412690 | Msa0463860:intron | 30.0% | |
| ! | AAATGCTCTACTTTGAAGAT+TGG | - | chr3_3:63412795-63412814 | Msa0463860:intron | 30.0% |
| ! | GCTTTTATCTCTCATAAAAC+AGG | - | chr3_3:63412861-63412880 | Msa0463860:CDS | 30.0% |
| AAACACTTCCTCTTCATTAA+AGG | + | chr3_3:63413186-63413205 | None:intergenic | 30.0% | |
| ATGAAATGAGAAGATGAAGC+TGG | + | chr3_3:63409209-63409228 | None:intergenic | 35.0% | |
| ! | ATGAACTGGTTCAATGATAC+GGG | + | chr3_3:63409347-63409366 | None:intergenic | 35.0% |
| ! | GATGAACTGGTTCAATGATA+CGG | + | chr3_3:63409348-63409367 | None:intergenic | 35.0% |
| ! | CAAATGTATTGCTCTGGATA+TGG | - | chr3_3:63409557-63409576 | Msa0463860:intron | 35.0% |
| ! | CGTTTTCAGCTTATTTCAGT+AGG | - | chr3_3:63409790-63409809 | Msa0463860:intron | 35.0% |
| ! | CAAGTCTTATCTCACTAAGT+TGG | + | chr3_3:63409892-63409911 | None:intergenic | 35.0% |
| ! | TGTGTTATTCTTCACTGCTT+TGG | - | chr3_3:63410049-63410068 | Msa0463860:intron | 35.0% |
| ! | AAGAAAATTTTCCAACCTCC+CGG | + | chr3_3:63410101-63410120 | None:intergenic | 35.0% |
| TCATACACAGACACAAAAGA+AGG | - | chr3_3:63410169-63410188 | Msa0463860:intron | 35.0% | |
| CATACACAGACACAAAAGAA+GGG | - | chr3_3:63410170-63410189 | Msa0463860:intron | 35.0% | |
| TTAGGGTTTACAGTACTACA+AGG | + | chr3_3:63410330-63410349 | None:intergenic | 35.0% | |
| AGAACCCAAAATGCAATTGA+CGG | + | chr3_3:63410619-63410638 | None:intergenic | 35.0% | |
| TTCCCTGCTCATAAACTTAT+TGG | - | chr3_3:63410723-63410742 | Msa0463860:intron | 35.0% | |
| GAACCAATAAGTTTATGAGC+AGG | + | chr3_3:63410729-63410748 | None:intergenic | 35.0% | |
| ACACAGTTTGTAACACAGTA+TGG | + | chr3_3:63410763-63410782 | None:intergenic | 35.0% | |
| CAAGAAGTCGAAATTCAGTT+TGG | - | chr3_3:63410814-63410833 | Msa0463860:intron | 35.0% | |
| AGGTTATAGAGCAAGTGATT+CGG | - | chr3_3:63410940-63410959 | Msa0463860:intron | 35.0% | |
| ! | TGATTCGGATTCAAGTGAAA+TGG | - | chr3_3:63410955-63410974 | Msa0463860:intron | 35.0% |
| CATAGTTGAATCTTGTTGAC+CGG | - | chr3_3:63411143-63411162 | Msa0463860:intron | 35.0% | |
| ATAGTTGAATCTTGTTGACC+GGG | - | chr3_3:63411144-63411163 | Msa0463860:intron | 35.0% | |
| GGGCAATTGTTCTACTTAAT+TGG | - | chr3_3:63411164-63411183 | Msa0463860:intron | 35.0% | |
| TTAGCTGTTCATTTCCACAA+AGG | - | chr3_3:63411203-63411222 | Msa0463860:intron | 35.0% | |
| AAACAAAACAACACTCGTCT+AGG | + | chr3_3:63411295-63411314 | None:intergenic | 35.0% | |
| ATAATGGTTACCCTCTATCT+AGG | - | chr3_3:63411364-63411383 | Msa0463860:intron | 35.0% | |
| CTAACATAGTCCTAGATAGA+GGG | + | chr3_3:63411377-63411396 | None:intergenic | 35.0% | |
| ACTAACATAGTCCTAGATAG+AGG | + | chr3_3:63411378-63411397 | None:intergenic | 35.0% | |
| TCATACTACAGGTTAGTATC+AGG | + | chr3_3:63411526-63411545 | None:intergenic | 35.0% | |
| CTGTAGTATGATTGGTATCT+GGG | - | chr3_3:63411535-63411554 | Msa0463860:intron | 35.0% | |
| ATCTGGGTGTATTCAGTATT+AGG | - | chr3_3:63411551-63411570 | Msa0463860:intron | 35.0% | |
| !!! | GCACCTATTTTGGTTGTATT+TGG | - | chr3_3:63411627-63411646 | Msa0463860:CDS | 35.0% |
| AAATGCTGCCTGATAATAAC+TGG | - | chr3_3:63411670-63411689 | Msa0463860:intron | 35.0% | |
| AATGCTGCCTGATAATAACT+GGG | - | chr3_3:63411671-63411690 | Msa0463860:intron | 35.0% | |
| CTCACTATTGTAAGTCCTTA+AGG | - | chr3_3:63411748-63411767 | Msa0463860:intron | 35.0% | |
| !! | ACTGAGCGTTGGAATTTATT+TGG | - | chr3_3:63411782-63411801 | Msa0463860:intron | 35.0% |
| GTACGATCACAAAGTGTATT+TGG | - | chr3_3:63411829-63411848 | Msa0463860:intron | 35.0% | |
| GAATTGGTTAATACCTGTGA+TGG | - | chr3_3:63412185-63412204 | Msa0463860:intron | 35.0% | |
| ATACATGTTTGGAAATCCGT+TGG | - | chr3_3:63412239-63412258 | Msa0463860:intron | 35.0% | |
| CATGTCTATCATACTGCAAT+TGG | + | chr3_3:63412268-63412287 | None:intergenic | 35.0% | |
| AATGCTACGCTACATACATT+AGG | - | chr3_3:63412296-63412315 | Msa0463860:intron | 35.0% | |
| GTTAACAGTTCTCTATGGTT+TGG | + | chr3_3:63412354-63412373 | None:intergenic | 35.0% | |
| GCATAGTTAACAGTTCTCTA+TGG | + | chr3_3:63412359-63412378 | None:intergenic | 35.0% | |
| TTGCTTGCTTCTATTAGACT+CGG | - | chr3_3:63412433-63412452 | Msa0463860:intron | 35.0% | |
| ATGGCGTATATAAATGTGGA+TGG | - | chr3_3:63412675-63412694 | Msa0463860:intron | 35.0% | |
| ! | TACTTTGAAGATTGGAGATC+TGG | - | chr3_3:63412803-63412822 | Msa0463860:intron | 35.0% |
| ! | ACTTTGAAGATTGGAGATCT+GGG | - | chr3_3:63412804-63412823 | Msa0463860:intron | 35.0% |
| CACTTTGTAAGCAAATCCTT+TGG | - | chr3_3:63412885-63412904 | Msa0463860:CDS | 35.0% | |
| CAACAACCATGTACTCTTTA+AGG | - | chr3_3:63412949-63412968 | Msa0463860:CDS | 35.0% | |
| GTATCCTTAACTCTCTTCAT+CGG | - | chr3_3:63413132-63413151 | Msa0463860:CDS | 35.0% | |
| TATCCTTAACTCTCTTCATC+GGG | - | chr3_3:63413133-63413152 | Msa0463860:CDS | 35.0% | |
| !!! | GTTGGGTTTGTTTTGGTCTA+TGG | + | chr3_3:63409325-63409344 | None:intergenic | 40.0% |
| ATTCCACCTTAACAACAGTG+CGG | + | chr3_3:63409400-63409419 | None:intergenic | 40.0% | |
| AAACTCGAATAGCTCTTTCC+AGG | - | chr3_3:63409447-63409466 | Msa0463860:intron | 40.0% | |
| AACTCGAATAGCTCTTTCCA+GGG | - | chr3_3:63409448-63409467 | Msa0463860:intron | 40.0% | |
| CTTTCCAGTCAAGTTCTTGT+TGG | - | chr3_3:63409533-63409552 | Msa0463860:intron | 40.0% | |
| TTGACCAACAAGAACTTGAC+TGG | + | chr3_3:63409540-63409559 | None:intergenic | 40.0% | |
| GTTGGTCAAATGTATTGCTC+TGG | - | chr3_3:63409551-63409570 | Msa0463860:intron | 40.0% | |
| AGGCTCACTAAGATAGCTAA+TGG | - | chr3_3:63409810-63409829 | Msa0463860:intron | 40.0% | |
| ! | CTTATCTCACTAAGTTGGGT+CGG | + | chr3_3:63409887-63409906 | None:intergenic | 40.0% |
| TTGTCCGATCTGCTTAAACA+AGG | - | chr3_3:63410415-63410434 | Msa0463860:intron | 40.0% | |
| TGTCCGATCTGCTTAAACAA+GGG | - | chr3_3:63410416-63410435 | Msa0463860:intron | 40.0% | |
| ! | GATCCCTTGTTTAAGCAGAT+CGG | + | chr3_3:63410422-63410441 | None:intergenic | 40.0% |
| TGTGTTTATAGGGACATGCA+TGG | - | chr3_3:63410778-63410797 | Msa0463860:intron | 40.0% | |
| TTCGGATTCAAGTGAAATGG+AGG | - | chr3_3:63410958-63410977 | Msa0463860:intron | 40.0% | |
| CCAGATACCAATCATACTAC+AGG | + | chr3_3:63411537-63411556 | None:intergenic | 40.0% | |
| CCTGTAGTATGATTGGTATC+TGG | - | chr3_3:63411534-63411553 | Msa0463860:intron | 40.0% | |
| TCGTACTCCCAGTTATTATC+AGG | + | chr3_3:63411681-63411700 | None:intergenic | 40.0% | |
| CTATTGTAAGTCCTTAAGGG+AGG | - | chr3_3:63411752-63411771 | Msa0463860:intron | 40.0% | |
| TTAGTAGCAAGCTGAAAGAG+AGG | - | chr3_3:63412059-63412078 | Msa0463860:intron | 40.0% | |
| TAGTAGCAAGCTGAAAGAGA+GGG | - | chr3_3:63412060-63412079 | Msa0463860:intron | 40.0% | |
| TTGGTTAATACCTGTGATGG+TGG | - | chr3_3:63412188-63412207 | Msa0463860:intron | 40.0% | |
| TGCTTGCTTCTATTAGACTC+GGG | - | chr3_3:63412434-63412453 | Msa0463860:intron | 40.0% | |
| !! | ATTACTTAGCTTTGGGCAAC+AGG | - | chr3_3:63412541-63412560 | Msa0463860:intron | 40.0% |
| !! | TTACTTAGCTTTGGGCAACA+GGG | - | chr3_3:63412542-63412561 | Msa0463860:intron | 40.0% |
| TTCTATAAGGAATTAGGCCC+TGG | - | chr3_3:63412623-63412642 | Msa0463860:intron | 40.0% | |
| TATAAATGTGGATGGTGCTC+AGG | - | chr3_3:63412683-63412702 | Msa0463860:intron | 40.0% | |
| ! | TGCGTGAGTGTTGTAAACTT+CGG | - | chr3_3:63412707-63412726 | Msa0463860:intron | 40.0% |
| AGAATCATACGTCAAGCCAA+AGG | + | chr3_3:63412904-63412923 | None:intergenic | 40.0% | |
| CATCACTGCCTTTAATGAAG+AGG | - | chr3_3:63413175-63413194 | Msa0463860:CDS | 40.0% | |
| CAATGCAGCAAACTCATAGA+AGG | + | chr3_3:63413214-63413233 | None:intergenic | 40.0% | |
| TGTAAGTAGCTGTGTTGCAA+TGG | - | chr3_3:63413326-63413345 | Msa0463860:five_prime_UTR | 40.0% | |
| TTCTTGTCGCACAGAGTCAA+AGG | + | chr3_3:63409270-63409289 | None:intergenic | 45.0% | |
| !!! | GATACGGGTTGGGTTTGTTT+TGG | + | chr3_3:63409332-63409351 | None:intergenic | 45.0% |
| CTGGTTCAATGATACGGGTT+GGG | + | chr3_3:63409342-63409361 | None:intergenic | 45.0% | |
| ! | ACTGGTTCAATGATACGGGT+TGG | + | chr3_3:63409343-63409362 | None:intergenic | 45.0% |
| !! | AGTGCGGTCTTGTTGTTTCT+TGG | + | chr3_3:63409384-63409403 | None:intergenic | 45.0% |
| ACAAGACCGCACTGTTGTTA+AGG | - | chr3_3:63409391-63409410 | Msa0463860:three_prime_UTR | 45.0% | |
| ! | AGAGCTATTCGAGTTTCCAC+AGG | + | chr3_3:63409443-63409462 | None:intergenic | 45.0% |
| AAACCACCGATGAGTGCAAT+CGG | + | chr3_3:63409480-63409499 | None:intergenic | 45.0% | |
| GTGGTTTCACGATACGCTTA+AGG | - | chr3_3:63409493-63409512 | Msa0463860:intron | 45.0% | |
| GTTTCACGATACGCTTAAGG+AGG | - | chr3_3:63409496-63409515 | Msa0463860:intron | 45.0% | |
| GGGATTGTTTGGGAGAACTT+AGG | - | chr3_3:63409737-63409756 | Msa0463860:intron | 45.0% | |
| !! | CTGCTTTGGAAATGAAGCTG+AGG | - | chr3_3:63410063-63410082 | Msa0463860:intron | 45.0% |
| ACAGACACAAAAGAAGGGCA+AGG | - | chr3_3:63410175-63410194 | Msa0463860:intron | 45.0% | |
| CAGACACAAAAGAAGGGCAA+GGG | - | chr3_3:63410176-63410195 | Msa0463860:intron | 45.0% | |
| AGACACAAAAGAAGGGCAAG+GGG | - | chr3_3:63410177-63410196 | Msa0463860:intron | 45.0% | |
| !! | TCAGGGGCATTGTTGTAATC+TGG | - | chr3_3:63410286-63410305 | Msa0463860:intron | 45.0% |
| !! | GGTTCTGAATCTCGTTCAGT+TGG | - | chr3_3:63410633-63410652 | Msa0463860:intron | 45.0% |
| CAACTAAGCGAAAAACCTCC+AGG | - | chr3_3:63410837-63410856 | Msa0463860:intron | 45.0% | |
| ATAAGACAGAGCAGCTTACC+TGG | + | chr3_3:63410858-63410877 | None:intergenic | 45.0% | |
| GTGCAGTTATTGAGCCAGTT+TGG | - | chr3_3:63410878-63410897 | Msa0463860:intron | 45.0% | |
| CAGGACAAGCAAAACCAAAC+TGG | + | chr3_3:63410895-63410914 | None:intergenic | 45.0% | |
| CGACAAGGCATATACCTTTG+TGG | + | chr3_3:63411220-63411239 | None:intergenic | 45.0% | |
| ACTATCAAGTGTCAGTCAGC+TGG | - | chr3_3:63411599-63411618 | Msa0463860:intron | 45.0% | |
| CTATCAAGTGTCAGTCAGCT+GGG | - | chr3_3:63411600-63411619 | Msa0463860:intron | 45.0% | |
| ATTTGCCTTATGGGACGTGA+AGG | - | chr3_3:63411934-63411953 | Msa0463860:intron | 45.0% | |
| AACATCCTTCACGTCCCATA+AGG | + | chr3_3:63411942-63411961 | None:intergenic | 45.0% | |
| !! | AAAGAGAGGGTGTCCAAACA+GGG | - | chr3_3:63412073-63412092 | Msa0463860:intron | 45.0% |
| TTTGCTGCTAACTCCCTGTT+TGG | + | chr3_3:63412089-63412108 | None:intergenic | 45.0% | |
| TTAGCAGCAAACTGGGATGA+AGG | - | chr3_3:63412098-63412117 | Msa0463860:intron | 45.0% | |
| ! | AAACTGGGATGAAGGTGCAT+GGG | - | chr3_3:63412106-63412125 | Msa0463860:intron | 45.0% |
| TGCATGGGTGAGAATGTAAC+AGG | - | chr3_3:63412121-63412140 | Msa0463860:intron | 45.0% | |
| GCATGGGTGAGAATGTAACA+GGG | - | chr3_3:63412122-63412141 | Msa0463860:intron | 45.0% | |
| GAGAATGTAACAGGGAATGC+TGG | - | chr3_3:63412130-63412149 | Msa0463860:intron | 45.0% | |
| TTCAACTTGTCCACCATCAC+AGG | + | chr3_3:63412201-63412220 | None:intergenic | 45.0% | |
| !! | ATGGTGGACAAGTTGAACAG+AGG | - | chr3_3:63412204-63412223 | Msa0463860:intron | 45.0% |
| ATACTGCAATTGGCAGCCAA+CGG | + | chr3_3:63412258-63412277 | None:intergenic | 45.0% | |
| ACGCTACATACATTAGGCAG+TGG | - | chr3_3:63412302-63412321 | Msa0463860:intron | 45.0% | |
| CTTCTATTAGACTCGGGATC+AGG | - | chr3_3:63412440-63412459 | Msa0463860:intron | 45.0% | |
| GATTCTAACCGCCTTATGCT+TGG | + | chr3_3:63412574-63412593 | None:intergenic | 45.0% | |
| CGGTTAGAATCATCGCTTTC+AGG | - | chr3_3:63412583-63412602 | Msa0463860:intron | 45.0% | |
| ! | GCGTGAGTGTTGTAAACTTC+GGG | - | chr3_3:63412708-63412727 | Msa0463860:intron | 45.0% |
| !! | GCGGTCTTGTTGTTTCTTGG+TGG | + | chr3_3:63409381-63409400 | None:intergenic | 50.0% |
| AGACCGCACTGTTGTTAAGG+TGG | - | chr3_3:63409394-63409413 | Msa0463860:three_prime_UTR | 50.0% | |
| TCGAATAGCTCTTTCCAGGG+TGG | - | chr3_3:63409451-63409470 | Msa0463860:intron | 50.0% | |
| ! | TGGTTGCCGATTGCACTCAT+CGG | - | chr3_3:63409471-63409490 | Msa0463860:intron | 50.0% |
| ACTGGAAAGATCCCCACGTT+TGG | + | chr3_3:63409522-63409541 | None:intergenic | 50.0% | |
| GCTGAGGTTAGATACAGTGC+CGG | - | chr3_3:63410079-63410098 | Msa0463860:intron | 50.0% | |
| CTGAGGTTAGATACAGTGCC+GGG | - | chr3_3:63410080-63410099 | Msa0463860:intron | 50.0% | |
| GTAAGTCCTTAAGGGAGGTC+AGG | - | chr3_3:63411757-63411776 | Msa0463860:intron | 50.0% | |
| GACGTGAAGGATGTTGATCG+AGG | - | chr3_3:63411947-63411966 | Msa0463860:intron | 50.0% | |
| !! | GAAAGAGAGGGTGTCCAAAC+AGG | - | chr3_3:63412072-63412091 | Msa0463860:intron | 50.0% |
| ACAGGGAGTTAGCAGCAAAC+TGG | - | chr3_3:63412090-63412109 | Msa0463860:intron | 50.0% | |
| CAGGGAGTTAGCAGCAAACT+GGG | - | chr3_3:63412091-63412110 | Msa0463860:intron | 50.0% | |
| ! | CAAACTGGGATGAAGGTGCA+TGG | - | chr3_3:63412105-63412124 | Msa0463860:intron | 50.0% |
| ! | GTAACAGGGAATGCTGGCTA+AGG | - | chr3_3:63412136-63412155 | Msa0463860:intron | 50.0% |
| TTGGCCATGCATGCATGTCA+TGG | + | chr3_3:63412335-63412354 | None:intergenic | 50.0% | |
| AACCGCCTTATGCTTGGATC+AGG | + | chr3_3:63412568-63412587 | None:intergenic | 50.0% | |
| CCTTAACTCTCTTCATCGGG+CGG | - | chr3_3:63413136-63413155 | Msa0463860:CDS | 50.0% | |
| TGGTTCGTGCAGCGATGAAC+TGG | + | chr3_3:63409361-63409380 | None:intergenic | 55.0% | |
| TCCACAGGCTCCACCTTCTT+CGG | + | chr3_3:63409428-63409447 | None:intergenic | 55.0% | |
| ! | TTGCCGATTGCACTCATCGG+TGG | - | chr3_3:63409474-63409493 | Msa0463860:intron | 55.0% |
| ACGCTTAAGGAGGCCAAACG+TGG | - | chr3_3:63409506-63409525 | Msa0463860:intron | 55.0% | |
| CGCTTAAGGAGGCCAAACGT+GGG | - | chr3_3:63409507-63409526 | Msa0463860:intron | 55.0% | |
| GCTTAAGGAGGCCAAACGTG+GGG | - | chr3_3:63409508-63409527 | Msa0463860:intron | 55.0% | |
| ! | AGGTTAGATACAGTGCCGGG+AGG | - | chr3_3:63410083-63410102 | Msa0463860:intron | 55.0% |
| ! | TAGATACAGTGCCGGGAGGT+TGG | - | chr3_3:63410087-63410106 | Msa0463860:intron | 55.0% |
| ACAAAAGAAGGGCAAGGGGC+AGG | - | chr3_3:63410181-63410200 | Msa0463860:intron | 55.0% | |
| CAAAAGAAGGGCAAGGGGCA+GGG | - | chr3_3:63410182-63410201 | Msa0463860:intron | 55.0% | |
| AAAAGAAGGGCAAGGGGCAG+GGG | - | chr3_3:63410183-63410202 | Msa0463860:intron | 55.0% | |
| AGACAGAGCAGCTTACCTGG+AGG | + | chr3_3:63410855-63410874 | None:intergenic | 55.0% | |
| CAGTTGCCTGACCTCCCTTA+AGG | + | chr3_3:63411766-63411785 | None:intergenic | 55.0% | |
| CCATGCATGCATGTCATGGC+AGG | + | chr3_3:63412331-63412350 | None:intergenic | 55.0% | |
| CCTGCCATGACATGCATGCA+TGG | - | chr3_3:63412328-63412347 | Msa0463860:intron | 55.0% | |
| CAGGGCCTGATCCAAGCATA+AGG | - | chr3_3:63412560-63412579 | Msa0463860:intron | 55.0% | |
| GGCCTGATCCAAGCATAAGG+CGG | - | chr3_3:63412563-63412582 | Msa0463860:intron | 55.0% | |
| CCGCCCGATGAAGAGAGTTA+AGG | + | chr3_3:63413139-63413158 | None:intergenic | 55.0% | |
| ACAGGCTCCACCTTCTTCGG+CGG | + | chr3_3:63409425-63409444 | None:intergenic | 60.0% | |
| AGTGCAATCGGCAACCACCC+TGG | + | chr3_3:63409468-63409487 | None:intergenic | 60.0% | |
| CTCCCTCCGCCCTTGCATTT+GGG | - | chr3_3:63410232-63410251 | Msa0463860:intron | 60.0% | |
| TCCCTCCGCCCTTGCATTTG+GGG | - | chr3_3:63410233-63410252 | Msa0463860:intron | 60.0% | |
| AGACCCACAGCTGCACTTGC+AGG | - | chr3_3:63410662-63410681 | Msa0463860:intron | 60.0% | |
| CAGCCTGCAAGTGCAGCTGT+GGG | + | chr3_3:63410668-63410687 | None:intergenic | 60.0% | |
| !! | GCTGGGCGCTGCACCTATTT+TGG | - | chr3_3:63411617-63411636 | Msa0463860:CDS | 60.0% |
| GAGGTCAGGCAACTGAGCGT+TGG | - | chr3_3:63411771-63411790 | Msa0463860:intron | 60.0% | |
| GGTGGAATCGCCGCCGAAGA+AGG | - | chr3_3:63409412-63409431 | Msa0463860:three_prime_UTR | 65.0% | |
| GGAATCGCCGCCGAAGAAGG+TGG | - | chr3_3:63409415-63409434 | Msa0463860:three_prime_UTR | 65.0% | |
| GCCGAAGAAGGTGGAGCCTG+TGG | - | chr3_3:63409424-63409443 | Msa0463860:three_prime_UTR | 65.0% | |
| GCTCCCTCCGCCCTTGCATT+TGG | - | chr3_3:63410231-63410250 | Msa0463860:intron | 65.0% | |
| CCCCCAAATGCAAGGGCGGA+GGG | + | chr3_3:63410237-63410256 | None:intergenic | 65.0% | |
| CCCTCCGCCCTTGCATTTGG+GGG | - | chr3_3:63410234-63410253 | Msa0463860:intron | 65.0% | |
| ACCCCCAAATGCAAGGGCGG+AGG | + | chr3_3:63410238-63410257 | None:intergenic | 65.0% | |
| CGCACCCCCAAATGCAAGGG+CGG | + | chr3_3:63410241-63410260 | None:intergenic | 65.0% | |
| CGCCCTTGCATTTGGGGGTG+CGG | - | chr3_3:63410239-63410258 | Msa0463860:intron | 65.0% | |
| ! | GCCCTTGCATTTGGGGGTGC+GGG | - | chr3_3:63410240-63410259 | Msa0463860:intron | 65.0% |
| CCCCGCACCCCCAAATGCAA+GGG | + | chr3_3:63410244-63410263 | None:intergenic | 65.0% | |
| ! | CCCTTGCATTTGGGGGTGCG+GGG | - | chr3_3:63410241-63410260 | Msa0463860:intron | 65.0% |
| ! | CCTTGCATTTGGGGGTGCGG+GGG | - | chr3_3:63410242-63410261 | Msa0463860:intron | 65.0% |
| ATGCCCCTGACCCGTACCGT+GGG | + | chr3_3:63410276-63410295 | None:intergenic | 65.0% | |
| AATGCCCCTGACCCGTACCG+TGG | + | chr3_3:63410277-63410296 | None:intergenic | 65.0% | |
| GCAGCCTGCAAGTGCAGCTG+TGG | + | chr3_3:63410669-63410688 | None:intergenic | 65.0% | |
| CCCCCGCACCCCCAAATGCA+AGG | + | chr3_3:63410245-63410264 | None:intergenic | 70.0% | |
| GGGCGATAGCCCCCACGGTA+CGG | - | chr3_3:63410262-63410281 | Msa0463860:intron | 70.0% | |
| GGCGATAGCCCCCACGGTAC+GGG | - | chr3_3:63410263-63410282 | Msa0463860:intron | 70.0% | |
| TAGCCCCCACGGTACGGGTC+AGG | - | chr3_3:63410268-63410287 | Msa0463860:intron | 70.0% | |
| AGCCCCCACGGTACGGGTCA+GGG | - | chr3_3:63410269-63410288 | Msa0463860:intron | 70.0% | |
| TGCCCCTGACCCGTACCGTG+GGG | + | chr3_3:63410275-63410294 | None:intergenic | 70.0% | |
| TGCGGGGGCGATAGCCCCCA+CGG | - | chr3_3:63410257-63410276 | Msa0463860:intron | 75.0% | |
| GCCCCCACGGTACGGGTCAG+GGG | - | chr3_3:63410270-63410289 | Msa0463860:intron | 75.0% | |
| GCCCCTGACCCGTACCGTGG+GGG | + | chr3_3:63410274-63410293 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 63409054 | 63413405 | 63409054 | ID=Msa0463860;Name=Msa0463860 |
| chr3_3 | mRNA | 63409054 | 63413405 | 63409054 | ID=Msa0463860-mRNA-1;Parent=Msa0463860;Name=Msa0463860-mRNA-1;_AED=0.03;_eAED=0.03;_QI=203|1|1|1|0.66|0.5|4|409|156 |
| chr3_3 | exon | 63409054 | 63409447 | 63409054 | ID=Msa0463860-mRNA-1:exon:13808;Parent=Msa0463860-mRNA-1 |
| chr3_3 | exon | 63411447 | 63411517 | 63411447 | ID=Msa0463860-mRNA-1:exon:13807;Parent=Msa0463860-mRNA-1 |
| chr3_3 | exon | 63411601 | 63411670 | 63411601 | ID=Msa0463860-mRNA-1:exon:13806;Parent=Msa0463860-mRNA-1 |
| chr3_3 | exon | 63412858 | 63413405 | 63412858 | ID=Msa0463860-mRNA-1:exon:13805;Parent=Msa0463860-mRNA-1 |
| chr3_3 | five_prime_UTR | 63413203 | 63413405 | 63413203 | ID=Msa0463860-mRNA-1:five_prime_utr;Parent=Msa0463860-mRNA-1 |
| chr3_3 | CDS | 63412858 | 63413202 | 63412858 | ID=Msa0463860-mRNA-1:cds;Parent=Msa0463860-mRNA-1 |
| chr3_3 | CDS | 63411601 | 63411670 | 63411601 | ID=Msa0463860-mRNA-1:cds;Parent=Msa0463860-mRNA-1 |
| chr3_3 | CDS | 63411462 | 63411517 | 63411462 | ID=Msa0463860-mRNA-1:cds;Parent=Msa0463860-mRNA-1 |
| chr3_3 | three_prime_UTR | 63411447 | 63411461 | 63411447 | ID=Msa0463860-mRNA-1:three_prime_utr;Parent=Msa0463860-mRNA-1 |
| chr3_3 | three_prime_UTR | 63409054 | 63409447 | 63409054 | ID=Msa0463860-mRNA-1:three_prime_utr;Parent=Msa0463860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
