AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203000 MtrunA17_Chr8g0373471 98.097 473 9 0 1 473 1 473 0.0 945
Msa1203000 MtrunA17_Chr5g0403901 73.319 461 103 4 19 467 18 470 0.0 592
Msa1203000 MtrunA17_Chr3g0139541 64.871 427 133 5 49 468 53 469 0.0 518
Msa1203000 MtrunA17_Chr8g0380211 62.560 414 150 3 62 470 67 480 4.49e-157 454
Msa1203000 MtrunA17_Chr1g0157751 50.547 457 210 5 20 466 6 456 3.43e-144 420
Msa1203000 MtrunA17_Chr7g0265481 51.816 413 185 3 63 465 51 459 8.19e-126 374
Msa1203000 MtrunA17_Chr8g0380191 57.637 347 106 3 122 467 10 316 6.60e-125 366
Msa1203000 MtrunA17_Chr1g0179621 47.484 457 229 4 17 465 9 462 2.18e-120 360
Msa1203000 MtrunA17_Chr2g0280401 28.982 383 252 7 100 465 87 466 1.99e-42 156
Msa1203000 MtrunA17_Chr3g0139621 48.305 118 38 2 301 395 27 144 1.14e-17 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203000 AT2G25737.1 59.915 469 167 6 15 468 13 475 2.14e-179 511
Msa1203000 AT2G25737.2 56.712 365 137 6 15 364 13 371 1.32e-122 362
Msa1203000 AT2G36630.1 47.962 417 207 3 57 465 42 456 1.66e-118 355
Msa1203000 AT1G11540.2 32.029 409 245 7 76 465 56 450 1.85e-46 167
Msa1203000 AT1G11540.1 31.496 381 228 7 104 465 1 367 1.12e-45 163
Msa1203000 AT1G61740.1 29.158 463 292 8 24 465 11 458 1.18e-44 162
Msa1203000 AT4G21250.1 31.690 426 236 9 68 465 51 449 5.86e-39 147
Msa1203000 AT4G21260.1 27.500 400 227 10 68 465 55 393 6.48e-29 118

Find 115 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAGGAGGTGGCTTCATTT+TGG 0.204042 8_1:-56745191 Msa1203000:CDS
TTCAAAATGCTGGTTATTCT+AGG 0.226848 8_1:+56748479 None:intergenic
GATGGAAAATGAAGAATATA+TGG 0.247767 8_1:-56744351 Msa1203000:CDS
TATCAGTTCTTATGTATGTT+TGG 0.264788 8_1:-56746212 Msa1203000:CDS
AAAGGAAACAATTATGAAAA+AGG 0.272024 8_1:-56746745 Msa1203000:intron
ATCAGTTCTTATGTATGTTT+GGG 0.291680 8_1:-56746211 Msa1203000:CDS
CCTATGCTTACTTTGATCAT+TGG 0.307184 8_1:-56747953 Msa1203000:CDS
TTGAAATGGGGTTTGGAAAC+AGG 0.308611 8_1:-56748578 None:intergenic
ATATATTGCACTTCAAACTA+TGG 0.315520 8_1:+56744051 None:intergenic
GCTATTGCAGGCATGATTAC+AGG 0.318014 8_1:-56747663 Msa1203000:intron
AGAAAGATAATTGCTATCTT+TGG 0.319840 8_1:-56744620 Msa1203000:CDS
AGGCATCGATACATGGAAAA+AGG 0.325374 8_1:-56746763 Msa1203000:CDS
GCCTTTGACTAAAGCTTTAG+TGG 0.329119 8_1:+56746782 None:intergenic
TAAACGGTATGTTACATAAT+TGG 0.337245 8_1:+56744077 None:intergenic
TTGGCTTCTTAATTCCTTGC+AGG 0.341432 8_1:-56746033 Msa1203000:intron
TAGAACCTGATTCCAACATT+TGG 0.359466 8_1:+56746612 None:intergenic
GAGAAGCATCAACAATTATA+TGG 0.361224 8_1:-56748344 Msa1203000:CDS
ATTAAGAAGCCAATACTCTA+TGG 0.361665 8_1:+56746043 None:intergenic
AGTTCCTTTGCATAAGCATA+TGG 0.364228 8_1:+56745318 None:intergenic
TTCGTCTTCCAAAACTCTTT+CGG 0.369986 8_1:+56748278 None:intergenic
TCTCATTGTTCAAATTCTTA+AGG 0.370958 8_1:-56746181 Msa1203000:intron
TAGTTTAGCCGAAAGAGTTT+TGG 0.383679 8_1:-56748286 Msa1203000:CDS
TGTTTCTTACCATAGGGTAC+TGG 0.386212 8_1:+56744804 None:intergenic
ATCACAGGTGGGGTGGGAAT+AGG 0.390427 8_1:-56744389 Msa1203000:intron
AGAACCTGATTCCAACATTT+GGG 0.395873 8_1:+56746613 None:intergenic
GTTGAGCAGGAAATGAAGTT+TGG 0.401432 8_1:-56748064 Msa1203000:intron
TGAACGGTTTGAAACAATAT+AGG 0.402736 8_1:+56748404 None:intergenic
GTTAGTGGTTTGCTTGGTCT+AGG 0.405722 8_1:-56745208 Msa1203000:CDS
AGAAGTTTCTTCTGGTATAG+TGG 0.415578 8_1:-56748228 Msa1203000:CDS
TTTGTGAGCGCAATCAGTTT+AGG 0.416463 8_1:-56744557 Msa1203000:intron
GAGAGGGCTGTAGAAGACTT+TGG 0.417036 8_1:+56747923 None:intergenic
TTAATGTCATATTTGCTGAT+TGG 0.419755 8_1:-56747509 Msa1203000:CDS
TTGGGAAGTGTAGGAGGAGT+AGG 0.421290 8_1:-56747995 Msa1203000:CDS
GAACTTTCAGGAAGCCTTTG+AGG 0.428813 8_1:-56746642 Msa1203000:intron
AGTGTAACAGAAATTGCAAT+AGG 0.433950 8_1:+56745349 None:intergenic
AAACTTGTTCCATAGAGTAT+TGG 0.436863 8_1:-56746052 Msa1203000:CDS
AGTCTTCCTATGAACGTGTT+TGG 0.439230 8_1:-56748203 Msa1203000:CDS
ATAATAGCTGGTATGGTTAG+TGG 0.442928 8_1:-56745223 Msa1203000:CDS
AGGCAACATGGTTGAGAAGA+TGG 0.444124 8_1:-56744369 Msa1203000:CDS
CTTCAAACTATGGTCATAAA+CGG 0.445809 8_1:+56744061 None:intergenic
GTAGGAGGAGTAGGAGGTGG+AGG 0.451115 8_1:-56747986 Msa1203000:CDS
ATGGAAAATGAAGAATATAT+GGG 0.453528 8_1:-56744350 Msa1203000:CDS
CTTTACTTGACAACATTCAC+TGG 0.454961 8_1:-56746242 Msa1203000:CDS
GCAGCCCAAATGTTGGAATC+AGG 0.455292 8_1:-56746617 Msa1203000:CDS
AGCAGGAAATGAAGTTTGGT+TGG 0.456534 8_1:-56748060 Msa1203000:intron
GCAACCATAGCTGCATTAAC+CGG 0.462747 8_1:-56744656 Msa1203000:CDS
CACAGGCCAAACACGTTCAT+AGG 0.464015 8_1:+56748197 None:intergenic
CAGTGAATGTTGTCAAGTAA+AGG 0.464845 8_1:+56746243 None:intergenic
GGTTTGCTTGGTCTAGGAGG+TGG 0.469170 8_1:-56745202 Msa1203000:CDS
ATTGTCGTAGGTTCTATTGT+TGG 0.473965 8_1:-56748034 Msa1203000:CDS
TTCCTAGCATTAGCATAGGC+TGG 0.478501 8_1:+56747550 None:intergenic
AGTGAATGTTGTCAAGTAAA+GGG 0.481684 8_1:+56746244 None:intergenic
GGCATGATTACAGGAGCCGC+TGG 0.482016 8_1:-56747654 Msa1203000:CDS
GGAATTGGGAATTCCTCCTC+AGG 0.483527 8_1:-56745155 Msa1203000:intron
CTGTGGAATAATAGCTGGTA+TGG 0.485082 8_1:-56745230 Msa1203000:CDS
AACTAGAGTAATTGCATCAA+GGG 0.487063 8_1:-56745299 Msa1203000:CDS
TGTTTCAAACCGTTCATACA+TGG 0.488172 8_1:-56748397 Msa1203000:exon
AGTGTAGGAGGAGTAGGAGG+TGG 0.490550 8_1:-56747989 Msa1203000:CDS
TGCTTCTGTGGAATAATAGC+TGG 0.491856 8_1:-56745235 Msa1203000:CDS
TTGGCTATCACAGGTGGGGT+GGG 0.492087 8_1:-56744395 Msa1203000:intron
TTTGGCTATCACAGGTGGGG+TGG 0.493274 8_1:-56744396 Msa1203000:intron
TCTTCATCTTGTAGATCAGC+TGG 0.493935 8_1:+56746365 None:intergenic
CTTTCTCACCACATGTTGGC+CGG 0.494055 8_1:+56744637 None:intergenic
GGTATGGTTAGTGGTTTGCT+TGG 0.496243 8_1:-56745214 Msa1203000:CDS
GGAAGTGTAGGAGGAGTAGG+AGG 0.499007 8_1:-56747992 Msa1203000:CDS
AGTTCTTATGTATGTTTGGG+TGG 0.502161 8_1:-56746208 Msa1203000:CDS
TTGCTTATCATTCTGTTCAT+CGG 0.504723 8_1:-56747474 Msa1203000:intron
GCAAGATCATAATCTATAAG+TGG 0.507543 8_1:+56747582 None:intergenic
GCAGATTGTGTAACAATGAC+TGG 0.507617 8_1:-56744188 Msa1203000:three_prime_UTR
GAACTAGAGTAATTGCATCA+AGG 0.511872 8_1:-56745300 Msa1203000:CDS
ATCTGTCTTTACTGCTTCTG+TGG 0.513821 8_1:-56745247 Msa1203000:CDS
CATTTGGGCTGCTTCCTCAA+AGG 0.514918 8_1:+56746628 None:intergenic
GGAGCAGCATTGGGAAGTGT+AGG 0.522662 8_1:-56748004 Msa1203000:CDS
CAAGGGGAAAGGAAATCACT+TGG 0.523181 8_1:-56745282 Msa1203000:CDS
ATAAGTGGCATGTCTAGTGT+AGG 0.528419 8_1:+56747597 None:intergenic
GTTTCTTACCATAGGGTACT+GGG 0.530425 8_1:+56744805 None:intergenic
TAGTCAAAGGCATCGATACA+TGG 0.531192 8_1:-56746770 Msa1203000:CDS
GATCGCTTCCCAGTACCCTA+TGG 0.534547 8_1:-56744813 Msa1203000:intron
CCAATGATCAAAGTAAGCAT+AGG 0.543311 8_1:+56747953 None:intergenic
GCAGCATTGGGAAGTGTAGG+AGG 0.544657 8_1:-56748001 Msa1203000:CDS
TTTCTCTTCCTCCATGTCAG+TGG 0.546653 8_1:-56744853 Msa1203000:CDS
CTTCAAAAGCCATGTATGAA+CGG 0.550042 8_1:+56748388 None:intergenic
CATTGTACATGAGAATGAGT+AGG 0.553335 8_1:+56744022 None:intergenic
CAATTATATGGCTAGTCTCG+TGG 0.555789 8_1:-56748332 Msa1203000:CDS
CAATGATCAAAGTAAGCATA+GGG 0.558927 8_1:+56747954 None:intergenic
AATATGTAGAAAATTTAGAA+AGG 0.559766 8_1:+56744223 None:intergenic
AGTGGTTTGCTTGGTCTAGG+AGG 0.560215 8_1:-56745205 Msa1203000:CDS
AGCTGATCTACAAGATGAAG+AGG 0.560678 8_1:-56746363 Msa1203000:intron
TGTCATATTTGCTGATTGGA+TGG 0.563702 8_1:-56747505 Msa1203000:CDS
TCCACTAAAGCTTTAGTCAA+AGG 0.565804 8_1:-56746783 Msa1203000:CDS
ATATATAATATTTACCTGCA+AGG 0.570892 8_1:+56746019 None:intergenic
CTAATTCCTAGCATTAGCAT+AGG 0.571256 8_1:+56747546 None:intergenic
TGAGGAAGCAGCCCAAATGT+TGG 0.572269 8_1:-56746624 Msa1203000:CDS
ACTTGACAACATTCACTGGA+AGG 0.572833 8_1:-56746238 Msa1203000:CDS
AGTAATTGCATCAAGGGGAA+AGG 0.574209 8_1:-56745293 Msa1203000:CDS
TGCATTAACCGGCCAACATG+TGG 0.574265 8_1:-56744645 Msa1203000:CDS
TAAGTGGCATGTCTAGTGTA+GGG 0.577620 8_1:+56747598 None:intergenic
GAAGCCATATGCTTATGCAA+AGG 0.580245 8_1:-56745322 Msa1203000:CDS
TTGGCCGGTTAATGCAGCTA+TGG 0.591965 8_1:+56744652 None:intergenic
CAACAGTGTATTACAATCTG+AGG 0.597031 8_1:-56747629 Msa1203000:CDS
TTTGGTTGGAGAATTGTCGT+AGG 0.615183 8_1:-56748046 Msa1203000:CDS
TGGAAAATGAAGAATATATG+GGG 0.615202 8_1:-56744349 Msa1203000:CDS
AATATACTAACACTTAGAGA+GGG 0.620159 8_1:+56747907 None:intergenic
TTATCTTTCTCACCACATGT+TGG 0.621904 8_1:+56744633 None:intergenic
GAATGAGTTTGTACCTGAGG+AGG 0.622331 8_1:+56745142 None:intergenic
AAATATACTAACACTTAGAG+AGG 0.625688 8_1:+56747906 None:intergenic
GCATGATTACAGGAGCCGCT+GGG 0.626454 8_1:-56747653 Msa1203000:CDS
ATAATATTGTACCACTGACA+TGG 0.629151 8_1:+56744842 None:intergenic
TTCCAGCCTATGCTAATGCT+AGG 0.630800 8_1:-56747552 Msa1203000:CDS
CTAATGCTAGGAATTAGCAT+TGG 0.634658 8_1:-56747540 Msa1203000:CDS
ACTAGAGTAATTGCATCAAG+GGG 0.654446 8_1:-56745298 Msa1203000:CDS
TTTGACAATCTCTGCCACCA+TGG 0.655124 8_1:-56744326 Msa1203000:CDS
TGGGGTGGGAATAGGCAACA+TGG 0.656926 8_1:-56744381 Msa1203000:CDS
GTAATACACTGTTGACCCAG+CGG 0.676926 8_1:+56747638 None:intergenic
ATATTGTACCACTGACATGG+AGG 0.737557 8_1:+56744845 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTTTTTTTGTTTTT+TGG + chr8_1:56744150-56744169 None:intergenic 10.0%
!!! ATAGATTCATATATATATTT+TGG - chr8_1:56745225-56745244 Msa1203000:CDS 10.0%
!! AGGTAAATATTATATATATT+TGG - chr8_1:56746576-56746595 Msa1203000:intron 10.0%
!!! TAAATCCTTAAAAAATTTTA+TGG - chr8_1:56747118-56747137 Msa1203000:intron 10.0%
!!! AAAAACCATAAAATTTTTTA+AGG + chr8_1:56747126-56747145 None:intergenic 10.0%
!! ATAGTTCTTAATTTAACATT+TGG - chr8_1:56746108-56746127 Msa1203000:intron 15.0%
!!! TAATTTATAACTTGCTTTTT+TGG - chr8_1:56746983-56747002 Msa1203000:intron 15.0%
!! TATCTTAAAAAAAACTGAAA+GGG + chr8_1:56747653-56747672 None:intergenic 15.0%
!! ATATCTTAAAAAAAACTGAA+AGG + chr8_1:56747654-56747673 None:intergenic 15.0%
!! TTAAACTTTCTATCATAAAT+GGG + chr8_1:56748115-56748134 None:intergenic 15.0%
!!! TAAATTTTATCCTTACTTTA+TGG + chr8_1:56748138-56748157 None:intergenic 15.0%
!!! AGTAAGGATAAAATTTATTT+TGG - chr8_1:56748141-56748160 Msa1203000:intron 15.0%
!! AATATGTAGAAAATTTAGAA+AGG + chr8_1:56748369-56748388 None:intergenic 15.0%
!!! ACATAAAAACAATTTTAAGA+TGG + chr8_1:56748440-56748459 None:intergenic 15.0%
!!! GATACTTTATGTTATGTTTT+TGG - chr8_1:56744432-56744451 Msa1203000:intron 20.0%
!! TCATGTCAATATTATAAATG+AGG + chr8_1:56744468-56744487 None:intergenic 20.0%
!! TTATATATATAGTCGATGTT+TGG - chr8_1:56744730-56744749 Msa1203000:intron 20.0%
!!! TATGTATTGGTATGTTTATT+TGG + chr8_1:56744883-56744902 None:intergenic 20.0%
!!! TTATTGTATTTTTTCCGAAT+TGG - chr8_1:56745325-56745344 Msa1203000:CDS 20.0%
!!! TATTGTATTTTTTCCGAATT+GGG - chr8_1:56745326-56745345 Msa1203000:CDS 20.0%
!! GTTCTTGAAAAAATTGAATT+TGG + chr8_1:56745749-56745768 None:intergenic 20.0%
!! AAAGGAAACAATTATGAAAA+AGG - chr8_1:56745844-56745863 Msa1203000:intron 20.0%
!! TTAATTAACACAAATAAGAG+AGG - chr8_1:56746084-56746103 Msa1203000:intron 20.0%
!! TTCTTAAGGTAGTTAATATT+TGG - chr8_1:56746422-56746441 Msa1203000:intron 20.0%
!! ATATATAATATTTACCTGCA+AGG + chr8_1:56746573-56746592 None:intergenic 20.0%
!!! ATACTACTATATCACAATTT+TGG + chr8_1:56746688-56746707 None:intergenic 20.0%
!! TGATATAGTAGTATACATAA+AGG - chr8_1:56746694-56746713 Msa1203000:intron 20.0%
!!! AATTAATTGTGATTTGTTGA+CGG + chr8_1:56746792-56746811 None:intergenic 20.0%
!! TTAATAAGAGAAATGTTAAC+CGG - chr8_1:56746850-56746869 Msa1203000:intron 20.0%
!!! CCTTTTTTAGTATTCTTAAT+CGG + chr8_1:56746888-56746907 None:intergenic 20.0%
!! ACTAAAATACATATCTTGAT+TGG - chr8_1:56747148-56747167 Msa1203000:intron 20.0%
!!! TTGATGAATATTTTTGAATG+TGG - chr8_1:56747678-56747697 Msa1203000:intron 20.0%
!!! ATATATTGTTTCTTACCATA+GGG + chr8_1:56747794-56747813 None:intergenic 20.0%
!!! TATATATTGTTTCTTACCAT+AGG + chr8_1:56747795-56747814 None:intergenic 20.0%
!! GTTAAACTTTCTATCATAAA+TGG + chr8_1:56748116-56748135 None:intergenic 20.0%
!! ATGGAAAATGAAGAATATAT+GGG - chr8_1:56748239-56748258 Msa1203000:CDS 20.0%
!!! TGTTTTTATGTGTTTTTGTT+TGG - chr8_1:56748449-56748468 Msa1203000:five_prime_UTR 20.0%
!! TTTTTCATGACAACAATTTC+TGG + chr8_1:56744340-56744359 None:intergenic 25.0%
! TGAAAAAAAGAAGTTTCTTC+TGG - chr8_1:56744353-56744372 Msa1203000:CDS 25.0%
! AAAATGTTTGATAAACTCAC+AGG + chr8_1:56744412-56744431 None:intergenic 25.0%
! TTGACATGATGTTATGAAAT+TGG - chr8_1:56744479-56744498 Msa1203000:intron 25.0%
! AATATACTAACACTTAGAGA+GGG + chr8_1:56744685-56744704 None:intergenic 25.0%
! AAATATACTAACACTTAGAG+AGG + chr8_1:56744686-56744705 None:intergenic 25.0%
! CAGAAAGAATACATATGTAT+TGG + chr8_1:56744896-56744915 None:intergenic 25.0%
!! TTAATGTCATATTTGCTGAT+TGG - chr8_1:56745080-56745099 Msa1203000:intron 25.0%
! AATAACCAAATGCAATATGT+TGG + chr8_1:56745310-56745329 None:intergenic 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr8_1:56745558-56745577 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr8_1:56745571-56745590 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr8_1:56745570-56745589 Msa1203000:intron 25.0%
! TACTCTTACTATAAAGTAGA+AGG + chr8_1:56745917-56745936 None:intergenic 25.0%
! TATCAGTTCTTATGTATGTT+TGG - chr8_1:56746377-56746396 Msa1203000:CDS 25.0%
! ATCAGTTCTTATGTATGTTT+GGG - chr8_1:56746378-56746397 Msa1203000:CDS 25.0%
! TCTCATTGTTCAAATTCTTA+AGG - chr8_1:56746408-56746427 Msa1203000:intron 25.0%
! AGTTGTATAACTTCATAGAT+TGG - chr8_1:56746637-56746656 Msa1203000:intron 25.0%
! TAATACAAATGTTCCTATGT+AGG + chr8_1:56746725-56746744 None:intergenic 25.0%
!!! GGTGTAAATTTTTTTACATC+AGG + chr8_1:56746771-56746790 None:intergenic 25.0%
! CCGATTAAGAATACTAAAAA+AGG - chr8_1:56746885-56746904 Msa1203000:intron 25.0%
!!! CATAAAACTATTTCTATGCA+AGG - chr8_1:56747177-56747196 Msa1203000:intron 25.0%
!!! GTGTGCTATTTATCAATTTA+AGG - chr8_1:56747215-56747234 Msa1203000:intron 25.0%
! CTCAATCGAATATATTAATG+AGG - chr8_1:56747518-56747537 Msa1203000:CDS 25.0%
!!! ATTATTTTACAACTGTTTCG+AGG + chr8_1:56747601-56747620 None:intergenic 25.0%
!!! TGAATATTTTTGAATGTGGT+AGG - chr8_1:56747682-56747701 Msa1203000:intron 25.0%
! GAATGTAGATATGATGATAT+TGG - chr8_1:56747818-56747837 Msa1203000:intron 25.0%
! AGAAAGATAATTGCTATCTT+TGG - chr8_1:56747969-56747988 Msa1203000:CDS 25.0%
! GAAAGTTTAACCATAAAGTA+AGG - chr8_1:56748125-56748144 Msa1203000:intron 25.0%
!! TAGTAACAATGTCTCATTTT+TGG - chr8_1:56748175-56748194 Msa1203000:intron 25.0%
! GATGGAAAATGAAGAATATA+TGG - chr8_1:56748238-56748257 Msa1203000:CDS 25.0%
! TGGAAAATGAAGAATATATG+GGG - chr8_1:56748240-56748259 Msa1203000:CDS 25.0%
! TAAACGGTATGTTACATAAT+TGG + chr8_1:56748515-56748534 None:intergenic 25.0%
! ATATATTGCACTTCAAACTA+TGG + chr8_1:56748541-56748560 None:intergenic 25.0%
! TTCAAAATGCTGGTTATTCT+AGG + chr8_1:56744113-56744132 None:intergenic 30.0%
!!! CTACTACTTTTTCAAAATGC+TGG + chr8_1:56744123-56744142 None:intergenic 30.0%
! TGAACGGTTTGAAACAATAT+AGG + chr8_1:56744188-56744207 None:intergenic 30.0%
!! GAGAAGCATCAACAATTATA+TGG - chr8_1:56744245-56744264 Msa1203000:three_prime_UTR 30.0%
!!! GGTTCTATTGTTGGATTTTT+TGG - chr8_1:56744564-56744583 Msa1203000:CDS 30.0%
CAATGATCAAAGTAAGCATA+GGG + chr8_1:56744638-56744657 None:intergenic 30.0%
! TGATTTCTTATTGCTATTGC+AGG - chr8_1:56744914-56744933 Msa1203000:intron 30.0%
GCAAGATCATAATCTATAAG+TGG + chr8_1:56745010-56745029 None:intergenic 30.0%
TTGCTTATCATTCTGTTCAT+CGG - chr8_1:56745115-56745134 Msa1203000:intron 30.0%
TGTTTAGCATAATTGCTCTT+GGG - chr8_1:56745152-56745171 Msa1203000:intron 30.0%
!!! CTCTTCTGTTTGTGTTTTTT+GGG - chr8_1:56745181-56745200 Msa1203000:CDS 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - chr8_1:56745473-56745492 Msa1203000:intron 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr8_1:56745545-56745564 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr8_1:56745596-56745615 Msa1203000:intron 30.0%
AAATCTAGACAGTTTGATGT+CGG - chr8_1:56745665-56745684 Msa1203000:intron 30.0%
TGTAATAACTGGAAGTTTGT+AGG + chr8_1:56746019-56746038 None:intergenic 30.0%
TTCCAGTTATTACATGTAGA+TGG - chr8_1:56746025-56746044 Msa1203000:intron 30.0%
!! TTCAGAAGCATCTGATATAA+GGG + chr8_1:56746186-56746205 None:intergenic 30.0%
TGAAGAGGTAATTATTTCCA+AGG - chr8_1:56746241-56746260 Msa1203000:CDS 30.0%
GAAGAGGTAATTATTTCCAA+GGG - chr8_1:56746242-56746261 Msa1203000:CDS 30.0%
ACTCTCTATAAAGAATGATC+TGG + chr8_1:56746272-56746291 None:intergenic 30.0%
TCTTTATAGAGAGTTCATTG+AGG - chr8_1:56746278-56746297 Msa1203000:intron 30.0%
TATGTTAAATTCTTGTGTGC+AGG - chr8_1:56746321-56746340 Msa1203000:intron 30.0%
AGTGAATGTTGTCAAGTAAA+GGG + chr8_1:56746348-56746367 None:intergenic 30.0%
! AAACTTGTTCCATAGAGTAT+TGG - chr8_1:56746537-56746556 Msa1203000:intron 30.0%
ATTAAGAAGCCAATACTCTA+TGG + chr8_1:56746549-56746568 None:intergenic 30.0%
!! CACAATTTTGGTCTTTTAAC+AGG + chr8_1:56746676-56746695 None:intergenic 30.0%
CATAAAGGTTTATCCTACAT+AGG - chr8_1:56746709-56746728 Msa1203000:intron 30.0%
!! TAAAAAAGTGTCATGCTAAC+CGG + chr8_1:56747034-56747053 None:intergenic 30.0%
AGTGTAACAGAAATTGCAAT+AGG + chr8_1:56747243-56747262 None:intergenic 30.0%
AACTAGAGTAATTGCATCAA+GGG - chr8_1:56747290-56747309 Msa1203000:intron 30.0%
ATTCCCAATTCCAAAAACAA+TGG + chr8_1:56747426-56747445 None:intergenic 30.0%
CGAATATATTAATGAGGTCT+CGG - chr8_1:56747524-56747543 Msa1203000:CDS 30.0%
ATAATATTGTACCACTGACA+TGG + chr8_1:56747750-56747769 None:intergenic 30.0%
AACTTTCTATCATAAATGGG+TGG + chr8_1:56748112-56748131 None:intergenic 30.0%
!!! AAACCCCAAATTTTTTTCCA+TGG + chr8_1:56748283-56748302 None:intergenic 30.0%
CTTCAAACTATGGTCATAAA+CGG + chr8_1:56748531-56748550 None:intergenic 30.0%
TGTTTCAAACCGTTCATACA+TGG - chr8_1:56744192-56744211 Msa1203000:three_prime_UTR 35.0%
CTTCAAAAGCCATGTATGAA+CGG + chr8_1:56744204-56744223 None:intergenic 35.0%
!!! GGCTTTTGAAGTTCAAAAGA+AGG - chr8_1:56744213-56744232 Msa1203000:three_prime_UTR 35.0%
! TAGTTTAGCCGAAAGAGTTT+TGG - chr8_1:56744303-56744322 Msa1203000:exon 35.0%
TTCGTCTTCCAAAACTCTTT+CGG + chr8_1:56744314-56744333 None:intergenic 35.0%
AGAAGTTTCTTCTGGTATAG+TGG - chr8_1:56744361-56744380 Msa1203000:CDS 35.0%
!! TTGGTGATGATGCATTGTAA+TGG - chr8_1:56744498-56744517 Msa1203000:intron 35.0%
!!! TTGTAATGGTTTTGTTGAGC+AGG - chr8_1:56744512-56744531 Msa1203000:intron 35.0%
ATTGTCGTAGGTTCTATTGT+TGG - chr8_1:56744555-56744574 Msa1203000:intron 35.0%
CCAATGATCAAAGTAAGCAT+AGG + chr8_1:56744639-56744658 None:intergenic 35.0%
CCTATGCTTACTTTGATCAT+TGG - chr8_1:56744636-56744655 Msa1203000:CDS 35.0%
!!! TACAGTTTTGGACCTGAAAT+TGG - chr8_1:56744787-56744806 Msa1203000:intron 35.0%
TTTGTAGCTTCACCAATTTC+AGG + chr8_1:56744802-56744821 None:intergenic 35.0%
AAGCTACAAATAGTAGCATG+TGG - chr8_1:56744812-56744831 Msa1203000:intron 35.0%
TACAAATAGTAGCATGTGGT+TGG - chr8_1:56744816-56744835 Msa1203000:CDS 35.0%
CAACAGTGTATTACAATCTG+AGG - chr8_1:56744960-56744979 Msa1203000:intron 35.0%
CTAATTCCTAGCATTAGCAT+AGG + chr8_1:56745046-56745065 None:intergenic 35.0%
CTAATGCTAGGAATTAGCAT+TGG - chr8_1:56745049-56745068 Msa1203000:intron 35.0%
! TGTCATATTTGCTGATTGGA+TGG - chr8_1:56745084-56745103 Msa1203000:intron 35.0%
CTGTTTAGCATAATTGCTCT+TGG - chr8_1:56745151-56745170 Msa1203000:intron 35.0%
!!! GCTCTTCTGTTTGTGTTTTT+TGG - chr8_1:56745180-56745199 Msa1203000:CDS 35.0%
!!! TTTTTTGGGAAAGAAGCACA+TGG - chr8_1:56745195-56745214 Msa1203000:CDS 35.0%
! TGTTGATTGTGTAAATGCGT+TGG + chr8_1:56745366-56745385 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + chr8_1:56745478-56745497 None:intergenic 35.0%
! TCCACTAAAGCTTTAGTCAA+AGG - chr8_1:56745806-56745825 Msa1203000:intron 35.0%
TACTATGCTACTGAACTTTC+AGG - chr8_1:56745935-56745954 Msa1203000:intron 35.0%
AGAACCTGATTCCAACATTT+GGG + chr8_1:56745979-56745998 None:intergenic 35.0%
TAGAACCTGATTCCAACATT+TGG + chr8_1:56745980-56745999 None:intergenic 35.0%
AGCCATCTACATGTAATAAC+TGG + chr8_1:56746030-56746049 None:intergenic 35.0%
!! TCAGAAGCATCTGATATAAG+GGG + chr8_1:56746185-56746204 None:intergenic 35.0%
!! CTTCAGAAGCATCTGATATA+AGG + chr8_1:56746187-56746206 None:intergenic 35.0%
CAGTGAATGTTGTCAAGTAA+AGG + chr8_1:56746349-56746368 None:intergenic 35.0%
CTTTACTTGACAACATTCAC+TGG - chr8_1:56746347-56746366 Msa1203000:intron 35.0%
AGTTCTTATGTATGTTTGGG+TGG - chr8_1:56746381-56746400 Msa1203000:CDS 35.0%
! AGTATTCTTAATCGGTGTTC+CGG + chr8_1:56746880-56746899 None:intergenic 35.0%
TGCAAGGTCTAACTGAAATT+TGG - chr8_1:56747193-56747212 Msa1203000:intron 35.0%
AGTTCCTTTGCATAAGCATA+TGG + chr8_1:56747274-56747293 None:intergenic 35.0%
GAACTAGAGTAATTGCATCA+AGG - chr8_1:56747289-56747308 Msa1203000:intron 35.0%
ACTAGAGTAATTGCATCAAG+GGG - chr8_1:56747291-56747310 Msa1203000:intron 35.0%
ATAATAGCTGGTATGGTTAG+TGG - chr8_1:56747366-56747385 Msa1203000:intron 35.0%
!!! CATTTTGGGACCATTGTTTT+TGG - chr8_1:56747413-56747432 Msa1203000:intron 35.0%
!!! GGACCATTGTTTTTGGAATT+GGG - chr8_1:56747420-56747439 Msa1203000:intron 35.0%
AATGAATGAGTTTGTACCTG+AGG + chr8_1:56747453-56747472 None:intergenic 35.0%
TTAATGAGGTCTCGGTTTAA+TGG - chr8_1:56747532-56747551 Msa1203000:CDS 35.0%
! TGCTACATCAACTTTTGCTA+TGG - chr8_1:56747712-56747731 Msa1203000:intron 35.0%
TTATCTTTCTCACCACATGT+TGG + chr8_1:56747959-56747978 None:intergenic 35.0%
TGCCACCATGGAAAAAAATT+TGG - chr8_1:56748275-56748294 Msa1203000:CDS 35.0%
GCCACCATGGAAAAAAATTT+GGG - chr8_1:56748276-56748295 Msa1203000:CDS 35.0%
CCACCATGGAAAAAAATTTG+GGG - chr8_1:56748277-56748296 Msa1203000:CDS 35.0%
CATTGTACATGAGAATGAGT+AGG + chr8_1:56748570-56748589 None:intergenic 35.0%
!! CAATTATATGGCTAGTCTCG+TGG - chr8_1:56744257-56744276 Msa1203000:three_prime_UTR 40.0%
AGTCTTCCTATGAACGTGTT+TGG - chr8_1:56744386-56744405 Msa1203000:intron 40.0%
GTTGAGCAGGAAATGAAGTT+TGG - chr8_1:56744525-56744544 Msa1203000:intron 40.0%
AGCAGGAAATGAAGTTTGGT+TGG - chr8_1:56744529-56744548 Msa1203000:intron 40.0%
TTTGGTTGGAGAATTGTCGT+AGG - chr8_1:56744543-56744562 Msa1203000:intron 40.0%
!!! TGGATTTTTTGGAGCAGCAT+TGG - chr8_1:56744575-56744594 Msa1203000:CDS 40.0%
!!! GGATTTTTTGGAGCAGCATT+GGG - chr8_1:56744576-56744595 Msa1203000:CDS 40.0%
! TCGCGTCTCAAATACAGTTT+TGG - chr8_1:56744775-56744794 Msa1203000:intron 40.0%
TTCATATAGTTTCCGAACCG+CGG + chr8_1:56744842-56744861 None:intergenic 40.0%
!! ATATGAACTAGCTCTGAACG+CGG - chr8_1:56744855-56744874 Msa1203000:CDS 40.0%
TAAGTGGCATGTCTAGTGTA+GGG + chr8_1:56744994-56745013 None:intergenic 40.0%
ATAAGTGGCATGTCTAGTGT+AGG + chr8_1:56744995-56745014 None:intergenic 40.0%
TGCAGCCAACATATTGCATT+TGG - chr8_1:56745302-56745321 Msa1203000:CDS 40.0%
TTGCTTAGGCAATCCCAATT+CGG + chr8_1:56745342-56745361 None:intergenic 40.0%
GTAAATGCGTTGGATTGCTT+AGG + chr8_1:56745356-56745375 None:intergenic 40.0%
ACCGACAAATTGAGATCAGA+CGG - chr8_1:56745394-56745413 Msa1203000:intron 40.0%
ACCGTCTGATCTCAATTTGT+CGG + chr8_1:56745398-56745417 None:intergenic 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + chr8_1:56745535-56745554 None:intergenic 40.0%
! TATCCAGTTGATGCAACACA+TGG - chr8_1:56745772-56745791 Msa1203000:intron 40.0%
TTGATGCAACACATGGTGAT+AGG - chr8_1:56745779-56745798 Msa1203000:intron 40.0%
! GCCTTTGACTAAAGCTTTAG+TGG + chr8_1:56745810-56745829 None:intergenic 40.0%
!! TAGTCAAAGGCATCGATACA+TGG - chr8_1:56745819-56745838 Msa1203000:intron 40.0%
!! AGGCATCGATACATGGAAAA+AGG - chr8_1:56745826-56745845 Msa1203000:intron 40.0%
GTTTGTAGGCACTTACAATC+AGG + chr8_1:56746005-56746024 None:intergenic 40.0%
TCTTCATCTTGTAGATCAGC+TGG + chr8_1:56746227-56746246 None:intergenic 40.0%
AGCTGATCTACAAGATGAAG+AGG - chr8_1:56746226-56746245 Msa1203000:CDS 40.0%
AGAATGATCTGGAAAACCCT+TGG + chr8_1:56746261-56746280 None:intergenic 40.0%
ACTTGACAACATTCACTGGA+AGG - chr8_1:56746351-56746370 Msa1203000:intron 40.0%
TTGGCTTCTTAATTCCTTGC+AGG - chr8_1:56746556-56746575 Msa1203000:intron 40.0%
! TATTCTTAATCGGTGTTCCG+GGG + chr8_1:56746878-56746897 None:intergenic 40.0%
! GTATTCTTAATCGGTGTTCC+GGG + chr8_1:56746879-56746898 None:intergenic 40.0%
GAAGCCATATGCTTATGCAA+AGG - chr8_1:56747267-56747286 Msa1203000:intron 40.0%
AGTAATTGCATCAAGGGGAA+AGG - chr8_1:56747296-56747315 Msa1203000:intron 40.0%
ATCTGTCTTTACTGCTTCTG+TGG - chr8_1:56747342-56747361 Msa1203000:intron 40.0%
TGCTTCTGTGGAATAATAGC+TGG - chr8_1:56747354-56747373 Msa1203000:intron 40.0%
CTGTGGAATAATAGCTGGTA+TGG - chr8_1:56747359-56747378 Msa1203000:intron 40.0%
!!! GGGACCATTGTTTTTGGAAT+TGG - chr8_1:56747419-56747438 Msa1203000:intron 40.0%
ATATTGTACCACTGACATGG+AGG + chr8_1:56747747-56747766 None:intergenic 40.0%
! GTTTCTTACCATAGGGTACT+GGG + chr8_1:56747787-56747806 None:intergenic 40.0%
TGTTTCTTACCATAGGGTAC+TGG + chr8_1:56747788-56747807 None:intergenic 40.0%
ACTGATTGCGCTCACAAAAA+TGG + chr8_1:56748030-56748049 None:intergenic 40.0%
TTTGTGAGCGCAATCAGTTT+AGG - chr8_1:56748032-56748051 Msa1203000:CDS 40.0%
!!! GTCTCATTTTTGGCTATCAC+AGG - chr8_1:56748185-56748204 Msa1203000:intron 40.0%
!!! TCATTTTTGGCTATCACAGG+TGG - chr8_1:56748188-56748207 Msa1203000:intron 40.0%
!!! CATTTTTGGCTATCACAGGT+GGG - chr8_1:56748189-56748208 Msa1203000:intron 40.0%
!!! ATTTTTGGCTATCACAGGTG+GGG - chr8_1:56748190-56748209 Msa1203000:intron 40.0%
!!! CCCCAAATTTTTTTCCATGG+TGG + chr8_1:56748280-56748299 None:intergenic 40.0%
GCAGATTGTGTAACAATGAC+TGG - chr8_1:56748401-56748420 Msa1203000:five_prime_UTR 40.0%
GCTATTGCAGGCATGATTAC+AGG - chr8_1:56744926-56744945 Msa1203000:intron 45.0%
GTAATACACTGTTGACCCAG+CGG + chr8_1:56744954-56744973 None:intergenic 45.0%
TTCCAGCCTATGCTAATGCT+AGG - chr8_1:56745037-56745056 Msa1203000:intron 45.0%
TTCCTAGCATTAGCATAGGC+TGG + chr8_1:56745042-56745061 None:intergenic 45.0%
ATCAGCATATAGGTGGTCGT+TGG + chr8_1:56745692-56745711 None:intergenic 45.0%
TCACGCAATCAGCATATAGG+TGG + chr8_1:56745699-56745718 None:intergenic 45.0%
GCATCACGCAATCAGCATAT+AGG + chr8_1:56745702-56745721 None:intergenic 45.0%
TCACCATGTGTTGCATCAAC+TGG + chr8_1:56745778-56745797 None:intergenic 45.0%
GAACTTTCAGGAAGCCTTTG+AGG - chr8_1:56745947-56745966 Msa1203000:intron 45.0%
CAAGGGGAAAGGAAATCACT+TGG - chr8_1:56747307-56747326 Msa1203000:intron 45.0%
!! GGTATGGTTAGTGGTTTGCT+TGG - chr8_1:56747375-56747394 Msa1203000:intron 45.0%
!! GTTAGTGGTTTGCTTGGTCT+AGG - chr8_1:56747381-56747400 Msa1203000:intron 45.0%
! TCTAGGAGGTGGCTTCATTT+TGG - chr8_1:56747398-56747417 Msa1203000:intron 45.0%
! CTAGGAGGTGGCTTCATTTT+GGG - chr8_1:56747399-56747418 Msa1203000:intron 45.0%
GAATGAGTTTGTACCTGAGG+AGG + chr8_1:56747450-56747469 None:intergenic 45.0%
TTTCTCTTCCTCCATGTCAG+TGG - chr8_1:56747736-56747755 Msa1203000:intron 45.0%
GCAACCATAGCTGCATTAAC+CGG - chr8_1:56747933-56747952 Msa1203000:CDS 45.0%
AGGCAACATGGTTGAGAAGA+TGG - chr8_1:56748220-56748239 Msa1203000:CDS 45.0%
TTTGACAATCTCTGCCACCA+TGG - chr8_1:56748263-56748282 Msa1203000:CDS 45.0%
CACAGGCCAAACACGTTCAT+AGG + chr8_1:56744395-56744414 None:intergenic 50.0%
! TTGGGAAGTGTAGGAGGAGT+AGG - chr8_1:56744594-56744613 Msa1203000:CDS 50.0%
GAGAGGGCTGTAGAAGACTT+TGG + chr8_1:56744669-56744688 None:intergenic 50.0%
CATTTGGGCTGCTTCCTCAA+AGG + chr8_1:56745964-56745983 None:intergenic 50.0%
TGAGGAAGCAGCCCAAATGT+TGG - chr8_1:56745965-56745984 Msa1203000:intron 50.0%
GCAGCCCAAATGTTGGAATC+AGG - chr8_1:56745972-56745991 Msa1203000:intron 50.0%
AGAAATGTTAACCGGTGCCC+CGG - chr8_1:56746858-56746877 Msa1203000:intron 50.0%
GTATCCTTAACCAGTGCCCA+GGG - chr8_1:56747005-56747024 Msa1203000:intron 50.0%
!! AGTGGTTTGCTTGGTCTAGG+AGG - chr8_1:56747384-56747403 Msa1203000:intron 50.0%
GGAATTGGGAATTCCTCCTC+AGG - chr8_1:56747434-56747453 Msa1203000:intron 50.0%
TTGGCCGGTTAATGCAGCTA+TGG + chr8_1:56747940-56747959 None:intergenic 50.0%
TGCATTAACCGGCCAACATG+TGG - chr8_1:56747944-56747963 Msa1203000:CDS 50.0%
CTTTCTCACCACATGTTGGC+CGG + chr8_1:56747955-56747974 None:intergenic 50.0%
! GGAGCAGCATTGGGAAGTGT+AGG - chr8_1:56744585-56744604 Msa1203000:CDS 55.0%
! GCAGCATTGGGAAGTGTAGG+AGG - chr8_1:56744588-56744607 Msa1203000:CDS 55.0%
! GGAAGTGTAGGAGGAGTAGG+AGG - chr8_1:56744597-56744616 Msa1203000:CDS 55.0%
AGTGTAGGAGGAGTAGGAGG+TGG - chr8_1:56744600-56744619 Msa1203000:CDS 55.0%
! TAGTAGCATGTGGTTGGCCG+CGG - chr8_1:56744822-56744841 Msa1203000:CDS 55.0%
GCATGATTACAGGAGCCGCT+GGG - chr8_1:56744936-56744955 Msa1203000:intron 55.0%
GGTATCCTTAACCAGTGCCC+AGG - chr8_1:56747004-56747023 Msa1203000:intron 55.0%
TCATGCTAACCGGTGTCCCT+GGG + chr8_1:56747024-56747043 None:intergenic 55.0%
! GGTTTGCTTGGTCTAGGAGG+TGG - chr8_1:56747387-56747406 Msa1203000:intron 55.0%
GATCGCTTCCCAGTACCCTA+TGG - chr8_1:56747776-56747795 Msa1203000:intron 55.0%
TTTGGCTATCACAGGTGGGG+TGG - chr8_1:56748193-56748212 Msa1203000:intron 55.0%
TTGGCTATCACAGGTGGGGT+GGG - chr8_1:56748194-56748213 Msa1203000:intron 55.0%
ATCACAGGTGGGGTGGGAAT+AGG - chr8_1:56748200-56748219 Msa1203000:CDS 55.0%
TGGGGTGGGAATAGGCAACA+TGG - chr8_1:56748208-56748227 Msa1203000:CDS 55.0%
GTAGGAGGAGTAGGAGGTGG+AGG - chr8_1:56744603-56744622 Msa1203000:CDS 60.0%
GGCATGATTACAGGAGCCGC+TGG - chr8_1:56744935-56744954 Msa1203000:intron 60.0%
! TAATCGGTGTTCCGGGGCAC+CGG + chr8_1:56746872-56746891 None:intergenic 60.0%
!! GTGTCCCTGGGCACTGGTTA+AGG + chr8_1:56747012-56747031 None:intergenic 60.0%
TAACCAGTGCCCAGGGACAC+CGG - chr8_1:56747012-56747031 Msa1203000:intron 60.0%
GTCATGCTAACCGGTGTCCC+TGG + chr8_1:56747025-56747044 None:intergenic 60.0%
! GCATGTGGTTGGCCGCGGTT+CGG - chr8_1:56744827-56744846 Msa1203000:CDS 65.0%
TAACCGGTGTCCCTGGGCAC+TGG + chr8_1:56747018-56747037 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 56744018 56748593 56744018 ID=Msa1203000;Name=Msa1203000
chr8_1 mRNA 56744018 56748593 56744018 ID=Msa1203000-mRNA-1;Parent=Msa1203000;Name=Msa1203000-mRNA-1;_AED=0.19;_eAED=0.19;_QI=193|1|1|1|1|1|12|289|473
chr8_1 exon 56744018 56744404 56744018 ID=Msa1203000-mRNA-1:exon:18540;Parent=Msa1203000-mRNA-1
chr8_1 exon 56744558 56744698 56744558 ID=Msa1203000-mRNA-1:exon:18539;Parent=Msa1203000-mRNA-1
chr8_1 exon 56744814 56744907 56744814 ID=Msa1203000-mRNA-1:exon:18538;Parent=Msa1203000-mRNA-1
chr8_1 exon 56745156 56745374 56745156 ID=Msa1203000-mRNA-1:exon:18537;Parent=Msa1203000-mRNA-1
chr8_1 exon 56746034 56746084 56746034 ID=Msa1203000-mRNA-1:exon:18536;Parent=Msa1203000-mRNA-1
chr8_1 exon 56746182 56746268 56746182 ID=Msa1203000-mRNA-1:exon:18535;Parent=Msa1203000-mRNA-1
chr8_1 exon 56746364 56746416 56746364 ID=Msa1203000-mRNA-1:exon:18534;Parent=Msa1203000-mRNA-1
chr8_1 exon 56746603 56746654 56746603 ID=Msa1203000-mRNA-1:exon:18533;Parent=Msa1203000-mRNA-1
chr8_1 exon 56746746 56746810 56746746 ID=Msa1203000-mRNA-1:exon:18532;Parent=Msa1203000-mRNA-1
chr8_1 exon 56747475 56747675 56747475 ID=Msa1203000-mRNA-1:exon:18531;Parent=Msa1203000-mRNA-1
chr8_1 exon 56747918 56748077 56747918 ID=Msa1203000-mRNA-1:exon:18530;Parent=Msa1203000-mRNA-1
chr8_1 exon 56748200 56748593 56748200 ID=Msa1203000-mRNA-1:exon:18529;Parent=Msa1203000-mRNA-1
chr8_1 five_prime_UTR 56748401 56748593 56748401 ID=Msa1203000-mRNA-1:five_prime_utr;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56748200 56748400 56748200 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56747918 56748077 56747918 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56747475 56747675 56747475 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56746746 56746810 56746746 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56746603 56746654 56746603 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56746364 56746416 56746364 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56746182 56746268 56746182 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56746034 56746084 56746034 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56745156 56745374 56745156 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56744814 56744907 56744814 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56744558 56744698 56744558 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 CDS 56744307 56744404 56744307 ID=Msa1203000-mRNA-1:cds;Parent=Msa1203000-mRNA-1
chr8_1 three_prime_UTR 56744018 56744306 56744018 ID=Msa1203000-mRNA-1:three_prime_utr;Parent=Msa1203000-mRNA-1
Gene Sequence

>Msa1203000

ATGGCTTTTGAAGTTCAAAAGAAGGCGATATCAAGAGAAGCATCAACAATTATATGGCTAGTCTCGTGGAGTCTTATTATGATCTATCATGTTAGTTTAGCCGAAAGAGTTTTGGAAGACGAAAAACCAGAAATTGTTGTCATGAAAAAAAGAAGTTTCTTCTGGTATAGTGGAGAGTCTTCCTATGAACGTGTTTGGCCTGAAATGAAGTTTGGTTGGAGAATTGTCGTAGGTTCTATTGTTGGATTTTTTGGAGCAGCATTGGGAAGTGTAGGAGGAGTAGGAGGTGGAGGAATTTTTATCCCTATGCTTACTTTGATCATTGGTTTTGATCCAAAGTCTTCTACAGCCCTCTCTAAGTGCATGATTACAGGAGCCGCTGGGTCAACAGTGTATTACAATCTGAGGCTTAGACACCCTACACTAGACATGCCACTTATAGATTATGATCTTGCTTTGCTCTTCCAGCCTATGCTAATGCTAGGAATTAGCATTGGTGTTGCATTTAATGTCATATTTGCTGATTGGATGGTTACTATTTTGCTTATCATTCTGTTCATCGGTACATCCACTAAAGCTTTAGTCAAAGGCATCGATACATGGAAAAAGGAAACAATTATGAAAAAGGAAGCCTTTGAGGAAGCAGCCCAAATGTTGGAATCAGGTTCTACTCCTGATTATGCTTCTGAAGAAGACTACAAGTCACTACCAGCTGATCTACAAGATGAAGAGGTCCCTTTACTTGACAACATTCACTGGAAGGAGTTATCAGTTCTTATGTATGTTTGGGTGGCTTTTCTCATTGTTCAAATTCTTAAGACTTACAGCAAAACTTGTTCCATAGAGTATTGGCTTCTTAATTCCTTGCAGGTGCCTATTGCAATTTCTGTTACACTTTTTGAAGCCATATGCTTATGCAAAGGAACTAGAGTAATTGCATCAAGGGGAAAGGAAATCACTTGGAAGTTTCATAAGATCTGTCTTTACTGCTTCTGTGGAATAATAGCTGGTATGGTTAGTGGTTTGCTTGGTCTAGGAGGTGGCTTCATTTTGGGACCATTGTTTTTGGAATTGGGAATTCCTCCTCAGGTTGCTAGTGCTACATCAACTTTTGCTATGGTTTTCTCTTCCTCCATGTCAGTGGTACAATATTATCATCTAGATCGCTTCCCAGTACCCTATGCTTCATACTTAGTATTGATTGCAACCATAGCTGCATTAACCGGCCAACATGTGGTGAGAAAGATAATTGCTATCTTTGGTAGAGCATCTATCATCGTCTTCATATTAGCTTTTACCATTTTTGTGAGCGCAATCAGTTTAGGTGGGGTGGGAATAGGCAACATGGTTGAGAAGATGGAAAATGAAGAATATATGGGGTTTGACAATCTCTGCCACCATGGAAAAAAATTTGGGGTTTGA

Protein sequence

>Msa1203000

MAFEVQKKAISREASTIIWLVSWSLIMIYHVSLAERVLEDEKPEIVVMKKRSFFWYSGESSYERVWPEMKFGWRIVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTALSKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVIFADWMVTILLIILFIGTSTKALVKGIDTWKKETIMKKEAFEEAAQMLESGSTPDYASEEDYKSLPADLQDEEVPLLDNIHWKELSVLMYVWVAFLIVQILKTYSKTCSIEYWLLNSLQVPIAISVTLFEAICLCKGTRVIASRGKEITWKFHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLDRFPVPYASYLVLIATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAISLGGVGIGNMVEKMENEEYMGFDNLCHHGKKFGV*