Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0479700 | XP_003603840.3 | 94.695 | 377 | 2 | 1 | 1 | 359 | 74 | 450 | 0.0 | 713 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0479700 | sp|Q8CIA9|MF14B_MOUSE | 25.281 | 356 | 202 | 12 | 3 | 326 | 92 | 415 | 2.37e-12 | 71.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0479700 | G7J5X3 | 94.695 | 377 | 2 | 1 | 1 | 359 | 58 | 434 | 0.0 | 712 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0044100 | Msa0479700 | 0.800097 | 1.691003e-48 | -8.615850e-47 |
Msa0183750 | Msa0479700 | 0.808283 | 3.342666e-50 | -8.615850e-47 |
Msa0385670 | Msa0479700 | 0.963090 | 1.163110e-121 | -8.615850e-47 |
Msa0435670 | Msa0479700 | 0.923122 | 4.026035e-89 | -8.615850e-47 |
Msa0470860 | Msa0479700 | 0.856313 | 3.500433e-62 | -8.615850e-47 |
Msa0479680 | Msa0479700 | 0.989538 | 1.490661e-178 | -8.615850e-47 |
Msa0479700 | Msa0480950 | 0.810240 | 1.271746e-50 | -8.615850e-47 |
Msa0479700 | Msa0531430 | 0.804661 | 1.940654e-49 | -8.615850e-47 |
Msa0479700 | Msa0565600 | 0.850189 | 1.993818e-60 | -8.615850e-47 |
Msa0479700 | Msa0618180 | 0.823727 | 1.185479e-53 | -8.615850e-47 |
Msa0479700 | Msa0618220 | 0.829689 | 4.473145e-55 | -8.615850e-47 |
Msa0479700 | Msa0701970 | 0.827420 | 1.579916e-54 | -8.615850e-47 |
Msa0479700 | Msa0716450 | 0.804210 | 2.409829e-49 | -8.615850e-47 |
Msa0479700 | Msa0717260 | 0.830607 | 2.670164e-55 | -8.615850e-47 |
Msa0479700 | Msa0758320 | 0.816643 | 4.974581e-52 | -8.615850e-47 |
Msa0479700 | Msa0775440 | 0.800773 | 1.231620e-48 | -8.615850e-47 |
Msa0479700 | Msa0837980 | 0.827983 | 1.157427e-54 | -8.615850e-47 |
Msa0479700 | Msa0853320 | 0.800203 | 1.608917e-48 | -8.615850e-47 |
Msa0479700 | Msa1190120 | 0.847593 | 1.048351e-59 | -8.615850e-47 |
Msa0479700 | Msa1203000 | 0.817106 | 3.916275e-52 | -8.615850e-47 |
Msa0479700 | Msa1211550 | 0.837832 | 4.117928e-57 | -8.615850e-47 |
Msa0479700 | Msa1219260 | 0.827873 | 1.230074e-54 | -8.615850e-47 |
Msa0479700 | Msa1227950 | 0.841923 | 3.540135e-58 | -8.615850e-47 |
Msa0479700 | Msa1227970 | 0.827268 | 1.718631e-54 | -8.615850e-47 |
Msa0479700 | Msa1255280 | 0.810903 | 9.143801e-51 | -8.615850e-47 |
Msa0479700 | Msa1266960 | 0.833276 | 5.851136e-56 | -8.615850e-47 |
Msa0479700 | Msa1271030 | 0.806512 | 7.936354e-50 | -8.615850e-47 |
Msa0479700 | Msa1308130 | 0.869308 | 3.413459e-66 | -8.615850e-47 |
Msa0479700 | Msa1339940 | 0.844032 | 9.718418e-59 | -8.615850e-47 |
Msa0479700 | Msa1369700 | 0.800313 | 1.528194e-48 | -8.615850e-47 |
Msa0479700 | Msa1399560 | 0.827127 | 1.857637e-54 | -8.615850e-47 |
Msa0479700 | Msa1437190 | 0.815010 | 1.150917e-51 | -8.615850e-47 |
Msa0479700 | Msa1443840 | 0.811238 | 7.734989e-51 | -8.615850e-47 |
Msa0479700 | Msa1452060 | 0.840857 | 6.753088e-58 | -8.615850e-47 |
Msa0479700 | Msa1460380 | 0.805488 | 1.303168e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0479700 | MtrunA17_Chr3g0143461 | 94.695 | 377 | 2 | 1 | 1 | 359 | 1 | 377 | 0.0 | 712 |
Msa0479700 | MtrunA17_Chr1g0211401 | 50.265 | 378 | 161 | 4 | 1 | 358 | 56 | 426 | 6.76e-130 | 379 |
Msa0479700 | MtrunA17_Chr1g0198451 | 33.423 | 371 | 212 | 3 | 3 | 352 | 64 | 420 | 3.55e-65 | 213 |
Msa0479700 | MtrunA17_Chr1g0198441 | 33.152 | 368 | 217 | 3 | 3 | 352 | 64 | 420 | 2.30e-64 | 211 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0479700 | AT5G42210.1 | 54.155 | 373 | 152 | 2 | 3 | 357 | 61 | 432 | 5.58e-141 | 407 |
Msa0479700 | AT5G42210.2 | 53.453 | 333 | 136 | 2 | 3 | 317 | 61 | 392 | 9.44e-122 | 357 |
Msa0479700 | AT2G16980.2 | 41.814 | 397 | 180 | 3 | 2 | 357 | 60 | 446 | 1.31e-106 | 320 |
Msa0479700 | AT2G16980.3 | 41.814 | 397 | 180 | 3 | 2 | 357 | 75 | 461 | 1.99e-106 | 320 |
Msa0479700 | AT2G16990.7 | 45.553 | 371 | 170 | 4 | 2 | 342 | 59 | 427 | 2.03e-106 | 319 |
Msa0479700 | AT2G16990.1 | 45.195 | 385 | 179 | 4 | 2 | 356 | 59 | 441 | 1.32e-105 | 318 |
Msa0479700 | AT2G16990.2 | 45.195 | 385 | 179 | 4 | 2 | 356 | 59 | 441 | 1.32e-105 | 318 |
Msa0479700 | AT2G16970.2 | 42.377 | 387 | 190 | 3 | 2 | 356 | 60 | 445 | 1.65e-104 | 315 |
Msa0479700 | AT2G16980.4 | 41.562 | 397 | 180 | 4 | 2 | 357 | 75 | 460 | 1.84e-101 | 308 |
Msa0479700 | AT2G16990.4 | 44.253 | 348 | 162 | 4 | 2 | 319 | 59 | 404 | 5.76e-94 | 286 |
Msa0479700 | AT2G16990.6 | 44.253 | 348 | 162 | 4 | 2 | 319 | 59 | 404 | 5.76e-94 | 286 |
Msa0479700 | AT2G16990.8 | 41.818 | 385 | 165 | 5 | 2 | 356 | 59 | 414 | 4.42e-89 | 275 |
Msa0479700 | AT2G16980.1 | 39.665 | 358 | 165 | 3 | 2 | 318 | 75 | 422 | 1.35e-87 | 270 |
Msa0479700 | AT2G16970.4 | 40.401 | 349 | 175 | 3 | 2 | 318 | 60 | 407 | 1.49e-86 | 267 |
Msa0479700 | AT2G16970.7 | 40.401 | 349 | 175 | 3 | 2 | 318 | 60 | 407 | 1.49e-86 | 267 |
Msa0479700 | AT2G16970.3 | 39.178 | 365 | 189 | 3 | 2 | 334 | 60 | 423 | 4.59e-86 | 267 |
Msa0479700 | AT2G16980.5 | 37.565 | 386 | 162 | 5 | 2 | 318 | 75 | 450 | 1.83e-83 | 261 |
Msa0479700 | AT2G16990.3 | 45.329 | 289 | 144 | 3 | 2 | 278 | 59 | 345 | 9.80e-80 | 249 |
Msa0479700 | AT2G16990.5 | 45.329 | 289 | 144 | 3 | 2 | 278 | 59 | 345 | 9.80e-80 | 249 |
Msa0479700 | AT2G16970.1 | 38.344 | 326 | 173 | 3 | 2 | 300 | 60 | 384 | 4.96e-75 | 237 |
Msa0479700 | AT2G16970.6 | 39.506 | 324 | 163 | 3 | 2 | 293 | 60 | 382 | 5.85e-75 | 237 |
Msa0479700 | AT2G16980.6 | 39.053 | 338 | 154 | 4 | 61 | 357 | 1 | 327 | 1.60e-74 | 234 |
Msa0479700 | AT2G16970.8 | 41.237 | 291 | 156 | 2 | 2 | 278 | 60 | 349 | 3.76e-74 | 234 |
Msa0479700 | AT2G16970.5 | 45.732 | 164 | 71 | 1 | 211 | 356 | 175 | 338 | 9.97e-44 | 154 |
Msa0479700 | AT2G16970.5 | 55.652 | 115 | 51 | 0 | 2 | 116 | 60 | 174 | 2.22e-35 | 132 |
Find 84 sgRNAs with CRISPR-Local
Find 527 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCGACTTAATGATCATTTC+TGG | 0.173185 | 3_3:+84796371 | Msa0479700:CDS |
TTGTGTGCAGTATTACTTAA+AGG | 0.198024 | 3_3:+84796319 | Msa0479700:intron |
CTTGCAGATGTTGGCCTTCA+TGG | 0.200217 | 3_3:+84795967 | Msa0479700:CDS |
ACTTTCCACTCACCCGTTAA+TGG | 0.208512 | 3_3:-84797457 | None:intergenic |
GCTTGTGATGATGCCCATTT+TGG | 0.228414 | 3_3:+84790577 | Msa0479700:CDS |
ATCAGAGAGATCACCCAAAA+TGG | 0.242550 | 3_3:-84790591 | None:intergenic |
GCACTGCTTCTTCGACCTTC+TGG | 0.250970 | 3_3:-84795026 | None:intergenic |
GGTGATCTCTCTGATAAGTA+TGG | 0.311306 | 3_3:+84790599 | Msa0479700:CDS |
GGCTTTCCTTGTGAAATGAT+TGG | 0.315353 | 3_3:-84795313 | None:intergenic |
CTGAAGCCAGGAAAATTAAA+AGG | 0.317779 | 3_3:-84797574 | None:intergenic |
ATGATCATTTCTGGTATTGC+AGG | 0.320953 | 3_3:+84796380 | Msa0479700:CDS |
GCTTTCCTTGTGAAATGATT+GGG | 0.321252 | 3_3:-84795312 | None:intergenic |
GGGATAATCATGAGGGTCAT+AGG | 0.323838 | 3_3:-84790644 | None:intergenic |
CTTGGCTTTCTCTCCATTAA+CGG | 0.331892 | 3_3:+84797444 | Msa0479700:CDS |
AGTGCATTTGGAGTTCTTTC+AGG | 0.349547 | 3_3:+84795044 | Msa0479700:CDS |
GGTCGAAGAAGCAGTGCATT+TGG | 0.349597 | 3_3:+84795032 | Msa0479700:CDS |
TATGTCCATCTAACTCAAAA+TGG | 0.361400 | 3_3:-84797752 | None:intergenic |
AGGGCTCAAGGTTGCATCTC+AGG | 0.406266 | 3_3:+84797391 | Msa0479700:CDS |
TTGGCTTTCTCTCCATTAAC+GGG | 0.411542 | 3_3:+84797445 | Msa0479700:CDS |
ACAGCATAGCATGGTCCTCT+TGG | 0.414980 | 3_3:+84796731 | Msa0479700:CDS |
AAAGGAGGTTATATCTCTTA+AGG | 0.419562 | 3_3:-84795398 | None:intergenic |
TTCAGCAACCTTGCAGATGT+TGG | 0.424383 | 3_3:+84795958 | Msa0479700:CDS |
GACCCTCATGATTATCCCCT+TGG | 0.424391 | 3_3:+84790649 | Msa0479700:CDS |
GGCTTCAGTATAATGTGTAT+TGG | 0.431166 | 3_3:+84797589 | Msa0479700:CDS |
TGCACATATTGTATCTCCCT+TGG | 0.435532 | 3_3:+84797426 | Msa0479700:CDS |
AGCTCTATTTCTATCTGAAA+AGG | 0.445760 | 3_3:+84797549 | Msa0479700:intron |
CAGCATAGCATGGTCCTCTT+GGG | 0.448466 | 3_3:+84796732 | Msa0479700:CDS |
TGGATGATTCGCAGGCATAT+TGG | 0.454868 | 3_3:+84794740 | Msa0479700:intron |
TTTGGAGTTCTTTCAGGGAT+AGG | 0.457164 | 3_3:+84795050 | Msa0479700:CDS |
AAATGATTGGGGTATAAAGT+TGG | 0.469648 | 3_3:-84795300 | None:intergenic |
CTCCTACTTTGGGCGAGGCA+AGG | 0.477680 | 3_3:+84796573 | Msa0479700:CDS |
TTCTTTCAGGGAAGGGCTCA+AGG | 0.479698 | 3_3:+84797379 | Msa0479700:intron |
TGCAGTATTACTTAAAGGCT+CGG | 0.491711 | 3_3:+84796324 | Msa0479700:intron |
GTGCATTTGGAGTTCTTTCA+GGG | 0.492657 | 3_3:+84795045 | Msa0479700:CDS |
TCGTCAATATTTACTCATAG+TGG | 0.496771 | 3_3:+84797801 | Msa0479700:three_prime_UTR |
ACAGTTTCTATAGATAAAGA+AGG | 0.497344 | 3_3:-84797827 | None:intergenic |
ATCATTAACATGATTTGCGA+TGG | 0.498843 | 3_3:+84794813 | Msa0479700:CDS |
GAGGCAAGGCTTCTTTCGAT+TGG | 0.501981 | 3_3:+84796587 | Msa0479700:CDS |
TATTGCAGGGACTGTGTCAC+AGG | 0.508069 | 3_3:+84796394 | Msa0479700:CDS |
ACTAAAATTAAGACAAAGAC+GGG | 0.508180 | 3_3:-84797979 | None:intergenic |
TAACCTCCTTTCTCAATAGT+AGG | 0.508494 | 3_3:+84795410 | Msa0479700:CDS |
AATGTGTATTGGAATTGCTT+CGG | 0.510199 | 3_3:+84797600 | Msa0479700:CDS |
GAGCTCAATGCTTTCAAAAG+TGG | 0.510207 | 3_3:-84795376 | None:intergenic |
CCTGCTCACGGGGATCAACT+TGG | 0.511306 | 3_3:-84797104 | None:intergenic |
ACCCTCATGATTATCCCCTT+GGG | 0.512456 | 3_3:+84790650 | Msa0479700:CDS |
GGATAATCATGAGGGTCATA+GGG | 0.513412 | 3_3:-84790643 | None:intergenic |
TCAGAGAGATCACCCAAAAT+GGG | 0.513615 | 3_3:-84790590 | None:intergenic |
GGTCATAGGGAGCGTAAGAA+TGG | 0.513622 | 3_3:-84790630 | None:intergenic |
CTTTCCTTGTGAAATGATTG+GGG | 0.515488 | 3_3:-84795311 | None:intergenic |
TAAACAAACAAAATGTCTAC+TGG | 0.523583 | 3_3:-84797946 | None:intergenic |
CCAAGTTGATCCCCGTGAGC+AGG | 0.523904 | 3_3:+84797104 | Msa0479700:CDS |
CTCTGATAAGTATGGGAGGA+AGG | 0.534368 | 3_3:+84790607 | Msa0479700:CDS |
TTAACATGATACCTGCTCAC+GGG | 0.541820 | 3_3:-84797115 | None:intergenic |
GTCACACCTACTATTGAGAA+AGG | 0.547596 | 3_3:-84795416 | None:intergenic |
TGATCATTTCTGGTATTGCA+GGG | 0.548846 | 3_3:+84796381 | Msa0479700:CDS |
ACCAGAAATGATCATTAAGT+CGG | 0.565383 | 3_3:-84796372 | None:intergenic |
AACTAAAATTAAGACAAAGA+CGG | 0.573749 | 3_3:-84797980 | None:intergenic |
TCCATCTAACTCAAAATGGA+AGG | 0.576928 | 3_3:-84797748 | None:intergenic |
TGGCCTTCATGGTTCAATGA+TGG | 0.579807 | 3_3:+84795978 | Msa0479700:CDS |
GTGATCTCTCTGATAAGTAT+GGG | 0.589147 | 3_3:+84790600 | Msa0479700:CDS |
ATACCATCATTGAACCATGA+AGG | 0.590082 | 3_3:-84795981 | None:intergenic |
AGCCTTGCCTCGCCCAAAGT+AGG | 0.594097 | 3_3:-84796575 | None:intergenic |
TCAGAGTATGATGCTTAGAG+TGG | 0.595054 | 3_3:+84797723 | Msa0479700:CDS |
ATACACATTATACTGAAGCC+AGG | 0.605025 | 3_3:-84797586 | None:intergenic |
ATCTCTCTGATAAGTATGGG+AGG | 0.608663 | 3_3:+84790603 | Msa0479700:CDS |
ATTAACATGATACCTGCTCA+CGG | 0.609111 | 3_3:-84797116 | None:intergenic |
TGTTCATTTACAGCATAGCA+TGG | 0.610699 | 3_3:+84796722 | Msa0479700:CDS |
TACCCAAGGGGATAATCATG+AGG | 0.613909 | 3_3:-84790652 | None:intergenic |
TATACCCCAATCATTTCACA+AGG | 0.622314 | 3_3:+84795307 | Msa0479700:CDS |
CATCGGCGACTGAATCCCGA+AGG | 0.645898 | 3_3:-84795273 | None:intergenic |
TAACATGATACCTGCTCACG+GGG | 0.648157 | 3_3:-84797114 | None:intergenic |
CGTTAATGGAGAGAAAGCCA+AGG | 0.651353 | 3_3:-84797443 | None:intergenic |
ACCCAAGGGGATAATCATGA+GGG | 0.653332 | 3_3:-84790651 | None:intergenic |
TAGGCAGATAACGTTCCAGA+AGG | 0.656602 | 3_3:+84795011 | Msa0479700:intron |
CATGAAGGCCAACATCTGCA+AGG | 0.659193 | 3_3:-84795966 | None:intergenic |
ACGTAAGCTAGAGCGAGGCA+AGG | 0.659385 | 3_3:-84794843 | None:intergenic |
AGATGTGTAGTACATGTATG+TGG | 0.668672 | 3_3:+84798120 | Msa0479700:three_prime_UTR |
CACCTGAAAAGTTTGAGCAG+CGG | 0.670212 | 3_3:-84795117 | None:intergenic |
GTTAATGGAGAGAAAGCCAA+GGG | 0.684337 | 3_3:-84797442 | None:intergenic |
ACACCTACTATTGAGAAAGG+AGG | 0.685291 | 3_3:-84795413 | None:intergenic |
CAGCAAAAGACATACCCAAG+AGG | 0.697205 | 3_3:-84796746 | None:intergenic |
TAACAACGTAAGCTAGAGCG+AGG | 0.704711 | 3_3:-84794848 | None:intergenic |
TGTTGCACACACAAACGCTG+AGG | 0.726307 | 3_3:-84795075 | None:intergenic |
AGTAGAAAGAAGTACCCAAG+GGG | 0.729323 | 3_3:-84790664 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATTAAATATATTAAAA+TGG | + | chr3_3:84791431-84791450 | Msa0479700:intron | 0.0% |
!!! | TATTTTTTTTTTTTTTTTTA+GGG | - | chr3_3:84798026-84798045 | None:intergenic | 0.0% |
!!! | TCTTTTATAATTTTTTTTGT+AGG | - | chr3_3:84790744-84790763 | None:intergenic | 10.0% |
!!! | TAAAAGAAAAAGTATTATTT+TGG | + | chr3_3:84790757-84790776 | Msa0479700:intron | 10.0% |
!! | TTCAAAAAAAAAAAAAACTA+TGG | + | chr3_3:84790875-84790894 | Msa0479700:intron | 10.0% |
!! | ATATTTGATATATTGTTTAT+TGG | - | chr3_3:84791210-84791229 | None:intergenic | 10.0% |
!!! | TCTTTTTAAAAATTTTTTGT+GGG | - | chr3_3:84793190-84793209 | None:intergenic | 10.0% |
!! | AAGAAAAATGTATAAATAAA+GGG | - | chr3_3:84796208-84796227 | None:intergenic | 10.0% |
!! | TAAGAAAAATGTATAAATAA+AGG | - | chr3_3:84796209-84796228 | None:intergenic | 10.0% |
!! | TTATGTTGTATTAATTATTA+AGG | + | chr3_3:84796883-84796902 | Msa0479700:intron | 10.0% |
!!! | ATTATATTTTGAATAACAAA+GGG | - | chr3_3:84797033-84797052 | None:intergenic | 10.0% |
!!! | AATTATATTTTGAATAACAA+AGG | - | chr3_3:84797034-84797053 | None:intergenic | 10.0% |
!!! | AATATTTTTGTTAGAAAAAT+AGG | + | chr3_3:84797155-84797174 | Msa0479700:intron | 10.0% |
!!! | ATACATAAAATATATTGATT+AGG | + | chr3_3:84797186-84797205 | Msa0479700:intron | 10.0% |
!!! | AATGCTATTTATTTTATTTT+TGG | + | chr3_3:84797309-84797328 | Msa0479700:intron | 10.0% |
!!! | ATAACTGTTTTTAAATTATT+AGG | - | chr3_3:84798099-84798118 | None:intergenic | 10.0% |
!! | TAATATAAAACACAAATCTA+TGG | + | chr3_3:84790842-84790861 | Msa0479700:intron | 15.0% |
!!! | AATTATCTAAAATTGATTGT+AGG | - | chr3_3:84791331-84791350 | None:intergenic | 15.0% |
!!! | CAATAGATTTTTTTTTTGAA+AGG | + | chr3_3:84791401-84791420 | Msa0479700:intron | 15.0% |
!!! | CTTTTTAAAAATTTTTTGTG+GGG | - | chr3_3:84793189-84793208 | None:intergenic | 15.0% |
!!! | CTCTTTTTAAAAATTTTTTG+TGG | - | chr3_3:84793191-84793210 | None:intergenic | 15.0% |
!!! | AAATGACAAAATAAAAGTTT+TGG | - | chr3_3:84794556-84794575 | None:intergenic | 15.0% |
!! | TTGCTTTATAAATATAATGT+AGG | + | chr3_3:84794992-84795011 | Msa0479700:intron | 15.0% |
!! | CACTATTAAATTTATTATCT+AGG | + | chr3_3:84795453-84795472 | Msa0479700:intron | 15.0% |
!!! | TTTTAAAAATGTGGAATTTA+AGG | + | chr3_3:84795566-84795585 | Msa0479700:intron | 15.0% |
!! | AATTAGAGTTATATTGTATT+GGG | - | chr3_3:84796143-84796162 | None:intergenic | 15.0% |
!! | TAATTAGAGTTATATTGTAT+TGG | - | chr3_3:84796144-84796163 | None:intergenic | 15.0% |
!! | AGAAAAATGTATAAATAAAG+GGG | - | chr3_3:84796207-84796226 | None:intergenic | 15.0% |
!!! | GTAGTAAATTATTTTATAAG+TGG | + | chr3_3:84796809-84796828 | Msa0479700:intron | 15.0% |
!!! | TTATATTTTGAATAACAAAG+GGG | - | chr3_3:84797032-84797051 | None:intergenic | 15.0% |
!! | ATGCTTATAATATATTAAGT+TGG | + | chr3_3:84797336-84797355 | Msa0479700:intron | 15.0% |
!!! | TTGAATTTGACATTGTTTTA+TGG | + | chr3_3:84790710-84790729 | Msa0479700:intron | 20.0% |
!! | TTCACTCAATAATAAAAAGT+TGG | - | chr3_3:84790940-84790959 | None:intergenic | 20.0% |
!! | TCAAATATAATTATCTCTAG+TGG | + | chr3_3:84791222-84791241 | Msa0479700:intron | 20.0% |
!! | CATTATGTATATGTATTTCT+GGG | - | chr3_3:84791570-84791589 | None:intergenic | 20.0% |
!! | TCATTATGTATATGTATTTC+TGG | - | chr3_3:84791571-84791590 | None:intergenic | 20.0% |
!! | GAAATACATATACATAATGA+AGG | + | chr3_3:84791571-84791590 | Msa0479700:intron | 20.0% |
!! | TTAAATACAACTTTAATCAC+TGG | - | chr3_3:84792055-84792074 | None:intergenic | 20.0% |
!! | AAAATCTTCAAAGACAAAAA+TGG | - | chr3_3:84792149-84792168 | None:intergenic | 20.0% |
!! | TATTAAATCATTCCAAACAT+CGG | + | chr3_3:84792511-84792530 | Msa0479700:intron | 20.0% |
!! | AAATAATAGAAAAGGTTCAA+GGG | - | chr3_3:84792655-84792674 | None:intergenic | 20.0% |
!! | AGATATTCAAAATATTGAGA+GGG | - | chr3_3:84792926-84792945 | None:intergenic | 20.0% |
!! | AACAAATGGAAGAATAAATA+GGG | - | chr3_3:84792977-84792996 | None:intergenic | 20.0% |
!! | AAACAAATGGAAGAATAAAT+AGG | - | chr3_3:84792978-84792997 | None:intergenic | 20.0% |
!!! | CATTTGTTTGAATTAGTTTA+TGG | - | chr3_3:84793537-84793556 | None:intergenic | 20.0% |
!! | AGTGGTTCAAAAATTAATAT+CGG | - | chr3_3:84794057-84794076 | None:intergenic | 20.0% |
!!! | CAAATTTCTGAAATGTTATT+TGG | - | chr3_3:84794911-84794930 | None:intergenic | 20.0% |
!!! | CATATTGTTCATTTTGAATT+TGG | - | chr3_3:84794937-84794956 | None:intergenic | 20.0% |
!! | GAGAAAACATAATTGATATA+GGG | - | chr3_3:84795193-84795212 | None:intergenic | 20.0% |
!! | AAATTTATTTCATAGCAACA+AGG | - | chr3_3:84795680-84795699 | None:intergenic | 20.0% |
!! | ATATTTGTGTGATTAATAAC+TGG | + | chr3_3:84795721-84795740 | Msa0479700:intron | 20.0% |
!! | AGAAACACATATTTATGAAT+AGG | + | chr3_3:84795849-84795868 | Msa0479700:intron | 20.0% |
!!! | GACACTTTTTTTTAGTAAAT+GGG | - | chr3_3:84796074-84796093 | None:intergenic | 20.0% |
!! | GTTGTATTGAAAATTGAAAT+GGG | - | chr3_3:84796110-84796129 | None:intergenic | 20.0% |
!! | AGTTGTATTGAAAATTGAAA+TGG | - | chr3_3:84796111-84796130 | None:intergenic | 20.0% |
!! | AAAGTGGAATATATTGTATT+GGG | - | chr3_3:84796184-84796203 | None:intergenic | 20.0% |
!!! | CATAGTTGATAATTGATATT+TGG | - | chr3_3:84796448-84796467 | None:intergenic | 20.0% |
!! | TAATACAACATAAAATGAGA+AGG | - | chr3_3:84796876-84796895 | None:intergenic | 20.0% |
!! | TGATTAGGAAAAAAATTGAA+TGG | + | chr3_3:84797201-84797220 | Msa0479700:intron | 20.0% |
!! | TTCTTTCTTGTCTAATTATA+TGG | + | chr3_3:84797657-84797676 | Msa0479700:intron | 20.0% |
!! | AACTAAAATTAAGACAAAGA+CGG | - | chr3_3:84797983-84798002 | None:intergenic | 20.0% |
! | AGTACATAATTCAAGTGTTT+AGG | + | chr3_3:84790904-84790923 | Msa0479700:intron | 25.0% |
! | AATTCTTAGATCATACTAGT+AGG | + | chr3_3:84790960-84790979 | Msa0479700:intron | 25.0% |
! | GAAAAACTTATTACTAGTCA+AGG | + | chr3_3:84791084-84791103 | Msa0479700:intron | 25.0% |
! | GTGAGAAATGTCTATATAAT+TGG | + | chr3_3:84791181-84791200 | Msa0479700:intron | 25.0% |
! | AATATAATTATCTCTAGTGG+AGG | + | chr3_3:84791225-84791244 | Msa0479700:intron | 25.0% |
!! | TTTTCACAACTACTTTCAAA+TGG | + | chr3_3:84791349-84791368 | Msa0479700:intron | 25.0% |
! | GTTAATGTAGCTAAAATGTA+TGG | + | chr3_3:84791371-84791390 | Msa0479700:intron | 25.0% |
! | ATATATTAAAATGGTACCAG+TGG | + | chr3_3:84791440-84791459 | Msa0479700:intron | 25.0% |
! | AGTATATGTATAGATTGCTT+TGG | - | chr3_3:84791861-84791880 | None:intergenic | 25.0% |
! | TAAAGTTATTGTCATGGAAA+TGG | - | chr3_3:84792100-84792119 | None:intergenic | 25.0% |
! | AAGGAATAAAGTTATTGTCA+TGG | - | chr3_3:84792106-84792125 | None:intergenic | 25.0% |
! | TCTAATTTCCTTCAGTTTAA+GGG | - | chr3_3:84792260-84792279 | None:intergenic | 25.0% |
! | AAAGATAATCTAGTCAAAAG+AGG | - | chr3_3:84792437-84792456 | None:intergenic | 25.0% |
!! | TTGACTAGATTATCTTTTGT+CGG | + | chr3_3:84792440-84792459 | Msa0479700:intron | 25.0% |
!! | ACCAAAACTGAAACTTTTAA+AGG | + | chr3_3:84792488-84792507 | Msa0479700:intron | 25.0% |
!!! | ACCTTTAAAAGTTTCAGTTT+TGG | - | chr3_3:84792492-84792511 | None:intergenic | 25.0% |
! | AATAATAGAAAAGGTTCAAG+GGG | - | chr3_3:84792654-84792673 | None:intergenic | 25.0% |
! | GAAATAATAGAAAAGGTTCA+AGG | - | chr3_3:84792656-84792675 | None:intergenic | 25.0% |
! | ATCTTTGATGAATAGATATC+CGG | - | chr3_3:84792800-84792819 | None:intergenic | 25.0% |
! | GATATTCAAAATATTGAGAG+GGG | - | chr3_3:84792925-84792944 | None:intergenic | 25.0% |
! | GAGATATTCAAAATATTGAG+AGG | - | chr3_3:84792927-84792946 | None:intergenic | 25.0% |
! | AGTAAATATGGTGAAACAAA+TGG | - | chr3_3:84792991-84793010 | None:intergenic | 25.0% |
! | ATTTGTTTCACCATATTTAC+TGG | + | chr3_3:84792990-84793009 | Msa0479700:intron | 25.0% |
!!! | TTTAGCTTTATTGGGTAAAT+GGG | - | chr3_3:84793064-84793083 | None:intergenic | 25.0% |
!!! | ATTTAGCTTTATTGGGTAAA+TGG | - | chr3_3:84793065-84793084 | None:intergenic | 25.0% |
! | AGAATCTAGGAAAATCAATT+GGG | - | chr3_3:84793157-84793176 | None:intergenic | 25.0% |
! | TAGAATCTAGGAAAATCAAT+TGG | - | chr3_3:84793158-84793177 | None:intergenic | 25.0% |
!!! | TTAAAAATTTTTTGTGGGGT+GGG | - | chr3_3:84793185-84793204 | None:intergenic | 25.0% |
!!! | TTTAAAAATTTTTTGTGGGG+TGG | - | chr3_3:84793186-84793205 | None:intergenic | 25.0% |
!!! | CTATTTTTTGTCTTTCTTCA+AGG | - | chr3_3:84793244-84793263 | None:intergenic | 25.0% |
! | AAGAAAGACAAAAAATAGAC+AGG | + | chr3_3:84793246-84793265 | Msa0479700:intron | 25.0% |
! | AATAATAGACACCTTTCTAT+CGG | - | chr3_3:84793312-84793331 | None:intergenic | 25.0% |
!! | TATTTACCTTTCAAGTACTT+AGG | - | chr3_3:84793417-84793436 | None:intergenic | 25.0% |
!! | TTTCACAAAAGTCTTTTAGT+CGG | - | chr3_3:84793501-84793520 | None:intergenic | 25.0% |
!!! | TTTATGTCAGTTTTAGTGAA+TGG | - | chr3_3:84793807-84793826 | None:intergenic | 25.0% |
! | ACTAATAGCTAATGAATTAG+TGG | - | chr3_3:84793988-84794007 | None:intergenic | 25.0% |
! | ATTACTGAATTTCATTCCAA+CGG | - | chr3_3:84794227-84794246 | None:intergenic | 25.0% |
!!! | AGGTAATCAAAGTTGATTTT+CGG | - | chr3_3:84794256-84794275 | None:intergenic | 25.0% |
! | AGAGATAAAAAATGCAGTTT+GGG | - | chr3_3:84794345-84794364 | None:intergenic | 25.0% |
! | AAGAGATAAAAAATGCAGTT+TGG | - | chr3_3:84794346-84794365 | None:intergenic | 25.0% |
! | TTCAAATTTCACAATTGTGT+GGG | + | chr3_3:84794582-84794601 | Msa0479700:intron | 25.0% |
! | AAAAGAAAATGCAGAGAAAT+TGG | - | chr3_3:84794887-84794906 | None:intergenic | 25.0% |
! | ACATAATTGATATAGGGATT+TGG | - | chr3_3:84795187-84795206 | None:intergenic | 25.0% |
! | GGAGAAAACATAATTGATAT+AGG | - | chr3_3:84795194-84795213 | None:intergenic | 25.0% |
!!! | TTCCGTTTATTTTAGCAATT+GGG | - | chr3_3:84795339-84795358 | None:intergenic | 25.0% |
!!! | TTTCCGTTTATTTTAGCAAT+TGG | - | chr3_3:84795340-84795359 | None:intergenic | 25.0% |
!!! | GGACACTTTTTTTTAGTAAA+TGG | - | chr3_3:84796075-84796094 | None:intergenic | 25.0% |
! | TATTGAAAATTGAAATGGGT+CGG | - | chr3_3:84796106-84796125 | None:intergenic | 25.0% |
! | GAAAGTGGAATATATTGTAT+TGG | - | chr3_3:84796185-84796204 | None:intergenic | 25.0% |
! | ATCTGTGTGAAAAATCAAAT+TGG | + | chr3_3:84796229-84796248 | Msa0479700:intron | 25.0% |
! | TTCCTCATTCTATATATCTT+TGG | + | chr3_3:84796985-84797004 | Msa0479700:intron | 25.0% |
! | AACCAAAGATATATAGAATG+AGG | - | chr3_3:84796990-84797009 | None:intergenic | 25.0% |
!! | AAGGGGAAAGTATATTTAAA+AGG | - | chr3_3:84797015-84797034 | None:intergenic | 25.0% |
! | AGGTATCATGTTAATAGTAT+TGG | + | chr3_3:84797124-84797143 | Msa0479700:intron | 25.0% |
!!! | ATGTTAATAGTATTGGTTAG+TGG | + | chr3_3:84797131-84797150 | Msa0479700:intron | 25.0% |
!!! | GATTAATTTTTGTTTGCAGA+TGG | + | chr3_3:84797690-84797709 | Msa0479700:intron | 25.0% |
! | ACAGTTTCTATAGATAAAGA+AGG | - | chr3_3:84797830-84797849 | None:intergenic | 25.0% |
! | TAAACAAACAAAATGTCTAC+TGG | - | chr3_3:84797949-84797968 | None:intergenic | 25.0% |
! | ACTAAAATTAAGACAAAGAC+GGG | - | chr3_3:84797982-84798001 | None:intergenic | 25.0% |
CAGTTTGAAAATGAACCAAA+TGG | - | chr3_3:84790988-84791007 | None:intergenic | 30.0% | |
AAACTTATTACTAGTCAAGG+AGG | + | chr3_3:84791087-84791106 | Msa0479700:intron | 30.0% | |
! | TTTAGTGCTGTATTCACTTT+TGG | - | chr3_3:84791471-84791490 | None:intergenic | 30.0% |
CTACAAAAGCAAATACAATG+AGG | + | chr3_3:84791536-84791555 | Msa0479700:intron | 30.0% | |
! | TTTAATGTTCATCGTCGATT+TGG | - | chr3_3:84791916-84791935 | None:intergenic | 30.0% |
AATAAAGATCACTTAGTGTC+GGG | - | chr3_3:84792006-84792025 | None:intergenic | 30.0% | |
GAATAAAGATCACTTAGTGT+CGG | - | chr3_3:84792007-84792026 | None:intergenic | 30.0% | |
! | TTAAATCCTATGGACTGTTT+GGG | - | chr3_3:84792029-84792048 | None:intergenic | 30.0% |
! | TTTAAATCCTATGGACTGTT+TGG | - | chr3_3:84792030-84792049 | None:intergenic | 30.0% |
GTCTAATTTCCTTCAGTTTA+AGG | - | chr3_3:84792261-84792280 | None:intergenic | 30.0% | |
! | TGACTAGATTATCTTTTGTC+GGG | + | chr3_3:84792441-84792460 | Msa0479700:intron | 30.0% |
TGTGGAGATTAATGCAAAAT+AGG | - | chr3_3:84792469-84792488 | None:intergenic | 30.0% | |
!! | TAAAAGTTTCAGTTTTGGTG+TGG | - | chr3_3:84792487-84792506 | None:intergenic | 30.0% |
GGAGTTGGAAATAATAGAAA+AGG | - | chr3_3:84792663-84792682 | None:intergenic | 30.0% | |
AGAAGAAAAAATGTTGGAGT+TGG | - | chr3_3:84792678-84792697 | None:intergenic | 30.0% | |
TCTTTGATGAATAGATATCC+GGG | - | chr3_3:84792799-84792818 | None:intergenic | 30.0% | |
AATCTATCAGAGAACCAATT+TGG | + | chr3_3:84792883-84792902 | Msa0479700:intron | 30.0% | |
AATGGAAGAATAAATAGGGA+GGG | - | chr3_3:84792973-84792992 | None:intergenic | 30.0% | |
AAATGGAAGAATAAATAGGG+AGG | - | chr3_3:84792974-84792993 | None:intergenic | 30.0% | |
AAAGTTCTGTCCAGTAAATA+TGG | - | chr3_3:84793003-84793022 | None:intergenic | 30.0% | |
TTCAGAAAAAGACAGTTTGT+GGG | - | chr3_3:84793028-84793047 | None:intergenic | 30.0% | |
!! | GCGTTCAATTTAGCTTTATT+GGG | - | chr3_3:84793072-84793091 | None:intergenic | 30.0% |
!! | AGCGTTCAATTTAGCTTTAT+TGG | - | chr3_3:84793073-84793092 | None:intergenic | 30.0% |
!!! | TAAAAATTTTTTGTGGGGTG+GGG | - | chr3_3:84793184-84793203 | None:intergenic | 30.0% |
AGTTTAGAGATTATACCTGA+CGG | + | chr3_3:84793216-84793235 | Msa0479700:intron | 30.0% | |
TGAGAAATCGTTTGTTCAAA+TGG | - | chr3_3:84793335-84793354 | None:intergenic | 30.0% | |
! | TTCACAAAAGTCTTTTAGTC+GGG | - | chr3_3:84793500-84793519 | None:intergenic | 30.0% |
AAAGAGCTGGAAAAATGTTT+GGG | - | chr3_3:84793577-84793596 | None:intergenic | 30.0% | |
AAAAGAGCTGGAAAAATGTT+TGG | - | chr3_3:84793578-84793597 | None:intergenic | 30.0% | |
! | TCAAAGTATCATCAGCATAT+TGG | + | chr3_3:84793607-84793626 | Msa0479700:intron | 30.0% |
!! | TTATTTGAAGGGTATCAGTT+TGG | - | chr3_3:84793660-84793679 | None:intergenic | 30.0% |
TGCAATTGGACTTATTTGAA+GGG | - | chr3_3:84793671-84793690 | None:intergenic | 30.0% | |
CAAATGGAGAAATTGGATTT+CGG | - | chr3_3:84793847-84793866 | None:intergenic | 30.0% | |
TTTGTGTCAAATGGAGAAAT+TGG | - | chr3_3:84793854-84793873 | None:intergenic | 30.0% | |
! | GAACTATTTAGTCTTTGTGA+TGG | - | chr3_3:84793889-84793908 | None:intergenic | 30.0% |
ATTCTTGCAAACAGATTGAA+GGG | - | chr3_3:84794080-84794099 | None:intergenic | 30.0% | |
AATTCTTGCAAACAGATTGA+AGG | - | chr3_3:84794081-84794100 | None:intergenic | 30.0% | |
AATACCAAAGATTGAGAATC+CGG | - | chr3_3:84794165-84794184 | None:intergenic | 30.0% | |
CTTTGGTATTAGAGATATGA+AGG | + | chr3_3:84794175-84794194 | Msa0479700:intron | 30.0% | |
! | TGGGTTTCTCAAAGAATTTT+GGG | - | chr3_3:84794279-84794298 | None:intergenic | 30.0% |
! | TTGGGTTTCTCAAAGAATTT+TGG | - | chr3_3:84794280-84794299 | None:intergenic | 30.0% |
CAACATAACTTCATTAACCA+CGG | + | chr3_3:84794408-84794427 | Msa0479700:intron | 30.0% | |
ATTAATCACGTTTAAATCCG+TGG | - | chr3_3:84794428-84794447 | None:intergenic | 30.0% | |
GTTCAAATTTCACAATTGTG+TGG | + | chr3_3:84794581-84794600 | Msa0479700:intron | 30.0% | |
! | ATCATTAACATGATTTGCGA+TGG | + | chr3_3:84794813-84794832 | Msa0479700:CDS | 30.0% |
TAATTGATATAGGGATTTGG+TGG | - | chr3_3:84795184-84795203 | None:intergenic | 30.0% | |
! | TGTTTTCTCCTTCAACATTA+AGG | + | chr3_3:84795204-84795223 | Msa0479700:intron | 30.0% |
AGTTGAAACCTTAATGTTGA+AGG | - | chr3_3:84795215-84795234 | None:intergenic | 30.0% | |
! | TAAGGTTTCAACTTTTGTTG+CGG | + | chr3_3:84795222-84795241 | Msa0479700:intron | 30.0% |
! | TGTACATGCAAATTTTCCTT+CGG | + | chr3_3:84795257-84795276 | Msa0479700:CDS | 30.0% |
!!! | GGTATAAAGTTGGTTTTCAT+CGG | - | chr3_3:84795293-84795312 | None:intergenic | 30.0% |
AAATGATTGGGGTATAAAGT+TGG | - | chr3_3:84795303-84795322 | None:intergenic | 30.0% | |
!!! | TCCGTTTATTTTAGCAATTG+GGG | - | chr3_3:84795338-84795357 | None:intergenic | 30.0% |
AAAGGAGGTTATATCTCTTA+AGG | - | chr3_3:84795401-84795420 | None:intergenic | 30.0% | |
TCTTGCTGCAAATTAGAATA+TGG | - | chr3_3:84795909-84795928 | None:intergenic | 30.0% | |
TGTATAAATAAAGGGGAAAG+TGG | - | chr3_3:84796200-84796219 | None:intergenic | 30.0% | |
TGTCATCACAAACTAAGTTA+AGG | - | chr3_3:84796290-84796309 | None:intergenic | 30.0% | |
TTGTGTGCAGTATTACTTAA+AGG | + | chr3_3:84796319-84796338 | Msa0479700:intron | 30.0% | |
ACCAGAAATGATCATTAAGT+CGG | - | chr3_3:84796375-84796394 | None:intergenic | 30.0% | |
GTAGATTTGACAAGACAAAA+AGG | - | chr3_3:84796480-84796499 | None:intergenic | 30.0% | |
ATTAAGGTATACGTGTTTAC+AGG | + | chr3_3:84796899-84796918 | Msa0479700:intron | 30.0% | |
! | CTTCCTTTTATTGTGTTCTT+AGG | - | chr3_3:84797229-84797248 | None:intergenic | 30.0% |
CAATAAAAGGAAGACATGAT+TGG | + | chr3_3:84797236-84797255 | Msa0479700:intron | 30.0% | |
TTTCTCACTTATCTTCTTTC+AGG | + | chr3_3:84797366-84797385 | Msa0479700:intron | 30.0% | |
TTCTCACTTATCTTCTTTCA+GGG | + | chr3_3:84797367-84797386 | Msa0479700:intron | 30.0% | |
TAGAGCTGAAAAAAGAGAAT+AGG | - | chr3_3:84797536-84797555 | None:intergenic | 30.0% | |
!! | AGCTCTATTTCTATCTGAAA+AGG | + | chr3_3:84797549-84797568 | Msa0479700:intron | 30.0% |
AATGTGTATTGGAATTGCTT+CGG | + | chr3_3:84797600-84797619 | Msa0479700:CDS | 30.0% | |
TATGTCCATCTAACTCAAAA+TGG | - | chr3_3:84797755-84797774 | None:intergenic | 30.0% | |
TCGTCAATATTTACTCATAG+TGG | + | chr3_3:84797801-84797820 | Msa0479700:three_prime_UTR | 30.0% | |
GTGATCTCTCTGATAAGTAT+GGG | + | chr3_3:84790600-84790619 | Msa0479700:CDS | 35.0% | |
!! | AAGTAGAAAGAAGTACCCAA+GGG | - | chr3_3:84790668-84790687 | None:intergenic | 35.0% |
!! | AAAGTAGAAAGAAGTACCCA+AGG | - | chr3_3:84790669-84790688 | None:intergenic | 35.0% |
TCATACTAGTAGGTTCCATT+TGG | + | chr3_3:84790970-84790989 | Msa0479700:intron | 35.0% | |
GTTTGAGAATCTAGCATTCA+TGG | + | chr3_3:84791277-84791296 | Msa0479700:intron | 35.0% | |
AGTAGTTGTTAGTGGAGTTT+GGG | - | chr3_3:84791518-84791537 | None:intergenic | 35.0% | |
TAGTAGTTGTTAGTGGAGTT+TGG | - | chr3_3:84791519-84791538 | None:intergenic | 35.0% | |
! | GCTTTTGTAGTAGTTGTTAG+TGG | - | chr3_3:84791526-84791545 | None:intergenic | 35.0% |
!!! | TGATTGGTCTTTTTAGGAGT+GGG | - | chr3_3:84791642-84791661 | None:intergenic | 35.0% |
ATCAGCATTCTACCTCTAAT+TGG | - | chr3_3:84791702-84791721 | None:intergenic | 35.0% | |
ATACTGCAGAAATAGCTCAA+AGG | + | chr3_3:84791762-84791781 | Msa0479700:intron | 35.0% | |
TTGTGCTTCTTCATCAATTG+GGG | - | chr3_3:84791796-84791815 | None:intergenic | 35.0% | |
CTTGTGCTTCTTCATCAATT+GGG | - | chr3_3:84791797-84791816 | None:intergenic | 35.0% | |
! | AGAGTTTGTTTATGTGCTTC+TGG | - | chr3_3:84791838-84791857 | None:intergenic | 35.0% |
ATCAATATGTTCCTTAGGCT+GGG | - | chr3_3:84791889-84791908 | None:intergenic | 35.0% | |
TATCAATATGTTCCTTAGGC+TGG | - | chr3_3:84791890-84791909 | None:intergenic | 35.0% | |
GTGCTATCAATATGTTCCTT+AGG | - | chr3_3:84791894-84791913 | None:intergenic | 35.0% | |
TTTATTCCCAAACAGTCCAT+AGG | + | chr3_3:84792020-84792039 | Msa0479700:intron | 35.0% | |
!! | TCACTGGTCTTTAAATCCTA+TGG | - | chr3_3:84792039-84792058 | None:intergenic | 35.0% |
TGCATTTGGATATTGTGGAA+AGG | - | chr3_3:84792182-84792201 | None:intergenic | 35.0% | |
ATGCTTGCATTTGGATATTG+TGG | - | chr3_3:84792187-84792206 | None:intergenic | 35.0% | |
AAGTTATGTTCGTTTGGATG+TGG | - | chr3_3:84792395-84792414 | None:intergenic | 35.0% | |
TCGCAAAAGTTATGTTCGTT+TGG | - | chr3_3:84792401-84792420 | None:intergenic | 35.0% | |
ATCGATCATAGAAGGATATG+TGG | - | chr3_3:84792558-84792577 | None:intergenic | 35.0% | |
GCTTATTCATCGATCATAGA+AGG | - | chr3_3:84792566-84792585 | None:intergenic | 35.0% | |
TAGAAATGGCTATTCGGTAA+AGG | - | chr3_3:84792591-84792610 | None:intergenic | 35.0% | |
AGAAGATGAGGAAGATAAGT+GGG | - | chr3_3:84792621-84792640 | None:intergenic | 35.0% | |
AAGAAGATGAGGAAGATAAG+TGG | - | chr3_3:84792622-84792641 | None:intergenic | 35.0% | |
GACGGAAGAAGAAAAAATGT+TGG | - | chr3_3:84792684-84792703 | None:intergenic | 35.0% | |
TCATTGAAAGAAGTGATGCA+GGG | - | chr3_3:84792745-84792764 | None:intergenic | 35.0% | |
TTCATTGAAAGAAGTGATGC+AGG | - | chr3_3:84792746-84792765 | None:intergenic | 35.0% | |
CTTTGATGAATAGATATCCG+GGG | - | chr3_3:84792798-84792817 | None:intergenic | 35.0% | |
GATAGATTGAGGAGGAATAT+AGG | - | chr3_3:84792871-84792890 | None:intergenic | 35.0% | |
! | ATTGGTTCTCTGATAGATTG+AGG | - | chr3_3:84792882-84792901 | None:intergenic | 35.0% |
TCTGGGGATTTAAACCAAAT+TGG | - | chr3_3:84792900-84792919 | None:intergenic | 35.0% | |
ATGGAAGAATAAATAGGGAG+GGG | - | chr3_3:84792972-84792991 | None:intergenic | 35.0% | |
GTTCAGAAAAAGACAGTTTG+TGG | - | chr3_3:84793029-84793048 | None:intergenic | 35.0% | |
CTTTATTGGGTAAATGGGAA+TGG | - | chr3_3:84793059-84793078 | None:intergenic | 35.0% | |
GTTTGTCGAGTTAAAGAAGA+GGG | - | chr3_3:84793120-84793139 | None:intergenic | 35.0% | |
AGTTTGTCGAGTTAAAGAAG+AGG | - | chr3_3:84793121-84793140 | None:intergenic | 35.0% | |
!!! | AAAAATTTTTTGTGGGGTGG+GGG | - | chr3_3:84793183-84793202 | None:intergenic | 35.0% |
TAGAATTGTCCTCTTGAAGT+CGG | - | chr3_3:84793286-84793305 | None:intergenic | 35.0% | |
TAACATTCATCAATCGTGGA+TGG | - | chr3_3:84793475-84793494 | None:intergenic | 35.0% | |
! | TCACAAAAGTCTTTTAGTCG+GGG | - | chr3_3:84793499-84793518 | None:intergenic | 35.0% |
CAAATGCATGATTGCCTTAA+TGG | + | chr3_3:84793551-84793570 | Msa0479700:intron | 35.0% | |
GAAAAATGTTTGGGCCATTA+AGG | - | chr3_3:84793568-84793587 | None:intergenic | 35.0% | |
GCTGATGATACTTTGATTGT+GGG | - | chr3_3:84793603-84793622 | None:intergenic | 35.0% | |
TGCTGATGATACTTTGATTG+TGG | - | chr3_3:84793604-84793623 | None:intergenic | 35.0% | |
AAGTATCATCAGCATATTGG+AGG | + | chr3_3:84793610-84793629 | Msa0479700:intron | 35.0% | |
GTGCAATTGGACTTATTTGA+AGG | - | chr3_3:84793672-84793691 | None:intergenic | 35.0% | |
GATGTCAAAATCAGTGCAAT+TGG | - | chr3_3:84793685-84793704 | None:intergenic | 35.0% | |
! | TATTCTTATTGGTGGCTGAA+GGG | - | chr3_3:84793719-84793738 | None:intergenic | 35.0% |
! | TTATTCTTATTGGTGGCTGA+AGG | - | chr3_3:84793720-84793739 | None:intergenic | 35.0% |
GCCACCAATAAGAATAAGAA+CGG | + | chr3_3:84793723-84793742 | Msa0479700:intron | 35.0% | |
ATCGCCGTTCTTATTCTTAT+TGG | - | chr3_3:84793730-84793749 | None:intergenic | 35.0% | |
AAGAATAAGAACGGCGATAA+TGG | + | chr3_3:84793732-84793751 | Msa0479700:intron | 35.0% | |
AGAATAAGAACGGCGATAAT+GGG | + | chr3_3:84793733-84793752 | Msa0479700:intron | 35.0% | |
! | CTGACATAAAAGTTGATCGA+AGG | + | chr3_3:84793817-84793836 | Msa0479700:intron | 35.0% |
! | AGATGGGATTTTGTGTCAAA+TGG | - | chr3_3:84793863-84793882 | None:intergenic | 35.0% |
TTAGTATGCTATCCACCAAT+TGG | + | chr3_3:84794003-84794022 | Msa0479700:intron | 35.0% | |
TTTAATCGGGTGTATGTACA+AGG | - | chr3_3:84794114-84794133 | None:intergenic | 35.0% | |
ATACACCCGATTAAAGAGAT+TGG | + | chr3_3:84794119-84794138 | Msa0479700:intron | 35.0% | |
TTTCGGCCAATCTCTTTAAT+CGG | - | chr3_3:84794128-84794147 | None:intergenic | 35.0% | |
! | GTTTCTCAAAGAATTTTGGG+AGG | - | chr3_3:84794276-84794295 | None:intergenic | 35.0% |
AACCCAAAATTAATGCCATC+CGG | + | chr3_3:84794293-84794312 | Msa0479700:intron | 35.0% | |
TTGGAGAAGAAGATAATGTG+AGG | - | chr3_3:84794391-84794410 | None:intergenic | 35.0% | |
CGTGGTTAATGAAGTTATGT+TGG | - | chr3_3:84794410-84794429 | None:intergenic | 35.0% | |
AAATTTCACAATTGTGTGGG+TGG | + | chr3_3:84794585-84794604 | Msa0479700:intron | 35.0% | |
AATTTCACAATTGTGTGGGT+GGG | + | chr3_3:84794586-84794605 | Msa0479700:intron | 35.0% | |
TACTGCGCAACATATACAAA+AGG | - | chr3_3:84794646-84794665 | None:intergenic | 35.0% | |
TATGTTGCGCAGTAATCAAA+TGG | + | chr3_3:84794652-84794671 | Msa0479700:intron | 35.0% | |
TGTTTGTAATGTACTGCTTC+TGG | + | chr3_3:84794720-84794739 | Msa0479700:intron | 35.0% | |
AGAGGAAGTAGCATTAAAAG+AGG | - | chr3_3:84795151-84795170 | None:intergenic | 35.0% | |
! | GTACATGCAAATTTTCCTTC+GGG | + | chr3_3:84795258-84795277 | Msa0479700:CDS | 35.0% |
TATACCCCAATCATTTCACA+AGG | + | chr3_3:84795307-84795326 | Msa0479700:CDS | 35.0% | |
CTTTCCTTGTGAAATGATTG+GGG | - | chr3_3:84795314-84795333 | None:intergenic | 35.0% | |
GCTTTCCTTGTGAAATGATT+GGG | - | chr3_3:84795315-84795334 | None:intergenic | 35.0% | |
!!! | CCGTTTATTTTAGCAATTGG+GGG | - | chr3_3:84795337-84795356 | None:intergenic | 35.0% |
CCCCCAATTGCTAAAATAAA+CGG | + | chr3_3:84795334-84795353 | Msa0479700:CDS | 35.0% | |
TAACCTCCTTTCTCAATAGT+AGG | + | chr3_3:84795410-84795429 | Msa0479700:CDS | 35.0% | |
!!! | GCTTGTTTTGCACTGTAAAT+TGG | + | chr3_3:84795489-84795508 | Msa0479700:intron | 35.0% |
TGTGGAATTTAAGGATAACC+TGG | + | chr3_3:84795575-84795594 | Msa0479700:intron | 35.0% | |
TTTCATAGCAACAAGGTAGA+TGG | - | chr3_3:84795673-84795692 | None:intergenic | 35.0% | |
ACGTGTGATATGCTTTGATA+TGG | + | chr3_3:84795754-84795773 | Msa0479700:intron | 35.0% | |
GCTGCAAATTAGAATATGGA+TGG | - | chr3_3:84795905-84795924 | None:intergenic | 35.0% | |
ATACCATCATTGAACCATGA+AGG | - | chr3_3:84795984-84796003 | None:intergenic | 35.0% | |
AGTAAATGGGTCAGATATTC+CGG | - | chr3_3:84796061-84796080 | None:intergenic | 35.0% | |
!! | TGAAATGGGTCGGTTATTTT+GGG | - | chr3_3:84796096-84796115 | None:intergenic | 35.0% |
! | TTGAAATGGGTCGGTTATTT+TGG | - | chr3_3:84796097-84796116 | None:intergenic | 35.0% |
TCAAATTGGACCAGATATTC+TGG | + | chr3_3:84796243-84796262 | Msa0479700:intron | 35.0% | |
TGCAGTATTACTTAAAGGCT+CGG | + | chr3_3:84796324-84796343 | Msa0479700:intron | 35.0% | |
!! | ATGATCATTTCTGGTATTGC+AGG | + | chr3_3:84796380-84796399 | Msa0479700:CDS | 35.0% |
!! | TGATCATTTCTGGTATTGCA+GGG | + | chr3_3:84796381-84796400 | Msa0479700:CDS | 35.0% |
!!! | CCTATTTTTGCTCCTACTTT+GGG | + | chr3_3:84796563-84796582 | Msa0479700:CDS | 35.0% |
TGTTCATTTACAGCATAGCA+TGG | + | chr3_3:84796722-84796741 | Msa0479700:CDS | 35.0% | |
TGAGGAATAAAACTCACACA+CGG | - | chr3_3:84796972-84796991 | None:intergenic | 35.0% | |
ATTAACATGATACCTGCTCA+CGG | - | chr3_3:84797119-84797138 | None:intergenic | 35.0% | |
GCACCTAAGAACACAATAAA+AGG | + | chr3_3:84797223-84797242 | Msa0479700:intron | 35.0% | |
ACTTATCTTCTTTCAGGGAA+GGG | + | chr3_3:84797372-84797391 | Msa0479700:intron | 35.0% | |
GCAATATGAACATGCATGAT+GGG | - | chr3_3:84797491-84797510 | None:intergenic | 35.0% | |
AGCAATATGAACATGCATGA+TGG | - | chr3_3:84797492-84797511 | None:intergenic | 35.0% | |
!!! | AAGGCACCTTTTAATTTTCC+TGG | + | chr3_3:84797568-84797587 | Msa0479700:CDS | 35.0% |
CTGAAGCCAGGAAAATTAAA+AGG | - | chr3_3:84797577-84797596 | None:intergenic | 35.0% | |
ATACACATTATACTGAAGCC+AGG | - | chr3_3:84797589-84797608 | None:intergenic | 35.0% | |
GGCTTCAGTATAATGTGTAT+TGG | + | chr3_3:84797589-84797608 | Msa0479700:CDS | 35.0% | |
!!! | TCCTTCCATTTTGAGTTAGA+TGG | + | chr3_3:84797747-84797766 | Msa0479700:exon | 35.0% |
TCCATCTAACTCAAAATGGA+AGG | - | chr3_3:84797751-84797770 | None:intergenic | 35.0% | |
! | TAGAAACTGTGCTTTTGATG+AGG | + | chr3_3:84797840-84797859 | Msa0479700:three_prime_UTR | 35.0% |
!! | CTTGTGATGATGCCCATTTT+GGG | + | chr3_3:84790578-84790597 | Msa0479700:CDS | 40.0% |
TCAGAGAGATCACCCAAAAT+GGG | - | chr3_3:84790593-84790612 | None:intergenic | 40.0% | |
ATCAGAGAGATCACCCAAAA+TGG | - | chr3_3:84790594-84790613 | None:intergenic | 40.0% | |
GGTGATCTCTCTGATAAGTA+TGG | + | chr3_3:84790599-84790618 | Msa0479700:CDS | 40.0% | |
ATCTCTCTGATAAGTATGGG+AGG | + | chr3_3:84790603-84790622 | Msa0479700:CDS | 40.0% | |
GGATAATCATGAGGGTCATA+GGG | - | chr3_3:84790646-84790665 | None:intergenic | 40.0% | |
!! | AGTAGAAAGAAGTACCCAAG+GGG | - | chr3_3:84790667-84790686 | None:intergenic | 40.0% |
! | TCTCTAGTGGAGGTATACAA+TGG | + | chr3_3:84791235-84791254 | Msa0479700:intron | 40.0% |
!! | AGTGCTGTATTCACTTTTGG+TGG | - | chr3_3:84791468-84791487 | None:intergenic | 40.0% |
!!! | GATTGGTCTTTTTAGGAGTG+GGG | - | chr3_3:84791641-84791660 | None:intergenic | 40.0% |
!!! | CTGATTGGTCTTTTTAGGAG+TGG | - | chr3_3:84791643-84791662 | None:intergenic | 40.0% |
CAGATGTTTGAGCTCTTGTT+CGG | - | chr3_3:84791668-84791687 | None:intergenic | 40.0% | |
AGCTCAAACATCTGCTAAAC+TGG | + | chr3_3:84791674-84791693 | Msa0479700:intron | 40.0% | |
GCTAAACTGGAACCAATTAG+AGG | + | chr3_3:84791687-84791706 | Msa0479700:intron | 40.0% | |
TTCTGCAGTATCTGACACAA+TGG | - | chr3_3:84791753-84791772 | None:intergenic | 40.0% | |
GCTTGTGCTTCTTCATCAAT+TGG | - | chr3_3:84791798-84791817 | None:intergenic | 40.0% | |
!!! | TCTGGTTTTAGCTTTGGCTT+GGG | - | chr3_3:84791820-84791839 | None:intergenic | 40.0% |
!!! | TTCTGGTTTTAGCTTTGGCT+TGG | - | chr3_3:84791821-84791840 | None:intergenic | 40.0% |
!!! | TGTGCTTCTGGTTTTAGCTT+TGG | - | chr3_3:84791826-84791845 | None:intergenic | 40.0% |
! | TAGTGTCGGGAAAGTAGAAT+TGG | - | chr3_3:84791993-84792012 | None:intergenic | 40.0% |
! | TTTAAACCCATGTAGCTTGC+AGG | + | chr3_3:84792070-84792089 | Msa0479700:intron | 40.0% |
AAAATGGATCGCTGGAAACT+TGG | - | chr3_3:84792133-84792152 | None:intergenic | 40.0% | |
CAAAGACAAAAATGGATCGC+TGG | - | chr3_3:84792141-84792160 | None:intergenic | 40.0% | |
TCATCTGGTATGCTTGCATT+TGG | - | chr3_3:84792196-84792215 | None:intergenic | 40.0% | |
TTTAAGGGTCTGATAGCAAG+TGG | - | chr3_3:84792245-84792264 | None:intergenic | 40.0% | |
CTATCAGACCCTTAAACTGA+AGG | + | chr3_3:84792249-84792268 | Msa0479700:intron | 40.0% | |
! | AGCTGTATTTTGTAACGCAC+TGG | + | chr3_3:84792283-84792302 | Msa0479700:intron | 40.0% |
!! | TTTGGCAGCAGGTTCTAAAA+TGG | - | chr3_3:84792319-84792338 | None:intergenic | 40.0% |
TTCGTTTGGATGTGGAAAAG+AGG | - | chr3_3:84792387-84792406 | None:intergenic | 40.0% | |
CTGGTCTAGAAATGGCTATT+CGG | - | chr3_3:84792597-84792616 | None:intergenic | 40.0% | |
GGTTCGATGTAAAGAAGATG+AGG | - | chr3_3:84792633-84792652 | None:intergenic | 40.0% | |
ATTGAAAGAAGTGATGCAGG+GGG | - | chr3_3:84792743-84792762 | None:intergenic | 40.0% | |
CATTGAAAGAAGTGATGCAG+GGG | - | chr3_3:84792744-84792763 | None:intergenic | 40.0% | |
! | CTCTTTTGTGGATAGATCCT+TGG | - | chr3_3:84792834-84792853 | None:intergenic | 40.0% |
! | GTGGTGAAGAAACTCTTTTG+TGG | - | chr3_3:84792846-84792865 | None:intergenic | 40.0% |
TTGAGGAGGAATATAGGAAG+TGG | - | chr3_3:84792865-84792884 | None:intergenic | 40.0% | |
AAATATTGAGAGGGGAGTCT+GGG | - | chr3_3:84792917-84792936 | None:intergenic | 40.0% | |
AAAATATTGAGAGGGGAGTC+TGG | - | chr3_3:84792918-84792937 | None:intergenic | 40.0% | |
GTTAAAGAAGAGGGATGGTT+GGG | - | chr3_3:84793111-84793130 | None:intergenic | 40.0% | |
AGTTAAAGAAGAGGGATGGT+TGG | - | chr3_3:84793112-84793131 | None:intergenic | 40.0% | |
GGAAAATCAATTGGGTTCAG+TGG | - | chr3_3:84793149-84793168 | None:intergenic | 40.0% | |
!!! | AAAATTTTTTGTGGGGTGGG+GGG | - | chr3_3:84793182-84793201 | None:intergenic | 40.0% |
CAATTCTACCACCGATAGAA+AGG | + | chr3_3:84793298-84793317 | Msa0479700:intron | 40.0% | |
AATAGACACCTTTCTATCGG+TGG | - | chr3_3:84793309-84793328 | None:intergenic | 40.0% | |
AAGTACTTAGGTCTTCCGAT+TGG | - | chr3_3:84793405-84793424 | None:intergenic | 40.0% | |
GGAAGACCTAAGTACTTGAA+AGG | + | chr3_3:84793408-84793427 | Msa0479700:intron | 40.0% | |
! | GTGTGTTAAGTTGCAGATTG+GGG | - | chr3_3:84793440-84793459 | None:intergenic | 40.0% |
! | GGTGTGTTAAGTTGCAGATT+GGG | - | chr3_3:84793441-84793460 | None:intergenic | 40.0% |
! | AGGTGTGTTAAGTTGCAGAT+TGG | - | chr3_3:84793442-84793461 | None:intergenic | 40.0% |
GGGTTAACATTCATCAATCG+TGG | - | chr3_3:84793479-84793498 | None:intergenic | 40.0% | |
TGATTGTGGGTAAAAAGAGC+TGG | - | chr3_3:84793590-84793609 | None:intergenic | 40.0% | |
!! | TTTGAAGGGTATCAGTTTGG+TGG | - | chr3_3:84793657-84793676 | None:intergenic | 40.0% |
GCCGTTCTTATTCTTATTGG+TGG | - | chr3_3:84793727-84793746 | None:intergenic | 40.0% | |
!! | CTACCGAAGAATTTGGTGTT+GGG | - | chr3_3:84793779-84793798 | None:intergenic | 40.0% |
! | GTCTTTGTGATGGAGAAGAT+GGG | - | chr3_3:84793879-84793898 | None:intergenic | 40.0% |
! | AGTCTTTGTGATGGAGAAGA+TGG | - | chr3_3:84793880-84793899 | None:intergenic | 40.0% |
! | CTTTGAAAAAGCCTACGACT+CGG | - | chr3_3:84793919-84793938 | None:intergenic | 40.0% |
! | CACTTCCTTTTTCCTTCTCT+TGG | + | chr3_3:84793956-84793975 | Msa0479700:intron | 40.0% |
ACACAATCTGCTTTCTTGGA+GGG | - | chr3_3:84794032-84794051 | None:intergenic | 40.0% | |
AACACAATCTGCTTTCTTGG+AGG | - | chr3_3:84794033-84794052 | None:intergenic | 40.0% | |
TTCGGCCAATCTCTTTAATC+GGG | - | chr3_3:84794127-84794146 | None:intergenic | 40.0% | |
CGGTGAAATTGAACGAGTTT+CGG | - | chr3_3:84794145-84794164 | None:intergenic | 40.0% | |
CGAAACTCGTTCAATTTCAC+CGG | + | chr3_3:84794143-84794162 | Msa0479700:intron | 40.0% | |
TTCACCGGATTCTCAATCTT+TGG | + | chr3_3:84794158-84794177 | Msa0479700:intron | 40.0% | |
! | GTCCGGATGGCATTAATTTT+GGG | - | chr3_3:84794298-84794317 | None:intergenic | 40.0% |
AATGGCATCGCACACATTAA+TGG | + | chr3_3:84794670-84794689 | Msa0479700:intron | 40.0% | |
! | AGTGCATTTGGAGTTCTTTC+AGG | + | chr3_3:84795044-84795063 | Msa0479700:CDS | 40.0% |
! | GTGCATTTGGAGTTCTTTCA+GGG | + | chr3_3:84795045-84795064 | Msa0479700:CDS | 40.0% |
! | TTTGGAGTTCTTTCAGGGAT+AGG | + | chr3_3:84795050-84795069 | Msa0479700:CDS | 40.0% |
! | TTTGGTGGCAACTAAACTAG+AGG | - | chr3_3:84795169-84795188 | None:intergenic | 40.0% |
GGCTTTCCTTGTGAAATGAT+TGG | - | chr3_3:84795316-84795335 | None:intergenic | 40.0% | |
GAGCTCAATGCTTTCAAAAG+TGG | - | chr3_3:84795379-84795398 | None:intergenic | 40.0% | |
ACACCTACTATTGAGAAAGG+AGG | - | chr3_3:84795416-84795435 | None:intergenic | 40.0% | |
GTCACACCTACTATTGAGAA+AGG | - | chr3_3:84795419-84795438 | None:intergenic | 40.0% | |
GTTAACATGCATGATAGTCC+AGG | - | chr3_3:84795596-84795615 | None:intergenic | 40.0% | |
GTAAATGGGTCAGATATTCC+GGG | - | chr3_3:84796060-84796079 | None:intergenic | 40.0% | |
TTGGACCAGATATTCTGGTA+CGG | + | chr3_3:84796248-84796267 | Msa0479700:intron | 40.0% | |
! | GCCGACTTAATGATCATTTC+TGG | + | chr3_3:84796371-84796390 | Msa0479700:CDS | 40.0% |
!!! | GCCTATTTTTGCTCCTACTT+TGG | + | chr3_3:84796562-84796581 | Msa0479700:CDS | 40.0% |
CCCAAAGTAGGAGCAAAAAT+AGG | - | chr3_3:84796566-84796585 | None:intergenic | 40.0% | |
TTAACATGATACCTGCTCAC+GGG | - | chr3_3:84797118-84797137 | None:intergenic | 40.0% | |
GGAACACAGTCAACTTCTAA+TGG | + | chr3_3:84797257-84797276 | Msa0479700:intron | 40.0% | |
CACTTATCTTCTTTCAGGGA+AGG | + | chr3_3:84797371-84797390 | Msa0479700:intron | 40.0% | |
TGCACATATTGTATCTCCCT+TGG | + | chr3_3:84797426-84797445 | Msa0479700:CDS | 40.0% | |
GTTAATGGAGAGAAAGCCAA+GGG | - | chr3_3:84797445-84797464 | None:intergenic | 40.0% | |
! | CTTGGCTTTCTCTCCATTAA+CGG | + | chr3_3:84797444-84797463 | Msa0479700:CDS | 40.0% |
! | TTGGCTTTCTCTCCATTAAC+GGG | + | chr3_3:84797445-84797464 | Msa0479700:CDS | 40.0% |
TCAGAGTATGATGCTTAGAG+TGG | + | chr3_3:84797723-84797742 | Msa0479700:CDS | 40.0% | |
!! | GCTTGTGATGATGCCCATTT+TGG | + | chr3_3:84790577-84790596 | Msa0479700:CDS | 45.0% |
CTCTGATAAGTATGGGAGGA+AGG | + | chr3_3:84790607-84790626 | Msa0479700:CDS | 45.0% | |
GGGATAATCATGAGGGTCAT+AGG | - | chr3_3:84790647-84790666 | None:intergenic | 45.0% | |
ACCCTCATGATTATCCCCTT+GGG | + | chr3_3:84790650-84790669 | Msa0479700:CDS | 45.0% | |
ACCCAAGGGGATAATCATGA+GGG | - | chr3_3:84790654-84790673 | None:intergenic | 45.0% | |
TACCCAAGGGGATAATCATG+AGG | - | chr3_3:84790655-84790674 | None:intergenic | 45.0% | |
!! | TTCACTTTTGGTGGTACCAC+TGG | - | chr3_3:84791459-84791478 | None:intergenic | 45.0% |
GTTAGTGGAGTTTGGGTGAT+TGG | - | chr3_3:84791511-84791530 | None:intergenic | 45.0% | |
!!! | CGGCTCTGATTGGTCTTTTT+AGG | - | chr3_3:84791648-84791667 | None:intergenic | 45.0% |
TGCTTCTTCATCAATTGGGG+TGG | - | chr3_3:84791793-84791812 | None:intergenic | 45.0% | |
TATACTTCAAGCCCAGCCTA+AGG | + | chr3_3:84791875-84791894 | Msa0479700:intron | 45.0% | |
GCTGCAGTGGAATGTTTGTT+TGG | - | chr3_3:84791942-84791961 | None:intergenic | 45.0% | |
!! | CTTAGCAGAATTTGCTGCAG+TGG | - | chr3_3:84791955-84791974 | None:intergenic | 45.0% |
GGTTAACCTGCAAGCTACAT+GGG | - | chr3_3:84792079-84792098 | None:intergenic | 45.0% | |
TGGTTAACCTGCAAGCTACA+TGG | - | chr3_3:84792080-84792099 | None:intergenic | 45.0% | |
CAGATAGGTTCAGTGTCATC+TGG | - | chr3_3:84792211-84792230 | None:intergenic | 45.0% | |
TGATAGCAAGTGGTAGAGTG+AGG | - | chr3_3:84792235-84792254 | None:intergenic | 45.0% | |
TGAATGCAAGTTAGCAGCTG+AGG | - | chr3_3:84792342-84792361 | None:intergenic | 45.0% | |
!! | AAGTGGGACTGGTCTAGAAA+TGG | - | chr3_3:84792605-84792624 | None:intergenic | 45.0% |
ATGAGGAAGATAAGTGGGAC+TGG | - | chr3_3:84792616-84792635 | None:intergenic | 45.0% | |
GTAGACAAGGCTCTGTTAGA+TGG | - | chr3_3:84792718-84792737 | None:intergenic | 45.0% | |
TTGAAAGAAGTGATGCAGGG+GGG | - | chr3_3:84792742-84792761 | None:intergenic | 45.0% | |
AAAGATCCACCTTCTGTCCA+AGG | + | chr3_3:84792814-84792833 | Msa0479700:intron | 45.0% | |
ATAGATCCTTGGACAGAAGG+TGG | - | chr3_3:84792823-84792842 | None:intergenic | 45.0% | |
TGGATAGATCCTTGGACAGA+AGG | - | chr3_3:84792826-84792845 | None:intergenic | 45.0% | |
GGTTCTCTGATAGATTGAGG+AGG | - | chr3_3:84792879-84792898 | None:intergenic | 45.0% | |
AATATTGAGAGGGGAGTCTG+GGG | - | chr3_3:84792916-84792935 | None:intergenic | 45.0% | |
GTCGAGTTAAAGAAGAGGGA+TGG | - | chr3_3:84793116-84793135 | None:intergenic | 45.0% | |
!!! | AAATTTTTTGTGGGGTGGGG+GGG | - | chr3_3:84793181-84793200 | None:intergenic | 45.0% |
! | CATACAAGACCGACTTCAAG+AGG | + | chr3_3:84793274-84793293 | Msa0479700:intron | 45.0% |
TTTCTCACTACATCCACCAC+AGG | + | chr3_3:84793348-84793367 | Msa0479700:intron | 45.0% | |
CTGCCATGATTACCTCCAAT+CGG | + | chr3_3:84793387-84793406 | Msa0479700:intron | 45.0% | |
CTTCCGATTGGAGGTAATCA+TGG | - | chr3_3:84793393-84793412 | None:intergenic | 45.0% | |
TACTTAGGTCTTCCGATTGG+AGG | - | chr3_3:84793402-84793421 | None:intergenic | 45.0% | |
TCATCAATCGTGGATGGATG+AGG | - | chr3_3:84793469-84793488 | None:intergenic | 45.0% | |
!! | GAAGAATTTGGTGTTGGGAG+GGG | - | chr3_3:84793774-84793793 | None:intergenic | 45.0% |
!! | CGAAGAATTTGGTGTTGGGA+GGG | - | chr3_3:84793775-84793794 | None:intergenic | 45.0% |
CCTCCCAACACCAAATTCTT+CGG | + | chr3_3:84793773-84793792 | Msa0479700:intron | 45.0% | |
!! | CCTACCGAAGAATTTGGTGT+TGG | - | chr3_3:84793780-84793799 | None:intergenic | 45.0% |
CCAACACCAAATTCTTCGGT+AGG | + | chr3_3:84793777-84793796 | Msa0479700:intron | 45.0% | |
GGAAGTCCTACCGAAGAATT+TGG | - | chr3_3:84793786-84793805 | None:intergenic | 45.0% | |
TGACGCCAAGAGAAGGAAAA+AGG | - | chr3_3:84793964-84793983 | None:intergenic | 45.0% | |
GGCAACACAATCTGCTTTCT+TGG | - | chr3_3:84794036-84794055 | None:intergenic | 45.0% | |
TGCAAACAGATTGAAGGGAG+TGG | - | chr3_3:84794075-84794094 | None:intergenic | 45.0% | |
! | GGTCCGGATGGCATTAATTT+TGG | - | chr3_3:84794299-84794318 | None:intergenic | 45.0% |
AAATTAATGCCATCCGGACC+AGG | + | chr3_3:84794299-84794318 | Msa0479700:intron | 45.0% | |
ATGTGAACACCTTACGCTAG+TGG | + | chr3_3:84794478-84794497 | Msa0479700:intron | 45.0% | |
TGGATGATTCGCAGGCATAT+TGG | + | chr3_3:84794740-84794759 | Msa0479700:intron | 45.0% | |
TAACAACGTAAGCTAGAGCG+AGG | - | chr3_3:84794851-84794870 | None:intergenic | 45.0% | |
TAGGCAGATAACGTTCCAGA+AGG | + | chr3_3:84795011-84795030 | Msa0479700:intron | 45.0% | |
! | ATCCGCTGCTCAAACTTTTC+AGG | + | chr3_3:84795115-84795134 | Msa0479700:CDS | 45.0% |
CACCTGAAAAGTTTGAGCAG+CGG | - | chr3_3:84795120-84795139 | None:intergenic | 45.0% | |
! | TCAACTTTTGTTGCGGTGCT+CGG | + | chr3_3:84795229-84795248 | Msa0479700:CDS | 45.0% |
CAAGGTAGATGGCACTGTAA+TGG | - | chr3_3:84795662-84795681 | None:intergenic | 45.0% | |
TTCAGCAACCTTGCAGATGT+TGG | + | chr3_3:84795958-84795977 | Msa0479700:CDS | 45.0% | |
TGGCCTTCATGGTTCAATGA+TGG | + | chr3_3:84795978-84795997 | Msa0479700:CDS | 45.0% | |
ACCAGATATTCTGGTACGGA+GGG | + | chr3_3:84796252-84796271 | Msa0479700:intron | 45.0% | |
CAGCAAAAGACATACCCAAG+AGG | - | chr3_3:84796749-84796768 | None:intergenic | 45.0% | |
GAGAACATTGCAGCAGCATA+AGG | - | chr3_3:84796927-84796946 | None:intergenic | 45.0% | |
TAACATGATACCTGCTCACG+GGG | - | chr3_3:84797117-84797136 | None:intergenic | 45.0% | |
CGTTAATGGAGAGAAAGCCA+AGG | - | chr3_3:84797446-84797465 | None:intergenic | 45.0% | |
ACTTTCCACTCACCCGTTAA+TGG | - | chr3_3:84797460-84797479 | None:intergenic | 45.0% | |
!! | AATATTAATTTATAATATTG+TGG | - | chr3_3:84791140-84791159 | None:intergenic | 5.0% |
!! | AATATTATAAATTAATATTG+TGG | + | chr3_3:84791141-84791160 | Msa0479700:intron | 5.0% |
!! | AATATATTTAATAATTATCT+TGG | - | chr3_3:84791427-84791446 | None:intergenic | 5.0% |
!!! | TTTTAATAGAAATAAAAATT+TGG | - | chr3_3:84795618-84795637 | None:intergenic | 5.0% |
!!! | GTATTTTTTTTTTTTTTTTT+AGG | - | chr3_3:84798027-84798046 | None:intergenic | 5.0% |
! | GGTCATAGGGAGCGTAAGAA+TGG | - | chr3_3:84790633-84790652 | None:intergenic | 50.0% |
GACCCTCATGATTATCCCCT+TGG | + | chr3_3:84790649-84790668 | Msa0479700:CDS | 50.0% | |
AAACCACGAGTCCTCAAGCT+TGG | + | chr3_3:84791615-84791634 | Msa0479700:intron | 50.0% | |
! | AGCTCTTGTTCGGCTCTGAT+TGG | - | chr3_3:84791658-84791677 | None:intergenic | 50.0% |
! | TCGCTGGAAACTTGGCTTGA+AGG | - | chr3_3:84792125-84792144 | None:intergenic | 50.0% |
GTGGTAGAGTGAGGACAGAT+AGG | - | chr3_3:84792226-84792245 | None:intergenic | 50.0% | |
GCAAGTTAGCAGCTGAGGTT+TGG | - | chr3_3:84792337-84792356 | None:intergenic | 50.0% | |
TAGATGGAGGAGGGGTTTGA+CGG | - | chr3_3:84792702-84792721 | None:intergenic | 50.0% | |
AGGCTCTGTTAGATGGAGGA+GGG | - | chr3_3:84792711-84792730 | None:intergenic | 50.0% | |
AAGGCTCTGTTAGATGGAGG+AGG | - | chr3_3:84792712-84792731 | None:intergenic | 50.0% | |
GACAAGGCTCTGTTAGATGG+AGG | - | chr3_3:84792715-84792734 | None:intergenic | 50.0% | |
TGAAAGAAGTGATGCAGGGG+GGG | - | chr3_3:84792741-84792760 | None:intergenic | 50.0% | |
ATATCCGGGGCTCTTTGTGT+TGG | - | chr3_3:84792785-84792804 | None:intergenic | 50.0% | |
TAGGGAGGGGAGACATTGTT+CGG | - | chr3_3:84792959-84792978 | None:intergenic | 50.0% | |
TCTTTCTTCAAGGCTCCGTC+AGG | - | chr3_3:84793234-84793253 | None:intergenic | 50.0% | |
GGAGGTAATCATGGCAGAGA+GGG | - | chr3_3:84793384-84793403 | None:intergenic | 50.0% | |
TGGAGGTAATCATGGCAGAG+AGG | - | chr3_3:84793385-84793404 | None:intergenic | 50.0% | |
TCAATCGTGGATGGATGAGG+TGG | - | chr3_3:84793466-84793485 | None:intergenic | 50.0% | |
!! | GGGTATCAGTTTGGTGGTGA+CGG | - | chr3_3:84793651-84793670 | None:intergenic | 50.0% |
!! | CCGAAGAATTTGGTGTTGGG+AGG | - | chr3_3:84793776-84793795 | None:intergenic | 50.0% |
GTTCCAATCTACCGAGTCGT+AGG | + | chr3_3:84793905-84793924 | Msa0479700:intron | 50.0% | |
!! | AAGCCTACGACTCGGTAGAT+TGG | - | chr3_3:84793911-84793930 | None:intergenic | 50.0% |
! | TAGTGGATGACGCCAAGAGA+AGG | - | chr3_3:84793971-84793990 | None:intergenic | 50.0% |
TTTCTTGGAGGGTCGCCAAT+TGG | - | chr3_3:84794021-84794040 | None:intergenic | 50.0% | |
ACCTCGAACTATACGACCGT+TGG | + | chr3_3:84794208-84794227 | Msa0479700:intron | 50.0% | |
TCCAACGGTCGTATAGTTCG+AGG | - | chr3_3:84794212-84794231 | None:intergenic | 50.0% | |
ACTCGTCAACCACTAGCGTA+AGG | - | chr3_3:84794490-84794509 | None:intergenic | 50.0% | |
ACTGCTTCTGGATGATTCGC+AGG | + | chr3_3:84794732-84794751 | Msa0479700:intron | 50.0% | |
GGTCGAAGAAGCAGTGCATT+TGG | + | chr3_3:84795032-84795051 | Msa0479700:CDS | 50.0% | |
TGTTGCACACACAAACGCTG+AGG | - | chr3_3:84795078-84795097 | None:intergenic | 50.0% | |
CATGAAGGCCAACATCTGCA+AGG | - | chr3_3:84795969-84795988 | None:intergenic | 50.0% | |
!! | CTTGCAGATGTTGGCCTTCA+TGG | + | chr3_3:84795967-84795986 | Msa0479700:CDS | 50.0% |
ATGGGTCAGATATTCCGGGA+CGG | - | chr3_3:84796056-84796075 | None:intergenic | 50.0% | |
GACCAGATATTCTGGTACGG+AGG | + | chr3_3:84796251-84796270 | Msa0479700:intron | 50.0% | |
TCCCTCCGTACCAGAATATC+TGG | - | chr3_3:84796256-84796275 | None:intergenic | 50.0% | |
TATTGCAGGGACTGTGTCAC+AGG | + | chr3_3:84796394-84796413 | Msa0479700:CDS | 50.0% | |
! | TTTTGCTCCTACTTTGGGCG+AGG | + | chr3_3:84796568-84796587 | Msa0479700:CDS | 50.0% |
GAGGCAAGGCTTCTTTCGAT+TGG | + | chr3_3:84796587-84796606 | Msa0479700:CDS | 50.0% | |
ACAGCATAGCATGGTCCTCT+TGG | + | chr3_3:84796731-84796750 | Msa0479700:CDS | 50.0% | |
CAGCATAGCATGGTCCTCTT+GGG | + | chr3_3:84796732-84796751 | Msa0479700:CDS | 50.0% | |
TTCTTTCAGGGAAGGGCTCA+AGG | + | chr3_3:84797379-84797398 | Msa0479700:intron | 50.0% | |
! | TCTCTCCATTAACGGGTGAG+TGG | + | chr3_3:84797452-84797471 | Msa0479700:intron | 50.0% |
CAAGCGAGCTTGCCGATGTT+TGG | - | chr3_3:84792526-84792545 | None:intergenic | 55.0% | |
GGCTCTGTTAGATGGAGGAG+GGG | - | chr3_3:84792710-84792729 | None:intergenic | 55.0% | |
GAAAGAAGTGATGCAGGGGG+GGG | - | chr3_3:84792740-84792759 | None:intergenic | 55.0% | |
TCAGCCAACACAAAGAGCCC+CGG | + | chr3_3:84792778-84792797 | Msa0479700:intron | 55.0% | |
GGAGACATTGTTCGGCATGG+TGG | - | chr3_3:84792951-84792970 | None:intergenic | 55.0% | |
AGGGGAGACATTGTTCGGCA+TGG | - | chr3_3:84792954-84792973 | None:intergenic | 55.0% | |
AGAGGGTCTGTGGAAACCTG+TGG | - | chr3_3:84793367-84793386 | None:intergenic | 55.0% | |
ATCATGGCAGAGAGGGTCTG+TGG | - | chr3_3:84793377-84793396 | None:intergenic | 55.0% | |
!! | TTGGTGTTGGGAGGGGATTG+AGG | - | chr3_3:84793767-84793786 | None:intergenic | 55.0% |
TCGAAAAGTCCTGGTCCGGA+TGG | - | chr3_3:84794311-84794330 | None:intergenic | 55.0% | |
GAGCTCGAAAAGTCCTGGTC+CGG | - | chr3_3:84794315-84794334 | None:intergenic | 55.0% | |
TGCGAGAGCTCGAAAAGTCC+TGG | - | chr3_3:84794320-84794339 | None:intergenic | 55.0% | |
ACGTAAGCTAGAGCGAGGCA+AGG | - | chr3_3:84794846-84794865 | None:intergenic | 55.0% | |
GCACTGCTTCTTCGACCTTC+TGG | - | chr3_3:84795029-84795048 | None:intergenic | 55.0% | |
ATCATGTACTCCCTCCGTCC+CGG | + | chr3_3:84796039-84796058 | Msa0479700:intron | 55.0% | |
GTCAGATATTCCGGGACGGA+GGG | - | chr3_3:84796052-84796071 | None:intergenic | 55.0% | |
AGGGCTCAAGGTTGCATCTC+AGG | + | chr3_3:84797391-84797410 | Msa0479700:CDS | 55.0% | |
TAGGAGTGGGGCCAAGCTTG+AGG | - | chr3_3:84791629-84791648 | None:intergenic | 60.0% | |
AGCAGCTGAGGTTTGGCAGC+AGG | - | chr3_3:84792330-84792349 | None:intergenic | 60.0% | |
GGGTCTGTGGAAACCTGTGG+TGG | - | chr3_3:84793364-84793383 | None:intergenic | 60.0% | |
TCGTGGATGGATGAGGTGGC+AGG | - | chr3_3:84793462-84793481 | None:intergenic | 60.0% | |
GTTGGGAGGGGATTGAGGCA+AGG | - | chr3_3:84793762-84793781 | None:intergenic | 60.0% | |
CTTGGAGGGTCGCCAATTGG+TGG | - | chr3_3:84794018-84794037 | None:intergenic | 60.0% | |
CATCGGCGACTGAATCCCGA+AGG | - | chr3_3:84795276-84795295 | None:intergenic | 60.0% | |
GGTCAGATATTCCGGGACGG+AGG | - | chr3_3:84796053-84796072 | None:intergenic | 60.0% | |
CTCCTACTTTGGGCGAGGCA+AGG | + | chr3_3:84796573-84796592 | Msa0479700:CDS | 60.0% | |
AGCCTTGCCTCGCCCAAAGT+AGG | - | chr3_3:84796578-84796597 | None:intergenic | 60.0% | |
CCTGCTCACGGGGATCAACT+TGG | - | chr3_3:84797107-84797126 | None:intergenic | 60.0% | |
!! | CCAAGTTGATCCCCGTGAGC+AGG | + | chr3_3:84797104-84797123 | Msa0479700:CDS | 60.0% |
GGGCCAAGCTTGAGGACTCG+TGG | - | chr3_3:84791621-84791640 | None:intergenic | 65.0% | |
GATGCAGGGGGGGGTAGACA+AGG | - | chr3_3:84792731-84792750 | None:intergenic | 65.0% | |
GGGGTGGGGGGGTAGAATCT+AGG | - | chr3_3:84793170-84793189 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 84790559 | 84798142 | 84790559 | ID=Msa0479700;Name=Msa0479700 |
chr3_3 | mRNA | 84790559 | 84798142 | 84790559 | ID=Msa0479700-mRNA-1;Parent=Msa0479700;Name=Msa0479700-mRNA-1;_AED=0.16;_eAED=0.16;_QI=1|0.90|1|1|1|1|12|377|359 |
chr3_3 | exon | 84790559 | 84790671 | 84790559 | ID=Msa0479700-mRNA-1:exon:24161;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84794754 | 84794866 | 84794754 | ID=Msa0479700-mRNA-1:exon:24162;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84795014 | 84795136 | 84795014 | ID=Msa0479700-mRNA-1:exon:24163;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84795226 | 84795431 | 84795226 | ID=Msa0479700-mRNA-1:exon:24164;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84795924 | 84795999 | 84795924 | ID=Msa0479700-mRNA-1:exon:24165;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84796329 | 84796415 | 84796329 | ID=Msa0479700-mRNA-1:exon:24166;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84796551 | 84796631 | 84796551 | ID=Msa0479700-mRNA-1:exon:24167;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84796721 | 84796753 | 84796721 | ID=Msa0479700-mRNA-1:exon:24168;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84797084 | 84797125 | 84797084 | ID=Msa0479700-mRNA-1:exon:24169;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84797388 | 84797466 | 84797388 | ID=Msa0479700-mRNA-1:exon:24170;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84797551 | 84797621 | 84797551 | ID=Msa0479700-mRNA-1:exon:24171;Parent=Msa0479700-mRNA-1 |
chr3_3 | exon | 84797709 | 84798142 | 84797709 | ID=Msa0479700-mRNA-1:exon:24172;Parent=Msa0479700-mRNA-1 |
chr3_3 | five_prime_UTR | 84790559 | 84790559 | 84790559 | ID=Msa0479700-mRNA-1:five_prime_utr;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84790560 | 84790671 | 84790560 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84794754 | 84794866 | 84794754 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84795014 | 84795136 | 84795014 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84795226 | 84795431 | 84795226 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84795924 | 84795999 | 84795924 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84796329 | 84796415 | 84796329 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84796551 | 84796631 | 84796551 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84796721 | 84796753 | 84796721 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84797084 | 84797125 | 84797084 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84797388 | 84797466 | 84797388 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84797551 | 84797621 | 84797551 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | CDS | 84797709 | 84797765 | 84797709 | ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1 |
chr3_3 | three_prime_UTR | 84797766 | 84798142 | 84797766 | ID=Msa0479700-mRNA-1:three_prime_utr;Parent=Msa0479700-mRNA-1 |
Gene Sequence |
Protein sequence |