AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0479700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479700 MtrunA17_Chr3g0143461 94.695 377 2 1 1 359 1 377 0.0 712
Msa0479700 MtrunA17_Chr1g0211401 50.265 378 161 4 1 358 56 426 6.76e-130 379
Msa0479700 MtrunA17_Chr1g0198451 33.423 371 212 3 3 352 64 420 3.55e-65 213
Msa0479700 MtrunA17_Chr1g0198441 33.152 368 217 3 3 352 64 420 2.30e-64 211
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479700 AT5G42210.1 54.155 373 152 2 3 357 61 432 5.58e-141 407
Msa0479700 AT5G42210.2 53.453 333 136 2 3 317 61 392 9.44e-122 357
Msa0479700 AT2G16980.2 41.814 397 180 3 2 357 60 446 1.31e-106 320
Msa0479700 AT2G16980.3 41.814 397 180 3 2 357 75 461 1.99e-106 320
Msa0479700 AT2G16990.7 45.553 371 170 4 2 342 59 427 2.03e-106 319
Msa0479700 AT2G16990.1 45.195 385 179 4 2 356 59 441 1.32e-105 318
Msa0479700 AT2G16990.2 45.195 385 179 4 2 356 59 441 1.32e-105 318
Msa0479700 AT2G16970.2 42.377 387 190 3 2 356 60 445 1.65e-104 315
Msa0479700 AT2G16980.4 41.562 397 180 4 2 357 75 460 1.84e-101 308
Msa0479700 AT2G16990.4 44.253 348 162 4 2 319 59 404 5.76e-94 286
Msa0479700 AT2G16990.6 44.253 348 162 4 2 319 59 404 5.76e-94 286
Msa0479700 AT2G16990.8 41.818 385 165 5 2 356 59 414 4.42e-89 275
Msa0479700 AT2G16980.1 39.665 358 165 3 2 318 75 422 1.35e-87 270
Msa0479700 AT2G16970.4 40.401 349 175 3 2 318 60 407 1.49e-86 267
Msa0479700 AT2G16970.7 40.401 349 175 3 2 318 60 407 1.49e-86 267
Msa0479700 AT2G16970.3 39.178 365 189 3 2 334 60 423 4.59e-86 267
Msa0479700 AT2G16980.5 37.565 386 162 5 2 318 75 450 1.83e-83 261
Msa0479700 AT2G16990.3 45.329 289 144 3 2 278 59 345 9.80e-80 249
Msa0479700 AT2G16990.5 45.329 289 144 3 2 278 59 345 9.80e-80 249
Msa0479700 AT2G16970.1 38.344 326 173 3 2 300 60 384 4.96e-75 237
Msa0479700 AT2G16970.6 39.506 324 163 3 2 293 60 382 5.85e-75 237
Msa0479700 AT2G16980.6 39.053 338 154 4 61 357 1 327 1.60e-74 234
Msa0479700 AT2G16970.8 41.237 291 156 2 2 278 60 349 3.76e-74 234
Msa0479700 AT2G16970.5 45.732 164 71 1 211 356 175 338 9.97e-44 154
Msa0479700 AT2G16970.5 55.652 115 51 0 2 116 60 174 2.22e-35 132

Find 84 sgRNAs with CRISPR-Local

Find 527 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGACTTAATGATCATTTC+TGG 0.173185 3_3:+84796371 Msa0479700:CDS
TTGTGTGCAGTATTACTTAA+AGG 0.198024 3_3:+84796319 Msa0479700:intron
CTTGCAGATGTTGGCCTTCA+TGG 0.200217 3_3:+84795967 Msa0479700:CDS
ACTTTCCACTCACCCGTTAA+TGG 0.208512 3_3:-84797457 None:intergenic
GCTTGTGATGATGCCCATTT+TGG 0.228414 3_3:+84790577 Msa0479700:CDS
ATCAGAGAGATCACCCAAAA+TGG 0.242550 3_3:-84790591 None:intergenic
GCACTGCTTCTTCGACCTTC+TGG 0.250970 3_3:-84795026 None:intergenic
GGTGATCTCTCTGATAAGTA+TGG 0.311306 3_3:+84790599 Msa0479700:CDS
GGCTTTCCTTGTGAAATGAT+TGG 0.315353 3_3:-84795313 None:intergenic
CTGAAGCCAGGAAAATTAAA+AGG 0.317779 3_3:-84797574 None:intergenic
ATGATCATTTCTGGTATTGC+AGG 0.320953 3_3:+84796380 Msa0479700:CDS
GCTTTCCTTGTGAAATGATT+GGG 0.321252 3_3:-84795312 None:intergenic
GGGATAATCATGAGGGTCAT+AGG 0.323838 3_3:-84790644 None:intergenic
CTTGGCTTTCTCTCCATTAA+CGG 0.331892 3_3:+84797444 Msa0479700:CDS
AGTGCATTTGGAGTTCTTTC+AGG 0.349547 3_3:+84795044 Msa0479700:CDS
GGTCGAAGAAGCAGTGCATT+TGG 0.349597 3_3:+84795032 Msa0479700:CDS
TATGTCCATCTAACTCAAAA+TGG 0.361400 3_3:-84797752 None:intergenic
AGGGCTCAAGGTTGCATCTC+AGG 0.406266 3_3:+84797391 Msa0479700:CDS
TTGGCTTTCTCTCCATTAAC+GGG 0.411542 3_3:+84797445 Msa0479700:CDS
ACAGCATAGCATGGTCCTCT+TGG 0.414980 3_3:+84796731 Msa0479700:CDS
AAAGGAGGTTATATCTCTTA+AGG 0.419562 3_3:-84795398 None:intergenic
TTCAGCAACCTTGCAGATGT+TGG 0.424383 3_3:+84795958 Msa0479700:CDS
GACCCTCATGATTATCCCCT+TGG 0.424391 3_3:+84790649 Msa0479700:CDS
GGCTTCAGTATAATGTGTAT+TGG 0.431166 3_3:+84797589 Msa0479700:CDS
TGCACATATTGTATCTCCCT+TGG 0.435532 3_3:+84797426 Msa0479700:CDS
AGCTCTATTTCTATCTGAAA+AGG 0.445760 3_3:+84797549 Msa0479700:intron
CAGCATAGCATGGTCCTCTT+GGG 0.448466 3_3:+84796732 Msa0479700:CDS
TGGATGATTCGCAGGCATAT+TGG 0.454868 3_3:+84794740 Msa0479700:intron
TTTGGAGTTCTTTCAGGGAT+AGG 0.457164 3_3:+84795050 Msa0479700:CDS
AAATGATTGGGGTATAAAGT+TGG 0.469648 3_3:-84795300 None:intergenic
CTCCTACTTTGGGCGAGGCA+AGG 0.477680 3_3:+84796573 Msa0479700:CDS
TTCTTTCAGGGAAGGGCTCA+AGG 0.479698 3_3:+84797379 Msa0479700:intron
TGCAGTATTACTTAAAGGCT+CGG 0.491711 3_3:+84796324 Msa0479700:intron
GTGCATTTGGAGTTCTTTCA+GGG 0.492657 3_3:+84795045 Msa0479700:CDS
TCGTCAATATTTACTCATAG+TGG 0.496771 3_3:+84797801 Msa0479700:three_prime_UTR
ACAGTTTCTATAGATAAAGA+AGG 0.497344 3_3:-84797827 None:intergenic
ATCATTAACATGATTTGCGA+TGG 0.498843 3_3:+84794813 Msa0479700:CDS
GAGGCAAGGCTTCTTTCGAT+TGG 0.501981 3_3:+84796587 Msa0479700:CDS
TATTGCAGGGACTGTGTCAC+AGG 0.508069 3_3:+84796394 Msa0479700:CDS
ACTAAAATTAAGACAAAGAC+GGG 0.508180 3_3:-84797979 None:intergenic
TAACCTCCTTTCTCAATAGT+AGG 0.508494 3_3:+84795410 Msa0479700:CDS
AATGTGTATTGGAATTGCTT+CGG 0.510199 3_3:+84797600 Msa0479700:CDS
GAGCTCAATGCTTTCAAAAG+TGG 0.510207 3_3:-84795376 None:intergenic
CCTGCTCACGGGGATCAACT+TGG 0.511306 3_3:-84797104 None:intergenic
ACCCTCATGATTATCCCCTT+GGG 0.512456 3_3:+84790650 Msa0479700:CDS
GGATAATCATGAGGGTCATA+GGG 0.513412 3_3:-84790643 None:intergenic
TCAGAGAGATCACCCAAAAT+GGG 0.513615 3_3:-84790590 None:intergenic
GGTCATAGGGAGCGTAAGAA+TGG 0.513622 3_3:-84790630 None:intergenic
CTTTCCTTGTGAAATGATTG+GGG 0.515488 3_3:-84795311 None:intergenic
TAAACAAACAAAATGTCTAC+TGG 0.523583 3_3:-84797946 None:intergenic
CCAAGTTGATCCCCGTGAGC+AGG 0.523904 3_3:+84797104 Msa0479700:CDS
CTCTGATAAGTATGGGAGGA+AGG 0.534368 3_3:+84790607 Msa0479700:CDS
TTAACATGATACCTGCTCAC+GGG 0.541820 3_3:-84797115 None:intergenic
GTCACACCTACTATTGAGAA+AGG 0.547596 3_3:-84795416 None:intergenic
TGATCATTTCTGGTATTGCA+GGG 0.548846 3_3:+84796381 Msa0479700:CDS
ACCAGAAATGATCATTAAGT+CGG 0.565383 3_3:-84796372 None:intergenic
AACTAAAATTAAGACAAAGA+CGG 0.573749 3_3:-84797980 None:intergenic
TCCATCTAACTCAAAATGGA+AGG 0.576928 3_3:-84797748 None:intergenic
TGGCCTTCATGGTTCAATGA+TGG 0.579807 3_3:+84795978 Msa0479700:CDS
GTGATCTCTCTGATAAGTAT+GGG 0.589147 3_3:+84790600 Msa0479700:CDS
ATACCATCATTGAACCATGA+AGG 0.590082 3_3:-84795981 None:intergenic
AGCCTTGCCTCGCCCAAAGT+AGG 0.594097 3_3:-84796575 None:intergenic
TCAGAGTATGATGCTTAGAG+TGG 0.595054 3_3:+84797723 Msa0479700:CDS
ATACACATTATACTGAAGCC+AGG 0.605025 3_3:-84797586 None:intergenic
ATCTCTCTGATAAGTATGGG+AGG 0.608663 3_3:+84790603 Msa0479700:CDS
ATTAACATGATACCTGCTCA+CGG 0.609111 3_3:-84797116 None:intergenic
TGTTCATTTACAGCATAGCA+TGG 0.610699 3_3:+84796722 Msa0479700:CDS
TACCCAAGGGGATAATCATG+AGG 0.613909 3_3:-84790652 None:intergenic
TATACCCCAATCATTTCACA+AGG 0.622314 3_3:+84795307 Msa0479700:CDS
CATCGGCGACTGAATCCCGA+AGG 0.645898 3_3:-84795273 None:intergenic
TAACATGATACCTGCTCACG+GGG 0.648157 3_3:-84797114 None:intergenic
CGTTAATGGAGAGAAAGCCA+AGG 0.651353 3_3:-84797443 None:intergenic
ACCCAAGGGGATAATCATGA+GGG 0.653332 3_3:-84790651 None:intergenic
TAGGCAGATAACGTTCCAGA+AGG 0.656602 3_3:+84795011 Msa0479700:intron
CATGAAGGCCAACATCTGCA+AGG 0.659193 3_3:-84795966 None:intergenic
ACGTAAGCTAGAGCGAGGCA+AGG 0.659385 3_3:-84794843 None:intergenic
AGATGTGTAGTACATGTATG+TGG 0.668672 3_3:+84798120 Msa0479700:three_prime_UTR
CACCTGAAAAGTTTGAGCAG+CGG 0.670212 3_3:-84795117 None:intergenic
GTTAATGGAGAGAAAGCCAA+GGG 0.684337 3_3:-84797442 None:intergenic
ACACCTACTATTGAGAAAGG+AGG 0.685291 3_3:-84795413 None:intergenic
CAGCAAAAGACATACCCAAG+AGG 0.697205 3_3:-84796746 None:intergenic
TAACAACGTAAGCTAGAGCG+AGG 0.704711 3_3:-84794848 None:intergenic
TGTTGCACACACAAACGCTG+AGG 0.726307 3_3:-84795075 None:intergenic
AGTAGAAAGAAGTACCCAAG+GGG 0.729323 3_3:-84790664 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTAAATATATTAAAA+TGG + chr3_3:84791431-84791450 Msa0479700:intron 0.0%
!!! TATTTTTTTTTTTTTTTTTA+GGG - chr3_3:84798026-84798045 None:intergenic 0.0%
!!! TCTTTTATAATTTTTTTTGT+AGG - chr3_3:84790744-84790763 None:intergenic 10.0%
!!! TAAAAGAAAAAGTATTATTT+TGG + chr3_3:84790757-84790776 Msa0479700:intron 10.0%
!! TTCAAAAAAAAAAAAAACTA+TGG + chr3_3:84790875-84790894 Msa0479700:intron 10.0%
!! ATATTTGATATATTGTTTAT+TGG - chr3_3:84791210-84791229 None:intergenic 10.0%
!!! TCTTTTTAAAAATTTTTTGT+GGG - chr3_3:84793190-84793209 None:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr3_3:84796208-84796227 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr3_3:84796209-84796228 None:intergenic 10.0%
!! TTATGTTGTATTAATTATTA+AGG + chr3_3:84796883-84796902 Msa0479700:intron 10.0%
!!! ATTATATTTTGAATAACAAA+GGG - chr3_3:84797033-84797052 None:intergenic 10.0%
!!! AATTATATTTTGAATAACAA+AGG - chr3_3:84797034-84797053 None:intergenic 10.0%
!!! AATATTTTTGTTAGAAAAAT+AGG + chr3_3:84797155-84797174 Msa0479700:intron 10.0%
!!! ATACATAAAATATATTGATT+AGG + chr3_3:84797186-84797205 Msa0479700:intron 10.0%
!!! AATGCTATTTATTTTATTTT+TGG + chr3_3:84797309-84797328 Msa0479700:intron 10.0%
!!! ATAACTGTTTTTAAATTATT+AGG - chr3_3:84798099-84798118 None:intergenic 10.0%
!! TAATATAAAACACAAATCTA+TGG + chr3_3:84790842-84790861 Msa0479700:intron 15.0%
!!! AATTATCTAAAATTGATTGT+AGG - chr3_3:84791331-84791350 None:intergenic 15.0%
!!! CAATAGATTTTTTTTTTGAA+AGG + chr3_3:84791401-84791420 Msa0479700:intron 15.0%
!!! CTTTTTAAAAATTTTTTGTG+GGG - chr3_3:84793189-84793208 None:intergenic 15.0%
!!! CTCTTTTTAAAAATTTTTTG+TGG - chr3_3:84793191-84793210 None:intergenic 15.0%
!!! AAATGACAAAATAAAAGTTT+TGG - chr3_3:84794556-84794575 None:intergenic 15.0%
!! TTGCTTTATAAATATAATGT+AGG + chr3_3:84794992-84795011 Msa0479700:intron 15.0%
!! CACTATTAAATTTATTATCT+AGG + chr3_3:84795453-84795472 Msa0479700:intron 15.0%
!!! TTTTAAAAATGTGGAATTTA+AGG + chr3_3:84795566-84795585 Msa0479700:intron 15.0%
!! AATTAGAGTTATATTGTATT+GGG - chr3_3:84796143-84796162 None:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG - chr3_3:84796144-84796163 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr3_3:84796207-84796226 None:intergenic 15.0%
!!! GTAGTAAATTATTTTATAAG+TGG + chr3_3:84796809-84796828 Msa0479700:intron 15.0%
!!! TTATATTTTGAATAACAAAG+GGG - chr3_3:84797032-84797051 None:intergenic 15.0%
!! ATGCTTATAATATATTAAGT+TGG + chr3_3:84797336-84797355 Msa0479700:intron 15.0%
!!! TTGAATTTGACATTGTTTTA+TGG + chr3_3:84790710-84790729 Msa0479700:intron 20.0%
!! TTCACTCAATAATAAAAAGT+TGG - chr3_3:84790940-84790959 None:intergenic 20.0%
!! TCAAATATAATTATCTCTAG+TGG + chr3_3:84791222-84791241 Msa0479700:intron 20.0%
!! CATTATGTATATGTATTTCT+GGG - chr3_3:84791570-84791589 None:intergenic 20.0%
!! TCATTATGTATATGTATTTC+TGG - chr3_3:84791571-84791590 None:intergenic 20.0%
!! GAAATACATATACATAATGA+AGG + chr3_3:84791571-84791590 Msa0479700:intron 20.0%
!! TTAAATACAACTTTAATCAC+TGG - chr3_3:84792055-84792074 None:intergenic 20.0%
!! AAAATCTTCAAAGACAAAAA+TGG - chr3_3:84792149-84792168 None:intergenic 20.0%
!! TATTAAATCATTCCAAACAT+CGG + chr3_3:84792511-84792530 Msa0479700:intron 20.0%
!! AAATAATAGAAAAGGTTCAA+GGG - chr3_3:84792655-84792674 None:intergenic 20.0%
!! AGATATTCAAAATATTGAGA+GGG - chr3_3:84792926-84792945 None:intergenic 20.0%
!! AACAAATGGAAGAATAAATA+GGG - chr3_3:84792977-84792996 None:intergenic 20.0%
!! AAACAAATGGAAGAATAAAT+AGG - chr3_3:84792978-84792997 None:intergenic 20.0%
!!! CATTTGTTTGAATTAGTTTA+TGG - chr3_3:84793537-84793556 None:intergenic 20.0%
!! AGTGGTTCAAAAATTAATAT+CGG - chr3_3:84794057-84794076 None:intergenic 20.0%
!!! CAAATTTCTGAAATGTTATT+TGG - chr3_3:84794911-84794930 None:intergenic 20.0%
!!! CATATTGTTCATTTTGAATT+TGG - chr3_3:84794937-84794956 None:intergenic 20.0%
!! GAGAAAACATAATTGATATA+GGG - chr3_3:84795193-84795212 None:intergenic 20.0%
!! AAATTTATTTCATAGCAACA+AGG - chr3_3:84795680-84795699 None:intergenic 20.0%
!! ATATTTGTGTGATTAATAAC+TGG + chr3_3:84795721-84795740 Msa0479700:intron 20.0%
!! AGAAACACATATTTATGAAT+AGG + chr3_3:84795849-84795868 Msa0479700:intron 20.0%
!!! GACACTTTTTTTTAGTAAAT+GGG - chr3_3:84796074-84796093 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - chr3_3:84796110-84796129 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr3_3:84796111-84796130 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr3_3:84796184-84796203 None:intergenic 20.0%
!!! CATAGTTGATAATTGATATT+TGG - chr3_3:84796448-84796467 None:intergenic 20.0%
!! TAATACAACATAAAATGAGA+AGG - chr3_3:84796876-84796895 None:intergenic 20.0%
!! TGATTAGGAAAAAAATTGAA+TGG + chr3_3:84797201-84797220 Msa0479700:intron 20.0%
!! TTCTTTCTTGTCTAATTATA+TGG + chr3_3:84797657-84797676 Msa0479700:intron 20.0%
!! AACTAAAATTAAGACAAAGA+CGG - chr3_3:84797983-84798002 None:intergenic 20.0%
! AGTACATAATTCAAGTGTTT+AGG + chr3_3:84790904-84790923 Msa0479700:intron 25.0%
! AATTCTTAGATCATACTAGT+AGG + chr3_3:84790960-84790979 Msa0479700:intron 25.0%
! GAAAAACTTATTACTAGTCA+AGG + chr3_3:84791084-84791103 Msa0479700:intron 25.0%
! GTGAGAAATGTCTATATAAT+TGG + chr3_3:84791181-84791200 Msa0479700:intron 25.0%
! AATATAATTATCTCTAGTGG+AGG + chr3_3:84791225-84791244 Msa0479700:intron 25.0%
!! TTTTCACAACTACTTTCAAA+TGG + chr3_3:84791349-84791368 Msa0479700:intron 25.0%
! GTTAATGTAGCTAAAATGTA+TGG + chr3_3:84791371-84791390 Msa0479700:intron 25.0%
! ATATATTAAAATGGTACCAG+TGG + chr3_3:84791440-84791459 Msa0479700:intron 25.0%
! AGTATATGTATAGATTGCTT+TGG - chr3_3:84791861-84791880 None:intergenic 25.0%
! TAAAGTTATTGTCATGGAAA+TGG - chr3_3:84792100-84792119 None:intergenic 25.0%
! AAGGAATAAAGTTATTGTCA+TGG - chr3_3:84792106-84792125 None:intergenic 25.0%
! TCTAATTTCCTTCAGTTTAA+GGG - chr3_3:84792260-84792279 None:intergenic 25.0%
! AAAGATAATCTAGTCAAAAG+AGG - chr3_3:84792437-84792456 None:intergenic 25.0%
!! TTGACTAGATTATCTTTTGT+CGG + chr3_3:84792440-84792459 Msa0479700:intron 25.0%
!! ACCAAAACTGAAACTTTTAA+AGG + chr3_3:84792488-84792507 Msa0479700:intron 25.0%
!!! ACCTTTAAAAGTTTCAGTTT+TGG - chr3_3:84792492-84792511 None:intergenic 25.0%
! AATAATAGAAAAGGTTCAAG+GGG - chr3_3:84792654-84792673 None:intergenic 25.0%
! GAAATAATAGAAAAGGTTCA+AGG - chr3_3:84792656-84792675 None:intergenic 25.0%
! ATCTTTGATGAATAGATATC+CGG - chr3_3:84792800-84792819 None:intergenic 25.0%
! GATATTCAAAATATTGAGAG+GGG - chr3_3:84792925-84792944 None:intergenic 25.0%
! GAGATATTCAAAATATTGAG+AGG - chr3_3:84792927-84792946 None:intergenic 25.0%
! AGTAAATATGGTGAAACAAA+TGG - chr3_3:84792991-84793010 None:intergenic 25.0%
! ATTTGTTTCACCATATTTAC+TGG + chr3_3:84792990-84793009 Msa0479700:intron 25.0%
!!! TTTAGCTTTATTGGGTAAAT+GGG - chr3_3:84793064-84793083 None:intergenic 25.0%
!!! ATTTAGCTTTATTGGGTAAA+TGG - chr3_3:84793065-84793084 None:intergenic 25.0%
! AGAATCTAGGAAAATCAATT+GGG - chr3_3:84793157-84793176 None:intergenic 25.0%
! TAGAATCTAGGAAAATCAAT+TGG - chr3_3:84793158-84793177 None:intergenic 25.0%
!!! TTAAAAATTTTTTGTGGGGT+GGG - chr3_3:84793185-84793204 None:intergenic 25.0%
!!! TTTAAAAATTTTTTGTGGGG+TGG - chr3_3:84793186-84793205 None:intergenic 25.0%
!!! CTATTTTTTGTCTTTCTTCA+AGG - chr3_3:84793244-84793263 None:intergenic 25.0%
! AAGAAAGACAAAAAATAGAC+AGG + chr3_3:84793246-84793265 Msa0479700:intron 25.0%
! AATAATAGACACCTTTCTAT+CGG - chr3_3:84793312-84793331 None:intergenic 25.0%
!! TATTTACCTTTCAAGTACTT+AGG - chr3_3:84793417-84793436 None:intergenic 25.0%
!! TTTCACAAAAGTCTTTTAGT+CGG - chr3_3:84793501-84793520 None:intergenic 25.0%
!!! TTTATGTCAGTTTTAGTGAA+TGG - chr3_3:84793807-84793826 None:intergenic 25.0%
! ACTAATAGCTAATGAATTAG+TGG - chr3_3:84793988-84794007 None:intergenic 25.0%
! ATTACTGAATTTCATTCCAA+CGG - chr3_3:84794227-84794246 None:intergenic 25.0%
!!! AGGTAATCAAAGTTGATTTT+CGG - chr3_3:84794256-84794275 None:intergenic 25.0%
! AGAGATAAAAAATGCAGTTT+GGG - chr3_3:84794345-84794364 None:intergenic 25.0%
! AAGAGATAAAAAATGCAGTT+TGG - chr3_3:84794346-84794365 None:intergenic 25.0%
! TTCAAATTTCACAATTGTGT+GGG + chr3_3:84794582-84794601 Msa0479700:intron 25.0%
! AAAAGAAAATGCAGAGAAAT+TGG - chr3_3:84794887-84794906 None:intergenic 25.0%
! ACATAATTGATATAGGGATT+TGG - chr3_3:84795187-84795206 None:intergenic 25.0%
! GGAGAAAACATAATTGATAT+AGG - chr3_3:84795194-84795213 None:intergenic 25.0%
!!! TTCCGTTTATTTTAGCAATT+GGG - chr3_3:84795339-84795358 None:intergenic 25.0%
!!! TTTCCGTTTATTTTAGCAAT+TGG - chr3_3:84795340-84795359 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGTAAA+TGG - chr3_3:84796075-84796094 None:intergenic 25.0%
! TATTGAAAATTGAAATGGGT+CGG - chr3_3:84796106-84796125 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr3_3:84796185-84796204 None:intergenic 25.0%
! ATCTGTGTGAAAAATCAAAT+TGG + chr3_3:84796229-84796248 Msa0479700:intron 25.0%
! TTCCTCATTCTATATATCTT+TGG + chr3_3:84796985-84797004 Msa0479700:intron 25.0%
! AACCAAAGATATATAGAATG+AGG - chr3_3:84796990-84797009 None:intergenic 25.0%
!! AAGGGGAAAGTATATTTAAA+AGG - chr3_3:84797015-84797034 None:intergenic 25.0%
! AGGTATCATGTTAATAGTAT+TGG + chr3_3:84797124-84797143 Msa0479700:intron 25.0%
!!! ATGTTAATAGTATTGGTTAG+TGG + chr3_3:84797131-84797150 Msa0479700:intron 25.0%
!!! GATTAATTTTTGTTTGCAGA+TGG + chr3_3:84797690-84797709 Msa0479700:intron 25.0%
! ACAGTTTCTATAGATAAAGA+AGG - chr3_3:84797830-84797849 None:intergenic 25.0%
! TAAACAAACAAAATGTCTAC+TGG - chr3_3:84797949-84797968 None:intergenic 25.0%
! ACTAAAATTAAGACAAAGAC+GGG - chr3_3:84797982-84798001 None:intergenic 25.0%
CAGTTTGAAAATGAACCAAA+TGG - chr3_3:84790988-84791007 None:intergenic 30.0%
AAACTTATTACTAGTCAAGG+AGG + chr3_3:84791087-84791106 Msa0479700:intron 30.0%
! TTTAGTGCTGTATTCACTTT+TGG - chr3_3:84791471-84791490 None:intergenic 30.0%
CTACAAAAGCAAATACAATG+AGG + chr3_3:84791536-84791555 Msa0479700:intron 30.0%
! TTTAATGTTCATCGTCGATT+TGG - chr3_3:84791916-84791935 None:intergenic 30.0%
AATAAAGATCACTTAGTGTC+GGG - chr3_3:84792006-84792025 None:intergenic 30.0%
GAATAAAGATCACTTAGTGT+CGG - chr3_3:84792007-84792026 None:intergenic 30.0%
! TTAAATCCTATGGACTGTTT+GGG - chr3_3:84792029-84792048 None:intergenic 30.0%
! TTTAAATCCTATGGACTGTT+TGG - chr3_3:84792030-84792049 None:intergenic 30.0%
GTCTAATTTCCTTCAGTTTA+AGG - chr3_3:84792261-84792280 None:intergenic 30.0%
! TGACTAGATTATCTTTTGTC+GGG + chr3_3:84792441-84792460 Msa0479700:intron 30.0%
TGTGGAGATTAATGCAAAAT+AGG - chr3_3:84792469-84792488 None:intergenic 30.0%
!! TAAAAGTTTCAGTTTTGGTG+TGG - chr3_3:84792487-84792506 None:intergenic 30.0%
GGAGTTGGAAATAATAGAAA+AGG - chr3_3:84792663-84792682 None:intergenic 30.0%
AGAAGAAAAAATGTTGGAGT+TGG - chr3_3:84792678-84792697 None:intergenic 30.0%
TCTTTGATGAATAGATATCC+GGG - chr3_3:84792799-84792818 None:intergenic 30.0%
AATCTATCAGAGAACCAATT+TGG + chr3_3:84792883-84792902 Msa0479700:intron 30.0%
AATGGAAGAATAAATAGGGA+GGG - chr3_3:84792973-84792992 None:intergenic 30.0%
AAATGGAAGAATAAATAGGG+AGG - chr3_3:84792974-84792993 None:intergenic 30.0%
AAAGTTCTGTCCAGTAAATA+TGG - chr3_3:84793003-84793022 None:intergenic 30.0%
TTCAGAAAAAGACAGTTTGT+GGG - chr3_3:84793028-84793047 None:intergenic 30.0%
!! GCGTTCAATTTAGCTTTATT+GGG - chr3_3:84793072-84793091 None:intergenic 30.0%
!! AGCGTTCAATTTAGCTTTAT+TGG - chr3_3:84793073-84793092 None:intergenic 30.0%
!!! TAAAAATTTTTTGTGGGGTG+GGG - chr3_3:84793184-84793203 None:intergenic 30.0%
AGTTTAGAGATTATACCTGA+CGG + chr3_3:84793216-84793235 Msa0479700:intron 30.0%
TGAGAAATCGTTTGTTCAAA+TGG - chr3_3:84793335-84793354 None:intergenic 30.0%
! TTCACAAAAGTCTTTTAGTC+GGG - chr3_3:84793500-84793519 None:intergenic 30.0%
AAAGAGCTGGAAAAATGTTT+GGG - chr3_3:84793577-84793596 None:intergenic 30.0%
AAAAGAGCTGGAAAAATGTT+TGG - chr3_3:84793578-84793597 None:intergenic 30.0%
! TCAAAGTATCATCAGCATAT+TGG + chr3_3:84793607-84793626 Msa0479700:intron 30.0%
!! TTATTTGAAGGGTATCAGTT+TGG - chr3_3:84793660-84793679 None:intergenic 30.0%
TGCAATTGGACTTATTTGAA+GGG - chr3_3:84793671-84793690 None:intergenic 30.0%
CAAATGGAGAAATTGGATTT+CGG - chr3_3:84793847-84793866 None:intergenic 30.0%
TTTGTGTCAAATGGAGAAAT+TGG - chr3_3:84793854-84793873 None:intergenic 30.0%
! GAACTATTTAGTCTTTGTGA+TGG - chr3_3:84793889-84793908 None:intergenic 30.0%
ATTCTTGCAAACAGATTGAA+GGG - chr3_3:84794080-84794099 None:intergenic 30.0%
AATTCTTGCAAACAGATTGA+AGG - chr3_3:84794081-84794100 None:intergenic 30.0%
AATACCAAAGATTGAGAATC+CGG - chr3_3:84794165-84794184 None:intergenic 30.0%
CTTTGGTATTAGAGATATGA+AGG + chr3_3:84794175-84794194 Msa0479700:intron 30.0%
! TGGGTTTCTCAAAGAATTTT+GGG - chr3_3:84794279-84794298 None:intergenic 30.0%
! TTGGGTTTCTCAAAGAATTT+TGG - chr3_3:84794280-84794299 None:intergenic 30.0%
CAACATAACTTCATTAACCA+CGG + chr3_3:84794408-84794427 Msa0479700:intron 30.0%
ATTAATCACGTTTAAATCCG+TGG - chr3_3:84794428-84794447 None:intergenic 30.0%
GTTCAAATTTCACAATTGTG+TGG + chr3_3:84794581-84794600 Msa0479700:intron 30.0%
! ATCATTAACATGATTTGCGA+TGG + chr3_3:84794813-84794832 Msa0479700:CDS 30.0%
TAATTGATATAGGGATTTGG+TGG - chr3_3:84795184-84795203 None:intergenic 30.0%
! TGTTTTCTCCTTCAACATTA+AGG + chr3_3:84795204-84795223 Msa0479700:intron 30.0%
AGTTGAAACCTTAATGTTGA+AGG - chr3_3:84795215-84795234 None:intergenic 30.0%
! TAAGGTTTCAACTTTTGTTG+CGG + chr3_3:84795222-84795241 Msa0479700:intron 30.0%
! TGTACATGCAAATTTTCCTT+CGG + chr3_3:84795257-84795276 Msa0479700:CDS 30.0%
!!! GGTATAAAGTTGGTTTTCAT+CGG - chr3_3:84795293-84795312 None:intergenic 30.0%
AAATGATTGGGGTATAAAGT+TGG - chr3_3:84795303-84795322 None:intergenic 30.0%
!!! TCCGTTTATTTTAGCAATTG+GGG - chr3_3:84795338-84795357 None:intergenic 30.0%
AAAGGAGGTTATATCTCTTA+AGG - chr3_3:84795401-84795420 None:intergenic 30.0%
TCTTGCTGCAAATTAGAATA+TGG - chr3_3:84795909-84795928 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr3_3:84796200-84796219 None:intergenic 30.0%
TGTCATCACAAACTAAGTTA+AGG - chr3_3:84796290-84796309 None:intergenic 30.0%
TTGTGTGCAGTATTACTTAA+AGG + chr3_3:84796319-84796338 Msa0479700:intron 30.0%
ACCAGAAATGATCATTAAGT+CGG - chr3_3:84796375-84796394 None:intergenic 30.0%
GTAGATTTGACAAGACAAAA+AGG - chr3_3:84796480-84796499 None:intergenic 30.0%
ATTAAGGTATACGTGTTTAC+AGG + chr3_3:84796899-84796918 Msa0479700:intron 30.0%
! CTTCCTTTTATTGTGTTCTT+AGG - chr3_3:84797229-84797248 None:intergenic 30.0%
CAATAAAAGGAAGACATGAT+TGG + chr3_3:84797236-84797255 Msa0479700:intron 30.0%
TTTCTCACTTATCTTCTTTC+AGG + chr3_3:84797366-84797385 Msa0479700:intron 30.0%
TTCTCACTTATCTTCTTTCA+GGG + chr3_3:84797367-84797386 Msa0479700:intron 30.0%
TAGAGCTGAAAAAAGAGAAT+AGG - chr3_3:84797536-84797555 None:intergenic 30.0%
!! AGCTCTATTTCTATCTGAAA+AGG + chr3_3:84797549-84797568 Msa0479700:intron 30.0%
AATGTGTATTGGAATTGCTT+CGG + chr3_3:84797600-84797619 Msa0479700:CDS 30.0%
TATGTCCATCTAACTCAAAA+TGG - chr3_3:84797755-84797774 None:intergenic 30.0%
TCGTCAATATTTACTCATAG+TGG + chr3_3:84797801-84797820 Msa0479700:three_prime_UTR 30.0%
GTGATCTCTCTGATAAGTAT+GGG + chr3_3:84790600-84790619 Msa0479700:CDS 35.0%
!! AAGTAGAAAGAAGTACCCAA+GGG - chr3_3:84790668-84790687 None:intergenic 35.0%
!! AAAGTAGAAAGAAGTACCCA+AGG - chr3_3:84790669-84790688 None:intergenic 35.0%
TCATACTAGTAGGTTCCATT+TGG + chr3_3:84790970-84790989 Msa0479700:intron 35.0%
GTTTGAGAATCTAGCATTCA+TGG + chr3_3:84791277-84791296 Msa0479700:intron 35.0%
AGTAGTTGTTAGTGGAGTTT+GGG - chr3_3:84791518-84791537 None:intergenic 35.0%
TAGTAGTTGTTAGTGGAGTT+TGG - chr3_3:84791519-84791538 None:intergenic 35.0%
! GCTTTTGTAGTAGTTGTTAG+TGG - chr3_3:84791526-84791545 None:intergenic 35.0%
!!! TGATTGGTCTTTTTAGGAGT+GGG - chr3_3:84791642-84791661 None:intergenic 35.0%
ATCAGCATTCTACCTCTAAT+TGG - chr3_3:84791702-84791721 None:intergenic 35.0%
ATACTGCAGAAATAGCTCAA+AGG + chr3_3:84791762-84791781 Msa0479700:intron 35.0%
TTGTGCTTCTTCATCAATTG+GGG - chr3_3:84791796-84791815 None:intergenic 35.0%
CTTGTGCTTCTTCATCAATT+GGG - chr3_3:84791797-84791816 None:intergenic 35.0%
! AGAGTTTGTTTATGTGCTTC+TGG - chr3_3:84791838-84791857 None:intergenic 35.0%
ATCAATATGTTCCTTAGGCT+GGG - chr3_3:84791889-84791908 None:intergenic 35.0%
TATCAATATGTTCCTTAGGC+TGG - chr3_3:84791890-84791909 None:intergenic 35.0%
GTGCTATCAATATGTTCCTT+AGG - chr3_3:84791894-84791913 None:intergenic 35.0%
TTTATTCCCAAACAGTCCAT+AGG + chr3_3:84792020-84792039 Msa0479700:intron 35.0%
!! TCACTGGTCTTTAAATCCTA+TGG - chr3_3:84792039-84792058 None:intergenic 35.0%
TGCATTTGGATATTGTGGAA+AGG - chr3_3:84792182-84792201 None:intergenic 35.0%
ATGCTTGCATTTGGATATTG+TGG - chr3_3:84792187-84792206 None:intergenic 35.0%
AAGTTATGTTCGTTTGGATG+TGG - chr3_3:84792395-84792414 None:intergenic 35.0%
TCGCAAAAGTTATGTTCGTT+TGG - chr3_3:84792401-84792420 None:intergenic 35.0%
ATCGATCATAGAAGGATATG+TGG - chr3_3:84792558-84792577 None:intergenic 35.0%
GCTTATTCATCGATCATAGA+AGG - chr3_3:84792566-84792585 None:intergenic 35.0%
TAGAAATGGCTATTCGGTAA+AGG - chr3_3:84792591-84792610 None:intergenic 35.0%
AGAAGATGAGGAAGATAAGT+GGG - chr3_3:84792621-84792640 None:intergenic 35.0%
AAGAAGATGAGGAAGATAAG+TGG - chr3_3:84792622-84792641 None:intergenic 35.0%
GACGGAAGAAGAAAAAATGT+TGG - chr3_3:84792684-84792703 None:intergenic 35.0%
TCATTGAAAGAAGTGATGCA+GGG - chr3_3:84792745-84792764 None:intergenic 35.0%
TTCATTGAAAGAAGTGATGC+AGG - chr3_3:84792746-84792765 None:intergenic 35.0%
CTTTGATGAATAGATATCCG+GGG - chr3_3:84792798-84792817 None:intergenic 35.0%
GATAGATTGAGGAGGAATAT+AGG - chr3_3:84792871-84792890 None:intergenic 35.0%
! ATTGGTTCTCTGATAGATTG+AGG - chr3_3:84792882-84792901 None:intergenic 35.0%
TCTGGGGATTTAAACCAAAT+TGG - chr3_3:84792900-84792919 None:intergenic 35.0%
ATGGAAGAATAAATAGGGAG+GGG - chr3_3:84792972-84792991 None:intergenic 35.0%
GTTCAGAAAAAGACAGTTTG+TGG - chr3_3:84793029-84793048 None:intergenic 35.0%
CTTTATTGGGTAAATGGGAA+TGG - chr3_3:84793059-84793078 None:intergenic 35.0%
GTTTGTCGAGTTAAAGAAGA+GGG - chr3_3:84793120-84793139 None:intergenic 35.0%
AGTTTGTCGAGTTAAAGAAG+AGG - chr3_3:84793121-84793140 None:intergenic 35.0%
!!! AAAAATTTTTTGTGGGGTGG+GGG - chr3_3:84793183-84793202 None:intergenic 35.0%
TAGAATTGTCCTCTTGAAGT+CGG - chr3_3:84793286-84793305 None:intergenic 35.0%
TAACATTCATCAATCGTGGA+TGG - chr3_3:84793475-84793494 None:intergenic 35.0%
! TCACAAAAGTCTTTTAGTCG+GGG - chr3_3:84793499-84793518 None:intergenic 35.0%
CAAATGCATGATTGCCTTAA+TGG + chr3_3:84793551-84793570 Msa0479700:intron 35.0%
GAAAAATGTTTGGGCCATTA+AGG - chr3_3:84793568-84793587 None:intergenic 35.0%
GCTGATGATACTTTGATTGT+GGG - chr3_3:84793603-84793622 None:intergenic 35.0%
TGCTGATGATACTTTGATTG+TGG - chr3_3:84793604-84793623 None:intergenic 35.0%
AAGTATCATCAGCATATTGG+AGG + chr3_3:84793610-84793629 Msa0479700:intron 35.0%
GTGCAATTGGACTTATTTGA+AGG - chr3_3:84793672-84793691 None:intergenic 35.0%
GATGTCAAAATCAGTGCAAT+TGG - chr3_3:84793685-84793704 None:intergenic 35.0%
! TATTCTTATTGGTGGCTGAA+GGG - chr3_3:84793719-84793738 None:intergenic 35.0%
! TTATTCTTATTGGTGGCTGA+AGG - chr3_3:84793720-84793739 None:intergenic 35.0%
GCCACCAATAAGAATAAGAA+CGG + chr3_3:84793723-84793742 Msa0479700:intron 35.0%
ATCGCCGTTCTTATTCTTAT+TGG - chr3_3:84793730-84793749 None:intergenic 35.0%
AAGAATAAGAACGGCGATAA+TGG + chr3_3:84793732-84793751 Msa0479700:intron 35.0%
AGAATAAGAACGGCGATAAT+GGG + chr3_3:84793733-84793752 Msa0479700:intron 35.0%
! CTGACATAAAAGTTGATCGA+AGG + chr3_3:84793817-84793836 Msa0479700:intron 35.0%
! AGATGGGATTTTGTGTCAAA+TGG - chr3_3:84793863-84793882 None:intergenic 35.0%
TTAGTATGCTATCCACCAAT+TGG + chr3_3:84794003-84794022 Msa0479700:intron 35.0%
TTTAATCGGGTGTATGTACA+AGG - chr3_3:84794114-84794133 None:intergenic 35.0%
ATACACCCGATTAAAGAGAT+TGG + chr3_3:84794119-84794138 Msa0479700:intron 35.0%
TTTCGGCCAATCTCTTTAAT+CGG - chr3_3:84794128-84794147 None:intergenic 35.0%
! GTTTCTCAAAGAATTTTGGG+AGG - chr3_3:84794276-84794295 None:intergenic 35.0%
AACCCAAAATTAATGCCATC+CGG + chr3_3:84794293-84794312 Msa0479700:intron 35.0%
TTGGAGAAGAAGATAATGTG+AGG - chr3_3:84794391-84794410 None:intergenic 35.0%
CGTGGTTAATGAAGTTATGT+TGG - chr3_3:84794410-84794429 None:intergenic 35.0%
AAATTTCACAATTGTGTGGG+TGG + chr3_3:84794585-84794604 Msa0479700:intron 35.0%
AATTTCACAATTGTGTGGGT+GGG + chr3_3:84794586-84794605 Msa0479700:intron 35.0%
TACTGCGCAACATATACAAA+AGG - chr3_3:84794646-84794665 None:intergenic 35.0%
TATGTTGCGCAGTAATCAAA+TGG + chr3_3:84794652-84794671 Msa0479700:intron 35.0%
TGTTTGTAATGTACTGCTTC+TGG + chr3_3:84794720-84794739 Msa0479700:intron 35.0%
AGAGGAAGTAGCATTAAAAG+AGG - chr3_3:84795151-84795170 None:intergenic 35.0%
! GTACATGCAAATTTTCCTTC+GGG + chr3_3:84795258-84795277 Msa0479700:CDS 35.0%
TATACCCCAATCATTTCACA+AGG + chr3_3:84795307-84795326 Msa0479700:CDS 35.0%
CTTTCCTTGTGAAATGATTG+GGG - chr3_3:84795314-84795333 None:intergenic 35.0%
GCTTTCCTTGTGAAATGATT+GGG - chr3_3:84795315-84795334 None:intergenic 35.0%
!!! CCGTTTATTTTAGCAATTGG+GGG - chr3_3:84795337-84795356 None:intergenic 35.0%
CCCCCAATTGCTAAAATAAA+CGG + chr3_3:84795334-84795353 Msa0479700:CDS 35.0%
TAACCTCCTTTCTCAATAGT+AGG + chr3_3:84795410-84795429 Msa0479700:CDS 35.0%
!!! GCTTGTTTTGCACTGTAAAT+TGG + chr3_3:84795489-84795508 Msa0479700:intron 35.0%
TGTGGAATTTAAGGATAACC+TGG + chr3_3:84795575-84795594 Msa0479700:intron 35.0%
TTTCATAGCAACAAGGTAGA+TGG - chr3_3:84795673-84795692 None:intergenic 35.0%
ACGTGTGATATGCTTTGATA+TGG + chr3_3:84795754-84795773 Msa0479700:intron 35.0%
GCTGCAAATTAGAATATGGA+TGG - chr3_3:84795905-84795924 None:intergenic 35.0%
ATACCATCATTGAACCATGA+AGG - chr3_3:84795984-84796003 None:intergenic 35.0%
AGTAAATGGGTCAGATATTC+CGG - chr3_3:84796061-84796080 None:intergenic 35.0%
!! TGAAATGGGTCGGTTATTTT+GGG - chr3_3:84796096-84796115 None:intergenic 35.0%
! TTGAAATGGGTCGGTTATTT+TGG - chr3_3:84796097-84796116 None:intergenic 35.0%
TCAAATTGGACCAGATATTC+TGG + chr3_3:84796243-84796262 Msa0479700:intron 35.0%
TGCAGTATTACTTAAAGGCT+CGG + chr3_3:84796324-84796343 Msa0479700:intron 35.0%
!! ATGATCATTTCTGGTATTGC+AGG + chr3_3:84796380-84796399 Msa0479700:CDS 35.0%
!! TGATCATTTCTGGTATTGCA+GGG + chr3_3:84796381-84796400 Msa0479700:CDS 35.0%
!!! CCTATTTTTGCTCCTACTTT+GGG + chr3_3:84796563-84796582 Msa0479700:CDS 35.0%
TGTTCATTTACAGCATAGCA+TGG + chr3_3:84796722-84796741 Msa0479700:CDS 35.0%
TGAGGAATAAAACTCACACA+CGG - chr3_3:84796972-84796991 None:intergenic 35.0%
ATTAACATGATACCTGCTCA+CGG - chr3_3:84797119-84797138 None:intergenic 35.0%
GCACCTAAGAACACAATAAA+AGG + chr3_3:84797223-84797242 Msa0479700:intron 35.0%
ACTTATCTTCTTTCAGGGAA+GGG + chr3_3:84797372-84797391 Msa0479700:intron 35.0%
GCAATATGAACATGCATGAT+GGG - chr3_3:84797491-84797510 None:intergenic 35.0%
AGCAATATGAACATGCATGA+TGG - chr3_3:84797492-84797511 None:intergenic 35.0%
!!! AAGGCACCTTTTAATTTTCC+TGG + chr3_3:84797568-84797587 Msa0479700:CDS 35.0%
CTGAAGCCAGGAAAATTAAA+AGG - chr3_3:84797577-84797596 None:intergenic 35.0%
ATACACATTATACTGAAGCC+AGG - chr3_3:84797589-84797608 None:intergenic 35.0%
GGCTTCAGTATAATGTGTAT+TGG + chr3_3:84797589-84797608 Msa0479700:CDS 35.0%
!!! TCCTTCCATTTTGAGTTAGA+TGG + chr3_3:84797747-84797766 Msa0479700:exon 35.0%
TCCATCTAACTCAAAATGGA+AGG - chr3_3:84797751-84797770 None:intergenic 35.0%
! TAGAAACTGTGCTTTTGATG+AGG + chr3_3:84797840-84797859 Msa0479700:three_prime_UTR 35.0%
!! CTTGTGATGATGCCCATTTT+GGG + chr3_3:84790578-84790597 Msa0479700:CDS 40.0%
TCAGAGAGATCACCCAAAAT+GGG - chr3_3:84790593-84790612 None:intergenic 40.0%
ATCAGAGAGATCACCCAAAA+TGG - chr3_3:84790594-84790613 None:intergenic 40.0%
GGTGATCTCTCTGATAAGTA+TGG + chr3_3:84790599-84790618 Msa0479700:CDS 40.0%
ATCTCTCTGATAAGTATGGG+AGG + chr3_3:84790603-84790622 Msa0479700:CDS 40.0%
GGATAATCATGAGGGTCATA+GGG - chr3_3:84790646-84790665 None:intergenic 40.0%
!! AGTAGAAAGAAGTACCCAAG+GGG - chr3_3:84790667-84790686 None:intergenic 40.0%
! TCTCTAGTGGAGGTATACAA+TGG + chr3_3:84791235-84791254 Msa0479700:intron 40.0%
!! AGTGCTGTATTCACTTTTGG+TGG - chr3_3:84791468-84791487 None:intergenic 40.0%
!!! GATTGGTCTTTTTAGGAGTG+GGG - chr3_3:84791641-84791660 None:intergenic 40.0%
!!! CTGATTGGTCTTTTTAGGAG+TGG - chr3_3:84791643-84791662 None:intergenic 40.0%
CAGATGTTTGAGCTCTTGTT+CGG - chr3_3:84791668-84791687 None:intergenic 40.0%
AGCTCAAACATCTGCTAAAC+TGG + chr3_3:84791674-84791693 Msa0479700:intron 40.0%
GCTAAACTGGAACCAATTAG+AGG + chr3_3:84791687-84791706 Msa0479700:intron 40.0%
TTCTGCAGTATCTGACACAA+TGG - chr3_3:84791753-84791772 None:intergenic 40.0%
GCTTGTGCTTCTTCATCAAT+TGG - chr3_3:84791798-84791817 None:intergenic 40.0%
!!! TCTGGTTTTAGCTTTGGCTT+GGG - chr3_3:84791820-84791839 None:intergenic 40.0%
!!! TTCTGGTTTTAGCTTTGGCT+TGG - chr3_3:84791821-84791840 None:intergenic 40.0%
!!! TGTGCTTCTGGTTTTAGCTT+TGG - chr3_3:84791826-84791845 None:intergenic 40.0%
! TAGTGTCGGGAAAGTAGAAT+TGG - chr3_3:84791993-84792012 None:intergenic 40.0%
! TTTAAACCCATGTAGCTTGC+AGG + chr3_3:84792070-84792089 Msa0479700:intron 40.0%
AAAATGGATCGCTGGAAACT+TGG - chr3_3:84792133-84792152 None:intergenic 40.0%
CAAAGACAAAAATGGATCGC+TGG - chr3_3:84792141-84792160 None:intergenic 40.0%
TCATCTGGTATGCTTGCATT+TGG - chr3_3:84792196-84792215 None:intergenic 40.0%
TTTAAGGGTCTGATAGCAAG+TGG - chr3_3:84792245-84792264 None:intergenic 40.0%
CTATCAGACCCTTAAACTGA+AGG + chr3_3:84792249-84792268 Msa0479700:intron 40.0%
! AGCTGTATTTTGTAACGCAC+TGG + chr3_3:84792283-84792302 Msa0479700:intron 40.0%
!! TTTGGCAGCAGGTTCTAAAA+TGG - chr3_3:84792319-84792338 None:intergenic 40.0%
TTCGTTTGGATGTGGAAAAG+AGG - chr3_3:84792387-84792406 None:intergenic 40.0%
CTGGTCTAGAAATGGCTATT+CGG - chr3_3:84792597-84792616 None:intergenic 40.0%
GGTTCGATGTAAAGAAGATG+AGG - chr3_3:84792633-84792652 None:intergenic 40.0%
ATTGAAAGAAGTGATGCAGG+GGG - chr3_3:84792743-84792762 None:intergenic 40.0%
CATTGAAAGAAGTGATGCAG+GGG - chr3_3:84792744-84792763 None:intergenic 40.0%
! CTCTTTTGTGGATAGATCCT+TGG - chr3_3:84792834-84792853 None:intergenic 40.0%
! GTGGTGAAGAAACTCTTTTG+TGG - chr3_3:84792846-84792865 None:intergenic 40.0%
TTGAGGAGGAATATAGGAAG+TGG - chr3_3:84792865-84792884 None:intergenic 40.0%
AAATATTGAGAGGGGAGTCT+GGG - chr3_3:84792917-84792936 None:intergenic 40.0%
AAAATATTGAGAGGGGAGTC+TGG - chr3_3:84792918-84792937 None:intergenic 40.0%
GTTAAAGAAGAGGGATGGTT+GGG - chr3_3:84793111-84793130 None:intergenic 40.0%
AGTTAAAGAAGAGGGATGGT+TGG - chr3_3:84793112-84793131 None:intergenic 40.0%
GGAAAATCAATTGGGTTCAG+TGG - chr3_3:84793149-84793168 None:intergenic 40.0%
!!! AAAATTTTTTGTGGGGTGGG+GGG - chr3_3:84793182-84793201 None:intergenic 40.0%
CAATTCTACCACCGATAGAA+AGG + chr3_3:84793298-84793317 Msa0479700:intron 40.0%
AATAGACACCTTTCTATCGG+TGG - chr3_3:84793309-84793328 None:intergenic 40.0%
AAGTACTTAGGTCTTCCGAT+TGG - chr3_3:84793405-84793424 None:intergenic 40.0%
GGAAGACCTAAGTACTTGAA+AGG + chr3_3:84793408-84793427 Msa0479700:intron 40.0%
! GTGTGTTAAGTTGCAGATTG+GGG - chr3_3:84793440-84793459 None:intergenic 40.0%
! GGTGTGTTAAGTTGCAGATT+GGG - chr3_3:84793441-84793460 None:intergenic 40.0%
! AGGTGTGTTAAGTTGCAGAT+TGG - chr3_3:84793442-84793461 None:intergenic 40.0%
GGGTTAACATTCATCAATCG+TGG - chr3_3:84793479-84793498 None:intergenic 40.0%
TGATTGTGGGTAAAAAGAGC+TGG - chr3_3:84793590-84793609 None:intergenic 40.0%
!! TTTGAAGGGTATCAGTTTGG+TGG - chr3_3:84793657-84793676 None:intergenic 40.0%
GCCGTTCTTATTCTTATTGG+TGG - chr3_3:84793727-84793746 None:intergenic 40.0%
!! CTACCGAAGAATTTGGTGTT+GGG - chr3_3:84793779-84793798 None:intergenic 40.0%
! GTCTTTGTGATGGAGAAGAT+GGG - chr3_3:84793879-84793898 None:intergenic 40.0%
! AGTCTTTGTGATGGAGAAGA+TGG - chr3_3:84793880-84793899 None:intergenic 40.0%
! CTTTGAAAAAGCCTACGACT+CGG - chr3_3:84793919-84793938 None:intergenic 40.0%
! CACTTCCTTTTTCCTTCTCT+TGG + chr3_3:84793956-84793975 Msa0479700:intron 40.0%
ACACAATCTGCTTTCTTGGA+GGG - chr3_3:84794032-84794051 None:intergenic 40.0%
AACACAATCTGCTTTCTTGG+AGG - chr3_3:84794033-84794052 None:intergenic 40.0%
TTCGGCCAATCTCTTTAATC+GGG - chr3_3:84794127-84794146 None:intergenic 40.0%
CGGTGAAATTGAACGAGTTT+CGG - chr3_3:84794145-84794164 None:intergenic 40.0%
CGAAACTCGTTCAATTTCAC+CGG + chr3_3:84794143-84794162 Msa0479700:intron 40.0%
TTCACCGGATTCTCAATCTT+TGG + chr3_3:84794158-84794177 Msa0479700:intron 40.0%
! GTCCGGATGGCATTAATTTT+GGG - chr3_3:84794298-84794317 None:intergenic 40.0%
AATGGCATCGCACACATTAA+TGG + chr3_3:84794670-84794689 Msa0479700:intron 40.0%
! AGTGCATTTGGAGTTCTTTC+AGG + chr3_3:84795044-84795063 Msa0479700:CDS 40.0%
! GTGCATTTGGAGTTCTTTCA+GGG + chr3_3:84795045-84795064 Msa0479700:CDS 40.0%
! TTTGGAGTTCTTTCAGGGAT+AGG + chr3_3:84795050-84795069 Msa0479700:CDS 40.0%
! TTTGGTGGCAACTAAACTAG+AGG - chr3_3:84795169-84795188 None:intergenic 40.0%
GGCTTTCCTTGTGAAATGAT+TGG - chr3_3:84795316-84795335 None:intergenic 40.0%
GAGCTCAATGCTTTCAAAAG+TGG - chr3_3:84795379-84795398 None:intergenic 40.0%
ACACCTACTATTGAGAAAGG+AGG - chr3_3:84795416-84795435 None:intergenic 40.0%
GTCACACCTACTATTGAGAA+AGG - chr3_3:84795419-84795438 None:intergenic 40.0%
GTTAACATGCATGATAGTCC+AGG - chr3_3:84795596-84795615 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG - chr3_3:84796060-84796079 None:intergenic 40.0%
TTGGACCAGATATTCTGGTA+CGG + chr3_3:84796248-84796267 Msa0479700:intron 40.0%
! GCCGACTTAATGATCATTTC+TGG + chr3_3:84796371-84796390 Msa0479700:CDS 40.0%
!!! GCCTATTTTTGCTCCTACTT+TGG + chr3_3:84796562-84796581 Msa0479700:CDS 40.0%
CCCAAAGTAGGAGCAAAAAT+AGG - chr3_3:84796566-84796585 None:intergenic 40.0%
TTAACATGATACCTGCTCAC+GGG - chr3_3:84797118-84797137 None:intergenic 40.0%
GGAACACAGTCAACTTCTAA+TGG + chr3_3:84797257-84797276 Msa0479700:intron 40.0%
CACTTATCTTCTTTCAGGGA+AGG + chr3_3:84797371-84797390 Msa0479700:intron 40.0%
TGCACATATTGTATCTCCCT+TGG + chr3_3:84797426-84797445 Msa0479700:CDS 40.0%
GTTAATGGAGAGAAAGCCAA+GGG - chr3_3:84797445-84797464 None:intergenic 40.0%
! CTTGGCTTTCTCTCCATTAA+CGG + chr3_3:84797444-84797463 Msa0479700:CDS 40.0%
! TTGGCTTTCTCTCCATTAAC+GGG + chr3_3:84797445-84797464 Msa0479700:CDS 40.0%
TCAGAGTATGATGCTTAGAG+TGG + chr3_3:84797723-84797742 Msa0479700:CDS 40.0%
!! GCTTGTGATGATGCCCATTT+TGG + chr3_3:84790577-84790596 Msa0479700:CDS 45.0%
CTCTGATAAGTATGGGAGGA+AGG + chr3_3:84790607-84790626 Msa0479700:CDS 45.0%
GGGATAATCATGAGGGTCAT+AGG - chr3_3:84790647-84790666 None:intergenic 45.0%
ACCCTCATGATTATCCCCTT+GGG + chr3_3:84790650-84790669 Msa0479700:CDS 45.0%
ACCCAAGGGGATAATCATGA+GGG - chr3_3:84790654-84790673 None:intergenic 45.0%
TACCCAAGGGGATAATCATG+AGG - chr3_3:84790655-84790674 None:intergenic 45.0%
!! TTCACTTTTGGTGGTACCAC+TGG - chr3_3:84791459-84791478 None:intergenic 45.0%
GTTAGTGGAGTTTGGGTGAT+TGG - chr3_3:84791511-84791530 None:intergenic 45.0%
!!! CGGCTCTGATTGGTCTTTTT+AGG - chr3_3:84791648-84791667 None:intergenic 45.0%
TGCTTCTTCATCAATTGGGG+TGG - chr3_3:84791793-84791812 None:intergenic 45.0%
TATACTTCAAGCCCAGCCTA+AGG + chr3_3:84791875-84791894 Msa0479700:intron 45.0%
GCTGCAGTGGAATGTTTGTT+TGG - chr3_3:84791942-84791961 None:intergenic 45.0%
!! CTTAGCAGAATTTGCTGCAG+TGG - chr3_3:84791955-84791974 None:intergenic 45.0%
GGTTAACCTGCAAGCTACAT+GGG - chr3_3:84792079-84792098 None:intergenic 45.0%
TGGTTAACCTGCAAGCTACA+TGG - chr3_3:84792080-84792099 None:intergenic 45.0%
CAGATAGGTTCAGTGTCATC+TGG - chr3_3:84792211-84792230 None:intergenic 45.0%
TGATAGCAAGTGGTAGAGTG+AGG - chr3_3:84792235-84792254 None:intergenic 45.0%
TGAATGCAAGTTAGCAGCTG+AGG - chr3_3:84792342-84792361 None:intergenic 45.0%
!! AAGTGGGACTGGTCTAGAAA+TGG - chr3_3:84792605-84792624 None:intergenic 45.0%
ATGAGGAAGATAAGTGGGAC+TGG - chr3_3:84792616-84792635 None:intergenic 45.0%
GTAGACAAGGCTCTGTTAGA+TGG - chr3_3:84792718-84792737 None:intergenic 45.0%
TTGAAAGAAGTGATGCAGGG+GGG - chr3_3:84792742-84792761 None:intergenic 45.0%
AAAGATCCACCTTCTGTCCA+AGG + chr3_3:84792814-84792833 Msa0479700:intron 45.0%
ATAGATCCTTGGACAGAAGG+TGG - chr3_3:84792823-84792842 None:intergenic 45.0%
TGGATAGATCCTTGGACAGA+AGG - chr3_3:84792826-84792845 None:intergenic 45.0%
GGTTCTCTGATAGATTGAGG+AGG - chr3_3:84792879-84792898 None:intergenic 45.0%
AATATTGAGAGGGGAGTCTG+GGG - chr3_3:84792916-84792935 None:intergenic 45.0%
GTCGAGTTAAAGAAGAGGGA+TGG - chr3_3:84793116-84793135 None:intergenic 45.0%
!!! AAATTTTTTGTGGGGTGGGG+GGG - chr3_3:84793181-84793200 None:intergenic 45.0%
! CATACAAGACCGACTTCAAG+AGG + chr3_3:84793274-84793293 Msa0479700:intron 45.0%
TTTCTCACTACATCCACCAC+AGG + chr3_3:84793348-84793367 Msa0479700:intron 45.0%
CTGCCATGATTACCTCCAAT+CGG + chr3_3:84793387-84793406 Msa0479700:intron 45.0%
CTTCCGATTGGAGGTAATCA+TGG - chr3_3:84793393-84793412 None:intergenic 45.0%
TACTTAGGTCTTCCGATTGG+AGG - chr3_3:84793402-84793421 None:intergenic 45.0%
TCATCAATCGTGGATGGATG+AGG - chr3_3:84793469-84793488 None:intergenic 45.0%
!! GAAGAATTTGGTGTTGGGAG+GGG - chr3_3:84793774-84793793 None:intergenic 45.0%
!! CGAAGAATTTGGTGTTGGGA+GGG - chr3_3:84793775-84793794 None:intergenic 45.0%
CCTCCCAACACCAAATTCTT+CGG + chr3_3:84793773-84793792 Msa0479700:intron 45.0%
!! CCTACCGAAGAATTTGGTGT+TGG - chr3_3:84793780-84793799 None:intergenic 45.0%
CCAACACCAAATTCTTCGGT+AGG + chr3_3:84793777-84793796 Msa0479700:intron 45.0%
GGAAGTCCTACCGAAGAATT+TGG - chr3_3:84793786-84793805 None:intergenic 45.0%
TGACGCCAAGAGAAGGAAAA+AGG - chr3_3:84793964-84793983 None:intergenic 45.0%
GGCAACACAATCTGCTTTCT+TGG - chr3_3:84794036-84794055 None:intergenic 45.0%
TGCAAACAGATTGAAGGGAG+TGG - chr3_3:84794075-84794094 None:intergenic 45.0%
! GGTCCGGATGGCATTAATTT+TGG - chr3_3:84794299-84794318 None:intergenic 45.0%
AAATTAATGCCATCCGGACC+AGG + chr3_3:84794299-84794318 Msa0479700:intron 45.0%
ATGTGAACACCTTACGCTAG+TGG + chr3_3:84794478-84794497 Msa0479700:intron 45.0%
TGGATGATTCGCAGGCATAT+TGG + chr3_3:84794740-84794759 Msa0479700:intron 45.0%
TAACAACGTAAGCTAGAGCG+AGG - chr3_3:84794851-84794870 None:intergenic 45.0%
TAGGCAGATAACGTTCCAGA+AGG + chr3_3:84795011-84795030 Msa0479700:intron 45.0%
! ATCCGCTGCTCAAACTTTTC+AGG + chr3_3:84795115-84795134 Msa0479700:CDS 45.0%
CACCTGAAAAGTTTGAGCAG+CGG - chr3_3:84795120-84795139 None:intergenic 45.0%
! TCAACTTTTGTTGCGGTGCT+CGG + chr3_3:84795229-84795248 Msa0479700:CDS 45.0%
CAAGGTAGATGGCACTGTAA+TGG - chr3_3:84795662-84795681 None:intergenic 45.0%
TTCAGCAACCTTGCAGATGT+TGG + chr3_3:84795958-84795977 Msa0479700:CDS 45.0%
TGGCCTTCATGGTTCAATGA+TGG + chr3_3:84795978-84795997 Msa0479700:CDS 45.0%
ACCAGATATTCTGGTACGGA+GGG + chr3_3:84796252-84796271 Msa0479700:intron 45.0%
CAGCAAAAGACATACCCAAG+AGG - chr3_3:84796749-84796768 None:intergenic 45.0%
GAGAACATTGCAGCAGCATA+AGG - chr3_3:84796927-84796946 None:intergenic 45.0%
TAACATGATACCTGCTCACG+GGG - chr3_3:84797117-84797136 None:intergenic 45.0%
CGTTAATGGAGAGAAAGCCA+AGG - chr3_3:84797446-84797465 None:intergenic 45.0%
ACTTTCCACTCACCCGTTAA+TGG - chr3_3:84797460-84797479 None:intergenic 45.0%
!! AATATTAATTTATAATATTG+TGG - chr3_3:84791140-84791159 None:intergenic 5.0%
!! AATATTATAAATTAATATTG+TGG + chr3_3:84791141-84791160 Msa0479700:intron 5.0%
!! AATATATTTAATAATTATCT+TGG - chr3_3:84791427-84791446 None:intergenic 5.0%
!!! TTTTAATAGAAATAAAAATT+TGG - chr3_3:84795618-84795637 None:intergenic 5.0%
!!! GTATTTTTTTTTTTTTTTTT+AGG - chr3_3:84798027-84798046 None:intergenic 5.0%
! GGTCATAGGGAGCGTAAGAA+TGG - chr3_3:84790633-84790652 None:intergenic 50.0%
GACCCTCATGATTATCCCCT+TGG + chr3_3:84790649-84790668 Msa0479700:CDS 50.0%
AAACCACGAGTCCTCAAGCT+TGG + chr3_3:84791615-84791634 Msa0479700:intron 50.0%
! AGCTCTTGTTCGGCTCTGAT+TGG - chr3_3:84791658-84791677 None:intergenic 50.0%
! TCGCTGGAAACTTGGCTTGA+AGG - chr3_3:84792125-84792144 None:intergenic 50.0%
GTGGTAGAGTGAGGACAGAT+AGG - chr3_3:84792226-84792245 None:intergenic 50.0%
GCAAGTTAGCAGCTGAGGTT+TGG - chr3_3:84792337-84792356 None:intergenic 50.0%
TAGATGGAGGAGGGGTTTGA+CGG - chr3_3:84792702-84792721 None:intergenic 50.0%
AGGCTCTGTTAGATGGAGGA+GGG - chr3_3:84792711-84792730 None:intergenic 50.0%
AAGGCTCTGTTAGATGGAGG+AGG - chr3_3:84792712-84792731 None:intergenic 50.0%
GACAAGGCTCTGTTAGATGG+AGG - chr3_3:84792715-84792734 None:intergenic 50.0%
TGAAAGAAGTGATGCAGGGG+GGG - chr3_3:84792741-84792760 None:intergenic 50.0%
ATATCCGGGGCTCTTTGTGT+TGG - chr3_3:84792785-84792804 None:intergenic 50.0%
TAGGGAGGGGAGACATTGTT+CGG - chr3_3:84792959-84792978 None:intergenic 50.0%
TCTTTCTTCAAGGCTCCGTC+AGG - chr3_3:84793234-84793253 None:intergenic 50.0%
GGAGGTAATCATGGCAGAGA+GGG - chr3_3:84793384-84793403 None:intergenic 50.0%
TGGAGGTAATCATGGCAGAG+AGG - chr3_3:84793385-84793404 None:intergenic 50.0%
TCAATCGTGGATGGATGAGG+TGG - chr3_3:84793466-84793485 None:intergenic 50.0%
!! GGGTATCAGTTTGGTGGTGA+CGG - chr3_3:84793651-84793670 None:intergenic 50.0%
!! CCGAAGAATTTGGTGTTGGG+AGG - chr3_3:84793776-84793795 None:intergenic 50.0%
GTTCCAATCTACCGAGTCGT+AGG + chr3_3:84793905-84793924 Msa0479700:intron 50.0%
!! AAGCCTACGACTCGGTAGAT+TGG - chr3_3:84793911-84793930 None:intergenic 50.0%
! TAGTGGATGACGCCAAGAGA+AGG - chr3_3:84793971-84793990 None:intergenic 50.0%
TTTCTTGGAGGGTCGCCAAT+TGG - chr3_3:84794021-84794040 None:intergenic 50.0%
ACCTCGAACTATACGACCGT+TGG + chr3_3:84794208-84794227 Msa0479700:intron 50.0%
TCCAACGGTCGTATAGTTCG+AGG - chr3_3:84794212-84794231 None:intergenic 50.0%
ACTCGTCAACCACTAGCGTA+AGG - chr3_3:84794490-84794509 None:intergenic 50.0%
ACTGCTTCTGGATGATTCGC+AGG + chr3_3:84794732-84794751 Msa0479700:intron 50.0%
GGTCGAAGAAGCAGTGCATT+TGG + chr3_3:84795032-84795051 Msa0479700:CDS 50.0%
TGTTGCACACACAAACGCTG+AGG - chr3_3:84795078-84795097 None:intergenic 50.0%
CATGAAGGCCAACATCTGCA+AGG - chr3_3:84795969-84795988 None:intergenic 50.0%
!! CTTGCAGATGTTGGCCTTCA+TGG + chr3_3:84795967-84795986 Msa0479700:CDS 50.0%
ATGGGTCAGATATTCCGGGA+CGG - chr3_3:84796056-84796075 None:intergenic 50.0%
GACCAGATATTCTGGTACGG+AGG + chr3_3:84796251-84796270 Msa0479700:intron 50.0%
TCCCTCCGTACCAGAATATC+TGG - chr3_3:84796256-84796275 None:intergenic 50.0%
TATTGCAGGGACTGTGTCAC+AGG + chr3_3:84796394-84796413 Msa0479700:CDS 50.0%
! TTTTGCTCCTACTTTGGGCG+AGG + chr3_3:84796568-84796587 Msa0479700:CDS 50.0%
GAGGCAAGGCTTCTTTCGAT+TGG + chr3_3:84796587-84796606 Msa0479700:CDS 50.0%
ACAGCATAGCATGGTCCTCT+TGG + chr3_3:84796731-84796750 Msa0479700:CDS 50.0%
CAGCATAGCATGGTCCTCTT+GGG + chr3_3:84796732-84796751 Msa0479700:CDS 50.0%
TTCTTTCAGGGAAGGGCTCA+AGG + chr3_3:84797379-84797398 Msa0479700:intron 50.0%
! TCTCTCCATTAACGGGTGAG+TGG + chr3_3:84797452-84797471 Msa0479700:intron 50.0%
CAAGCGAGCTTGCCGATGTT+TGG - chr3_3:84792526-84792545 None:intergenic 55.0%
GGCTCTGTTAGATGGAGGAG+GGG - chr3_3:84792710-84792729 None:intergenic 55.0%
GAAAGAAGTGATGCAGGGGG+GGG - chr3_3:84792740-84792759 None:intergenic 55.0%
TCAGCCAACACAAAGAGCCC+CGG + chr3_3:84792778-84792797 Msa0479700:intron 55.0%
GGAGACATTGTTCGGCATGG+TGG - chr3_3:84792951-84792970 None:intergenic 55.0%
AGGGGAGACATTGTTCGGCA+TGG - chr3_3:84792954-84792973 None:intergenic 55.0%
AGAGGGTCTGTGGAAACCTG+TGG - chr3_3:84793367-84793386 None:intergenic 55.0%
ATCATGGCAGAGAGGGTCTG+TGG - chr3_3:84793377-84793396 None:intergenic 55.0%
!! TTGGTGTTGGGAGGGGATTG+AGG - chr3_3:84793767-84793786 None:intergenic 55.0%
TCGAAAAGTCCTGGTCCGGA+TGG - chr3_3:84794311-84794330 None:intergenic 55.0%
GAGCTCGAAAAGTCCTGGTC+CGG - chr3_3:84794315-84794334 None:intergenic 55.0%
TGCGAGAGCTCGAAAAGTCC+TGG - chr3_3:84794320-84794339 None:intergenic 55.0%
ACGTAAGCTAGAGCGAGGCA+AGG - chr3_3:84794846-84794865 None:intergenic 55.0%
GCACTGCTTCTTCGACCTTC+TGG - chr3_3:84795029-84795048 None:intergenic 55.0%
ATCATGTACTCCCTCCGTCC+CGG + chr3_3:84796039-84796058 Msa0479700:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG - chr3_3:84796052-84796071 None:intergenic 55.0%
AGGGCTCAAGGTTGCATCTC+AGG + chr3_3:84797391-84797410 Msa0479700:CDS 55.0%
TAGGAGTGGGGCCAAGCTTG+AGG - chr3_3:84791629-84791648 None:intergenic 60.0%
AGCAGCTGAGGTTTGGCAGC+AGG - chr3_3:84792330-84792349 None:intergenic 60.0%
GGGTCTGTGGAAACCTGTGG+TGG - chr3_3:84793364-84793383 None:intergenic 60.0%
TCGTGGATGGATGAGGTGGC+AGG - chr3_3:84793462-84793481 None:intergenic 60.0%
GTTGGGAGGGGATTGAGGCA+AGG - chr3_3:84793762-84793781 None:intergenic 60.0%
CTTGGAGGGTCGCCAATTGG+TGG - chr3_3:84794018-84794037 None:intergenic 60.0%
CATCGGCGACTGAATCCCGA+AGG - chr3_3:84795276-84795295 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG - chr3_3:84796053-84796072 None:intergenic 60.0%
CTCCTACTTTGGGCGAGGCA+AGG + chr3_3:84796573-84796592 Msa0479700:CDS 60.0%
AGCCTTGCCTCGCCCAAAGT+AGG - chr3_3:84796578-84796597 None:intergenic 60.0%
CCTGCTCACGGGGATCAACT+TGG - chr3_3:84797107-84797126 None:intergenic 60.0%
!! CCAAGTTGATCCCCGTGAGC+AGG + chr3_3:84797104-84797123 Msa0479700:CDS 60.0%
GGGCCAAGCTTGAGGACTCG+TGG - chr3_3:84791621-84791640 None:intergenic 65.0%
GATGCAGGGGGGGGTAGACA+AGG - chr3_3:84792731-84792750 None:intergenic 65.0%
GGGGTGGGGGGGTAGAATCT+AGG - chr3_3:84793170-84793189 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 84790559 84798142 84790559 ID=Msa0479700;Name=Msa0479700
chr3_3 mRNA 84790559 84798142 84790559 ID=Msa0479700-mRNA-1;Parent=Msa0479700;Name=Msa0479700-mRNA-1;_AED=0.16;_eAED=0.16;_QI=1|0.90|1|1|1|1|12|377|359
chr3_3 exon 84790559 84790671 84790559 ID=Msa0479700-mRNA-1:exon:24161;Parent=Msa0479700-mRNA-1
chr3_3 exon 84794754 84794866 84794754 ID=Msa0479700-mRNA-1:exon:24162;Parent=Msa0479700-mRNA-1
chr3_3 exon 84795014 84795136 84795014 ID=Msa0479700-mRNA-1:exon:24163;Parent=Msa0479700-mRNA-1
chr3_3 exon 84795226 84795431 84795226 ID=Msa0479700-mRNA-1:exon:24164;Parent=Msa0479700-mRNA-1
chr3_3 exon 84795924 84795999 84795924 ID=Msa0479700-mRNA-1:exon:24165;Parent=Msa0479700-mRNA-1
chr3_3 exon 84796329 84796415 84796329 ID=Msa0479700-mRNA-1:exon:24166;Parent=Msa0479700-mRNA-1
chr3_3 exon 84796551 84796631 84796551 ID=Msa0479700-mRNA-1:exon:24167;Parent=Msa0479700-mRNA-1
chr3_3 exon 84796721 84796753 84796721 ID=Msa0479700-mRNA-1:exon:24168;Parent=Msa0479700-mRNA-1
chr3_3 exon 84797084 84797125 84797084 ID=Msa0479700-mRNA-1:exon:24169;Parent=Msa0479700-mRNA-1
chr3_3 exon 84797388 84797466 84797388 ID=Msa0479700-mRNA-1:exon:24170;Parent=Msa0479700-mRNA-1
chr3_3 exon 84797551 84797621 84797551 ID=Msa0479700-mRNA-1:exon:24171;Parent=Msa0479700-mRNA-1
chr3_3 exon 84797709 84798142 84797709 ID=Msa0479700-mRNA-1:exon:24172;Parent=Msa0479700-mRNA-1
chr3_3 five_prime_UTR 84790559 84790559 84790559 ID=Msa0479700-mRNA-1:five_prime_utr;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84790560 84790671 84790560 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84794754 84794866 84794754 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84795014 84795136 84795014 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84795226 84795431 84795226 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84795924 84795999 84795924 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84796329 84796415 84796329 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84796551 84796631 84796551 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84796721 84796753 84796721 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84797084 84797125 84797084 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84797388 84797466 84797388 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84797551 84797621 84797551 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 CDS 84797709 84797765 84797709 ID=Msa0479700-mRNA-1:cds;Parent=Msa0479700-mRNA-1
chr3_3 three_prime_UTR 84797766 84798142 84797766 ID=Msa0479700-mRNA-1:three_prime_utr;Parent=Msa0479700-mRNA-1
Gene Sequence

>Msa0479700

ATGATAGGAATGGGAACGCTTGTGATGATGCCCATTTTGGGTGATCTCTCTGATAAGTATGGGAGGAAGGCCATTCTTACGCTCCCTATGACCCTCATGATTATCCCCTTGGGCATATTGGCTTACAGCAGAACGAAAACATTCTTCTATGTGTACTACGTGTTTAAGATCATCATTAACATGATTTGCGATGGATGTGTTCCTTGCCTCGCTCTAGCTTACGTTGCAGATAACGTTCCAGAAGGTCGAAGAAGCAGTGCATTTGGAGTTCTTTCAGGGATAGGATCCTCAGCGTTTGTGTGTGCAACAGTTGCAGCTCGTTTTCTATCCGCTGCTCAAACTTTTCAGGTTTCAACTTTTGTTGCGGTGCTCGGAGCAGTGTACATGCAAATTTTCCTTCGGGATTCAGTCGCCGATGAAAACCAACTTTATACCCCAATCATTTCACAAGGAAAGCCCCCAATTGCTAAAATAAACGGAAAATCAAAAGCTAACATGCCACTTTTGAAAGCATTGAGCTCCTTAAGAGATATAACCTCCTTTCTCAATAGTAGCAAGATTATCACTCAAGCGTCAATTGTTGCGTTCTTCAGCAACCTTGCAGATGTTGGCCTTCATGGTTCAATGATGTATTACTTAAAGGCTCGGTTTCATTTTGATAAGAATCACTTTGCCGACTTAATGATCATTTCTGGTATTGCAGGGACTGTGTCACAGCTTTTTCTTATGCCTATTTTTGCTCCTACTTTGGGCGAGGCAAGGCTTCTTTCGATTGGACTCTTTTTTCACTGTGTACATATGTTCATTTACAGCATAGCATGGTCCTCTTGGATACGAAGTATTGTTTCTAACCAAGTTGATCCCCGTGAGCAGGGAAGGGCTCAAGGTTGCATCTCAGGCATATGTTCGATTGCACATATTGTATCTCCCTTGGCTTTCTCTCCATTAACGGCTCTATTTCTATCTGAAAAGGCACCTTTTAATTTTCCTGGCTTCAGTATAATGTGTATTGGAATTGCTTCGATGGTATCTTTTGTTCAGAGTATGATGCTTAGAGTGGTTCCTTCCATTTTGAGTTAG

Protein sequence

>Msa0479700

MIGMGTLVMMPILGDLSDKYGRKAILTLPMTLMIIPLGILAYSRTKTFFYVYYVFKIIINMICDGCVPCLALAYVADNVPEGRRSSAFGVLSGIGSSAFVCATVAARFLSAAQTFQVSTFVAVLGAVYMQIFLRDSVADENQLYTPIISQGKPPIAKINGKSKANMPLLKALSSLRDITSFLNSSKIITQASIVAFFSNLADVGLHGSMMYYLKARFHFDKNHFADLMIISGIAGTVSQLFLMPIFAPTLGEARLLSIGLFFHCVHMFIYSIAWSSWIRSIVSNQVDPREQGRAQGCISGICSIAHIVSPLAFSPLTALFLSEKAPFNFPGFSIMCIGIASMVSFVQSMMLRVVPSILS*