Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443840 | sp|Q8L7A0|TAUE3_ARATH | 59.701 | 469 | 168 | 6 | 15 | 468 | 13 | 475 | 4.78e-178 | 510 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443840 | G7LEU1 | 97.886 | 473 | 10 | 0 | 1 | 473 | 1 | 473 | 0.0 | 944 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036960 | Msa1443840 | 0.830873 | 2.298074e-55 | -8.615850e-47 |
| Msa0044100 | Msa1443840 | 0.847282 | 1.276495e-59 | -8.615850e-47 |
| Msa0095540 | Msa1443840 | 0.807024 | 6.185983e-50 | -8.615850e-47 |
| Msa1369700 | Msa1443840 | 0.848395 | 6.299786e-60 | -8.615850e-47 |
| Msa1395870 | Msa1443840 | 0.852713 | 3.853963e-61 | -8.615850e-47 |
| Msa1397250 | Msa1443840 | 0.821927 | 3.111820e-53 | -8.615850e-47 |
| Msa1399560 | Msa1443840 | 0.879557 | 1.130821e-69 | -8.615850e-47 |
| Msa1401150 | Msa1443840 | 0.825789 | 3.870085e-54 | -8.615850e-47 |
| Msa1437190 | Msa1443840 | 0.863046 | 3.292706e-64 | -8.615850e-47 |
| Msa1440340 | Msa1443840 | 0.808269 | 3.364688e-50 | -8.615850e-47 |
| Msa1443840 | Msa1452060 | 0.848052 | 7.835840e-60 | -8.615850e-47 |
| Msa1443840 | Msa1460380 | 0.862388 | 5.250665e-64 | -8.615850e-47 |
| Msa0611380 | Msa1443840 | 0.883326 | 4.931763e-71 | -8.615850e-47 |
| Msa0618180 | Msa1443840 | 0.841602 | 4.301703e-58 | -8.615850e-47 |
| Msa0618220 | Msa1443840 | 0.823316 | 1.479032e-53 | -8.615850e-47 |
| Msa0618290 | Msa1443840 | 0.821184 | 4.619911e-53 | -8.615850e-47 |
| Msa0619990 | Msa1443840 | 0.831715 | 1.426185e-55 | -8.615850e-47 |
| Msa0628640 | Msa1443840 | 0.866941 | 1.972215e-65 | -8.615850e-47 |
| Msa0631120 | Msa1443840 | 0.882032 | 1.463599e-70 | -8.615850e-47 |
| Msa0666030 | Msa1443840 | 0.867258 | 1.562263e-65 | -8.615850e-47 |
| Msa0669340 | Msa1443840 | 0.863059 | 3.261812e-64 | -8.615850e-47 |
| Msa0701970 | Msa1443840 | 0.820517 | 6.579654e-53 | -8.615850e-47 |
| Msa0706420 | Msa1443840 | 0.808666 | 2.768495e-50 | -8.615850e-47 |
| Msa0716450 | Msa1443840 | 0.883812 | 3.268705e-71 | -8.615850e-47 |
| Msa0717260 | Msa1443840 | 0.885890 | 5.504028e-72 | -8.615850e-47 |
| Msa0734230 | Msa1443840 | 0.824057 | 9.917902e-54 | -8.615850e-47 |
| Msa0758320 | Msa1443840 | 0.880373 | 5.788952e-70 | -8.615850e-47 |
| Msa0775440 | Msa1443840 | 0.849391 | 3.333198e-60 | -8.615850e-47 |
| Msa0799030 | Msa1443840 | 0.878279 | 3.194721e-69 | -8.615850e-47 |
| Msa0799700 | Msa1443840 | 0.843557 | 1.302262e-58 | -8.615850e-47 |
| Msa0812820 | Msa1443840 | 0.834723 | 2.541314e-56 | -8.615850e-47 |
| Msa0837440 | Msa1443840 | 0.855301 | 6.915947e-62 | -8.615850e-47 |
| Msa0837980 | Msa1443840 | 0.884831 | 1.369744e-71 | -8.615850e-47 |
| Msa0141100 | Msa1443840 | 0.883283 | 5.117267e-71 | -8.615850e-47 |
| Msa0183750 | Msa1443840 | 0.859304 | 4.536320e-63 | -8.615850e-47 |
| Msa0191040 | Msa1443840 | 0.840617 | 7.808267e-58 | -8.615850e-47 |
| Msa0220300 | Msa1443840 | 0.850163 | 2.027859e-60 | -8.615850e-47 |
| Msa0225600 | Msa1443840 | 0.804017 | 2.642752e-49 | -8.615850e-47 |
| Msa0233340 | Msa1443840 | 0.840748 | 7.215207e-58 | -8.615850e-47 |
| Msa1227950 | Msa1443840 | 0.849220 | 3.719030e-60 | -8.615850e-47 |
| Msa1227970 | Msa1443840 | 0.853785 | 1.899623e-61 | -8.615850e-47 |
| Msa1228210 | Msa1443840 | 0.800390 | 1.473854e-48 | -8.615850e-47 |
| Msa1254700 | Msa1443840 | 0.826337 | 2.867200e-54 | -8.615850e-47 |
| Msa1255280 | Msa1443840 | 0.933479 | 1.761552e-95 | -8.615850e-47 |
| Msa1258050 | Msa1443840 | 0.861925 | 7.282010e-64 | -8.615850e-47 |
| Msa1266960 | Msa1443840 | 0.882950 | 6.776022e-71 | -8.615850e-47 |
| Msa1291870 | Msa1443840 | 0.805818 | 1.110688e-49 | -8.615850e-47 |
| Msa1308130 | Msa1443840 | 0.842112 | 3.154024e-58 | -8.615850e-47 |
| Msa1339940 | Msa1443840 | 0.852850 | 3.520637e-61 | -8.615850e-47 |
| Msa0374850 | Msa1443840 | 0.877720 | 5.012270e-69 | -8.615850e-47 |
| Msa0375090 | Msa1443840 | 0.866604 | 2.524448e-65 | -8.615850e-47 |
| Msa0385670 | Msa1443840 | 0.840612 | 7.830540e-58 | -8.615850e-47 |
| Msa0435670 | Msa1443840 | 0.829420 | 5.200740e-55 | -8.615850e-47 |
| Msa0470340 | Msa1443840 | 0.862028 | 6.771989e-64 | -8.615850e-47 |
| Msa0470860 | Msa1443840 | 0.864937 | 8.485723e-65 | -8.615850e-47 |
| Msa0479680 | Msa1443840 | 0.817208 | 3.714957e-52 | -8.615850e-47 |
| Msa0479700 | Msa1443840 | 0.811238 | 7.734989e-51 | -8.615850e-47 |
| Msa0480950 | Msa1443840 | 0.872673 | 2.654627e-67 | -8.615850e-47 |
| Msa0481110 | Msa1443840 | 0.814528 | 1.471235e-51 | -8.615850e-47 |
| Msa0981010 | Msa1443840 | 0.811828 | 5.759646e-51 | -8.615850e-47 |
| Msa1002620 | Msa1443840 | 0.865813 | 4.496753e-65 | -8.615850e-47 |
| Msa1033560 | Msa1443840 | 0.822594 | 2.179084e-53 | -8.615850e-47 |
| Msa1069100 | Msa1443840 | 0.801029 | 1.091917e-48 | -8.615850e-47 |
| Msa0251240 | Msa1443840 | 0.826328 | 2.882244e-54 | -8.615850e-47 |
| Msa0266450 | Msa1443840 | 0.812197 | 4.784896e-51 | -8.615850e-47 |
| Msa0288190 | Msa1443840 | 0.808111 | 3.637091e-50 | -8.615850e-47 |
| Msa0288200 | Msa1443840 | 0.803694 | 3.085103e-49 | -8.615850e-47 |
| Msa0311690 | Msa1443840 | 0.833274 | 5.860970e-56 | -8.615850e-47 |
| Msa0315250 | Msa1443840 | 0.829323 | 5.490531e-55 | -8.615850e-47 |
| Msa0326540 | Msa1443840 | 0.807047 | 6.115776e-50 | -8.615850e-47 |
| Msa0334500 | Msa1443840 | 0.807363 | 5.243362e-50 | -8.615850e-47 |
| Msa1113850 | Msa1443840 | 0.840738 | 7.255535e-58 | -8.615850e-47 |
| Msa1160400 | Msa1443840 | 0.833156 | 6.268696e-56 | -8.615850e-47 |
| Msa1172670 | Msa1443840 | 0.800717 | 1.264475e-48 | -8.615850e-47 |
| Msa1190120 | Msa1443840 | 0.865702 | 4.875303e-65 | -8.615850e-47 |
| Msa1197590 | Msa1443840 | 0.823397 | 1.416241e-53 | -8.615850e-47 |
| Msa1203000 | Msa1443840 | 0.965151 | 3.108488e-124 | -8.615850e-47 |
| Msa1205960 | Msa1443840 | 0.801031 | 1.090615e-48 | -8.615850e-47 |
| Msa1211550 | Msa1443840 | 0.859623 | 3.639356e-63 | -8.615850e-47 |
| Msa1217940 | Msa1443840 | 0.822684 | 2.076875e-53 | -8.615850e-47 |
| Msa1218480 | Msa1443840 | 0.801197 | 1.008585e-48 | -8.615850e-47 |
| Msa1219260 | Msa1443840 | 0.878477 | 2.721595e-69 | -8.615850e-47 |
| Msa0503580 | Msa1443840 | 0.803489 | 3.402443e-49 | -8.615850e-47 |
| Msa0531430 | Msa1443840 | 0.888265 | 6.884256e-73 | -8.615850e-47 |
| Msa0534570 | Msa1443840 | 0.819963 | 8.810283e-53 | -8.615850e-47 |
| Msa0534590 | Msa1443840 | 0.880652 | 4.600255e-70 | -8.615850e-47 |
| Msa0565600 | Msa1443840 | 0.837943 | 3.856976e-57 | -8.615850e-47 |
| Msa0590800 | Msa1443840 | 0.854363 | 1.293588e-61 | -8.615850e-47 |
| Msa0853320 | Msa1443840 | 0.858547 | 7.645967e-63 | -8.615850e-47 |
| Msa0880710 | Msa1443840 | 0.801855 | 7.395728e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443840 | MtrunA17_Chr8g0373471 | 97.886 | 473 | 10 | 0 | 1 | 473 | 1 | 473 | 0.0 | 944 |
| Msa1443840 | MtrunA17_Chr5g0403901 | 73.536 | 461 | 102 | 4 | 19 | 467 | 18 | 470 | 0.0 | 592 |
| Msa1443840 | MtrunA17_Chr3g0139541 | 64.637 | 427 | 134 | 5 | 49 | 468 | 53 | 469 | 0.0 | 516 |
| Msa1443840 | MtrunA17_Chr8g0380211 | 62.319 | 414 | 151 | 3 | 62 | 470 | 67 | 480 | 1.35e-156 | 453 |
| Msa1443840 | MtrunA17_Chr1g0157751 | 50.547 | 457 | 210 | 5 | 20 | 466 | 6 | 456 | 3.32e-144 | 420 |
| Msa1443840 | MtrunA17_Chr7g0265481 | 51.816 | 413 | 185 | 3 | 63 | 465 | 51 | 459 | 1.62e-125 | 373 |
| Msa1443840 | MtrunA17_Chr8g0380191 | 57.349 | 347 | 107 | 3 | 122 | 467 | 10 | 316 | 2.11e-124 | 365 |
| Msa1443840 | MtrunA17_Chr1g0179621 | 47.484 | 457 | 229 | 4 | 17 | 465 | 9 | 462 | 3.87e-120 | 359 |
| Msa1443840 | MtrunA17_Chr2g0280401 | 28.982 | 383 | 252 | 7 | 100 | 465 | 87 | 466 | 3.17e-42 | 155 |
| Msa1443840 | MtrunA17_Chr3g0139621 | 47.458 | 118 | 39 | 2 | 301 | 395 | 27 | 144 | 3.03e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443840 | AT2G25737.1 | 59.701 | 469 | 168 | 6 | 15 | 468 | 13 | 475 | 4.86e-179 | 510 |
| Msa1443840 | AT2G25737.2 | 60.923 | 325 | 113 | 4 | 48 | 364 | 53 | 371 | 1.40e-122 | 362 |
| Msa1443840 | AT2G36630.1 | 47.962 | 417 | 207 | 3 | 57 | 465 | 42 | 456 | 3.90e-118 | 354 |
| Msa1443840 | AT1G11540.2 | 32.029 | 409 | 245 | 7 | 76 | 465 | 56 | 450 | 2.20e-46 | 167 |
| Msa1443840 | AT1G11540.1 | 31.496 | 381 | 228 | 7 | 104 | 465 | 1 | 367 | 1.37e-45 | 163 |
| Msa1443840 | AT1G61740.1 | 30.000 | 420 | 261 | 7 | 67 | 465 | 51 | 458 | 1.57e-44 | 162 |
| Msa1443840 | AT4G21250.1 | 31.690 | 426 | 236 | 9 | 68 | 465 | 51 | 449 | 7.77e-39 | 146 |
| Msa1443840 | AT4G21260.1 | 27.500 | 400 | 227 | 10 | 68 | 465 | 55 | 393 | 9.58e-29 | 117 |
Find 117 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGGAGGTGGCTTCATTT+TGG | 0.204042 | tig0030547:-19243 | Msa1443840:CDS |
| TTCAAAATGCTGGTTATTCT+AGG | 0.226848 | tig0030547:+24260 | None:intergenic |
| GATGGAAAATGAAGAATATA+TGG | 0.247767 | tig0030547:-18403 | Msa1443840:CDS |
| TATCAGTTCTTATGTATGTT+TGG | 0.264788 | tig0030547:-21991 | Msa1443840:CDS |
| AAAGGAAACAATTATGAAAA+AGG | 0.272024 | tig0030547:-22524 | Msa1443840:intron |
| ATCAGTTCTTATGTATGTTT+GGG | 0.291680 | tig0030547:-21990 | Msa1443840:CDS |
| CCTATGCTTACTTTGATCAT+TGG | 0.307184 | tig0030547:-23734 | Msa1443840:CDS |
| ATATATTGCACTTCAAACTA+TGG | 0.315520 | tig0030547:+18099 | None:intergenic |
| GCTATTGCAGGCATGATTAC+AGG | 0.318014 | tig0030547:-23444 | Msa1443840:intron |
| AGAAAGATAATTGCTATCTT+TGG | 0.319840 | tig0030547:-18672 | Msa1443840:CDS |
| AGGCATCGATACATGGAAAA+AGG | 0.325374 | tig0030547:-22542 | Msa1443840:CDS |
| GCCTTTGACTAAAGCTTTAG+TGG | 0.329119 | tig0030547:+22561 | None:intergenic |
| TAAACGGTATGTTACATAAT+TGG | 0.337245 | tig0030547:+18125 | None:intergenic |
| TTGGCTTCTTAATTCCTTGC+AGG | 0.341432 | tig0030547:-21812 | Msa1443840:intron |
| TAGAACCTGATTCCAACATT+TGG | 0.359466 | tig0030547:+22391 | None:intergenic |
| GAGAAGCATCAACAATTATA+TGG | 0.361224 | tig0030547:-24125 | Msa1443840:CDS |
| ATTAAGAAGCCAATACTCTA+TGG | 0.361665 | tig0030547:+21822 | None:intergenic |
| AGTTCCTTTGCATAAGCATA+TGG | 0.364228 | tig0030547:+19370 | None:intergenic |
| TTCGTCTTCCAAAACTCTTT+CGG | 0.369986 | tig0030547:+24059 | None:intergenic |
| TCTCATTGTTCAAATTCTTA+AGG | 0.370958 | tig0030547:-21960 | Msa1443840:intron |
| TAGTTTAGCCGAAAGAGTTT+TGG | 0.383679 | tig0030547:-24067 | Msa1443840:CDS |
| TGTTTCTTACCATAGGGTAC+TGG | 0.386212 | tig0030547:+18856 | None:intergenic |
| ATCACAGGTGGGGTGGGAAT+AGG | 0.390427 | tig0030547:-18441 | Msa1443840:intron |
| AGAACCTGATTCCAACATTT+GGG | 0.395873 | tig0030547:+22392 | None:intergenic |
| GTTGAGCAGGAAATGAAGTT+TGG | 0.401432 | tig0030547:-23845 | Msa1443840:intron |
| TGAACGGTTTGAAACAATAT+AGG | 0.402736 | tig0030547:+24185 | None:intergenic |
| GTTAGTGGTTTGCTTGGTCT+AGG | 0.405722 | tig0030547:-19260 | Msa1443840:CDS |
| AGAAGTTTCTTCTGGTATAG+TGG | 0.415578 | tig0030547:-24009 | Msa1443840:CDS |
| TTTGTGAGCGCAATCAGTTT+AGG | 0.416463 | tig0030547:-18609 | Msa1443840:intron |
| GAGAGGGCTGTAGAAGACTT+TGG | 0.417036 | tig0030547:+23704 | None:intergenic |
| TTAATGTCATATTTGCTGAT+TGG | 0.419755 | tig0030547:-23290 | Msa1443840:CDS |
| TTGGGAAGTGTAGGAGGAGT+AGG | 0.421290 | tig0030547:-23776 | Msa1443840:CDS |
| GAACTTTCAGGAAGCCTTTG+AGG | 0.428813 | tig0030547:-22421 | Msa1443840:intron |
| AGTGTAACAGAAATTGCAAT+AGG | 0.433950 | tig0030547:+19401 | None:intergenic |
| AAACTTGTTCCATAGAGTAT+TGG | 0.436863 | tig0030547:-21831 | Msa1443840:CDS |
| AGTCTTCCTATGAACGTGTT+TGG | 0.439230 | tig0030547:-23984 | Msa1443840:CDS |
| ATAATAGCTGGTATGGTTAG+TGG | 0.442928 | tig0030547:-19275 | Msa1443840:CDS |
| AGGCAACATGGTTGAGAAGA+TGG | 0.444124 | tig0030547:-18421 | Msa1443840:CDS |
| CTTCAAACTATGGTCATAAA+CGG | 0.445809 | tig0030547:+18109 | None:intergenic |
| GTAGGAGGAGTAGGAGGTGG+AGG | 0.451115 | tig0030547:-23767 | Msa1443840:CDS |
| ATGGAAAATGAAGAATATAT+GGG | 0.453528 | tig0030547:-18402 | Msa1443840:CDS |
| CTTTACTTGACAACATTCAC+TGG | 0.454961 | tig0030547:-22021 | Msa1443840:CDS |
| GCAGCCCAAATGTTGGAATC+AGG | 0.455292 | tig0030547:-22396 | Msa1443840:CDS |
| AGCAGGAAATGAAGTTTGGT+TGG | 0.456534 | tig0030547:-23841 | Msa1443840:intron |
| CGATGTTTATAATAAAACTT+GGG | 0.458146 | tig0030547:-24373 | None:intergenic |
| TCGATGTTTATAATAAAACT+TGG | 0.459360 | tig0030547:-24374 | None:intergenic |
| GGCATGATTACAGGAGCAGC+TGG | 0.459374 | tig0030547:-23435 | Msa1443840:CDS |
| GCAACCATAGCTGCATTAAC+CGG | 0.462747 | tig0030547:-18708 | Msa1443840:CDS |
| CACAGGCCAAACACGTTCAT+AGG | 0.464015 | tig0030547:+23978 | None:intergenic |
| CAGTGAATGTTGTCAAGTAA+AGG | 0.464845 | tig0030547:+22022 | None:intergenic |
| GGTTTGCTTGGTCTAGGAGG+TGG | 0.469170 | tig0030547:-19254 | Msa1443840:CDS |
| ATTGTCGTAGGTTCTATTGT+TGG | 0.473965 | tig0030547:-23815 | Msa1443840:CDS |
| TTCCTAGCATTAGCATAGGC+TGG | 0.478501 | tig0030547:+23331 | None:intergenic |
| AGTGAATGTTGTCAAGTAAA+GGG | 0.481684 | tig0030547:+22023 | None:intergenic |
| GGAATTGGGAATTCCTCCTC+AGG | 0.483527 | tig0030547:-19207 | Msa1443840:intron |
| CTGTGGAATAATAGCTGGTA+TGG | 0.485082 | tig0030547:-19282 | Msa1443840:CDS |
| AACTAGAGTAATTGCATCAA+GGG | 0.487063 | tig0030547:-19351 | Msa1443840:CDS |
| TGTTTCAAACCGTTCATACA+TGG | 0.488172 | tig0030547:-24178 | Msa1443840:exon |
| AGTGTAGGAGGAGTAGGAGG+TGG | 0.490550 | tig0030547:-23770 | Msa1443840:CDS |
| TGCTTCTGTGGAATAATAGC+TGG | 0.491856 | tig0030547:-19287 | Msa1443840:CDS |
| TTGGCTATCACAGGTGGGGT+GGG | 0.492087 | tig0030547:-18447 | Msa1443840:intron |
| TTTGGCTATCACAGGTGGGG+TGG | 0.493274 | tig0030547:-18448 | Msa1443840:intron |
| TCTTCATCTTGTAGATCAGC+TGG | 0.493935 | tig0030547:+22144 | None:intergenic |
| CTTTCTCACCACATGTTGGC+CGG | 0.494055 | tig0030547:+18689 | None:intergenic |
| GGTATGGTTAGTGGTTTGCT+TGG | 0.496243 | tig0030547:-19266 | Msa1443840:CDS |
| GGAAGTGTAGGAGGAGTAGG+AGG | 0.499007 | tig0030547:-23773 | Msa1443840:CDS |
| AGTTCTTATGTATGTTTGGG+TGG | 0.502161 | tig0030547:-21987 | Msa1443840:CDS |
| TTGCTTATCATTCTGTTCAT+CGG | 0.504723 | tig0030547:-23255 | Msa1443840:intron |
| GCAAGATCATAATCTATAAG+TGG | 0.507543 | tig0030547:+23363 | None:intergenic |
| GCAGATTGTGTAACAATGAC+TGG | 0.507617 | tig0030547:-18236 | Msa1443840:three_prime_UTR |
| GAACTAGAGTAATTGCATCA+AGG | 0.511872 | tig0030547:-19352 | Msa1443840:CDS |
| ATCTGTCTTTACTGCTTCTG+TGG | 0.513821 | tig0030547:-19299 | Msa1443840:CDS |
| CATTTGGGCTGCTTCCTCAA+AGG | 0.514918 | tig0030547:+22407 | None:intergenic |
| GGAGCAGCATTGGGAAGTGT+AGG | 0.522662 | tig0030547:-23785 | Msa1443840:CDS |
| CAAGGGGAAAGGAAATCACT+TGG | 0.523181 | tig0030547:-19334 | Msa1443840:CDS |
| ATAAGTGGCATGTCTAGTGT+AGG | 0.528419 | tig0030547:+23378 | None:intergenic |
| GTTTCTTACCATAGGGTACT+GGG | 0.530425 | tig0030547:+18857 | None:intergenic |
| TAGTCAAAGGCATCGATACA+TGG | 0.531192 | tig0030547:-22549 | Msa1443840:CDS |
| GATCGCTTCCCAGTACCCTA+TGG | 0.534547 | tig0030547:-18865 | Msa1443840:intron |
| CCAATGATCAAAGTAAGCAT+AGG | 0.543311 | tig0030547:+23734 | None:intergenic |
| GCAGCATTGGGAAGTGTAGG+AGG | 0.544657 | tig0030547:-23782 | Msa1443840:CDS |
| TTTCTCTTCCTCCATGTCAG+TGG | 0.546653 | tig0030547:-18905 | Msa1443840:CDS |
| CTTCAAAAGCCATGTATGAA+CGG | 0.550042 | tig0030547:+24169 | None:intergenic |
| CATTGTACATGAGAATGAGT+AGG | 0.553335 | tig0030547:+18070 | None:intergenic |
| CAATTATATGGCTAGTCTCG+TGG | 0.555789 | tig0030547:-24113 | Msa1443840:CDS |
| CAATGATCAAAGTAAGCATA+GGG | 0.558927 | tig0030547:+23735 | None:intergenic |
| AATATGTAGAAAATTTAGAA+AGG | 0.559766 | tig0030547:+18271 | None:intergenic |
| AGTGGTTTGCTTGGTCTAGG+AGG | 0.560215 | tig0030547:-19257 | Msa1443840:CDS |
| AGCTGATCTACAAGATGAAG+AGG | 0.560678 | tig0030547:-22142 | Msa1443840:intron |
| TGTCATATTTGCTGATTGGA+TGG | 0.563702 | tig0030547:-23286 | Msa1443840:CDS |
| TCCACTAAAGCTTTAGTCAA+AGG | 0.565804 | tig0030547:-22562 | Msa1443840:CDS |
| ATATATAATATTTACCTGCA+AGG | 0.570892 | tig0030547:+21798 | None:intergenic |
| CTAATTCCTAGCATTAGCAT+AGG | 0.571256 | tig0030547:+23327 | None:intergenic |
| TGAGGAAGCAGCCCAAATGT+TGG | 0.572269 | tig0030547:-22403 | Msa1443840:CDS |
| ACTTGACAACATTCACTGGA+AGG | 0.572833 | tig0030547:-22017 | Msa1443840:CDS |
| AGTAATTGCATCAAGGGGAA+AGG | 0.574209 | tig0030547:-19345 | Msa1443840:CDS |
| TGCATTAACCGGCCAACATG+TGG | 0.574265 | tig0030547:-18697 | Msa1443840:CDS |
| TAAGTGGCATGTCTAGTGTA+GGG | 0.577620 | tig0030547:+23379 | None:intergenic |
| GATGTTTATAATAAAACTTG+GGG | 0.579977 | tig0030547:-24372 | None:intergenic |
| GAAGCCATATGCTTATGCAA+AGG | 0.580245 | tig0030547:-19374 | Msa1443840:CDS |
| TTGGCCGGTTAATGCAGCTA+TGG | 0.591965 | tig0030547:+18704 | None:intergenic |
| CAACAGTGTATTACAATCTG+AGG | 0.597031 | tig0030547:-23410 | Msa1443840:CDS |
| TTTGGTTGGAGAATTGTCGT+AGG | 0.615183 | tig0030547:-23827 | Msa1443840:CDS |
| TGGAAAATGAAGAATATATG+GGG | 0.615202 | tig0030547:-18401 | Msa1443840:CDS |
| AATATACTAACACTTAGAGA+GGG | 0.620159 | tig0030547:+23688 | None:intergenic |
| TTATCTTTCTCACCACATGT+TGG | 0.621904 | tig0030547:+18685 | None:intergenic |
| GAATGAGTTTGTACCTGAGG+AGG | 0.622331 | tig0030547:+19194 | None:intergenic |
| AAATATACTAACACTTAGAG+AGG | 0.625688 | tig0030547:+23687 | None:intergenic |
| ATAATATTGTACCACTGACA+TGG | 0.629151 | tig0030547:+18894 | None:intergenic |
| TTCCAGCCTATGCTAATGCT+AGG | 0.630800 | tig0030547:-23333 | Msa1443840:CDS |
| CTAATGCTAGGAATTAGCAT+TGG | 0.634658 | tig0030547:-23321 | Msa1443840:CDS |
| ACTAGAGTAATTGCATCAAG+GGG | 0.654446 | tig0030547:-19350 | Msa1443840:CDS |
| TTTGACAATCTCTGCCACCA+TGG | 0.655124 | tig0030547:-18378 | Msa1443840:CDS |
| TGGGGTGGGAATAGGCAACA+TGG | 0.656926 | tig0030547:-18433 | Msa1443840:CDS |
| GCATGATTACAGGAGCAGCT+GGG | 0.658797 | tig0030547:-23434 | Msa1443840:CDS |
| ATGTTTATAATAAAACTTGG+GGG | 0.685267 | tig0030547:-24371 | None:intergenic |
| ATATTGTACCACTGACATGG+AGG | 0.737557 | tig0030547:+18897 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAAATAAATTTTTTTT+CGG | + | tig0030547:21831-21850 | None:intergenic | 0.0% |
| !!! | AAAATTTTATTTTAATATTT+CGG | - | tig0030547:21871-21890 | Msa1443840:intron | 0.0% |
| !!! | AAATTTATAATTTATTTTTT+CGG | - | tig0030547:21944-21963 | Msa1443840:intron | 0.0% |
| !!! | AAAAAATTTTAAAATTTTTT+TGG | - | tig0030547:21981-22000 | Msa1443840:CDS | 0.0% |
| !!! | AAAAATTTTAAAATTTTTTT+GGG | - | tig0030547:21982-22001 | Msa1443840:CDS | 0.0% |
| !!! | TTTTTGTTTTTTTTGTTTTT+TGG | + | tig0030547:18207-18226 | None:intergenic | 10.0% |
| !!! | ATAGATTCATATATATATTT+TGG | - | tig0030547:19282-19301 | Msa1443840:CDS | 10.0% |
| !! | AGGTAAATATTATATATATT+TGG | - | tig0030547:20635-20654 | Msa1443840:intron | 10.0% |
| !!! | AATTTTTTTTTGTTTGAAAA+TGG | - | tig0030547:21281-21300 | Msa1443840:intron | 10.0% |
| !!! | AAATTTATTTTCAGATTTTT+CGG | + | tig0030547:22482-22501 | None:intergenic | 10.0% |
| !! | TCGAAAATTTAAAAATATTT+CGG | + | tig0030547:22129-22148 | None:intergenic | 10.0% |
| !!! | ATTTTTTTAAAATAATCATG+CGG | - | tig0030547:22157-22176 | Msa1443840:CDS | 10.0% |
| !!! | AAATTTATTTTCAGATTTTT+TGG | - | tig0030547:22482-22501 | Msa1443840:intron | 10.0% |
| !!! | TATAATTTTCAGATTTTTTT+CGG | - | tig0030547:22513-22532 | Msa1443840:intron | 10.0% |
| !!! | AAATTTATTTTCAGATTTTT+CGG | - | tig0030547:22482-22501 | Msa1443840:intron | 10.0% |
| !!! | TATAATTTTCAGAATTTTTT+CGG | - | tig0030547:22585-22604 | Msa1443840:intron | 10.0% |
| !!! | AATTTTTTTTTGTTTGAAAA+TGG | + | tig0030547:21281-21300 | None:intergenic | 10.0% |
| !!! | AAAAACCATAAATTTTTTTA+AGG | + | tig0030547:22912-22931 | None:intergenic | 10.0% |
| !! | ATAGTTCTTAATTTAACATT+TGG | - | tig0030547:20167-20186 | Msa1443840:intron | 15.0% |
| !!! | TAATTTATAACTTGCTTTTT+TGG | - | tig0030547:21043-21062 | Msa1443840:intron | 15.0% |
| !! | TGAATTAAATCCTTAAAAAA+AGG | - | tig0030547:21173-21192 | Msa1443840:intron | 15.0% |
| !!! | TTCAAACTTTTTTTTTTACA+GGG | + | tig0030547:22837-22856 | None:intergenic | 15.0% |
| !!! | ATTCAAACTTTTTTTTTTAC+AGG | + | tig0030547:22836-22855 | None:intergenic | 15.0% |
| !! | CAAACAAAAAAAAATTTACA+GGG | + | tig0030547:22808-22827 | None:intergenic | 15.0% |
| !! | TCAAACAAAAAAAAATTTAC+AGG | + | tig0030547:22807-22826 | None:intergenic | 15.0% |
| !!! | ATGACAATTTTTACTTTAAA+AGG | + | tig0030547:22315-22334 | None:intergenic | 15.0% |
| !! | CAAACAAAAAAAAATTTACA+TGG | - | tig0030547:22808-22827 | Msa1443840:intron | 15.0% |
| !!! | ATTCAAACTTTTTTTTTTAC+AGG | - | tig0030547:22836-22855 | Msa1443840:intron | 15.0% |
| !!! | TTCAAACTTTTTTTTTTACA+GGG | - | tig0030547:22837-22856 | Msa1443840:intron | 15.0% |
| !! | TTAAGCCTTAAAAAAATTTA+TGG | - | tig0030547:22904-22923 | Msa1443840:intron | 15.0% |
| !! | TATCTTAAAAAAAACTGAAA+GGG | + | tig0030547:23439-23458 | None:intergenic | 15.0% |
| !! | ATATCTTAAAAAAAACTGAA+AGG | + | tig0030547:23440-23459 | None:intergenic | 15.0% |
| !! | TTAAACTTTCTATCATAAAT+GGG | + | tig0030547:23901-23920 | None:intergenic | 15.0% |
| !!! | TAAATTTTATCCTTACTTTA+TGG | + | tig0030547:23924-23943 | None:intergenic | 15.0% |
| !!! | AGTAAGGATAAAATTTATTT+TGG | - | tig0030547:23927-23946 | Msa1443840:intron | 15.0% |
| !! | AATATGTAGAAAATTTAGAA+AGG | + | tig0030547:24159-24178 | None:intergenic | 15.0% |
| !!! | ACATAAAAACAATTTTAAGA+TGG | + | tig0030547:24230-24249 | None:intergenic | 15.0% |
| !!! | GATACTTTATGTTATGTTTT+TGG | - | tig0030547:18489-18508 | Msa1443840:intron | 20.0% |
| !! | TCATGTCAATATTATAAATG+AGG | + | tig0030547:18525-18544 | None:intergenic | 20.0% |
| !! | TTATATATATAGTCGATGTT+TGG | - | tig0030547:18787-18806 | Msa1443840:intron | 20.0% |
| !!! | TATGTATTGGTATGTTTATT+TGG | + | tig0030547:18940-18959 | None:intergenic | 20.0% |
| !!! | TTATTGTATTTTTTCCGAAT+TGG | - | tig0030547:19382-19401 | Msa1443840:CDS | 20.0% |
| !!! | TATTGTATTTTTTCCGAATT+GGG | - | tig0030547:19383-19402 | Msa1443840:CDS | 20.0% |
| !! | GTTCTTGAAAAAATTGAATT+TGG | + | tig0030547:19808-19827 | None:intergenic | 20.0% |
| !! | AAAGGAAACAATTATGAAAA+AGG | - | tig0030547:19903-19922 | Msa1443840:intron | 20.0% |
| !! | TTAATTAACACAAATAAGAG+AGG | - | tig0030547:20143-20162 | Msa1443840:intron | 20.0% |
| !! | TTCTTAAGGTAGTTAATATT+TGG | - | tig0030547:20481-20500 | Msa1443840:intron | 20.0% |
| !! | ATATATAATATTTACCTGCA+AGG | + | tig0030547:20632-20651 | None:intergenic | 20.0% |
| !!! | TACTACTATATCACAATTTT+TGG | + | tig0030547:20747-20766 | None:intergenic | 20.0% |
| !! | TGATATAGTAGTATACATAA+AGG | - | tig0030547:20754-20773 | Msa1443840:intron | 20.0% |
| !!! | AATTAATTGTGATTTGTTGA+CGG | + | tig0030547:20852-20871 | None:intergenic | 20.0% |
| !! | TTAATAAGAGAAATGTTAAC+CGG | - | tig0030547:20910-20929 | Msa1443840:intron | 20.0% |
| !!! | CCTTTTTTAGTATTCTTAAT+CGG | + | tig0030547:20948-20967 | None:intergenic | 20.0% |
| !!! | CATATTTAAGCCTTTTTTTA+AGG | + | tig0030547:21186-21205 | None:intergenic | 20.0% |
| !! | AGTTAATTAAACAAGTAGAA+GGG | + | tig0030547:22262-22281 | None:intergenic | 20.0% |
| !! | TGTTTAATTAACTGAATATG+CGG | - | tig0030547:22269-22288 | Msa1443840:intron | 20.0% |
| !! | ACTAAAATACATATCTTGAT+TGG | - | tig0030547:22934-22953 | Msa1443840:intron | 20.0% |
| !!! | TTGATGAATATTTTTGAATG+TGG | - | tig0030547:23464-23483 | Msa1443840:intron | 20.0% |
| !!! | ATATATTGTTTCTTACCATA+GGG | + | tig0030547:23580-23599 | None:intergenic | 20.0% |
| !!! | TATATATTGTTTCTTACCAT+AGG | + | tig0030547:23581-23600 | None:intergenic | 20.0% |
| !! | GTTAAACTTTCTATCATAAA+TGG | + | tig0030547:23902-23921 | None:intergenic | 20.0% |
| !! | ATGGAAAATGAAGAATATAT+GGG | - | tig0030547:24025-24044 | Msa1443840:CDS | 20.0% |
| !!! | TGTTTTTATGTGTTTTTGTT+TGG | - | tig0030547:24239-24258 | Msa1443840:five_prime_UTR | 20.0% |
| !! | TTTTTCATGACAACAATTTC+TGG | + | tig0030547:18397-18416 | None:intergenic | 25.0% |
| ! | TGAAAAAAAGAAGTTTCTTC+TGG | - | tig0030547:18410-18429 | Msa1443840:CDS | 25.0% |
| ! | AAAATGTTTGATAAACTCAC+AGG | + | tig0030547:18469-18488 | None:intergenic | 25.0% |
| ! | TTGACATGATGTTATGAAAT+TGG | - | tig0030547:18536-18555 | Msa1443840:intron | 25.0% |
| ! | AATATACTAACACTTAGAGA+GGG | + | tig0030547:18742-18761 | None:intergenic | 25.0% |
| ! | AAATATACTAACACTTAGAG+AGG | + | tig0030547:18743-18762 | None:intergenic | 25.0% |
| ! | CAGAAAGAATACATATGTAT+TGG | + | tig0030547:18953-18972 | None:intergenic | 25.0% |
| !! | TTAATGTCATATTTGCTGAT+TGG | - | tig0030547:19137-19156 | Msa1443840:intron | 25.0% |
| ! | AATAACCAAATGCAATATGT+TGG | + | tig0030547:19367-19386 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | tig0030547:19615-19634 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | tig0030547:19628-19647 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | tig0030547:19627-19646 | Msa1443840:intron | 25.0% |
| ! | TACTCTTACTATAAAGTAGA+AGG | + | tig0030547:19976-19995 | None:intergenic | 25.0% |
| ! | TATCAGTTCTTATGTATGTT+TGG | - | tig0030547:20436-20455 | Msa1443840:intron | 25.0% |
| ! | ATCAGTTCTTATGTATGTTT+GGG | - | tig0030547:20437-20456 | Msa1443840:intron | 25.0% |
| ! | TCTCATTGTTCAAATTCTTA+AGG | - | tig0030547:20467-20486 | Msa1443840:intron | 25.0% |
| ! | AGTTGTATAACTTCATAGAT+TGG | - | tig0030547:20696-20715 | Msa1443840:intron | 25.0% |
| !!! | ACAATTTTTGGTCTTTTAAC+AGG | + | tig0030547:20735-20754 | None:intergenic | 25.0% |
| ! | TAATACAAATGTTCCTATGT+AGG | + | tig0030547:20785-20804 | None:intergenic | 25.0% |
| !!! | GGTGTAAATTTTTTTACATC+AGG | + | tig0030547:20831-20850 | None:intergenic | 25.0% |
| ! | CCGATTAAGAATACTAAAAA+AGG | - | tig0030547:20945-20964 | Msa1443840:intron | 25.0% |
| !! | TTTAAAATAATCATGCGGTA+AGG | - | tig0030547:22162-22181 | Msa1443840:CDS | 25.0% |
| ! | CAACATTAAGAAAGACTAAT+GGG | - | tig0030547:22187-22206 | Msa1443840:intron | 25.0% |
| ! | AACATTAAGAAAGACTAATG+GGG | - | tig0030547:22188-22207 | Msa1443840:intron | 25.0% |
| ! | TTAATTAAACAAGTAGAAGG+GGG | + | tig0030547:22260-22279 | None:intergenic | 25.0% |
| ! | GTTAATTAAACAAGTAGAAG+GGG | + | tig0030547:22261-22280 | None:intergenic | 25.0% |
| ! | CAGTTAATTAAACAAGTAGA+AGG | + | tig0030547:22263-22282 | None:intergenic | 25.0% |
| ! | GTTTAATTAACTGAATATGC+GGG | - | tig0030547:22270-22289 | Msa1443840:intron | 25.0% |
| ! | TTTAATTAACTGAATATGCG+GGG | - | tig0030547:22271-22290 | Msa1443840:intron | 25.0% |
| !!! | CATAAAACTATTTCTATGCA+AGG | - | tig0030547:22963-22982 | Msa1443840:intron | 25.0% |
| !!! | GTGTGCTATTTATCAATTTA+AGG | - | tig0030547:23001-23020 | Msa1443840:intron | 25.0% |
| ! | CTCAATCGAATATATTAATG+AGG | - | tig0030547:23304-23323 | Msa1443840:CDS | 25.0% |
| !!! | ATTATTTTACAACTGTTTCG+AGG | + | tig0030547:23387-23406 | None:intergenic | 25.0% |
| !!! | TGAATATTTTTGAATGTGGT+AGG | - | tig0030547:23468-23487 | Msa1443840:intron | 25.0% |
| ! | GAATGTAGATATGATGATAT+TGG | - | tig0030547:23604-23623 | Msa1443840:intron | 25.0% |
| ! | AGAAAGATAATTGCTATCTT+TGG | - | tig0030547:23755-23774 | Msa1443840:CDS | 25.0% |
| ! | GAAAGTTTAACCATAAAGTA+AGG | - | tig0030547:23911-23930 | Msa1443840:intron | 25.0% |
| !! | TAGTAACAATGTCTCATTTT+TGG | - | tig0030547:23961-23980 | Msa1443840:intron | 25.0% |
| ! | GATGGAAAATGAAGAATATA+TGG | - | tig0030547:24024-24043 | Msa1443840:CDS | 25.0% |
| ! | TGGAAAATGAAGAATATATG+GGG | - | tig0030547:24026-24045 | Msa1443840:CDS | 25.0% |
| ! | TAAACGGTATGTTACATAAT+TGG | + | tig0030547:24305-24324 | None:intergenic | 25.0% |
| ! | ATATATTGCACTTCAAACTA+TGG | + | tig0030547:24331-24350 | None:intergenic | 25.0% |
| ! | TTCAAAATGCTGGTTATTCT+AGG | + | tig0030547:18170-18189 | None:intergenic | 30.0% |
| !!! | CTACTACTTTTTCAAAATGC+TGG | + | tig0030547:18180-18199 | None:intergenic | 30.0% |
| ! | TGAACGGTTTGAAACAATAT+AGG | + | tig0030547:18245-18264 | None:intergenic | 30.0% |
| !! | GAGAAGCATCAACAATTATA+TGG | - | tig0030547:18302-18321 | Msa1443840:three_prime_UTR | 30.0% |
| !!! | GGTTCTATTGTTGGATTTTT+TGG | - | tig0030547:18621-18640 | Msa1443840:CDS | 30.0% |
| CAATGATCAAAGTAAGCATA+GGG | + | tig0030547:18695-18714 | None:intergenic | 30.0% | |
| ! | TGATTTCTTATTGCTATTGC+AGG | - | tig0030547:18971-18990 | Msa1443840:intron | 30.0% |
| GCAAGATCATAATCTATAAG+TGG | + | tig0030547:19067-19086 | None:intergenic | 30.0% | |
| TTGCTTATCATTCTGTTCAT+CGG | - | tig0030547:19172-19191 | Msa1443840:intron | 30.0% | |
| TGTTTAGCATAATTGCTCTT+GGG | - | tig0030547:19209-19228 | Msa1443840:CDS | 30.0% | |
| !!! | CTCTTCTGTTTGTGTTTTTT+GGG | - | tig0030547:19238-19257 | Msa1443840:CDS | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | tig0030547:19530-19549 | Msa1443840:intron | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | + | tig0030547:19602-19621 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | tig0030547:19653-19672 | Msa1443840:intron | 30.0% | |
| AAATCTAGACAGTTTGATGT+CGG | - | tig0030547:19722-19741 | Msa1443840:intron | 30.0% | |
| TGTAATAACTGGAAGTTTGT+AGG | + | tig0030547:20078-20097 | None:intergenic | 30.0% | |
| TTCCAGTTATTACATGTAGA+TGG | - | tig0030547:20084-20103 | Msa1443840:intron | 30.0% | |
| !! | TTCAGAAGCATCTGATATAA+GGG | + | tig0030547:20245-20264 | None:intergenic | 30.0% |
| TGAAGAGGTAATTATTTCCA+AGG | - | tig0030547:20300-20319 | Msa1443840:intron | 30.0% | |
| GAAGAGGTAATTATTTCCAA+GGG | - | tig0030547:20301-20320 | Msa1443840:intron | 30.0% | |
| ACTCTCTATAAAGAATGATC+TGG | + | tig0030547:20331-20350 | None:intergenic | 30.0% | |
| TCTTTATAGAGAGTTCATTG+AGG | - | tig0030547:20337-20356 | Msa1443840:intron | 30.0% | |
| TATGTTAAATTCTTGTGTGC+AGG | - | tig0030547:20380-20399 | Msa1443840:intron | 30.0% | |
| AGTGAATGTTGTCAAGTAAA+GGG | + | tig0030547:20407-20426 | None:intergenic | 30.0% | |
| ! | AAACTTGTTCCATAGAGTAT+TGG | - | tig0030547:20596-20615 | Msa1443840:intron | 30.0% |
| ATTAAGAAGCCAATACTCTA+TGG | + | tig0030547:20608-20627 | None:intergenic | 30.0% | |
| CATAAAGGTTTATCCTACAT+AGG | - | tig0030547:20769-20788 | Msa1443840:intron | 30.0% | |
| !! | TAAAAAAGTGTCATGCTAAC+CGG | + | tig0030547:21094-21113 | None:intergenic | 30.0% |
| GCAACATTAAGAAAGACTAA+TGG | - | tig0030547:22186-22205 | Msa1443840:intron | 30.0% | |
| CATATATAGATCAACTTTGC+TGG | - | tig0030547:22363-22382 | Msa1443840:intron | 30.0% | |
| AGTGTAACAGAAATTGCAAT+AGG | + | tig0030547:23029-23048 | None:intergenic | 30.0% | |
| AACTAGAGTAATTGCATCAA+GGG | - | tig0030547:23076-23095 | Msa1443840:intron | 30.0% | |
| ATTCCCAATTCCAAAAACAA+TGG | + | tig0030547:23212-23231 | None:intergenic | 30.0% | |
| CGAATATATTAATGAGGTCT+CGG | - | tig0030547:23310-23329 | Msa1443840:CDS | 30.0% | |
| !! | TGCTACATCAACTTTTTCTA+TGG | - | tig0030547:23498-23517 | Msa1443840:intron | 30.0% |
| ATAATATTGTACCACTGACA+TGG | + | tig0030547:23536-23555 | None:intergenic | 30.0% | |
| AACTTTCTATCATAAATGGG+TGG | + | tig0030547:23898-23917 | None:intergenic | 30.0% | |
| !!! | AAACCCCAAATTTTTTTCCA+TGG | + | tig0030547:24069-24088 | None:intergenic | 30.0% |
| CTTCAAACTATGGTCATAAA+CGG | + | tig0030547:24321-24340 | None:intergenic | 30.0% | |
| TGTTTCAAACCGTTCATACA+TGG | - | tig0030547:18249-18268 | Msa1443840:three_prime_UTR | 35.0% | |
| CTTCAAAAGCCATGTATGAA+CGG | + | tig0030547:18261-18280 | None:intergenic | 35.0% | |
| !!! | GGCTTTTGAAGTTCAAAAGA+AGG | - | tig0030547:18270-18289 | Msa1443840:three_prime_UTR | 35.0% |
| ! | TAGTTTAGCCGAAAGAGTTT+TGG | - | tig0030547:18360-18379 | Msa1443840:CDS | 35.0% |
| TTCGTCTTCCAAAACTCTTT+CGG | + | tig0030547:18371-18390 | None:intergenic | 35.0% | |
| AGAAGTTTCTTCTGGTATAG+TGG | - | tig0030547:18418-18437 | Msa1443840:CDS | 35.0% | |
| !! | TTGGTGATGATGCATTGTAA+TGG | - | tig0030547:18555-18574 | Msa1443840:intron | 35.0% |
| !!! | TTGTAATGGTTTTGTTGAGC+AGG | - | tig0030547:18569-18588 | Msa1443840:intron | 35.0% |
| ATTGTCGTAGGTTCTATTGT+TGG | - | tig0030547:18612-18631 | Msa1443840:CDS | 35.0% | |
| CCAATGATCAAAGTAAGCAT+AGG | + | tig0030547:18696-18715 | None:intergenic | 35.0% | |
| CCTATGCTTACTTTGATCAT+TGG | - | tig0030547:18693-18712 | Msa1443840:CDS | 35.0% | |
| !!! | TACAGTTTTGGACCTGAAAT+TGG | - | tig0030547:18844-18863 | Msa1443840:intron | 35.0% |
| TTTGTAGCTTCACCAATTTC+AGG | + | tig0030547:18859-18878 | None:intergenic | 35.0% | |
| AAGCTACAAATAGTAGCATG+TGG | - | tig0030547:18869-18888 | Msa1443840:CDS | 35.0% | |
| TACAAATAGTAGCATGTGGT+TGG | - | tig0030547:18873-18892 | Msa1443840:CDS | 35.0% | |
| CAACAGTGTATTACAATCTG+AGG | - | tig0030547:19017-19036 | Msa1443840:intron | 35.0% | |
| CTAATTCCTAGCATTAGCAT+AGG | + | tig0030547:19103-19122 | None:intergenic | 35.0% | |
| CTAATGCTAGGAATTAGCAT+TGG | - | tig0030547:19106-19125 | Msa1443840:intron | 35.0% | |
| ! | TGTCATATTTGCTGATTGGA+TGG | - | tig0030547:19141-19160 | Msa1443840:intron | 35.0% |
| CTGTTTAGCATAATTGCTCT+TGG | - | tig0030547:19208-19227 | Msa1443840:CDS | 35.0% | |
| !!! | GCTCTTCTGTTTGTGTTTTT+TGG | - | tig0030547:19237-19256 | Msa1443840:CDS | 35.0% |
| !!! | TTTTTTGGGAAAGAAGCACA+TGG | - | tig0030547:19252-19271 | Msa1443840:CDS | 35.0% |
| ! | TGTTGATTGTGTAAATGCGT+TGG | + | tig0030547:19423-19442 | None:intergenic | 35.0% |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | tig0030547:19535-19554 | None:intergenic | 35.0% | |
| ! | TATCCAGTTGATGCAACATA+TGG | - | tig0030547:19831-19850 | Msa1443840:intron | 35.0% |
| TTGATGCAACATATGGTGAT+AGG | - | tig0030547:19838-19857 | Msa1443840:intron | 35.0% | |
| ! | TCCACTAAAGCTTTAGTCAA+AGG | - | tig0030547:19865-19884 | Msa1443840:intron | 35.0% |
| TACTATGCTACTGAACTTTC+AGG | - | tig0030547:19994-20013 | Msa1443840:intron | 35.0% | |
| AGAACCTGATTCCAACATTT+GGG | + | tig0030547:20038-20057 | None:intergenic | 35.0% | |
| TAGAACCTGATTCCAACATT+TGG | + | tig0030547:20039-20058 | None:intergenic | 35.0% | |
| AGCCATCTACATGTAATAAC+TGG | + | tig0030547:20089-20108 | None:intergenic | 35.0% | |
| !! | TCAGAAGCATCTGATATAAG+GGG | + | tig0030547:20244-20263 | None:intergenic | 35.0% |
| !! | CTTCAGAAGCATCTGATATA+AGG | + | tig0030547:20246-20265 | None:intergenic | 35.0% |
| CAGTGAATGTTGTCAAGTAA+AGG | + | tig0030547:20408-20427 | None:intergenic | 35.0% | |
| CTTTACTTGACAACATTCAC+TGG | - | tig0030547:20406-20425 | Msa1443840:intron | 35.0% | |
| AGTTCTTATGTATGTTTGGG+TGG | - | tig0030547:20440-20459 | Msa1443840:intron | 35.0% | |
| ! | AGTATTCTTAATCGGTGTTC+CGG | + | tig0030547:20940-20959 | None:intergenic | 35.0% |
| GAATTTCGTCCCTGTAATAT+AGG | - | tig0030547:21205-21224 | Msa1443840:intron | 35.0% | |
| CAAAACACGCCTATATTACA+GGG | + | tig0030547:22868-22887 | None:intergenic | 35.0% | |
| TCAAAACACGCCTATATTAC+AGG | + | tig0030547:22867-22886 | None:intergenic | 35.0% | |
| !! | TTTTGTTTGAAAATGGTCCC+TGG | - | tig0030547:21288-21307 | Msa1443840:intron | 35.0% |
| TTTGTTTGAAAATGGTCCCT+GGG | - | tig0030547:21289-21308 | Msa1443840:intron | 35.0% | |
| TTTGTTTGAAAATGGTCCCT+GGG | + | tig0030547:21289-21308 | None:intergenic | 35.0% | |
| !! | TTTTGTTTGAAAATGGTCCC+TGG | + | tig0030547:21288-21307 | None:intergenic | 35.0% |
| TCAAAACACGCCTATATTAC+AGG | - | tig0030547:22867-22886 | Msa1443840:intron | 35.0% | |
| CAAAACACGCCTATATTACA+GGG | - | tig0030547:22868-22887 | Msa1443840:intron | 35.0% | |
| GAATTTCGTCCCTGTAATAT+AGG | + | tig0030547:21205-21224 | None:intergenic | 35.0% | |
| TGCAAGGTCTAACTGAAATT+TGG | - | tig0030547:22979-22998 | Msa1443840:intron | 35.0% | |
| AGTTCCTTTGCATAAGCATA+TGG | + | tig0030547:23060-23079 | None:intergenic | 35.0% | |
| GAACTAGAGTAATTGCATCA+AGG | - | tig0030547:23075-23094 | Msa1443840:intron | 35.0% | |
| ACTAGAGTAATTGCATCAAG+GGG | - | tig0030547:23077-23096 | Msa1443840:intron | 35.0% | |
| ATAATAGCTGGTATGGTTAG+TGG | - | tig0030547:23152-23171 | Msa1443840:intron | 35.0% | |
| !!! | CATTTTGGGACCATTGTTTT+TGG | - | tig0030547:23199-23218 | Msa1443840:intron | 35.0% |
| !!! | GGACCATTGTTTTTGGAATT+GGG | - | tig0030547:23206-23225 | Msa1443840:intron | 35.0% |
| AATGAATGAGTTTGTACCTG+AGG | + | tig0030547:23239-23258 | None:intergenic | 35.0% | |
| TTAATGAGGTCTCGGTTTAA+TGG | - | tig0030547:23318-23337 | Msa1443840:CDS | 35.0% | |
| TTATCTTTCTCACCACATGT+TGG | + | tig0030547:23745-23764 | None:intergenic | 35.0% | |
| TGCCACCATGGAAAAAAATT+TGG | - | tig0030547:24061-24080 | Msa1443840:CDS | 35.0% | |
| GCCACCATGGAAAAAAATTT+GGG | - | tig0030547:24062-24081 | Msa1443840:CDS | 35.0% | |
| CCACCATGGAAAAAAATTTG+GGG | - | tig0030547:24063-24082 | Msa1443840:CDS | 35.0% | |
| CATTGTACATGAGAATGAGT+AGG | + | tig0030547:24360-24379 | None:intergenic | 35.0% | |
| !! | CAATTATATGGCTAGTCTCG+TGG | - | tig0030547:18314-18333 | Msa1443840:three_prime_UTR | 40.0% |
| AGTCTTCCTATGAACGTGTT+TGG | - | tig0030547:18443-18462 | Msa1443840:intron | 40.0% | |
| GTTGAGCAGGAAATGAAGTT+TGG | - | tig0030547:18582-18601 | Msa1443840:intron | 40.0% | |
| AGCAGGAAATGAAGTTTGGT+TGG | - | tig0030547:18586-18605 | Msa1443840:intron | 40.0% | |
| TTTGGTTGGAGAATTGTCGT+AGG | - | tig0030547:18600-18619 | Msa1443840:intron | 40.0% | |
| !!! | TGGATTTTTTGGAGCAGCAT+TGG | - | tig0030547:18632-18651 | Msa1443840:CDS | 40.0% |
| !!! | GGATTTTTTGGAGCAGCATT+GGG | - | tig0030547:18633-18652 | Msa1443840:CDS | 40.0% |
| ! | TCGCGTCTCAAATACAGTTT+TGG | - | tig0030547:18832-18851 | Msa1443840:intron | 40.0% |
| TTCATATAGTTTCCGAACCG+CGG | + | tig0030547:18899-18918 | None:intergenic | 40.0% | |
| !! | ATATGAACTAGCTCTGAACG+CGG | - | tig0030547:18912-18931 | Msa1443840:CDS | 40.0% |
| TAAGTGGCATGTCTAGTGTA+GGG | + | tig0030547:19051-19070 | None:intergenic | 40.0% | |
| ATAAGTGGCATGTCTAGTGT+AGG | + | tig0030547:19052-19071 | None:intergenic | 40.0% | |
| TGCAGCCAACATATTGCATT+TGG | - | tig0030547:19359-19378 | Msa1443840:CDS | 40.0% | |
| TTGCTTAGGCAATCCCAATT+CGG | + | tig0030547:19399-19418 | None:intergenic | 40.0% | |
| GTAAATGCGTTGGATTGCTT+AGG | + | tig0030547:19413-19432 | None:intergenic | 40.0% | |
| ACCGACAAATTGAGATCAGA+CGG | - | tig0030547:19451-19470 | Msa1443840:intron | 40.0% | |
| ACCGTCTGATCTCAATTTGT+CGG | + | tig0030547:19455-19474 | None:intergenic | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | tig0030547:19592-19611 | None:intergenic | 40.0% | |
| TCACCATATGTTGCATCAAC+TGG | + | tig0030547:19837-19856 | None:intergenic | 40.0% | |
| ! | GCCTTTGACTAAAGCTTTAG+TGG | + | tig0030547:19869-19888 | None:intergenic | 40.0% |
| !! | TAGTCAAAGGCATCGATACA+TGG | - | tig0030547:19878-19897 | Msa1443840:intron | 40.0% |
| !! | AGGCATCGATACATGGAAAA+AGG | - | tig0030547:19885-19904 | Msa1443840:intron | 40.0% |
| GTTTGTAGGCACTTACAATC+AGG | + | tig0030547:20064-20083 | None:intergenic | 40.0% | |
| TCTTCATCTTGTAGATCAGC+TGG | + | tig0030547:20286-20305 | None:intergenic | 40.0% | |
| AGCTGATCTACAAGATGAAG+AGG | - | tig0030547:20285-20304 | Msa1443840:intron | 40.0% | |
| AGAATGATCTGGAAAACCCT+TGG | + | tig0030547:20320-20339 | None:intergenic | 40.0% | |
| ACTTGACAACATTCACTGGA+AGG | - | tig0030547:20410-20429 | Msa1443840:intron | 40.0% | |
| TTGGCTTCTTAATTCCTTGC+AGG | - | tig0030547:20615-20634 | Msa1443840:intron | 40.0% | |
| ! | TATTCTTAATCGGTGTTCCG+GGG | + | tig0030547:20938-20957 | None:intergenic | 40.0% |
| ! | GTATTCTTAATCGGTGTTCC+GGG | + | tig0030547:20939-20958 | None:intergenic | 40.0% |
| GAAGCCATATGCTTATGCAA+AGG | - | tig0030547:23053-23072 | Msa1443840:intron | 40.0% | |
| AGTAATTGCATCAAGGGGAA+AGG | - | tig0030547:23082-23101 | Msa1443840:intron | 40.0% | |
| ATCTGTCTTTACTGCTTCTG+TGG | - | tig0030547:23128-23147 | Msa1443840:intron | 40.0% | |
| TGCTTCTGTGGAATAATAGC+TGG | - | tig0030547:23140-23159 | Msa1443840:intron | 40.0% | |
| CTGTGGAATAATAGCTGGTA+TGG | - | tig0030547:23145-23164 | Msa1443840:intron | 40.0% | |
| !!! | GGGACCATTGTTTTTGGAAT+TGG | - | tig0030547:23205-23224 | Msa1443840:intron | 40.0% |
| ATATTGTACCACTGACATGG+AGG | + | tig0030547:23533-23552 | None:intergenic | 40.0% | |
| ! | GTTTCTTACCATAGGGTACT+GGG | + | tig0030547:23573-23592 | None:intergenic | 40.0% |
| TGTTTCTTACCATAGGGTAC+TGG | + | tig0030547:23574-23593 | None:intergenic | 40.0% | |
| ACTGATTGCGCTCACAAAAA+TGG | + | tig0030547:23816-23835 | None:intergenic | 40.0% | |
| TTTGTGAGCGCAATCAGTTT+AGG | - | tig0030547:23818-23837 | Msa1443840:CDS | 40.0% | |
| !!! | GTCTCATTTTTGGCTATCAC+AGG | - | tig0030547:23971-23990 | Msa1443840:intron | 40.0% |
| !!! | TCATTTTTGGCTATCACAGG+TGG | - | tig0030547:23974-23993 | Msa1443840:intron | 40.0% |
| !!! | CATTTTTGGCTATCACAGGT+GGG | - | tig0030547:23975-23994 | Msa1443840:intron | 40.0% |
| !!! | ATTTTTGGCTATCACAGGTG+GGG | - | tig0030547:23976-23995 | Msa1443840:intron | 40.0% |
| !!! | CCCCAAATTTTTTTCCATGG+TGG | + | tig0030547:24066-24085 | None:intergenic | 40.0% |
| GCAGATTGTGTAACAATGAC+TGG | - | tig0030547:24191-24210 | Msa1443840:five_prime_UTR | 40.0% | |
| AAACTTGGGGGTTTGGAAAC+AGG | - | tig0030547:18068-18087 | Msa1443840:three_prime_UTR | 45.0% | |
| GCTATTGCAGGCATGATTAC+AGG | - | tig0030547:18983-19002 | Msa1443840:intron | 45.0% | |
| TTCCAGCCTATGCTAATGCT+AGG | - | tig0030547:19094-19113 | Msa1443840:intron | 45.0% | |
| TTCCTAGCATTAGCATAGGC+TGG | + | tig0030547:19099-19118 | None:intergenic | 45.0% | |
| ATCAGCATATAGGTGGTCGT+TGG | + | tig0030547:19749-19768 | None:intergenic | 45.0% | |
| TCACGCAATCAGCATATAGG+TGG | + | tig0030547:19756-19775 | None:intergenic | 45.0% | |
| GCATCACGCAATCAGCATAT+AGG | + | tig0030547:19759-19778 | None:intergenic | 45.0% | |
| GAACTTTCAGGAAGCCTTTG+AGG | - | tig0030547:20006-20025 | Msa1443840:intron | 45.0% | |
| AGATGTAGCAGAAGTCTGAC+AGG | - | tig0030547:22217-22236 | Msa1443840:intron | 45.0% | |
| CAAGGGGAAAGGAAATCACT+TGG | - | tig0030547:23093-23112 | Msa1443840:intron | 45.0% | |
| !! | GGTATGGTTAGTGGTTTGCT+TGG | - | tig0030547:23161-23180 | Msa1443840:intron | 45.0% |
| !! | GTTAGTGGTTTGCTTGGTCT+AGG | - | tig0030547:23167-23186 | Msa1443840:intron | 45.0% |
| ! | TCTAGGAGGTGGCTTCATTT+TGG | - | tig0030547:23184-23203 | Msa1443840:intron | 45.0% |
| ! | CTAGGAGGTGGCTTCATTTT+GGG | - | tig0030547:23185-23204 | Msa1443840:intron | 45.0% |
| GAATGAGTTTGTACCTGAGG+AGG | + | tig0030547:23236-23255 | None:intergenic | 45.0% | |
| TTTCTCTTCCTCCATGTCAG+TGG | - | tig0030547:23522-23541 | Msa1443840:intron | 45.0% | |
| GCAACCATAGCTGCATTAAC+CGG | - | tig0030547:23719-23738 | Msa1443840:CDS | 45.0% | |
| AGGCAACATGGTTGAGAAGA+TGG | - | tig0030547:24006-24025 | Msa1443840:CDS | 45.0% | |
| TTTGACAATCTCTGCCACCA+TGG | - | tig0030547:24049-24068 | Msa1443840:CDS | 45.0% | |
| !!! | TTTTTTATTTTTTAATTATG+TGG | + | tig0030547:21402-21421 | None:intergenic | 5.0% |
| !!! | TATTATTTTTAGATTTTTTT+TGG | + | tig0030547:21500-21519 | None:intergenic | 5.0% |
| !!! | ATGATTTTTAAATTTATTTT+GGG | + | tig0030547:22473-22492 | None:intergenic | 5.0% |
| !!! | TATGATTTTTAAATTTATTT+TGG | + | tig0030547:22472-22491 | None:intergenic | 5.0% |
| !!! | TTTTAAAATTTAATATTATG+TGG | - | tig0030547:22683-22702 | Msa1443840:intron | 5.0% |
| CACAGGCCAAACACGTTCAT+AGG | + | tig0030547:18452-18471 | None:intergenic | 50.0% | |
| ! | TTGGGAAGTGTAGGAGGAGT+AGG | - | tig0030547:18651-18670 | Msa1443840:CDS | 50.0% |
| GAGAGGGCTGTAGAAGACTT+TGG | + | tig0030547:18726-18745 | None:intergenic | 50.0% | |
| GCATGATTACAGGAGCAGCT+GGG | - | tig0030547:18993-19012 | Msa1443840:intron | 50.0% | |
| CATTTGGGCTGCTTCCTCAA+AGG | + | tig0030547:20023-20042 | None:intergenic | 50.0% | |
| TGAGGAAGCAGCCCAAATGT+TGG | - | tig0030547:20024-20043 | Msa1443840:intron | 50.0% | |
| GCAGCCCAAATGTTGGAATC+AGG | - | tig0030547:20031-20050 | Msa1443840:intron | 50.0% | |
| AGAAATGTTAACCGGTGCCC+CGG | - | tig0030547:20918-20937 | Msa1443840:intron | 50.0% | |
| GTATCCTTAACCAGTGCCCA+GGG | - | tig0030547:21065-21084 | Msa1443840:intron | 50.0% | |
| TGCCAACTCAGCTGAACAGT+GGG | + | tig0030547:21315-21334 | None:intergenic | 50.0% | |
| TTGCCAACTCAGCTGAACAG+TGG | + | tig0030547:21316-21335 | None:intergenic | 50.0% | |
| ! | ACTGTTCAGCTGAGTTGGCA+AGG | - | tig0030547:21315-21334 | Msa1443840:intron | 50.0% |
| ! | CTGTTCAGCTGAGTTGGCAA+GGG | - | tig0030547:21316-21335 | Msa1443840:intron | 50.0% |
| ! | ACTGTGCAACTTTTGCCACG+TGG | - | tig0030547:21361-21380 | Msa1443840:intron | 50.0% |
| ! | ACTGTGCAACTTTTGCCACG+TGG | + | tig0030547:21361-21380 | None:intergenic | 50.0% |
| !! | AGTGGTTTGCTTGGTCTAGG+AGG | - | tig0030547:23170-23189 | Msa1443840:intron | 50.0% |
| GGAATTGGGAATTCCTCCTC+AGG | - | tig0030547:23220-23239 | Msa1443840:intron | 50.0% | |
| TTGGCCGGTTAATGCAGCTA+TGG | + | tig0030547:23726-23745 | None:intergenic | 50.0% | |
| TGCATTAACCGGCCAACATG+TGG | - | tig0030547:23730-23749 | Msa1443840:CDS | 50.0% | |
| CTTTCTCACCACATGTTGGC+CGG | + | tig0030547:23741-23760 | None:intergenic | 50.0% | |
| ! | GGAGCAGCATTGGGAAGTGT+AGG | - | tig0030547:18642-18661 | Msa1443840:CDS | 55.0% |
| ! | GCAGCATTGGGAAGTGTAGG+AGG | - | tig0030547:18645-18664 | Msa1443840:CDS | 55.0% |
| ! | GGAAGTGTAGGAGGAGTAGG+AGG | - | tig0030547:18654-18673 | Msa1443840:CDS | 55.0% |
| AGTGTAGGAGGAGTAGGAGG+TGG | - | tig0030547:18657-18676 | Msa1443840:CDS | 55.0% | |
| ! | TAGTAGCATGTGGTTGGCCG+CGG | - | tig0030547:18879-18898 | Msa1443840:CDS | 55.0% |
| GGCATGATTACAGGAGCAGC+TGG | - | tig0030547:18992-19011 | Msa1443840:intron | 55.0% | |
| GGTATCCTTAACCAGTGCCC+AGG | - | tig0030547:21064-21083 | Msa1443840:intron | 55.0% | |
| TCATGCTAACCGGTGTCCCT+GGG | + | tig0030547:21084-21103 | None:intergenic | 55.0% | |
| ! | CAGCTGAGTTGGCAAGGGTT+TGG | - | tig0030547:21321-21340 | Msa1443840:intron | 55.0% |
| !! | ACTGTAGCGCTGATGTGGCA+TGG | + | tig0030547:22770-22789 | None:intergenic | 55.0% |
| ATGCCACATCAGCGCTACAG+TGG | - | tig0030547:22769-22788 | Msa1443840:intron | 55.0% | |
| TGCCACATCAGCGCTACAGT+GGG | - | tig0030547:22770-22789 | Msa1443840:intron | 55.0% | |
| ! | GGTTTGCTTGGTCTAGGAGG+TGG | - | tig0030547:23173-23192 | Msa1443840:intron | 55.0% |
| GATCGCTTCCCAGTACCCTA+TGG | - | tig0030547:23562-23581 | Msa1443840:intron | 55.0% | |
| TTTGGCTATCACAGGTGGGG+TGG | - | tig0030547:23979-23998 | Msa1443840:intron | 55.0% | |
| TTGGCTATCACAGGTGGGGT+GGG | - | tig0030547:23980-23999 | Msa1443840:intron | 55.0% | |
| ATCACAGGTGGGGTGGGAAT+AGG | - | tig0030547:23986-24005 | Msa1443840:CDS | 55.0% | |
| TGGGGTGGGAATAGGCAACA+TGG | - | tig0030547:23994-24013 | Msa1443840:CDS | 55.0% | |
| GTAGGAGGAGTAGGAGGTGG+AGG | - | tig0030547:18660-18679 | Msa1443840:CDS | 60.0% | |
| ! | TAATCGGTGTTCCGGGGCAC+CGG | + | tig0030547:20932-20951 | None:intergenic | 60.0% |
| !! | GTGTCCCTGGGCACTGGTTA+AGG | + | tig0030547:21072-21091 | None:intergenic | 60.0% |
| TAACCAGTGCCCAGGGACAC+CGG | - | tig0030547:21072-21091 | Msa1443840:intron | 60.0% | |
| GTCATGCTAACCGGTGTCCC+TGG | + | tig0030547:21085-21104 | None:intergenic | 60.0% | |
| TCAGCTGAACAGTGGGCCCA+GGG | + | tig0030547:21308-21327 | None:intergenic | 60.0% | |
| GGCCCACTGTTCAGCTGAGT+TGG | - | tig0030547:21310-21329 | Msa1443840:intron | 60.0% | |
| TTGGCAAGGGTTTGGCCACG+TGG | - | tig0030547:21329-21348 | Msa1443840:intron | 60.0% | |
| CACAGTCAGCAACTGCCACG+TGG | + | tig0030547:22738-22757 | None:intergenic | 60.0% | |
| ! | CAACTTTTGCCACGTGGCGC+TGG | - | tig0030547:21367-21386 | Msa1443840:intron | 60.0% |
| !! | TTTGCCACGTGGCACTGACG+TGG | + | tig0030547:22713-22732 | None:intergenic | 60.0% |
| CACAGTCAGCAACTGCCACG+TGG | - | tig0030547:22738-22757 | Msa1443840:intron | 60.0% | |
| ! | GCATGTGGTTGGCCGCGGTT+CGG | - | tig0030547:18884-18903 | Msa1443840:CDS | 65.0% |
| TAACCGGTGTCCCTGGGCAC+TGG | + | tig0030547:21078-21097 | None:intergenic | 65.0% | |
| CTCAGCTGAACAGTGGGCCC+AGG | + | tig0030547:21309-21328 | None:intergenic | 65.0% | |
| GTGGCATGGCATTCGCCACG+TGG | + | tig0030547:22756-22775 | None:intergenic | 65.0% | |
| !! | GGCCCACTGTAGCGCTGATG+TGG | + | tig0030547:22775-22794 | None:intergenic | 65.0% |
| ATCAGCGCTACAGTGGGCCC+AGG | - | tig0030547:22776-22795 | Msa1443840:intron | 65.0% | |
| TCAGCGCTACAGTGGGCCCA+GGG | - | tig0030547:22777-22796 | Msa1443840:intron | 65.0% | |
| !! | TTTGCCACGTGGCGCTGGCG+TGG | - | tig0030547:21372-21391 | Msa1443840:intron | 70.0% |
| CACGCCACGTCAGTGCCACG+TGG | - | tig0030547:22706-22725 | Msa1443840:intron | 70.0% | |
| ! | CACGCCACGCCAGCGCCACG+TGG | + | tig0030547:21379-21398 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030547 | gene | 18066 | 24383 | 18066 | ID=Msa1443840;Name=Msa1443840 |
| tig0030547 | mRNA | 18066 | 24383 | 18066 | ID=Msa1443840-mRNA-1;Parent=Msa1443840;Name=Msa1443840-mRNA-1;_AED=0.18;_eAED=0.18;_QI=202|1|1|1|1|1|12|293|473 |
| tig0030547 | exon | 18066 | 18456 | 18066 | ID=Msa1443840-mRNA-1:exon:14149;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 18610 | 18750 | 18610 | ID=Msa1443840-mRNA-1:exon:14148;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 18866 | 18959 | 18866 | ID=Msa1443840-mRNA-1:exon:14147;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 19208 | 19426 | 19208 | ID=Msa1443840-mRNA-1:exon:14146;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 21813 | 21863 | 21813 | ID=Msa1443840-mRNA-1:exon:14145;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 21961 | 22047 | 21961 | ID=Msa1443840-mRNA-1:exon:14144;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 22143 | 22195 | 22143 | ID=Msa1443840-mRNA-1:exon:14143;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 22382 | 22433 | 22382 | ID=Msa1443840-mRNA-1:exon:14142;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 22525 | 22589 | 22525 | ID=Msa1443840-mRNA-1:exon:14141;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 23256 | 23456 | 23256 | ID=Msa1443840-mRNA-1:exon:14140;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 23699 | 23858 | 23699 | ID=Msa1443840-mRNA-1:exon:14139;Parent=Msa1443840-mRNA-1 |
| tig0030547 | exon | 23981 | 24383 | 23981 | ID=Msa1443840-mRNA-1:exon:14138;Parent=Msa1443840-mRNA-1 |
| tig0030547 | five_prime_UTR | 24182 | 24383 | 24182 | ID=Msa1443840-mRNA-1:five_prime_utr;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 23981 | 24181 | 23981 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 23699 | 23858 | 23699 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 23256 | 23456 | 23256 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 22525 | 22589 | 22525 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 22382 | 22433 | 22382 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 22143 | 22195 | 22143 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 21961 | 22047 | 21961 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 21813 | 21863 | 21813 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 19208 | 19426 | 19208 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 18866 | 18959 | 18866 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 18610 | 18750 | 18610 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | CDS | 18359 | 18456 | 18359 | ID=Msa1443840-mRNA-1:cds;Parent=Msa1443840-mRNA-1 |
| tig0030547 | three_prime_UTR | 18066 | 18358 | 18066 | ID=Msa1443840-mRNA-1:three_prime_utr;Parent=Msa1443840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
