AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1308130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308130 MtrunA17_Chr8g0334671 91.900 321 14 5 1 319 1 311 0.0 569
Msa1308130 MtrunA17_Chr8g0360361 70.000 90 26 1 193 282 63 151 1.13e-35 127
Msa1308130 MtrunA17_Chr4g0046991 72.619 84 22 1 187 269 64 147 2.37e-35 125
Msa1308130 MtrunA17_Chr1g0194121 48.649 148 63 3 122 269 87 221 4.20e-35 135
Msa1308130 MtrunA17_Chr2g0302791 52.419 124 53 2 155 278 104 221 8.37e-35 134
Msa1308130 MtrunA17_Chr7g0231911 67.857 84 27 0 188 271 142 225 1.31e-34 128
Msa1308130 MtrunA17_Chr3g0122411 54.472 123 49 2 155 270 118 240 6.89e-34 129
Msa1308130 MtrunA17_Chr2g0282521 67.470 83 27 0 187 269 56 138 2.37e-33 120
Msa1308130 MtrunA17_Chr4g0061651 70.370 81 24 0 190 270 118 198 2.76e-33 128
Msa1308130 MtrunA17_Chr2g0308321 72.368 76 21 0 195 270 171 246 3.40e-33 129
Msa1308130 MtrunA17_Chr5g0420051 61.458 96 33 1 175 270 165 256 3.53e-33 127
Msa1308130 MtrunA17_Chr7g0258471 67.857 84 27 0 185 268 132 215 3.88e-33 127
Msa1308130 MtrunA17_Chr7g0270541 55.932 118 44 2 152 269 110 219 4.32e-33 129
Msa1308130 MtrunA17_Chr1g0162871 55.000 120 43 1 151 270 71 179 8.79e-33 129
Msa1308130 MtrunA17_Chr8g0386271 55.752 113 46 1 158 270 66 174 8.87e-32 122
Msa1308130 MtrunA17_Chr3g0132091 68.421 76 24 0 195 270 73 148 2.48e-30 118
Msa1308130 MtrunA17_Chr7g0224821 62.651 83 31 0 190 272 72 154 9.12e-30 117
Msa1308130 MtrunA17_Chr8g0377401 50.442 113 51 2 155 267 127 234 1.05e-27 108
Msa1308130 MtrunA17_Chr8g0377421 45.902 122 53 2 159 268 85 205 1.04e-25 104
Msa1308130 MtrunA17_Chr2g0286661 58.108 74 31 0 195 268 103 176 7.41e-24 102
Msa1308130 MtrunA17_Chr2g0317041 66.102 59 20 0 183 241 87 145 2.44e-21 89.0
Msa1308130 MtrunA17_Chr1g0175031 43.434 99 43 1 156 241 22 120 6.91e-19 81.6
Msa1308130 MtrunA17_Chr8g0377431 57.143 56 24 0 193 248 149 204 1.34e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308130 AT1G02065.1 44.944 356 115 12 1 319 1 312 4.78e-81 250
Msa1308130 AT1G02065.2 44.118 272 85 8 1 242 1 235 1.10e-59 192
Msa1308130 AT1G69170.1 53.543 127 52 3 142 268 78 197 2.26e-34 130
Msa1308130 AT1G27370.6 47.368 152 59 3 135 270 105 251 3.65e-34 128
Msa1308130 AT1G20980.1 57.627 118 49 1 155 272 81 197 3.87e-34 133
Msa1308130 AT1G27370.1 47.368 152 59 3 135 270 105 251 7.16e-34 129
Msa1308130 AT1G27370.5 47.368 152 59 3 135 270 105 251 7.16e-34 129
Msa1308130 AT1G27370.3 47.368 152 59 3 135 270 105 251 7.16e-34 129
Msa1308130 AT1G27370.2 47.368 152 59 3 135 270 105 251 7.16e-34 129
Msa1308130 AT1G27370.4 47.368 152 59 3 135 270 105 251 7.16e-34 129
Msa1308130 AT1G27370.7 47.368 152 59 3 135 270 105 251 7.16e-34 129
Msa1308130 AT1G76580.2 71.250 80 23 0 191 270 110 189 3.45e-33 130
Msa1308130 AT2G47070.1 73.333 75 20 0 195 269 106 180 3.56e-33 130
Msa1308130 AT3G60030.1 54.545 121 44 3 154 274 96 205 3.71e-33 130
Msa1308130 AT1G76580.3 71.250 80 23 0 191 270 110 189 4.28e-33 129
Msa1308130 AT2G33810.1 67.073 82 27 0 188 269 47 128 5.38e-33 119
Msa1308130 AT1G76580.1 71.250 80 23 0 191 270 110 189 6.17e-33 129
Msa1308130 AT5G43270.3 51.471 136 49 3 155 276 118 250 1.39e-32 125
Msa1308130 AT5G43270.1 51.471 136 49 3 155 276 118 250 1.39e-32 125
Msa1308130 AT5G43270.2 51.471 136 49 3 155 276 118 250 1.39e-32 125
Msa1308130 AT1G53160.3 60.606 99 35 2 180 274 35 133 2.97e-32 119
Msa1308130 AT1G53160.2 62.766 94 31 2 185 274 40 133 4.87e-32 118
Msa1308130 AT1G53160.1 62.766 94 31 2 185 274 40 133 4.87e-32 118
Msa1308130 AT3G57920.1 56.140 114 44 2 157 270 27 134 8.70e-32 122
Msa1308130 AT1G27360.2 45.890 146 69 2 135 270 105 250 3.20e-31 121
Msa1308130 AT1G27360.1 45.890 146 69 2 135 270 105 250 3.20e-31 121
Msa1308130 AT1G27360.3 45.890 146 69 2 135 270 105 250 3.20e-31 121
Msa1308130 AT1G27360.4 45.890 146 69 2 135 270 105 250 3.20e-31 121
Msa1308130 AT5G50570.1 60.714 84 33 0 187 270 93 176 5.77e-30 117
Msa1308130 AT5G50570.2 60.714 84 33 0 187 270 93 176 5.77e-30 117
Msa1308130 AT5G50670.1 60.714 84 33 0 187 270 93 176 5.77e-30 117
Msa1308130 AT5G50670.2 60.714 84 33 0 187 270 93 176 5.77e-30 117
Msa1308130 AT2G42200.1 66.667 78 26 0 193 270 72 149 1.20e-29 117
Msa1308130 AT3G15270.1 54.639 97 41 1 173 269 44 137 5.53e-29 110
Msa1308130 AT5G18830.2 46.316 95 51 0 174 268 117 211 2.66e-22 98.2
Msa1308130 AT5G18830.1 46.316 95 51 0 174 268 117 211 3.05e-22 98.2
Msa1308130 AT5G18830.3 46.316 95 51 0 174 268 117 211 3.44e-22 98.2
Msa1308130 AT2G47070.2 72.549 51 14 0 219 269 1 51 1.04e-18 87.8

Find 158 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAACTTTCCTGCAAATT+AGG 0.121535 8_4:-4291382 Msa1308130:intron
TTTCTTTCTGCTATGCTAAA+TGG 0.201745 8_4:+4291562 None:intergenic
CAAATTAAATTAAATTAAAC+TGG 0.232500 8_4:+4289281 None:intergenic
GCTTAAAATGAAATTAATAT+TGG 0.246621 8_4:+4289135 None:intergenic
TTGTGAATATCTTGAGTATT+TGG 0.246735 8_4:+4289689 None:intergenic
CTGTTAACATCCTCGGATTT+TGG 0.256271 8_4:+4290798 None:intergenic
CTTGAAGTTGTTGAAGGGCT+TGG 0.266098 8_4:+4289384 None:intergenic
TTCAAGATGAAATTAATTAA+TGG 0.266576 8_4:-4289231 Msa1308130:three_prime_UTR
GGAGTTGTTGTCTTCATTTC+CGG 0.269715 8_4:+4291169 None:intergenic
CTCTCCCTTGACCCTCTTCC+TGG 0.270502 8_4:-4290858 Msa1308130:CDS
TACCTTAACGGACCTGGTTC+TGG 0.277856 8_4:-4291068 Msa1308130:CDS
CTTCTATCTGAGTTTGATAA+TGG 0.278524 8_4:-4289773 Msa1308130:CDS
GCTGGGCCTGTTGGCTAAAC+TGG 0.285282 8_4:+4290982 None:intergenic
ATCACAACCTGCTGCATTGC+TGG 0.295297 8_4:+4290505 None:intergenic
CCTGTTGGCTAAACTGGTTC+TGG 0.300878 8_4:+4290988 None:intergenic
TCTAGAGCCCACGAAGTCTA+TGG 0.307240 8_4:+4290773 None:intergenic
CCTAATTTGCAGGAAAGTTA+TGG 0.318374 8_4:+4291382 None:intergenic
CCGGTAAGCATGATGTTTGT+TGG 0.322804 8_4:+4291188 None:intergenic
GCAGCCACCGTCGTTGCAGC+TGG 0.327647 8_4:-4290546 Msa1308130:CDS
TTGAAGTTGTTGAAGGGCTT+GGG 0.330690 8_4:+4289385 None:intergenic
CTTAAAATGAAATTAATATT+GGG 0.344072 8_4:+4289136 None:intergenic
TTCCATGGTGGGTCATCAAC+TGG 0.347461 8_4:-4290921 Msa1308130:CDS
CCAACAAACATCATGCTTAC+CGG 0.358315 8_4:-4291188 Msa1308130:CDS
TGTGAATATCTTGAGTATTT+GGG 0.361532 8_4:+4289690 None:intergenic
TGAAATTAATATTGGGAGAA+AGG 0.370310 8_4:+4289143 None:intergenic
TTGTTGAAGGGCTTGGGCTT+TGG 0.370317 8_4:+4289391 None:intergenic
GAAGGATCCCCGCCAGAGTC+TGG 0.374246 8_4:-4289480 Msa1308130:intron
TTCTTTCTGCTATGCTAAAT+GGG 0.380391 8_4:+4291563 None:intergenic
TCGGTCTAGACCACCTGAAC+CGG 0.380874 8_4:-4290682 Msa1308130:CDS
GGAGGTTGTGGTTGAGGTGG+AGG 0.381025 8_4:+4290888 None:intergenic
GAACCTGTCGAACCCGGTTC+AGG 0.386932 8_4:+4290669 None:intergenic
ATGGAAGGAGGTTGTGGTTG+AGG 0.388721 8_4:+4290882 None:intergenic
TTATCCGACAACTACCTTAA+CGG 0.399307 8_4:-4291080 Msa1308130:CDS
AATTTGACGGTGGGCTTGAT+CGG 0.400326 8_4:+4291130 None:intergenic
TTTGCAGGAAAGTTATGGTT+GGG 0.404719 8_4:+4291387 None:intergenic
GGCTAAACTGGTTCTGGTGG+TGG 0.407607 8_4:+4290994 None:intergenic
ATAGCCCTAACCTAATTTGC+AGG 0.408908 8_4:+4291372 None:intergenic
CGGTAAGCATGATGTTTGTT+GGG 0.413507 8_4:+4291189 None:intergenic
TGCAACGACGGTGGCTGCCT+TGG 0.421484 8_4:+4290551 None:intergenic
TTACTACTTGTTAGTAAGAA+AGG 0.422025 8_4:-4289090 Msa1308130:three_prime_UTR
CCTCATCTCTCTCTACCAAT+AGG 0.422136 8_4:+4291648 None:intergenic
CGAAGAAGGACTGATGGATA+TGG 0.430604 8_4:+4290955 None:intergenic
GAGAGCATGGAAGGAGGTTG+TGG 0.432257 8_4:+4290876 None:intergenic
TCACAAATCTCACAATACTT+TGG 0.434049 8_4:-4289672 Msa1308130:CDS
GGTAGAGAGAGATGAGGAGA+AGG 0.435900 8_4:-4291642 Msa1308130:five_prime_UTR
AGAGAGAGTAACTTTCCTAT+TGG 0.436921 8_4:-4291663 Msa1308130:five_prime_UTR
ACTGGTTCTGGTGGTGGTGG+TGG 0.438436 8_4:+4291000 None:intergenic
TAAACTGGTTCTGGTGGTGG+TGG 0.442302 8_4:+4290997 None:intergenic
CAAAATCCGAGGATGTTAAC+AGG 0.446882 8_4:-4290797 Msa1308130:CDS
ACTGATGGATATGGTGCTGC+TGG 0.447816 8_4:+4290964 None:intergenic
ATTGAGCTTGAAGTTGTTGA+AGG 0.454327 8_4:+4289378 None:intergenic
GACAGTGGCGGTTTCTCCAC+CGG 0.454790 8_4:-4289436 Msa1308130:CDS
CTTGACCCTCTTCCTGGTCA+TGG 0.462725 8_4:-4290852 Msa1308130:CDS
GTCCAGAACCAGGTCCGTTA+AGG 0.463925 8_4:+4291066 None:intergenic
GAGACATGTTGGACTATGAA+TGG 0.466941 8_4:-4291217 Msa1308130:exon
CCAGAACCAGTTTAGCCAAC+AGG 0.466999 8_4:-4290988 Msa1308130:CDS
TTAATTTAATTTAATTTGCA+TGG 0.478477 8_4:-4289276 Msa1308130:three_prime_UTR
TATGGTGCTGCTGGGCCTGT+TGG 0.478607 8_4:+4290973 None:intergenic
CATGGACATGGACATGGCCC+TGG 0.481738 8_4:-4290834 Msa1308130:CDS
TTTGGTACGAGGAGGAATCC+AGG 0.482460 8_4:+4290816 None:intergenic
GACTTCGTGGGCTCTAGACT+TGG 0.484947 8_4:-4290768 Msa1308130:CDS
CCACCTGAACCGGGTTCGAC+AGG 0.485330 8_4:-4290672 Msa1308130:CDS
ATCGGAGGCTGCTGCTGCGG+CGG 0.485623 8_4:+4291148 None:intergenic
TTGCAATGCTGATCTATCTC+AGG 0.487614 8_4:-4290616 Msa1308130:CDS
AGACATGTTGGACTATGAAT+GGG 0.488109 8_4:-4291216 Msa1308130:exon
TATCAAACTCAGATAGAAGA+TGG 0.491198 8_4:+4289777 None:intergenic
GGTTCTGCCAGCAATGCAGC+AGG 0.491828 8_4:-4290512 Msa1308130:intron
GGGTCAAGGGAGAGCATGGA+AGG 0.493307 8_4:+4290867 None:intergenic
ATTGAGTTCCAGACTCTGGC+GGG 0.495092 8_4:+4289472 None:intergenic
TAGATCAGCATTGCAACCTT+CGG 0.495851 8_4:+4290623 None:intergenic
CCTCTTCCTGGTCATGGACA+TGG 0.496987 8_4:-4290846 Msa1308130:CDS
ACCCACGGGCTTTCCATGGT+GGG 0.498666 8_4:-4290932 Msa1308130:CDS
TTGCAGGAAAGTTATGGTTG+GGG 0.499017 8_4:+4291388 None:intergenic
GCGGCTCACGAAGTCGTCTT+CGG 0.499397 8_4:+4290713 None:intergenic
ATCAGTCCTTCTTCGACCCA+CGG 0.500041 8_4:-4290947 Msa1308130:CDS
CCTGGTCATGGACATGGACA+TGG 0.500096 8_4:-4290840 Msa1308130:CDS
TTCTTTATAGAGAGACATGT+TGG 0.500470 8_4:-4291228 Msa1308130:exon
CACAAACTTTGTGGCGGCGG+TGG 0.502474 8_4:+4290583 None:intergenic
GAAAACAGTGTGTAATGTAA+TGG 0.504055 8_4:+4291457 None:intergenic
AAGAGGGTCAAGGGAGAGCA+TGG 0.508675 8_4:+4290863 None:intergenic
GAAGGAGGTTGTGGTTGAGG+TGG 0.517345 8_4:+4290885 None:intergenic
TCAGTCCTTCTTCGACCCAC+GGG 0.517839 8_4:-4290946 Msa1308130:CDS
GACCCACGGGCTTTCCATGG+TGG 0.520528 8_4:-4290933 Msa1308130:CDS
GTGGTCTAGACCGACGGTAA+AGG 0.522892 8_4:+4290691 None:intergenic
CCAATGTGTAGCTATTAACT+AGG 0.525271 8_4:-4289319 Msa1308130:three_prime_UTR
AGTGAAACTCACAAACTTTG+TGG 0.531020 8_4:+4290574 None:intergenic
TCTAGACTTGGACTCAACCT+TGG 0.532282 8_4:-4290756 Msa1308130:CDS
ACGTAGCTGCAGGAAGAGAT+TGG 0.533276 8_4:-4289747 Msa1308130:CDS
CAGGTTCTTCGAACTCGCCT+CGG 0.534022 8_4:-4290653 Msa1308130:CDS
TCGATGGTGGGTCCAGAACC+AGG 0.538732 8_4:+4291056 None:intergenic
AGGTCCGTTAAGGTAGTTGT+CGG 0.538800 8_4:+4291076 None:intergenic
ATCACCACTGTTTATGTCGA+TGG 0.538976 8_4:+4291040 None:intergenic
ATCTACATCGTCGGTGACAG+TGG 0.539420 8_4:-4289451 Msa1308130:CDS
GACCTTTGTCGAAAATAATC+CGG 0.539450 8_4:+4289417 None:intergenic
TTGATCGGAGGCTGCTGCTG+CGG 0.542405 8_4:+4291145 None:intergenic
TAACAGGCCCATAGACTTCG+TGG 0.543723 8_4:-4290781 Msa1308130:CDS
ATTTGCAGGAAAGTTATGGT+TGG 0.544119 8_4:+4291386 None:intergenic
TATGGGCCTGTTAACATCCT+CGG 0.547316 8_4:+4290791 None:intergenic
CCATGTCCATGTCCATGACC+AGG 0.547483 8_4:+4290840 None:intergenic
AGTCAACCCAGCTGCAACGA+CGG 0.547853 8_4:+4290539 None:intergenic
CAGCCACCGTCGTTGCAGCT+GGG 0.549496 8_4:-4290545 Msa1308130:CDS
TGCAGGAAAGTTATGGTTGG+GGG 0.549962 8_4:+4291389 None:intergenic
CCATGTCCATGACCAGGAAG+AGG 0.550701 8_4:+4290846 None:intergenic
ATAATGGAAAACGTAGCTGC+AGG 0.553645 8_4:-4289757 Msa1308130:CDS
CTGATGGATATGGTGCTGCT+GGG 0.553703 8_4:+4290965 None:intergenic
TTGAGCTTGAAGTTGTTGAA+GGG 0.561199 8_4:+4289379 None:intergenic
AAGATGAAATTAATTAATGG+AGG 0.566025 8_4:-4289228 Msa1308130:three_prime_UTR
ACTCACAAACTTTGTGGCGG+CGG 0.568304 8_4:+4290580 None:intergenic
GTGGTCGAAAATTTGACGGT+GGG 0.570524 8_4:+4291121 None:intergenic
CGTAGTGGTCGAAAATTTGA+CGG 0.570580 8_4:+4291117 None:intergenic
CATGACCAGGAAGAGGGTCA+AGG 0.572330 8_4:+4290853 None:intergenic
TCGTGAGCCGCCTTTACCGT+CGG 0.573246 8_4:-4290701 Msa1308130:CDS
GTAGATTGAGTTCCAGACTC+TGG 0.579544 8_4:+4289468 None:intergenic
GAGGTTGTGGTTGAGGTGGA+GGG 0.580574 8_4:+4290889 None:intergenic
ATGACCAGGAAGAGGGTCAA+GGG 0.581128 8_4:+4290854 None:intergenic
TTCGAAGAACCTGTCGAACC+CGG 0.581830 8_4:+4290663 None:intergenic
ACCACTGTTTATGTCGATGG+TGG 0.584036 8_4:+4291043 None:intergenic
GTGGGTCGAAGAAGGACTGA+TGG 0.584810 8_4:+4290949 None:intergenic
GACAACTACCTTAACGGACC+TGG 0.585890 8_4:-4291074 Msa1308130:CDS
CCTGTCGAACCCGGTTCAGG+TGG 0.588152 8_4:+4290672 None:intergenic
TGGCTGATCATAATCGTCGC+AGG 0.588393 8_4:-4289727 Msa1308130:CDS
CGGTCTAGACCACCTGAACC+GGG 0.589283 8_4:-4290681 Msa1308130:CDS
AGAAGTATGTGCGGCCACCA+AGG 0.589908 8_4:+4290739 None:intergenic
CCTAGTTAATAGCTACACAT+TGG 0.594646 8_4:+4289319 None:intergenic
CCTATTGGTAGAGAGAGATG+AGG 0.594887 8_4:-4291648 Msa1308130:five_prime_UTR
GTTGGCTAAACTGGTTCTGG+TGG 0.595539 8_4:+4290991 None:intergenic
CCACTGTTTATGTCGATGGT+GGG 0.597970 8_4:+4291044 None:intergenic
AGACTTGGACTCAACCTTGG+TGG 0.599617 8_4:-4290753 Msa1308130:CDS
TTGACGGTGGGCTTGATCGG+AGG 0.603910 8_4:+4291133 None:intergenic
AAATTAAATTAAATTAAACT+GGG 0.605549 8_4:+4289282 None:intergenic
TTGCAGCTGGGTTGACTCAG+CGG 0.610713 8_4:-4290533 Msa1308130:CDS
TCAAGGGAGAGCATGGAAGG+AGG 0.612363 8_4:+4290870 None:intergenic
TTGGTACGAGGAGGAATCCA+GGG 0.615728 8_4:+4290817 None:intergenic
GTCTAGACCGACGGTAAAGG+CGG 0.615862 8_4:+4290694 None:intergenic
TAATTAATGGAGGAGCGTCA+CGG 0.616625 8_4:-4289218 Msa1308130:three_prime_UTR
AGTTTGTGAGTTTCACTCCA+AGG 0.619014 8_4:-4290568 Msa1308130:CDS
TACATCGTCGGTGACAGTGG+CGG 0.620396 8_4:-4289448 Msa1308130:CDS
CATGTCCATGACCAGGAAGA+GGG 0.620462 8_4:+4290847 None:intergenic
GATTGAGTTCCAGACTCTGG+CGG 0.626944 8_4:+4289471 None:intergenic
TGGAACTCAATCTACATCGT+CGG 0.632089 8_4:-4289460 Msa1308130:CDS
AACCAGTTGATGACCCACCA+TGG 0.633020 8_4:+4290919 None:intergenic
CAACCCAGCTGCAACGACGG+TGG 0.640932 8_4:+4290542 None:intergenic
GTTCAGGTGGTCTAGACCGA+CGG 0.647783 8_4:+4290685 None:intergenic
AACAGGCCCATAGACTTCGT+GGG 0.651739 8_4:-4290780 Msa1308130:CDS
GCGTACGTAGGTTCACTACC+CGG 0.662915 8_4:+4289344 None:intergenic
CCTCCTCGTACCAAAATCCG+AGG 0.665794 8_4:-4290808 Msa1308130:CDS
ACCCACCATGGAAAGCCCGT+GGG 0.668555 8_4:+4290931 None:intergenic
AGTGGTCGAAAATTTGACGG+TGG 0.671593 8_4:+4291120 None:intergenic
ACATAGCTTGAGAAGCGTAG+TGG 0.674169 8_4:+4291102 None:intergenic
TACACATTGGTTGCGTACGT+AGG 0.676582 8_4:+4289332 None:intergenic
GACATGTTGGACTATGAATG+GGG 0.677368 8_4:-4291215 Msa1308130:CDS
GAAACTCACAAACTTTGTGG+CGG 0.681714 8_4:+4290577 None:intergenic
CTTTGTCGAAAATAATCCGG+TGG 0.682961 8_4:+4289420 None:intergenic
CAACCTTCGGCCTGACACCG+AGG 0.715496 8_4:+4290636 None:intergenic
TTGAGTTCCAGACTCTGGCG+GGG 0.723001 8_4:+4289473 None:intergenic
CTTCGGAAGAGAAGTATGTG+CGG 0.729099 8_4:+4290730 None:intergenic
CCCACCATCGACATAAACAG+TGG 0.734841 8_4:-4291044 Msa1308130:CDS
TACGTAGGTTCACTACCCGG+TGG 0.763199 8_4:+4289347 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATTAAATTAAATTAAAC+TGG + chr8_4:4291480-4291499 None:intergenic 10.0%
!!! TTAATTTAATTTAATTTGCA+TGG - chr8_4:4291482-4291501 Msa1308130:five_prime_UTR 10.0%
!! CTTAAAATGAAATTAATATT+GGG + chr8_4:4291625-4291644 None:intergenic 10.0%
!!! TAAAAGTCATTCTTTATTTT+TGG + chr8_4:4289431-4289450 None:intergenic 15.0%
!! ACATAAATAAATATATATGC+AGG - chr8_4:4290956-4290975 Msa1308130:CDS 15.0%
!!! ATTTTCTTAATCAATTACTT+TGG - chr8_4:4291127-4291146 Msa1308130:CDS 15.0%
!! ATTCTATTTAACCAAAAATA+AGG - chr8_4:4291202-4291221 Msa1308130:CDS 15.0%
!! TTCTATTTAACCAAAAATAA+GGG - chr8_4:4291203-4291222 Msa1308130:CDS 15.0%
!!! TGATTTGTTTTTTATTTTGA+AGG - chr8_4:4291260-4291279 Msa1308130:intron 15.0%
!! TTCAAGATGAAATTAATTAA+TGG - chr8_4:4291527-4291546 Msa1308130:five_prime_UTR 15.0%
!! GCTTAAAATGAAATTAATAT+TGG + chr8_4:4291626-4291645 None:intergenic 15.0%
!!! TGAGTTAGGTTTTAATTAAA+CGG - chr8_4:4290446-4290465 Msa1308130:intron 20.0%
!! AAAATACACATCTTAATCAA+AGG + chr8_4:4290507-4290526 None:intergenic 20.0%
!!! TTTGATTAAGATGTGTATTT+TGG - chr8_4:4290506-4290525 Msa1308130:intron 20.0%
!!! TTGATTAAGATGTGTATTTT+GGG - chr8_4:4290507-4290526 Msa1308130:intron 20.0%
!! TTGATTAAGAAAATTACTTG+TGG + chr8_4:4291121-4291140 None:intergenic 20.0%
!! AAGATGAAATTAATTAATGG+AGG - chr8_4:4291530-4291549 Msa1308130:five_prime_UTR 20.0%
!!! AAAAGTGTTCAGCTTTTTTA+GGG - chr8_4:4289143-4289162 Msa1308130:three_prime_UTR 25.0%
!!! AAGTCATTCTTTATTTTTGG+AGG + chr8_4:4289428-4289447 None:intergenic 25.0%
! TTCATTTCATTTCATTTCAC+AGG - chr8_4:4289489-4289508 Msa1308130:intron 25.0%
!! TCAATGATTGAGTTGTTAAA+GGG + chr8_4:4290298-4290317 None:intergenic 25.0%
!!! TTTAATTTGCACTTATGGTA+TGG + chr8_4:4290396-4290415 None:intergenic 25.0%
!!! TGTTGTTTAATTTGCACTTA+TGG + chr8_4:4290401-4290420 None:intergenic 25.0%
!! AACTTGTGTTAATTTGAGTT+AGG - chr8_4:4290432-4290451 Msa1308130:intron 25.0%
!!! GTGAGTAGTATATGTTTTAA+GGG + chr8_4:4290708-4290727 None:intergenic 25.0%
!! AGTGAGTAGTATATGTTTTA+AGG + chr8_4:4290709-4290728 None:intergenic 25.0%
! TGTGAATATCTTGAGTATTT+GGG + chr8_4:4291071-4291090 None:intergenic 25.0%
! TTGTGAATATCTTGAGTATT+TGG + chr8_4:4291072-4291091 None:intergenic 25.0%
!!! ATAAGTAACTCCCTTATTTT+TGG + chr8_4:4291216-4291235 None:intergenic 25.0%
! ACTTATCATAAGCATGATTA+TGG - chr8_4:4291230-4291249 Msa1308130:exon 25.0%
! TGAAATTAATATTGGGAGAA+AGG + chr8_4:4291618-4291637 None:intergenic 25.0%
!! TTACTACTTGTTAGTAAGAA+AGG - chr8_4:4291668-4291687 Msa1308130:five_prime_UTR 25.0%
!!! CAAAAGTGTTCAGCTTTTTT+AGG - chr8_4:4289142-4289161 Msa1308130:three_prime_UTR 30.0%
TTCTTTCTGCTATGCTAAAT+GGG + chr8_4:4289198-4289217 None:intergenic 30.0%
TTTCTTTCTGCTATGCTAAA+TGG + chr8_4:4289199-4289218 None:intergenic 30.0%
GAAAACAGTGTGTAATGTAA+TGG + chr8_4:4289304-4289323 None:intergenic 30.0%
TTCTTTATAGAGAGACATGT+TGG - chr8_4:4289530-4289549 Msa1308130:intron 30.0%
! CAATGATTGAGTTGTTAAAG+GGG + chr8_4:4290297-4290316 None:intergenic 30.0%
! CTCAATGATTGAGTTGTTAA+AGG + chr8_4:4290299-4290318 None:intergenic 30.0%
!!! GGTTTTAAAAACGTGTATGA+GGG - chr8_4:4290528-4290547 Msa1308130:CDS 30.0%
AAGGTTGGATTCAAAAAAGA+CGG - chr8_4:4290610-4290629 Msa1308130:CDS 30.0%
!! TACTACTCACTTAGTTTGTT+TGG - chr8_4:4290718-4290737 Msa1308130:CDS 30.0%
TATCAAACTCAGATAGAAGA+TGG + chr8_4:4290984-4291003 None:intergenic 30.0%
CTTCTATCTGAGTTTGATAA+TGG - chr8_4:4290985-4291004 Msa1308130:CDS 30.0%
TCACAAATCTCACAATACTT+TGG - chr8_4:4291086-4291105 Msa1308130:CDS 30.0%
AGAGAGAGTAACTTTCCTAT+TGG - chr8_4:4289095-4289114 Msa1308130:three_prime_UTR 35.0%
TTTGCAGGAAAGTTATGGTT+GGG + chr8_4:4289374-4289393 None:intergenic 35.0%
ATTTGCAGGAAAGTTATGGT+TGG + chr8_4:4289375-4289394 None:intergenic 35.0%
! CCTAATTTGCAGGAAAGTTA+TGG + chr8_4:4289379-4289398 None:intergenic 35.0%
CCATAACTTTCCTGCAAATT+AGG - chr8_4:4289376-4289395 Msa1308130:CDS 35.0%
ACTTTCCTGCAAATTAGGTT+AGG - chr8_4:4289381-4289400 Msa1308130:CDS 35.0%
CTTTCCTGCAAATTAGGTTA+GGG - chr8_4:4289382-4289401 Msa1308130:CDS 35.0%
AGACATGTTGGACTATGAAT+GGG - chr8_4:4289542-4289561 Msa1308130:intron 35.0%
TTATCCGACAACTACCTTAA+CGG - chr8_4:4289678-4289697 Msa1308130:CDS 35.0%
AGTGAAACTCACAAACTTTG+TGG + chr8_4:4290187-4290206 None:intergenic 35.0%
! TATTTCTGTTCCTCACTTCA+AGG - chr8_4:4290330-4290349 Msa1308130:intron 35.0%
ATTTCTGTTCCTCACTTCAA+GGG - chr8_4:4290331-4290350 Msa1308130:intron 35.0%
!!! GGGTTTTAAAAACGTGTATG+AGG - chr8_4:4290527-4290546 Msa1308130:CDS 35.0%
!!! GCTGTGTTGTTTTGTTTGAA+TGG + chr8_4:4290803-4290822 None:intergenic 35.0%
GACCTTTGTCGAAAATAATC+CGG + chr8_4:4291344-4291363 None:intergenic 35.0%
TTGAGCTTGAAGTTGTTGAA+GGG + chr8_4:4291382-4291401 None:intergenic 35.0%
ATTGAGCTTGAAGTTGTTGA+AGG + chr8_4:4291383-4291402 None:intergenic 35.0%
CCTAGTTAATAGCTACACAT+TGG + chr8_4:4291442-4291461 None:intergenic 35.0%
CCAATGTGTAGCTATTAACT+AGG - chr8_4:4291439-4291458 Msa1308130:five_prime_UTR 35.0%
TTGCAGGAAAGTTATGGTTG+GGG + chr8_4:4289373-4289392 None:intergenic 40.0%
! ATAGCCCTAACCTAATTTGC+AGG + chr8_4:4289389-4289408 None:intergenic 40.0%
GAGACATGTTGGACTATGAA+TGG - chr8_4:4289541-4289560 Msa1308130:intron 40.0%
GACATGTTGGACTATGAATG+GGG - chr8_4:4289543-4289562 Msa1308130:intron 40.0%
CGGTAAGCATGATGTTTGTT+GGG + chr8_4:4289572-4289591 None:intergenic 40.0%
CCAACAAACATCATGCTTAC+CGG - chr8_4:4289570-4289589 Msa1308130:intron 40.0%
GGAGTTGTTGTCTTCATTTC+CGG + chr8_4:4289592-4289611 None:intergenic 40.0%
CGTAGTGGTCGAAAATTTGA+CGG + chr8_4:4289644-4289663 None:intergenic 40.0%
ATCACCACTGTTTATGTCGA+TGG + chr8_4:4289721-4289740 None:intergenic 40.0%
! CTGTTAACATCCTCGGATTT+TGG + chr8_4:4289963-4289982 None:intergenic 40.0%
CAAAATCCGAGGATGTTAAC+AGG - chr8_4:4289961-4289980 Msa1308130:intron 40.0%
TAGATCAGCATTGCAACCTT+CGG + chr8_4:4290138-4290157 None:intergenic 40.0%
TTGCAATGCTGATCTATCTC+AGG - chr8_4:4290142-4290161 Msa1308130:intron 40.0%
GAAACTCACAAACTTTGTGG+CGG + chr8_4:4290184-4290203 None:intergenic 40.0%
AGTTTGTGAGTTTCACTCCA+AGG - chr8_4:4290190-4290209 Msa1308130:intron 40.0%
AGTAAGCAAGCACAAAACAG+CGG - chr8_4:4290569-4290588 Msa1308130:CDS 40.0%
AAAAGACGGAAATACCCTTG+AGG - chr8_4:4290624-4290643 Msa1308130:CDS 40.0%
AAAGACGGAAATACCCTTGA+GGG - chr8_4:4290625-4290644 Msa1308130:CDS 40.0%
!! ATGATTGAGTTGACCGTACA+TGG - chr8_4:4290659-4290678 Msa1308130:CDS 40.0%
!! TGATTGAGTTGACCGTACAT+GGG - chr8_4:4290660-4290679 Msa1308130:CDS 40.0%
! ATAATGGAAAACGTAGCTGC+AGG - chr8_4:4291001-4291020 Msa1308130:CDS 40.0%
TGGAACTCAATCTACATCGT+CGG - chr8_4:4291298-4291317 Msa1308130:intron 40.0%
CTTTGTCGAAAATAATCCGG+TGG + chr8_4:4291341-4291360 None:intergenic 40.0%
! CACCGGATTATTTTCGACAA+AGG - chr8_4:4291339-4291358 Msa1308130:intron 40.0%
TTGAAGTTGTTGAAGGGCTT+GGG + chr8_4:4291376-4291395 None:intergenic 40.0%
! AGCTCAATGTTTTTCTCCAC+CGG - chr8_4:4291395-4291414 Msa1308130:five_prime_UTR 40.0%
!! TAATTAATGGAGGAGCGTCA+CGG - chr8_4:4291540-4291559 Msa1308130:five_prime_UTR 40.0%
CCTCATCTCTCTCTACCAAT+AGG + chr8_4:4289113-4289132 None:intergenic 45.0%
CCTATTGGTAGAGAGAGATG+AGG - chr8_4:4289110-4289129 Msa1308130:three_prime_UTR 45.0%
TGCAGGAAAGTTATGGTTGG+GGG + chr8_4:4289372-4289391 None:intergenic 45.0%
CCGGTAAGCATGATGTTTGT+TGG + chr8_4:4289573-4289592 None:intergenic 45.0%
! AATTTGACGGTGGGCTTGAT+CGG + chr8_4:4289631-4289650 None:intergenic 45.0%
GTGGTCGAAAATTTGACGGT+GGG + chr8_4:4289640-4289659 None:intergenic 45.0%
AGTGGTCGAAAATTTGACGG+TGG + chr8_4:4289641-4289660 None:intergenic 45.0%
! ACATAGCTTGAGAAGCGTAG+TGG + chr8_4:4289659-4289678 None:intergenic 45.0%
AGGTCCGTTAAGGTAGTTGT+CGG + chr8_4:4289685-4289704 None:intergenic 45.0%
CCACTGTTTATGTCGATGGT+GGG + chr8_4:4289717-4289736 None:intergenic 45.0%
ACCACTGTTTATGTCGATGG+TGG + chr8_4:4289718-4289737 None:intergenic 45.0%
! CGAAGAAGGACTGATGGATA+TGG + chr8_4:4289806-4289825 None:intergenic 45.0%
TATGGGCCTGTTAACATCCT+CGG + chr8_4:4289970-4289989 None:intergenic 45.0%
TCTAGACTTGGACTCAACCT+TGG - chr8_4:4290002-4290021 Msa1308130:intron 45.0%
! CTTCGGAAGAGAAGTATGTG+CGG + chr8_4:4290031-4290050 None:intergenic 45.0%
ACGAAAATGCCCTTGAAGTG+AGG + chr8_4:4290343-4290362 None:intergenic 45.0%
AAGCACAAAACAGCGGTGTT+GGG - chr8_4:4290576-4290595 Msa1308130:CDS 45.0%
AAGACGGAAATACCCTTGAG+GGG - chr8_4:4290626-4290645 Msa1308130:CDS 45.0%
ATTGTCAACTCTCCCCTCAA+GGG + chr8_4:4290641-4290660 None:intergenic 45.0%
!! GATTGAGTTGACCGTACATG+GGG - chr8_4:4290661-4290680 Msa1308130:CDS 45.0%
TTAAGGGACACAAATGCCCT+CGG + chr8_4:4290692-4290711 None:intergenic 45.0%
GTAGATTGAGTTCCAGACTC+TGG + chr8_4:4291293-4291312 None:intergenic 45.0%
CTTGAAGTTGTTGAAGGGCT+TGG + chr8_4:4291377-4291396 None:intergenic 45.0%
! GCTCAATGTTTTTCTCCACC+GGG - chr8_4:4291396-4291415 Msa1308130:five_prime_UTR 45.0%
! TACACATTGGTTGCGTACGT+AGG + chr8_4:4291429-4291448 None:intergenic 45.0%
!!! TTTTTTTTTTTTTATCAAAA+AGG - chr8_4:4290480-4290499 Msa1308130:intron 5.0%
!! TAATAATAATAATAATATAG+TGG + chr8_4:4290875-4290894 None:intergenic 5.0%
!! AAATTAAATTAAATTAAACT+GGG + chr8_4:4291479-4291498 None:intergenic 5.0%
GGTAGAGAGAGATGAGGAGA+AGG - chr8_4:4289116-4289135 Msa1308130:three_prime_UTR 50.0%
! GACAACTACCTTAACGGACC+TGG - chr8_4:4289684-4289703 Msa1308130:CDS 50.0%
! TACCTTAACGGACCTGGTTC+TGG - chr8_4:4289690-4289709 Msa1308130:CDS 50.0%
CCCACCATCGACATAAACAG+TGG - chr8_4:4289714-4289733 Msa1308130:CDS 50.0%
!! TAAACTGGTTCTGGTGGTGG+TGG + chr8_4:4289764-4289783 None:intergenic 50.0%
!! GTTGGCTAAACTGGTTCTGG+TGG + chr8_4:4289770-4289789 None:intergenic 50.0%
! CCTGTTGGCTAAACTGGTTC+TGG + chr8_4:4289773-4289792 None:intergenic 50.0%
CCAGAACCAGTTTAGCCAAC+AGG - chr8_4:4289770-4289789 Msa1308130:CDS 50.0%
!! CTGATGGATATGGTGCTGCT+GGG + chr8_4:4289796-4289815 None:intergenic 50.0%
!! ACTGATGGATATGGTGCTGC+TGG + chr8_4:4289797-4289816 None:intergenic 50.0%
ATCAGTCCTTCTTCGACCCA+CGG - chr8_4:4289811-4289830 Msa1308130:intron 50.0%
!! TTCCATGGTGGGTCATCAAC+TGG - chr8_4:4289837-4289856 Msa1308130:intron 50.0%
!! AACCAGTTGATGACCCACCA+TGG + chr8_4:4289842-4289861 None:intergenic 50.0%
ATGGAAGGAGGTTGTGGTTG+AGG + chr8_4:4289879-4289898 None:intergenic 50.0%
ATGACCAGGAAGAGGGTCAA+GGG + chr8_4:4289907-4289926 None:intergenic 50.0%
CATGTCCATGACCAGGAAGA+GGG + chr8_4:4289914-4289933 None:intergenic 50.0%
TTGGTACGAGGAGGAATCCA+GGG + chr8_4:4289944-4289963 None:intergenic 50.0%
TTTGGTACGAGGAGGAATCC+AGG + chr8_4:4289945-4289964 None:intergenic 50.0%
!! CATCCTCGGATTTTGGTACG+AGG + chr8_4:4289956-4289975 None:intergenic 50.0%
TAACAGGCCCATAGACTTCG+TGG - chr8_4:4289977-4289996 Msa1308130:intron 50.0%
AACAGGCCCATAGACTTCGT+GGG - chr8_4:4289978-4289997 Msa1308130:intron 50.0%
CTAGAGCCCACGAAGTCTAT+GGG + chr8_4:4289987-4290006 None:intergenic 50.0%
! TCTAGAGCCCACGAAGTCTA+TGG + chr8_4:4289988-4290007 None:intergenic 50.0%
AGACTTGGACTCAACCTTGG+TGG - chr8_4:4290005-4290024 Msa1308130:intron 50.0%
TTCGAAGAACCTGTCGAACC+CGG + chr8_4:4290098-4290117 None:intergenic 50.0%
ACTCACAAACTTTGTGGCGG+CGG + chr8_4:4290181-4290200 None:intergenic 50.0%
ATCACAACCTGCTGCATTGC+TGG + chr8_4:4290256-4290275 None:intergenic 50.0%
CAAGCACAAAACAGCGGTGT+TGG - chr8_4:4290575-4290594 Msa1308130:CDS 50.0%
! AGCACAAAACAGCGGTGTTG+GGG - chr8_4:4290577-4290596 Msa1308130:CDS 50.0%
CATTGTCAACTCTCCCCTCA+AGG + chr8_4:4290642-4290661 None:intergenic 50.0%
TAAGGGACACAAATGCCCTC+GGG + chr8_4:4290691-4290710 None:intergenic 50.0%
ACGTAGCTGCAGGAAGAGAT+TGG - chr8_4:4291011-4291030 Msa1308130:CDS 50.0%
TGGCTGATCATAATCGTCGC+AGG - chr8_4:4291031-4291050 Msa1308130:CDS 50.0%
ATTGAGTTCCAGACTCTGGC+GGG + chr8_4:4291289-4291308 None:intergenic 50.0%
GATTGAGTTCCAGACTCTGG+CGG + chr8_4:4291290-4291309 None:intergenic 50.0%
ATCTACATCGTCGGTGACAG+TGG - chr8_4:4291307-4291326 Msa1308130:intron 50.0%
TTGTTGAAGGGCTTGGGCTT+TGG + chr8_4:4291370-4291389 None:intergenic 50.0%
GTCCAGAACCAGGTCCGTTA+AGG + chr8_4:4289695-4289714 None:intergenic 55.0%
!! GGCTAAACTGGTTCTGGTGG+TGG + chr8_4:4289767-4289786 None:intergenic 55.0%
GTGGGTCGAAGAAGGACTGA+TGG + chr8_4:4289812-4289831 None:intergenic 55.0%
TCAGTCCTTCTTCGACCCAC+GGG - chr8_4:4289812-4289831 Msa1308130:intron 55.0%
GAGGTTGTGGTTGAGGTGGA+GGG + chr8_4:4289872-4289891 None:intergenic 55.0%
GAAGGAGGTTGTGGTTGAGG+TGG + chr8_4:4289876-4289895 None:intergenic 55.0%
! GAGAGCATGGAAGGAGGTTG+TGG + chr8_4:4289885-4289904 None:intergenic 55.0%
! TCAAGGGAGAGCATGGAAGG+AGG + chr8_4:4289891-4289910 None:intergenic 55.0%
AAGAGGGTCAAGGGAGAGCA+TGG + chr8_4:4289898-4289917 None:intergenic 55.0%
CATGACCAGGAAGAGGGTCA+AGG + chr8_4:4289908-4289927 None:intergenic 55.0%
CTTGACCCTCTTCCTGGTCA+TGG - chr8_4:4289906-4289925 Msa1308130:intron 55.0%
CCATGTCCATGACCAGGAAG+AGG + chr8_4:4289915-4289934 None:intergenic 55.0%
CCTCTTCCTGGTCATGGACA+TGG - chr8_4:4289912-4289931 Msa1308130:intron 55.0%
CCATGTCCATGTCCATGACC+AGG + chr8_4:4289921-4289940 None:intergenic 55.0%
CCTGGTCATGGACATGGACA+TGG - chr8_4:4289918-4289937 Msa1308130:intron 55.0%
!! CCTCGGATTTTGGTACGAGG+AGG + chr8_4:4289953-4289972 None:intergenic 55.0%
CCTCCTCGTACCAAAATCCG+AGG - chr8_4:4289950-4289969 Msa1308130:intron 55.0%
!! GACTTCGTGGGCTCTAGACT+TGG - chr8_4:4289990-4290009 Msa1308130:intron 55.0%
! AGAAGTATGTGCGGCCACCA+AGG + chr8_4:4290022-4290041 None:intergenic 55.0%
GTCTAGACCGACGGTAAAGG+CGG + chr8_4:4290067-4290086 None:intergenic 55.0%
GTGGTCTAGACCGACGGTAA+AGG + chr8_4:4290070-4290089 None:intergenic 55.0%
GTTCAGGTGGTCTAGACCGA+CGG + chr8_4:4290076-4290095 None:intergenic 55.0%
TCGGTCTAGACCACCTGAAC+CGG - chr8_4:4290076-4290095 Msa1308130:intron 55.0%
CAGGTTCTTCGAACTCGCCT+CGG - chr8_4:4290105-4290124 Msa1308130:intron 55.0%
AGTCAACCCAGCTGCAACGA+CGG + chr8_4:4290222-4290241 None:intergenic 55.0%
! TTGCAGCTGGGTTGACTCAG+CGG - chr8_4:4290225-4290244 Msa1308130:intron 55.0%
! GCACAAAACAGCGGTGTTGG+GGG - chr8_4:4290578-4290597 Msa1308130:CDS 55.0%
! AAACAGCGGTGTTGGGGGAT+AGG - chr8_4:4290583-4290602 Msa1308130:CDS 55.0%
! AACAGCGGTGTTGGGGGATA+GGG - chr8_4:4290584-4290603 Msa1308130:CDS 55.0%
CCTCGGGATTTCCCCATGTA+CGG + chr8_4:4290675-4290694 None:intergenic 55.0%
CGTACATGGGGAAATCCCGA+GGG - chr8_4:4290673-4290692 Msa1308130:CDS 55.0%
TTGAGTTCCAGACTCTGGCG+GGG + chr8_4:4291288-4291307 None:intergenic 55.0%
TACATCGTCGGTGACAGTGG+CGG - chr8_4:4291310-4291329 Msa1308130:intron 55.0%
TACGTAGGTTCACTACCCGG+TGG + chr8_4:4291414-4291433 None:intergenic 55.0%
GCGTACGTAGGTTCACTACC+CGG + chr8_4:4291417-4291436 None:intergenic 55.0%
TTGATCGGAGGCTGCTGCTG+CGG + chr8_4:4289616-4289635 None:intergenic 60.0%
! TTGACGGTGGGCTTGATCGG+AGG + chr8_4:4289628-4289647 None:intergenic 60.0%
!! TCGATGGTGGGTCCAGAACC+AGG + chr8_4:4289705-4289724 None:intergenic 60.0%
!! ACTGGTTCTGGTGGTGGTGG+TGG + chr8_4:4289761-4289780 None:intergenic 60.0%
! GCTGGGCCTGTTGGCTAAAC+TGG + chr8_4:4289779-4289798 None:intergenic 60.0%
!! TATGGTGCTGCTGGGCCTGT+TGG + chr8_4:4289788-4289807 None:intergenic 60.0%
GAAAGCCCGTGGGTCGAAGA+AGG + chr8_4:4289820-4289839 None:intergenic 60.0%
TTCGACCCACGGGCTTTCCA+TGG - chr8_4:4289822-4289841 Msa1308130:intron 60.0%
ACCCACGGGCTTTCCATGGT+GGG - chr8_4:4289826-4289845 Msa1308130:intron 60.0%
ACCCACCATGGAAAGCCCGT+GGG + chr8_4:4289830-4289849 None:intergenic 60.0%
GGAGGTTGTGGTTGAGGTGG+AGG + chr8_4:4289873-4289892 None:intergenic 60.0%
! GGGTCAAGGGAGAGCATGGA+AGG + chr8_4:4289894-4289913 None:intergenic 60.0%
CTCTCCCTTGACCCTCTTCC+TGG - chr8_4:4289900-4289919 Msa1308130:intron 60.0%
CATGGACATGGACATGGCCC+TGG - chr8_4:4289924-4289943 Msa1308130:intron 60.0%
GCGGCTCACGAAGTCGTCTT+CGG + chr8_4:4290048-4290067 None:intergenic 60.0%
TCGTGAGCCGCCTTTACCGT+CGG - chr8_4:4290057-4290076 Msa1308130:intron 60.0%
CGGTCTAGACCACCTGAACC+GGG - chr8_4:4290077-4290096 Msa1308130:intron 60.0%
GAACCTGTCGAACCCGGTTC+AGG + chr8_4:4290092-4290111 None:intergenic 60.0%
!! TTCGAACTCGCCTCGGTGTC+AGG - chr8_4:4290112-4290131 Msa1308130:intron 60.0%
CACAAACTTTGTGGCGGCGG+TGG + chr8_4:4290178-4290197 None:intergenic 60.0%
GGTTCTGCCAGCAATGCAGC+AGG - chr8_4:4290246-4290265 Msa1308130:intron 60.0%
! ACAGCGGTGTTGGGGGATAG+GGG - chr8_4:4290585-4290604 Msa1308130:CDS 60.0%
GTGTTGGGGGATAGGGGAGA+AGG - chr8_4:4290591-4290610 Msa1308130:CDS 60.0%
TGGGGGATAGGGGAGAAGGT+TGG - chr8_4:4290595-4290614 Msa1308130:CDS 60.0%
CCGTACATGGGGAAATCCCG+AGG - chr8_4:4290672-4290691 Msa1308130:CDS 60.0%
GACAGTGGCGGTTTCTCCAC+CGG - chr8_4:4291322-4291341 Msa1308130:intron 60.0%
GACCCACGGGCTTTCCATGG+TGG - chr8_4:4289825-4289844 Msa1308130:intron 65.0%
GACCCACCATGGAAAGCCCG+TGG + chr8_4:4289831-4289850 None:intergenic 65.0%
CCTGTCGAACCCGGTTCAGG+TGG + chr8_4:4290089-4290108 None:intergenic 65.0%
CCACCTGAACCGGGTTCGAC+AGG - chr8_4:4290086-4290105 Msa1308130:intron 65.0%
CAACCTTCGGCCTGACACCG+AGG + chr8_4:4290125-4290144 None:intergenic 65.0%
TGCAACGACGGTGGCTGCCT+TGG + chr8_4:4290210-4290229 None:intergenic 65.0%
CAGCCACCGTCGTTGCAGCT+GGG - chr8_4:4290213-4290232 Msa1308130:intron 65.0%
CAACCCAGCTGCAACGACGG+TGG + chr8_4:4290219-4290238 None:intergenic 65.0%
GAAGGATCCCCGCCAGAGTC+TGG - chr8_4:4291278-4291297 Msa1308130:intron 65.0%
ATCGGAGGCTGCTGCTGCGG+CGG + chr8_4:4289613-4289632 None:intergenic 70.0%
!! TCGCCTCGGTGTCAGGCCGA+AGG - chr8_4:4290119-4290138 Msa1308130:intron 70.0%
GCAGCCACCGTCGTTGCAGC+TGG - chr8_4:4290212-4290231 Msa1308130:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 4289065 4291715 4289065 ID=Msa1308130;Name=Msa1308130
chr8_4 mRNA 4289065 4291715 4289065 ID=Msa1308130-mRNA-1;Parent=Msa1308130;Name=Msa1308130-mRNA-1;_AED=0.11;_eAED=0.11;_QI=368|1|1|1|0.66|0.5|4|294|335
chr8_4 exon 4289065 4289498 4289065 ID=Msa1308130-mRNA-1:exon:1328;Parent=Msa1308130-mRNA-1
chr8_4 exon 4289657 4289802 4289657 ID=Msa1308130-mRNA-1:exon:1327;Parent=Msa1308130-mRNA-1
chr8_4 exon 4290513 4291269 4290513 ID=Msa1308130-mRNA-1:exon:1326;Parent=Msa1308130-mRNA-1
chr8_4 exon 4291383 4291715 4291383 ID=Msa1308130-mRNA-1:exon:1325;Parent=Msa1308130-mRNA-1
chr8_4 five_prime_UTR 4291383 4291715 4291383 ID=Msa1308130-mRNA-1:five_prime_utr;Parent=Msa1308130-mRNA-1
chr8_4 five_prime_UTR 4291235 4291269 4291235 ID=Msa1308130-mRNA-1:five_prime_utr;Parent=Msa1308130-mRNA-1
chr8_4 CDS 4290513 4291234 4290513 ID=Msa1308130-mRNA-1:cds;Parent=Msa1308130-mRNA-1
chr8_4 CDS 4289657 4289802 4289657 ID=Msa1308130-mRNA-1:cds;Parent=Msa1308130-mRNA-1
chr8_4 CDS 4289359 4289498 4289359 ID=Msa1308130-mRNA-1:cds;Parent=Msa1308130-mRNA-1
chr8_4 three_prime_UTR 4289065 4289358 4289065 ID=Msa1308130-mRNA-1:three_prime_utr;Parent=Msa1308130-mRNA-1
Gene Sequence

>Msa1308130

ATGTTGGACTATGAATGGGGTAACCCAACAAACATCATGCTTACCGGAAATGAAGACAACAACTCCGCCGCAGCAGCAGCCTCCGATCAAGCCCACCGTCAAATTTTCGACCACTACGCTTCTCAAGCTATGTTATCCGACAACTACCTTAACGGACCTGGTTCTGGACCCACCATCGACATAAACAGTGGTGATTTTACTCATCATAATAACCACCACCACCACCAGAACCAGTTTAGCCAACAGGCCCAGCAGCACCATATCCATCAGTCCTTCTTCGACCCACGGGCTTTCCATGGTGGGTCATCAACTGGTTCTTCTTACCCTCCACCTCAACCACAACCTCCTTCCATGCTCTCCCTTGACCCTCTTCCTGGTCATGGACATGGACATGGCCCTGGATTCCTCCTCGTACCAAAATCCGAGGATGTTAACAGGCCCATAGACTTCGTGGGCTCTAGACTTGGACTCAACCTTGGTGGCCGCACATACTTCTCTTCCGAAGACGACTTCGTGAGCCGCCTTTACCGTCGGTCTAGACCACCTGAACCGGGTTCGACAGGTTCTTCGAACTCGCCTCGGTGTCAGGCCGAAGGTTGCAATGCTGATCTATCTCAGGCGAAGCACTACCACCGCCGCCACAAAGTTTGTGAGTTTCACTCCAAGGCAGCCACCGTCGTTGCAGCTGGGTTGACTCAGCGGTTCTGCCAGCAATGCAGCAGGTTCCATCTTCTATCTGAGTTTGATAATGGAAAACGTAGCTGCAGGAAGAGATTGGCTGATCATAATCGTCGCAGGAGAAAAACTCAGCACCCAAATACTCAAGATATTCACAAATCTCACAATACTTTGGATAATTCTTCCACAAGATCCCCGCCAGAGTCTGGAACTCAATCTACATCGTCGGTGACAGTGGCGGTTTCTCCACCGGATTATTTTCGACAAAGGTCGTACCAAAGCCCAAGCCCTTCAACAACTTCAAGCTCAATGTTTTTCTCCACCGGGTAG
Protein sequence

>Msa1308130

MLDYEWGNPTNIMLTGNEDNNSAAAAASDQAHRQIFDHYASQAMLSDNYLNGPGSGPTIDINSGDFTHHNNHHHHQNQFSQQAQQHHIHQSFFDPRAFHGGSSTGSSYPPPQPQPPSMLSLDPLPGHGHGHGPGFLLVPKSEDVNRPIDFVGSRLGLNLGGRTYFSSEDDFVSRLYRRSRPPEPGSTGSSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQHPNTQDIHKSHNTLDNSSTRSPPESGTQSTSSVTVAVSPPDYFRQRSYQSPSPSTTSSSMFFSTG*