AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1255280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255280 MtrunA17_Chr8g0373471 98.309 473 8 0 1 473 1 473 0.0 946
Msa1255280 MtrunA17_Chr5g0403901 73.319 461 103 4 19 467 18 470 0.0 593
Msa1255280 MtrunA17_Chr3g0139541 64.871 427 133 5 49 468 53 469 0.0 517
Msa1255280 MtrunA17_Chr8g0380211 62.319 414 151 3 62 470 67 480 1.21e-156 453
Msa1255280 MtrunA17_Chr1g0157751 50.547 457 210 5 20 466 6 456 1.39e-143 419
Msa1255280 MtrunA17_Chr7g0265481 51.816 413 185 3 63 465 51 459 2.76e-125 372
Msa1255280 MtrunA17_Chr8g0380191 57.349 347 107 3 122 467 10 316 1.79e-124 365
Msa1255280 MtrunA17_Chr1g0179621 47.484 457 229 4 17 465 9 462 2.98e-120 359
Msa1255280 MtrunA17_Chr2g0280401 28.982 383 252 7 100 465 87 466 4.25e-42 155
Msa1255280 MtrunA17_Chr3g0139621 48.305 118 38 2 301 395 27 144 1.09e-17 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255280 AT2G25737.1 61.937 444 152 5 36 468 38 475 6.81e-179 509
Msa1255280 AT2G25737.2 60.615 325 114 4 48 364 53 371 4.51e-122 361
Msa1255280 AT2G36630.1 47.962 417 207 3 57 465 42 456 4.21e-118 354
Msa1255280 AT1G11540.2 32.274 409 244 7 76 465 56 450 6.56e-47 169
Msa1255280 AT1G11540.1 31.759 381 227 7 104 465 1 367 3.16e-46 164
Msa1255280 AT1G61740.1 30.000 420 261 7 67 465 51 458 2.15e-44 162
Msa1255280 AT4G21250.1 31.690 426 236 9 68 465 51 449 1.22e-38 146
Msa1255280 AT4G21260.1 27.500 400 227 10 68 465 55 393 1.56e-28 117

Find 115 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAGGAGGTGGCTTCATTT+TGG 0.204042 8_2:-53744018 Msa1255280:CDS
TTCAAAATGCTGGTTATTCT+AGG 0.226848 8_2:+53747231 None:intergenic
GATGGAAAATGAAGAATATA+TGG 0.247767 8_2:-53743177 Msa1255280:CDS
TATCAGTTCTTATGTATGTT+TGG 0.264788 8_2:-53745039 Msa1255280:CDS
AAAGGAAACAATTATGAAAA+AGG 0.272024 8_2:-53745732 Msa1255280:intron
GTTATTGCAGGTATGATTAC+AGG 0.290362 8_2:-53746368 Msa1255280:intron
ATCAGTTCTTATGTATGTTT+GGG 0.291680 8_2:-53745038 Msa1255280:CDS
TTGAAATGGGGTTTGGAAAC+AGG 0.308611 8_2:-53747330 None:intergenic
TGAACGGTTTGAAACAAAAT+AGG 0.309051 8_2:+53747155 None:intergenic
ATATATTGCACTTCAAACTA+TGG 0.315520 8_2:+53742877 None:intergenic
AGAAAGATAATTGCTATCTT+TGG 0.319840 8_2:-53743446 Msa1255280:CDS
AGTGTAGGAGGGGTAGGAGG+TGG 0.323655 8_2:-53746740 Msa1255280:CDS
AGGCATCGATACATGGAAAA+AGG 0.325374 8_2:-53745750 Msa1255280:CDS
GCCTTTGACTAAAGCTTTAG+TGG 0.329119 8_2:+53745769 None:intergenic
CCTATGCTCACTTTGATCAT+TGG 0.330446 8_2:-53746704 Msa1255280:CDS
TAAACGGTATGTTACATAAT+TGG 0.337245 8_2:+53742903 None:intergenic
TTGGCTTCTTAATTCCTTGC+AGG 0.341432 8_2:-53744861 Msa1255280:intron
TAGAACCTGATTCCAACATT+TGG 0.359466 8_2:+53745439 None:intergenic
GAGAAGCATCAACAATTATA+TGG 0.361224 8_2:-53747095 Msa1255280:CDS
ATTAAGAAGCCAATACTCTA+TGG 0.361665 8_2:+53744871 None:intergenic
AGTTCCTTTGCATAAGCATA+TGG 0.364228 8_2:+53744145 None:intergenic
TCTCATTGTTCAAATTCTTA+AGG 0.370958 8_2:-53745008 Msa1255280:intron
TGTTTCTTACCATAGGGTAC+TGG 0.386212 8_2:+53743630 None:intergenic
ATCACAGGTGGGGTGGGAAT+AGG 0.390427 8_2:-53743215 Msa1255280:intron
AGAACCTGATTCCAACATTT+GGG 0.395873 8_2:+53745440 None:intergenic
GAATAGAATGATAAGCAAAA+TGG 0.396738 8_2:+53746184 None:intergenic
GTAGGAGGGGTAGGAGGTGG+AGG 0.399768 8_2:-53746737 Msa1255280:CDS
GTTGAGCAGGAAATGAAGTT+TGG 0.401432 8_2:-53746815 Msa1255280:intron
TTGGGAAGTGTAGGAGGGGT+AGG 0.403096 8_2:-53746746 Msa1255280:CDS
GTTAGTGGTTTGCTTGGTCT+AGG 0.405722 8_2:-53744035 Msa1255280:CDS
TTCGTCTTCGAAAACTCTTT+CGG 0.407295 8_2:+53747029 None:intergenic
GGAAGTGTAGGAGGGGTAGG+AGG 0.412992 8_2:-53746743 Msa1255280:CDS
TTTGTGAGCGCAATCAGTTT+AGG 0.416463 8_2:-53743383 Msa1255280:intron
GAGAGGGCTGTAGAAGACTT+TGG 0.417036 8_2:+53746674 None:intergenic
TTAATGTCATGTTTGCTGAT+TGG 0.426685 8_2:-53746214 Msa1255280:CDS
GAACTTTCAGGAAGCCTTTG+AGG 0.428813 8_2:-53745469 Msa1255280:intron
AGTCTTCATATGAACGTGTT+TGG 0.432389 8_2:-53746954 Msa1255280:CDS
AGTGTAACAGAAATTGCAAT+AGG 0.433950 8_2:+53744176 None:intergenic
AAACTTGTTCCATAGAGTAT+TGG 0.436863 8_2:-53744880 Msa1255280:CDS
ATAATAGCTGGTATGGTTAG+TGG 0.442928 8_2:-53744050 Msa1255280:CDS
AGGCAACATGGTTGAGAAGA+TGG 0.444124 8_2:-53743195 Msa1255280:CDS
CTTCAAACTATGGTCATAAA+CGG 0.445809 8_2:+53742887 None:intergenic
ATGGAAAATGAAGAATATAT+GGG 0.453528 8_2:-53743176 Msa1255280:CDS
CTTTACTTGACAACATTCAC+TGG 0.454961 8_2:-53745069 Msa1255280:CDS
GCAGCCCAAATGTTGGAATC+AGG 0.455292 8_2:-53745444 Msa1255280:CDS
AGCAGGAAATGAAGTTTGGT+TGG 0.456534 8_2:-53746811 Msa1255280:intron
GCAACCATAGCTGCATTAAC+CGG 0.462747 8_2:-53743482 Msa1255280:CDS
CAGTGAATGTTGTCAAGTAA+AGG 0.464845 8_2:+53745070 None:intergenic
GGTTTGCTTGGTCTAGGAGG+TGG 0.469170 8_2:-53744029 Msa1255280:CDS
CAATTATATGGCTAGTTTCG+TGG 0.472977 8_2:-53747083 Msa1255280:CDS
ATTGTCGTAGGTTCTATTGT+TGG 0.473965 8_2:-53746785 Msa1255280:CDS
AGTGAATGTTGTCAAGTAAA+GGG 0.481684 8_2:+53745071 None:intergenic
GGAATTGGGAATTCCTCCTC+AGG 0.483527 8_2:-53743982 Msa1255280:intron
GGTATGATTACAGGAGCAGC+TGG 0.484398 8_2:-53746359 Msa1255280:CDS
CTGTGGAATAATAGCTGGTA+TGG 0.485082 8_2:-53744057 Msa1255280:CDS
AACTAGAGTAATTGCATCAA+GGG 0.487063 8_2:-53744126 Msa1255280:CDS
TGTTTCAAACCGTTCATACA+TGG 0.488172 8_2:-53747148 Msa1255280:exon
TTGCTTATCATTCTATTCAT+CGG 0.491065 8_2:-53746179 Msa1255280:intron
TGCTTCTGTGGAATAATAGC+TGG 0.491856 8_2:-53744062 Msa1255280:CDS
TTGGCTATCACAGGTGGGGT+GGG 0.492087 8_2:-53743221 Msa1255280:intron
TTTGGCTATCACAGGTGGGG+TGG 0.493274 8_2:-53743222 Msa1255280:intron
TCTTCATCTTGTAGATCAGC+TGG 0.493935 8_2:+53745192 None:intergenic
CTTTCTCACCACATGTTGGC+CGG 0.494055 8_2:+53743463 None:intergenic
GGTATGGTTAGTGGTTTGCT+TGG 0.496243 8_2:-53744041 Msa1255280:CDS
AGTTCTTATGTATGTTTGGG+TGG 0.502161 8_2:-53745035 Msa1255280:CDS
GCAAGATCATAATCTATAAG+TGG 0.507543 8_2:+53746287 None:intergenic
GCAGATTGTGTAACAATGAC+TGG 0.507617 8_2:-53743014 Msa1255280:three_prime_UTR
CAATGATCAAAGTGAGCATA+GGG 0.509691 8_2:+53746705 None:intergenic
GAACTAGAGTAATTGCATCA+AGG 0.511872 8_2:-53744127 Msa1255280:CDS
ATCTGTCTTTACTGCTTCTG+TGG 0.513821 8_2:-53744074 Msa1255280:CDS
CATTTGGGCTGCTTCCTCAA+AGG 0.514918 8_2:+53745455 None:intergenic
GCAGCATTGGGAAGTGTAGG+AGG 0.516125 8_2:-53746752 Msa1255280:CDS
GGAGCAGCATTGGGAAGTGT+AGG 0.522662 8_2:-53746755 Msa1255280:CDS
CAAGGGGAAAGGAAATCACT+TGG 0.523181 8_2:-53744109 Msa1255280:CDS
GTTTCTTACCATAGGGTACT+GGG 0.530425 8_2:+53743631 None:intergenic
TAGTCAAAGGCATCGATACA+TGG 0.531192 8_2:-53745757 Msa1255280:CDS
AGAAGTTTCTTCTGGTACAG+TGG 0.532914 8_2:-53746979 Msa1255280:CDS
GATCGCTTCCCAGTACCCTA+TGG 0.534547 8_2:-53743639 Msa1255280:intron
CCAATGATCAAAGTGAGCAT+AGG 0.539472 8_2:+53746704 None:intergenic
CTTCGAAAGCCATGTATGAA+CGG 0.542487 8_2:+53747139 None:intergenic
TGTCATGTTTGCTGATTGGA+TGG 0.542804 8_2:-53746210 Msa1255280:CDS
TTTCTCTTCCTCCATGTCAG+TGG 0.546653 8_2:-53743679 Msa1255280:CDS
CATTGTACATGAGAATGAGT+AGG 0.553335 8_2:+53742848 None:intergenic
TAAGTGGCATGTCTAGTGTT+GGG 0.556589 8_2:+53746303 None:intergenic
AATATGTAGAAAATTTAGAA+AGG 0.559766 8_2:+53743049 None:intergenic
AGTGGTTTGCTTGGTCTAGG+AGG 0.560215 8_2:-53744032 Msa1255280:CDS
AGCTGATCTACAAGATGAAG+AGG 0.560678 8_2:-53745190 Msa1255280:intron
CAGCATTGGGAAGTGTAGGA+GGG 0.565603 8_2:-53746751 Msa1255280:CDS
TCCACTAAAGCTTTAGTCAA+AGG 0.565804 8_2:-53745770 Msa1255280:CDS
ATATATAATATTTACCTGCA+AGG 0.570892 8_2:+53744847 None:intergenic
CTAATTCCTAGCATTAGCAT+AGG 0.571256 8_2:+53746251 None:intergenic
TGAGGAAGCAGCCCAAATGT+TGG 0.572269 8_2:-53745451 Msa1255280:CDS
ACTTGACAACATTCACTGGA+AGG 0.572833 8_2:-53745065 Msa1255280:CDS
AGTAATTGCATCAAGGGGAA+AGG 0.574209 8_2:-53744120 Msa1255280:CDS
TGCATTAACCGGCCAACATG+TGG 0.574265 8_2:-53743471 Msa1255280:CDS
ATAAGTGGCATGTCTAGTGT+TGG 0.578798 8_2:+53746302 None:intergenic
GAAGCCATATGCTTATGCAA+AGG 0.580245 8_2:-53744149 Msa1255280:CDS
AGCATTGGGAAGTGTAGGAG+GGG 0.588416 8_2:-53746750 Msa1255280:CDS
TTGGCCGGTTAATGCAGCTA+TGG 0.591965 8_2:+53743478 None:intergenic
TTTCAGCCTATGCTAATGCT+AGG 0.600746 8_2:-53746257 Msa1255280:CDS
CAACCGTGTATTACAATCTG+AGG 0.602134 8_2:-53746334 Msa1255280:CDS
TTTGGTTGGAGAATTGTCGT+AGG 0.615183 8_2:-53746797 Msa1255280:CDS
TGGAAAATGAAGAATATATG+GGG 0.615202 8_2:-53743175 Msa1255280:CDS
AATATACTAACACTTAGAGA+GGG 0.620159 8_2:+53746658 None:intergenic
TTATCTTTCTCACCACATGT+TGG 0.621904 8_2:+53743459 None:intergenic
GAATGAGTTTGTACCTGAGG+AGG 0.622331 8_2:+53743969 None:intergenic
AAATATACTAACACTTAGAG+AGG 0.625688 8_2:+53746657 None:intergenic
ATAATATTGTACCACTGACA+TGG 0.629151 8_2:+53743668 None:intergenic
CTAATGCTAGGAATTAGCAT+TGG 0.634658 8_2:-53746245 Msa1255280:CDS
ACTAGAGTAATTGCATCAAG+GGG 0.654446 8_2:-53744125 Msa1255280:CDS
TTTGACAATCTCTGCCACCA+TGG 0.655124 8_2:-53743152 Msa1255280:CDS
TGGGGTGGGAATAGGCAACA+TGG 0.656926 8_2:-53743207 Msa1255280:CDS
GTATGATTACAGGAGCAGCT+GGG 0.686475 8_2:-53746358 Msa1255280:CDS
AAGCCTCAGATTGTAATACA+CGG 0.701059 8_2:+53746331 None:intergenic
ATATTGTACCACTGACATGG+AGG 0.737557 8_2:+53743671 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGTAAATATTATATATATT+TGG - chr8_2:53745326-53745345 Msa1255280:intron 10.0%
!! TAAATCCTTAAAAAAATTTA+TGG - chr8_2:53745869-53745888 Msa1255280:intron 10.0%
!!! AAAAACCATAAATTTTTTTA+AGG + chr8_2:53745877-53745896 None:intergenic 10.0%
!!! TTATTGTATTTTGTTGATTT+CGG - chr8_2:53744089-53744108 Msa1255280:CDS 15.0%
!! ATAGTTCTTAATTTAACATT+TGG - chr8_2:53744859-53744878 Msa1255280:intron 15.0%
!!! TAATTTATAACTTGCTTTTT+TGG - chr8_2:53745734-53745753 Msa1255280:CDS 15.0%
!! ATCTTAAAAAAAAACTGAAA+GGG + chr8_2:53746404-53746423 None:intergenic 15.0%
!! TATCTTAAAAAAAAACTGAA+AGG + chr8_2:53746405-53746424 None:intergenic 15.0%
!! TTAAACTTTCTATCATAAAT+GGG + chr8_2:53746867-53746886 None:intergenic 15.0%
!!! TAAATTTTATCCTTACTTTA+TGG + chr8_2:53746890-53746909 None:intergenic 15.0%
!!! AGTAAGGATAAAATTTATTT+TGG - chr8_2:53746893-53746912 Msa1255280:intron 15.0%
!! AATATGTAGAAAATTTAGAA+AGG + chr8_2:53747121-53747140 None:intergenic 15.0%
!!! ACATAAAAACAATTTTAAGA+TGG + chr8_2:53747192-53747211 None:intergenic 15.0%
!! AATAACTACATAATGCAATA+TGG + chr8_2:53744074-53744093 None:intergenic 20.0%
!! GTTCTTGAAAAAATTGAATT+TGG + chr8_2:53744340-53744359 None:intergenic 20.0%
!! AAAGGAAACAATTATGAAAA+AGG - chr8_2:53744435-53744454 Msa1255280:intron 20.0%
!! TTAATTAACACAAATAAGAG+AGG - chr8_2:53744835-53744854 Msa1255280:intron 20.0%
!! TTCTTAAGGTAGTTAATATT+TGG - chr8_2:53745173-53745192 Msa1255280:intron 20.0%
!! ATATATAATATTTACCTGCA+AGG + chr8_2:53745323-53745342 None:intergenic 20.0%
!!! TACTACTATATCACAATTTT+TGG + chr8_2:53745438-53745457 None:intergenic 20.0%
!! TGATATAGTAGTATACATAA+AGG - chr8_2:53745445-53745464 Msa1255280:CDS 20.0%
!!! AATTAATTGTGATTTGTTGA+CGG + chr8_2:53745543-53745562 None:intergenic 20.0%
!! TTAATAAGAGAAATGTTAAC+CGG - chr8_2:53745601-53745620 Msa1255280:intron 20.0%
!!! CCTTTTTTAGTATTCTTAAT+CGG + chr8_2:53745639-53745658 None:intergenic 20.0%
!! ACTAAAATACATATCTTGAT+TGG - chr8_2:53745899-53745918 Msa1255280:intron 20.0%
!!! TTGATGAATATTTTTGAATG+TGG - chr8_2:53746430-53746449 Msa1255280:intron 20.0%
!!! ATATATTGTTTCTTACCATA+GGG + chr8_2:53746546-53746565 None:intergenic 20.0%
!!! TATATATTGTTTCTTACCAT+AGG + chr8_2:53746547-53746566 None:intergenic 20.0%
!! GTTAAACTTTCTATCATAAA+TGG + chr8_2:53746868-53746887 None:intergenic 20.0%
!! ATGGAAAATGAAGAATATAT+GGG - chr8_2:53746991-53747010 Msa1255280:CDS 20.0%
!!! TGTTTTTATGTGTTTTTGTT+TGG - chr8_2:53747201-53747220 Msa1255280:five_prime_UTR 20.0%
!! TTTTTCATGACAACTATTTC+TGG + chr8_2:53743167-53743186 None:intergenic 25.0%
! TGAAAAAAAGAAGTTTCTTC+TGG - chr8_2:53743180-53743199 Msa1255280:CDS 25.0%
! TTGACATGATGTTATGAAAT+TGG - chr8_2:53743306-53743325 Msa1255280:intron 25.0%
! AATATACTAACACTTAGAGA+GGG + chr8_2:53743512-53743531 None:intergenic 25.0%
! AAATATACTAACACTTAGAG+AGG + chr8_2:53743513-53743532 None:intergenic 25.0%
!! ACTATTTTGTATGCGAAAAA+TGG - chr8_2:53743611-53743630 Msa1255280:intron 25.0%
! AGAACTTTCGAAAATGAATT+GGG + chr8_2:53743754-53743773 None:intergenic 25.0%
! AAGAACTTTCGAAAATGAAT+TGG + chr8_2:53743755-53743774 None:intergenic 25.0%
! GAATAGAATGATAAGCAAAA+TGG + chr8_2:53743986-53744005 None:intergenic 25.0%
! TTGCTTATCATTCTATTCAT+CGG - chr8_2:53743988-53744007 Msa1255280:CDS 25.0%
! TACTCTTACTATAAAGTAGA+AGG + chr8_2:53744668-53744687 None:intergenic 25.0%
! TATCAGTTCTTATGTATGTT+TGG - chr8_2:53745128-53745147 Msa1255280:intron 25.0%
! ATCAGTTCTTATGTATGTTT+GGG - chr8_2:53745129-53745148 Msa1255280:intron 25.0%
! TCTCATTGTTCAAATTCTTA+AGG - chr8_2:53745159-53745178 Msa1255280:intron 25.0%
! AGTTGTATAACTTCATAGAT+TGG - chr8_2:53745387-53745406 Msa1255280:intron 25.0%
!!! ACAATTTTTGGTCTTTTAAC+AGG + chr8_2:53745426-53745445 None:intergenic 25.0%
! TAATACAAATGTTCCTATGT+AGG + chr8_2:53745476-53745495 None:intergenic 25.0%
!!! GGTGTAAATTTTTTTACATC+AGG + chr8_2:53745522-53745541 None:intergenic 25.0%
! CCGATTAAGAATACTAAAAA+AGG - chr8_2:53745636-53745655 Msa1255280:intron 25.0%
!!! CATAATACTATTTCTATGCA+AGG - chr8_2:53745928-53745947 Msa1255280:intron 25.0%
!!! GTGTGCTATTTATCAATTTA+AGG - chr8_2:53745966-53745985 Msa1255280:intron 25.0%
! CTCAATCGAATATATTAATG+AGG - chr8_2:53746269-53746288 Msa1255280:CDS 25.0%
!!! ATTATTTTACAACTGTTTCG+AGG + chr8_2:53746352-53746371 None:intergenic 25.0%
!!! TGAATATTTTTGAATGTGGT+AGG - chr8_2:53746434-53746453 Msa1255280:intron 25.0%
! GAATGTAGATATGATGATAT+TGG - chr8_2:53746570-53746589 Msa1255280:intron 25.0%
! AGAAAGATAATTGCTATCTT+TGG - chr8_2:53746721-53746740 Msa1255280:CDS 25.0%
! GAAAGTTTAACCATAAAGTA+AGG - chr8_2:53746877-53746896 Msa1255280:intron 25.0%
!! TAGTAACAATGTCTCATTTT+TGG - chr8_2:53746927-53746946 Msa1255280:intron 25.0%
! GATGGAAAATGAAGAATATA+TGG - chr8_2:53746990-53747009 Msa1255280:CDS 25.0%
! TGGAAAATGAAGAATATATG+GGG - chr8_2:53746992-53747011 Msa1255280:CDS 25.0%
! TAAACGGTATGTTACATAAT+TGG + chr8_2:53747267-53747286 None:intergenic 25.0%
! ATATATTGCACTTCAAACTA+TGG + chr8_2:53747293-53747312 None:intergenic 25.0%
! TTCAAAATGCTGGTTATTCT+AGG + chr8_2:53742939-53742958 None:intergenic 30.0%
!!! CTACTACTTTTTCAAAATGC+TGG + chr8_2:53742949-53742968 None:intergenic 30.0%
! TGAACGGTTTGAAACAAAAT+AGG + chr8_2:53743015-53743034 None:intergenic 30.0%
!! GAGAAGCATCAACAATTATA+TGG - chr8_2:53743072-53743091 Msa1255280:three_prime_UTR 30.0%
! AAAGTGTTTGATAAACTCAC+AGG + chr8_2:53743239-53743258 None:intergenic 30.0%
!!! GGTTCTATTGTTGGATTTTT+TGG - chr8_2:53743391-53743410 Msa1255280:CDS 30.0%
CATGTTAGATATTCGATGTT+TGG - chr8_2:53743553-53743572 Msa1255280:intron 30.0%
GAAAGTTCTTTCAAATACTC+TGG - chr8_2:53743765-53743784 Msa1255280:intron 30.0%
GCAAGATCATAATCTATAAG+TGG + chr8_2:53743883-53743902 None:intergenic 30.0%
! TTAATGTCATGTTTGCTGAT+TGG - chr8_2:53743953-53743972 Msa1255280:intron 30.0%
AACTACATAATGCAATATGG+TGG + chr8_2:53744071-53744090 None:intergenic 30.0%
AAATCTAGACAGTTTGATGT+CGG - chr8_2:53744242-53744261 Msa1255280:intron 30.0%
!! TAGATTTTAACGCATATAGG+TGG + chr8_2:53744276-53744295 None:intergenic 30.0%
!! TGCTAGATTTTAACGCATAT+AGG + chr8_2:53744279-53744298 None:intergenic 30.0%
!! AGGTAAACTTATAGCTTGTT+TGG - chr8_2:53744455-53744474 Msa1255280:intron 30.0%
! ATAGTAGCTTTTCCAAATCA+CGG + chr8_2:53744526-53744545 None:intergenic 30.0%
ATATGTAGCTTCACTGTAAA+CGG - chr8_2:53744544-53744563 Msa1255280:intron 30.0%
TAACTATATAAGCCTGTGTT+TGG + chr8_2:53744616-53744635 None:intergenic 30.0%
TGTAATAACTGGAAGTTTGT+AGG + chr8_2:53744770-53744789 None:intergenic 30.0%
TTCCAGTTATTACATGTAGA+TGG - chr8_2:53744776-53744795 Msa1255280:intron 30.0%
!! TTCAGAAGCATCTGATATAA+GGG + chr8_2:53744937-53744956 None:intergenic 30.0%
TGAAGAGGTAATTATTTCCA+AGG - chr8_2:53744992-53745011 Msa1255280:intron 30.0%
GAAGAGGTAATTATTTCCAA+GGG - chr8_2:53744993-53745012 Msa1255280:intron 30.0%
ACTCTCTATAAAGAATGATC+TGG + chr8_2:53745023-53745042 None:intergenic 30.0%
TCTTTATAGAGAGTTCATTG+AGG - chr8_2:53745029-53745048 Msa1255280:CDS 30.0%
TATGTTAAATTCTTGTGTGC+AGG - chr8_2:53745072-53745091 Msa1255280:CDS 30.0%
AGTGAATGTTGTCAAGTAAA+GGG + chr8_2:53745099-53745118 None:intergenic 30.0%
! AAACTTGTTCCATAGAGTAT+TGG - chr8_2:53745287-53745306 Msa1255280:intron 30.0%
ATTAAGAAGCCAATACTCTA+TGG + chr8_2:53745299-53745318 None:intergenic 30.0%
CATAAAGGTTTATCCTACAT+AGG - chr8_2:53745460-53745479 Msa1255280:CDS 30.0%
!! TAAAAAAGTGTCATGCTAAC+CGG + chr8_2:53745785-53745804 None:intergenic 30.0%
AGTGTAACAGAAATTGCAAT+AGG + chr8_2:53745994-53746013 None:intergenic 30.0%
AACTAGAGTAATTGCATCAA+GGG - chr8_2:53746041-53746060 Msa1255280:intron 30.0%
ATTCCCAATTCCAAAAACAA+TGG + chr8_2:53746177-53746196 None:intergenic 30.0%
CGAATATATTAATGAGGTCT+CGG - chr8_2:53746275-53746294 Msa1255280:CDS 30.0%
ATAATATTGTACCACTGACA+TGG + chr8_2:53746502-53746521 None:intergenic 30.0%
AACTTTCTATCATAAATGGG+TGG + chr8_2:53746864-53746883 None:intergenic 30.0%
!!! AAACCCCAAATTTTTTTCCA+TGG + chr8_2:53747035-53747054 None:intergenic 30.0%
CTTCAAACTATGGTCATAAA+CGG + chr8_2:53747283-53747302 None:intergenic 30.0%
TGTTTCAAACCGTTCATACA+TGG - chr8_2:53743019-53743038 Msa1255280:three_prime_UTR 35.0%
GGCTTTCGAAGTTAAAAAGA+AGG - chr8_2:53743040-53743059 Msa1255280:three_prime_UTR 35.0%
!! CAATTATATGGCTAGTTTCG+TGG - chr8_2:53743084-53743103 Msa1255280:three_prime_UTR 35.0%
TTCGTCTTCGAAAACTCTTT+CGG + chr8_2:53743141-53743160 None:intergenic 35.0%
AGTCTTCATATGAACGTGTT+TGG - chr8_2:53743213-53743232 Msa1255280:intron 35.0%
!! TTGGTGATGATGCATTGTAA+TGG - chr8_2:53743325-53743344 Msa1255280:intron 35.0%
!!! TTGTAATGGTTTTGTTGAGC+AGG - chr8_2:53743339-53743358 Msa1255280:intron 35.0%
ATTGTCGTAGGTTCTATTGT+TGG - chr8_2:53743382-53743401 Msa1255280:intron 35.0%
CAATGATCAAAGTGAGCATA+GGG + chr8_2:53743465-53743484 None:intergenic 35.0%
AAGCTACAAATAGTAGCATG+TGG - chr8_2:53743636-53743655 Msa1255280:intron 35.0%
TACAAATAGTAGCATGTGGT+TGG - chr8_2:53743640-53743659 Msa1255280:CDS 35.0%
GAATGCATGTATTGTGTGTT+TGG + chr8_2:53743708-53743727 None:intergenic 35.0%
GTTATTGCAGGTATGATTAC+AGG - chr8_2:53743799-53743818 Msa1255280:intron 35.0%
AAGCCTCAGATTGTAATACA+CGG + chr8_2:53743839-53743858 None:intergenic 35.0%
CTAATTCCTAGCATTAGCAT+AGG + chr8_2:53743919-53743938 None:intergenic 35.0%
CTAATGCTAGGAATTAGCAT+TGG - chr8_2:53743922-53743941 Msa1255280:intron 35.0%
! TCCACTAAAGCTTTAGTCAA+AGG - chr8_2:53744397-53744416 Msa1255280:intron 35.0%
!! TTATAGCTTGTTTGGATGTG+CGG - chr8_2:53744463-53744482 Msa1255280:intron 35.0%
TATGTAGCTTCACTGTAAAC+GGG - chr8_2:53744545-53744564 Msa1255280:intron 35.0%
TACTATGCTACTGAACTTTC+AGG - chr8_2:53744686-53744705 Msa1255280:intron 35.0%
AGAACCTGATTCCAACATTT+GGG + chr8_2:53744730-53744749 None:intergenic 35.0%
TAGAACCTGATTCCAACATT+TGG + chr8_2:53744731-53744750 None:intergenic 35.0%
AGCCATCTACATGTAATAAC+TGG + chr8_2:53744781-53744800 None:intergenic 35.0%
!! TCAGAAGCATCTGATATAAG+GGG + chr8_2:53744936-53744955 None:intergenic 35.0%
!! CTTCAGAAGCATCTGATATA+AGG + chr8_2:53744938-53744957 None:intergenic 35.0%
CAGTGAATGTTGTCAAGTAA+AGG + chr8_2:53745100-53745119 None:intergenic 35.0%
CTTTACTTGACAACATTCAC+TGG - chr8_2:53745098-53745117 Msa1255280:intron 35.0%
AGTTCTTATGTATGTTTGGG+TGG - chr8_2:53745132-53745151 Msa1255280:intron 35.0%
! AGTATTCTTAATCGGTGTTC+CGG + chr8_2:53745631-53745650 None:intergenic 35.0%
TGCAAGGTCTAACTGAAATT+TGG - chr8_2:53745944-53745963 Msa1255280:intron 35.0%
AGTTCCTTTGCATAAGCATA+TGG + chr8_2:53746025-53746044 None:intergenic 35.0%
GAACTAGAGTAATTGCATCA+AGG - chr8_2:53746040-53746059 Msa1255280:intron 35.0%
ACTAGAGTAATTGCATCAAG+GGG - chr8_2:53746042-53746061 Msa1255280:intron 35.0%
ATAATAGCTGGTATGGTTAG+TGG - chr8_2:53746117-53746136 Msa1255280:intron 35.0%
!!! CATTTTGGGACCATTGTTTT+TGG - chr8_2:53746164-53746183 Msa1255280:intron 35.0%
!!! GGACCATTGTTTTTGGAATT+GGG - chr8_2:53746171-53746190 Msa1255280:intron 35.0%
AATGAATGAGTTTGTACCTG+AGG + chr8_2:53746204-53746223 None:intergenic 35.0%
TTAATGAGGTCTCGGTTTAA+TGG - chr8_2:53746283-53746302 Msa1255280:CDS 35.0%
! TGCTACATCAACTTTTGCTA+TGG - chr8_2:53746464-53746483 Msa1255280:intron 35.0%
TTATCTTTCTCACCACATGT+TGG + chr8_2:53746711-53746730 None:intergenic 35.0%
TGCCACCATGGAAAAAAATT+TGG - chr8_2:53747027-53747046 Msa1255280:CDS 35.0%
GCCACCATGGAAAAAAATTT+GGG - chr8_2:53747028-53747047 Msa1255280:CDS 35.0%
CCACCATGGAAAAAAATTTG+GGG - chr8_2:53747029-53747048 Msa1255280:CDS 35.0%
CATTGTACATGAGAATGAGT+AGG + chr8_2:53747322-53747341 None:intergenic 35.0%
CTTCGAAAGCCATGTATGAA+CGG + chr8_2:53743031-53743050 None:intergenic 40.0%
AGAAGTTTCTTCTGGTACAG+TGG - chr8_2:53743188-53743207 Msa1255280:CDS 40.0%
GTTGAGCAGGAAATGAAGTT+TGG - chr8_2:53743352-53743371 Msa1255280:intron 40.0%
AGCAGGAAATGAAGTTTGGT+TGG - chr8_2:53743356-53743375 Msa1255280:intron 40.0%
TTTGGTTGGAGAATTGTCGT+AGG - chr8_2:53743370-53743389 Msa1255280:intron 40.0%
!!! TGGATTTTTTGGAGCAGCAT+TGG - chr8_2:53743402-53743421 Msa1255280:CDS 40.0%
!!! GGATTTTTTGGAGCAGCATT+GGG - chr8_2:53743403-53743422 Msa1255280:CDS 40.0%
CCAATGATCAAAGTGAGCAT+AGG + chr8_2:53743466-53743485 None:intergenic 40.0%
CCTATGCTCACTTTGATCAT+TGG - chr8_2:53743463-53743482 Msa1255280:CDS 40.0%
TTCATATAGCTTCTGAACCG+CGG + chr8_2:53743666-53743685 None:intergenic 40.0%
! TATGAACTAGCTTCTGAACG+CGG - chr8_2:53743680-53743699 Msa1255280:CDS 40.0%
!! GCTGCTATCTTTGTTATTGC+AGG - chr8_2:53743787-53743806 Msa1255280:intron 40.0%
CAACCGTGTATTACAATCTG+AGG - chr8_2:53743833-53743852 Msa1255280:intron 40.0%
TAAGTGGCATGTCTAGTGTT+GGG + chr8_2:53743867-53743886 None:intergenic 40.0%
ATAAGTGGCATGTCTAGTGT+TGG + chr8_2:53743868-53743887 None:intergenic 40.0%
TTTCAGCCTATGCTAATGCT+AGG - chr8_2:53743910-53743929 Msa1255280:intron 40.0%
! TGTCATGTTTGCTGATTGGA+TGG - chr8_2:53743957-53743976 Msa1255280:intron 40.0%
GTGAATGCTTTGTATTGCTC+AGG + chr8_2:53744119-53744138 None:intergenic 40.0%
AGTGACCGATGAATTGAGAT+CGG - chr8_2:53744161-53744180 Msa1255280:CDS 40.0%
! TATCCAGTTGATGCAACACA+TGG - chr8_2:53744363-53744382 Msa1255280:intron 40.0%
TTGATGCAACACATGGTGAT+AGG - chr8_2:53744370-53744389 Msa1255280:intron 40.0%
! GCCTTTGACTAAAGCTTTAG+TGG + chr8_2:53744401-53744420 None:intergenic 40.0%
!! TAGTCAAAGGCATCGATACA+TGG - chr8_2:53744410-53744429 Msa1255280:intron 40.0%
!! AGGCATCGATACATGGAAAA+AGG - chr8_2:53744417-53744436 Msa1255280:intron 40.0%
! ATCACGGCAATTTTTGCCTT+GGG + chr8_2:53744510-53744529 None:intergenic 40.0%
! AATCACGGCAATTTTTGCCT+TGG + chr8_2:53744511-53744530 None:intergenic 40.0%
AGGCAAAAATTGCCGTGATT+TGG - chr8_2:53744511-53744530 Msa1255280:intron 40.0%
ATGTAGCTTCACTGTAAACG+GGG - chr8_2:53744546-53744565 Msa1255280:intron 40.0%
ACGGTACAATTTCCACATCA+AGG + chr8_2:53744589-53744608 None:intergenic 40.0%
GTTTGTAGGCACTTACAATC+AGG + chr8_2:53744756-53744775 None:intergenic 40.0%
TCTTCATCTTGTAGATCAGC+TGG + chr8_2:53744978-53744997 None:intergenic 40.0%
AGCTGATCTACAAGATGAAG+AGG - chr8_2:53744977-53744996 Msa1255280:intron 40.0%
AGAATGATCTGGAAAACCCT+TGG + chr8_2:53745012-53745031 None:intergenic 40.0%
ACTTGACAACATTCACTGGA+AGG - chr8_2:53745102-53745121 Msa1255280:intron 40.0%
TTGGCTTCTTAATTCCTTGC+AGG - chr8_2:53745306-53745325 Msa1255280:intron 40.0%
! GTATTCTTAATCGGTGTTCC+GGG + chr8_2:53745630-53745649 None:intergenic 40.0%
GAAGCCATATGCTTATGCAA+AGG - chr8_2:53746018-53746037 Msa1255280:intron 40.0%
AGTAATTGCATCAAGGGGAA+AGG - chr8_2:53746047-53746066 Msa1255280:intron 40.0%
ATCTGTCTTTACTGCTTCTG+TGG - chr8_2:53746093-53746112 Msa1255280:intron 40.0%
TGCTTCTGTGGAATAATAGC+TGG - chr8_2:53746105-53746124 Msa1255280:intron 40.0%
CTGTGGAATAATAGCTGGTA+TGG - chr8_2:53746110-53746129 Msa1255280:intron 40.0%
!!! GGGACCATTGTTTTTGGAAT+TGG - chr8_2:53746170-53746189 Msa1255280:intron 40.0%
ATATTGTACCACTGACATGG+AGG + chr8_2:53746499-53746518 None:intergenic 40.0%
! GTTTCTTACCATAGGGTACT+GGG + chr8_2:53746539-53746558 None:intergenic 40.0%
TGTTTCTTACCATAGGGTAC+TGG + chr8_2:53746540-53746559 None:intergenic 40.0%
ACTGATTGCGCTCACAAAAA+TGG + chr8_2:53746782-53746801 None:intergenic 40.0%
TTTGTGAGCGCAATCAGTTT+AGG - chr8_2:53746784-53746803 Msa1255280:CDS 40.0%
!!! GTCTCATTTTTGGCTATCAC+AGG - chr8_2:53746937-53746956 Msa1255280:intron 40.0%
!!! TCATTTTTGGCTATCACAGG+TGG - chr8_2:53746940-53746959 Msa1255280:intron 40.0%
!!! CATTTTTGGCTATCACAGGT+GGG - chr8_2:53746941-53746960 Msa1255280:intron 40.0%
!!! ATTTTTGGCTATCACAGGTG+GGG - chr8_2:53746942-53746961 Msa1255280:intron 40.0%
!!! CCCCAAATTTTTTTCCATGG+TGG + chr8_2:53747032-53747051 None:intergenic 40.0%
GCAGATTGTGTAACAATGAC+TGG - chr8_2:53747153-53747172 Msa1255280:five_prime_UTR 40.0%
GTATGATTACAGGAGCAGCT+GGG - chr8_2:53743809-53743828 Msa1255280:intron 45.0%
ACCGATGAATTGAGATCGGA+CGG - chr8_2:53744165-53744184 Msa1255280:CDS 45.0%
ACCGTCCGATCTCAATTCAT+CGG + chr8_2:53744169-53744188 None:intergenic 45.0%
TAACGCATATAGGTGGTCGT+TGG + chr8_2:53744269-53744288 None:intergenic 45.0%
TCACCATGTGTTGCATCAAC+TGG + chr8_2:53744369-53744388 None:intergenic 45.0%
TCCACATCAAGGCAAAAGCA+CGG + chr8_2:53744578-53744597 None:intergenic 45.0%
!! TAAGCCTGTGTTTGGCTCTA+CGG + chr8_2:53744608-53744627 None:intergenic 45.0%
GAACTTTCAGGAAGCCTTTG+AGG - chr8_2:53744698-53744717 Msa1255280:intron 45.0%
AGAAATGTTAACCGGTGTCC+CGG - chr8_2:53745609-53745628 Msa1255280:intron 45.0%
CAAGGGGAAAGGAAATCACT+TGG - chr8_2:53746058-53746077 Msa1255280:intron 45.0%
!! GGTATGGTTAGTGGTTTGCT+TGG - chr8_2:53746126-53746145 Msa1255280:intron 45.0%
!! GTTAGTGGTTTGCTTGGTCT+AGG - chr8_2:53746132-53746151 Msa1255280:intron 45.0%
! TCTAGGAGGTGGCTTCATTT+TGG - chr8_2:53746149-53746168 Msa1255280:intron 45.0%
! CTAGGAGGTGGCTTCATTTT+GGG - chr8_2:53746150-53746169 Msa1255280:intron 45.0%
GAATGAGTTTGTACCTGAGG+AGG + chr8_2:53746201-53746220 None:intergenic 45.0%
TTTCTCTTCCTCCATGTCAG+TGG - chr8_2:53746488-53746507 Msa1255280:intron 45.0%
GCAACCATAGCTGCATTAAC+CGG - chr8_2:53746685-53746704 Msa1255280:CDS 45.0%
AGGCAACATGGTTGAGAAGA+TGG - chr8_2:53746972-53746991 Msa1255280:CDS 45.0%
TTTGACAATCTCTGCCACCA+TGG - chr8_2:53747015-53747034 Msa1255280:CDS 45.0%
!!! TTTTGTATTTTTTTTTTTTT+TGG + chr8_2:53742976-53742995 None:intergenic 5.0%
! CAGCATTGGGAAGTGTAGGA+GGG - chr8_2:53743416-53743435 Msa1255280:CDS 50.0%
! AGCATTGGGAAGTGTAGGAG+GGG - chr8_2:53743417-53743436 Msa1255280:CDS 50.0%
GAGAGGGCTGTAGAAGACTT+TGG + chr8_2:53743496-53743515 None:intergenic 50.0%
GGTATGATTACAGGAGCAGC+TGG - chr8_2:53743808-53743827 Msa1255280:intron 50.0%
!! TAGCTTGTTTGGATGTGCGG+TGG - chr8_2:53744466-53744485 Msa1255280:intron 50.0%
TGTACCGTAGAGCCAAACAC+AGG - chr8_2:53744601-53744620 Msa1255280:intron 50.0%
CATTTGGGCTGCTTCCTCAA+AGG + chr8_2:53744715-53744734 None:intergenic 50.0%
TGAGGAAGCAGCCCAAATGT+TGG - chr8_2:53744716-53744735 Msa1255280:intron 50.0%
GCAGCCCAAATGTTGGAATC+AGG - chr8_2:53744723-53744742 Msa1255280:intron 50.0%
GTATCCTTAACCAGTGCCCA+GGG - chr8_2:53745756-53745775 Msa1255280:CDS 50.0%
!! AGTGGTTTGCTTGGTCTAGG+AGG - chr8_2:53746135-53746154 Msa1255280:intron 50.0%
GGAATTGGGAATTCCTCCTC+AGG - chr8_2:53746185-53746204 Msa1255280:CDS 50.0%
TTGGCCGGTTAATGCAGCTA+TGG + chr8_2:53746692-53746711 None:intergenic 50.0%
TGCATTAACCGGCCAACATG+TGG - chr8_2:53746696-53746715 Msa1255280:CDS 50.0%
CTTTCTCACCACATGTTGGC+CGG + chr8_2:53746707-53746726 None:intergenic 50.0%
! GGAGCAGCATTGGGAAGTGT+AGG - chr8_2:53743412-53743431 Msa1255280:CDS 55.0%
! GCAGCATTGGGAAGTGTAGG+AGG - chr8_2:53743415-53743434 Msa1255280:CDS 55.0%
! TTGGGAAGTGTAGGAGGGGT+AGG - chr8_2:53743421-53743440 Msa1255280:CDS 55.0%
! TAGTAGCATGTGGTTGGCCG+CGG - chr8_2:53743646-53743665 Msa1255280:CDS 55.0%
! CATCAAGGCAAAAGCACGGC+AGG + chr8_2:53744574-53744593 None:intergenic 55.0%
! GCCGTGCTTTTGCCTTGATG+TGG - chr8_2:53744574-53744593 Msa1255280:intron 55.0%
! TAATCGGTGTTCCGGGACAC+CGG + chr8_2:53745623-53745642 None:intergenic 55.0%
GGTATCCTTAACCAGTGCCC+AGG - chr8_2:53745755-53745774 Msa1255280:CDS 55.0%
TCATGCTAACCGGTGTCCCT+GGG + chr8_2:53745775-53745794 None:intergenic 55.0%
! GGTTTGCTTGGTCTAGGAGG+TGG - chr8_2:53746138-53746157 Msa1255280:intron 55.0%
GATCGCTTCCCAGTACCCTA+TGG - chr8_2:53746528-53746547 Msa1255280:intron 55.0%
TTTGGCTATCACAGGTGGGG+TGG - chr8_2:53746945-53746964 Msa1255280:intron 55.0%
TTGGCTATCACAGGTGGGGT+GGG - chr8_2:53746946-53746965 Msa1255280:intron 55.0%
ATCACAGGTGGGGTGGGAAT+AGG - chr8_2:53746952-53746971 Msa1255280:CDS 55.0%
TGGGGTGGGAATAGGCAACA+TGG - chr8_2:53746960-53746979 Msa1255280:CDS 55.0%
! GGAAGTGTAGGAGGGGTAGG+AGG - chr8_2:53743424-53743443 Msa1255280:CDS 60.0%
AGTGTAGGAGGGGTAGGAGG+TGG - chr8_2:53743427-53743446 Msa1255280:CDS 60.0%
! GCAGCTTTTCTCGCGTCCCA+AGG - chr8_2:53744491-53744510 Msa1255280:intron 60.0%
!! GTGTCCCTGGGCACTGGTTA+AGG + chr8_2:53745763-53745782 None:intergenic 60.0%
TAACCAGTGCCCAGGGACAC+CGG - chr8_2:53745763-53745782 Msa1255280:CDS 60.0%
GTCATGCTAACCGGTGTCCC+TGG + chr8_2:53745776-53745795 None:intergenic 60.0%
GTAGGAGGGGTAGGAGGTGG+AGG - chr8_2:53743430-53743449 Msa1255280:CDS 65.0%
TAACCGGTGTCCCTGGGCAC+TGG + chr8_2:53745769-53745788 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 53742844 53747345 53742844 ID=Msa1255280;Name=Msa1255280
chr8_2 mRNA 53742844 53747345 53742844 ID=Msa1255280-mRNA-1;Parent=Msa1255280;Name=Msa1255280-mRNA-1;_AED=0.19;_eAED=0.19;_QI=194|1|1|1|1|1|12|289|473
chr8_2 exon 53742844 53743230 53742844 ID=Msa1255280-mRNA-1:exon:16678;Parent=Msa1255280-mRNA-1
chr8_2 exon 53743384 53743524 53743384 ID=Msa1255280-mRNA-1:exon:16677;Parent=Msa1255280-mRNA-1
chr8_2 exon 53743640 53743733 53743640 ID=Msa1255280-mRNA-1:exon:16676;Parent=Msa1255280-mRNA-1
chr8_2 exon 53743983 53744201 53743983 ID=Msa1255280-mRNA-1:exon:16675;Parent=Msa1255280-mRNA-1
chr8_2 exon 53744862 53744912 53744862 ID=Msa1255280-mRNA-1:exon:16674;Parent=Msa1255280-mRNA-1
chr8_2 exon 53745009 53745095 53745009 ID=Msa1255280-mRNA-1:exon:16673;Parent=Msa1255280-mRNA-1
chr8_2 exon 53745191 53745243 53745191 ID=Msa1255280-mRNA-1:exon:16672;Parent=Msa1255280-mRNA-1
chr8_2 exon 53745430 53745481 53745430 ID=Msa1255280-mRNA-1:exon:16671;Parent=Msa1255280-mRNA-1
chr8_2 exon 53745733 53745797 53745733 ID=Msa1255280-mRNA-1:exon:16670;Parent=Msa1255280-mRNA-1
chr8_2 exon 53746180 53746380 53746180 ID=Msa1255280-mRNA-1:exon:16669;Parent=Msa1255280-mRNA-1
chr8_2 exon 53746669 53746828 53746669 ID=Msa1255280-mRNA-1:exon:16668;Parent=Msa1255280-mRNA-1
chr8_2 exon 53746951 53747345 53746951 ID=Msa1255280-mRNA-1:exon:16667;Parent=Msa1255280-mRNA-1
chr8_2 five_prime_UTR 53747152 53747345 53747152 ID=Msa1255280-mRNA-1:five_prime_utr;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53746951 53747151 53746951 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53746669 53746828 53746669 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53746180 53746380 53746180 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53745733 53745797 53745733 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53745430 53745481 53745430 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53745191 53745243 53745191 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53745009 53745095 53745009 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53744862 53744912 53744862 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53743983 53744201 53743983 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53743640 53743733 53743640 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53743384 53743524 53743384 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 CDS 53743133 53743230 53743133 ID=Msa1255280-mRNA-1:cds;Parent=Msa1255280-mRNA-1
chr8_2 three_prime_UTR 53742844 53743132 53742844 ID=Msa1255280-mRNA-1:three_prime_utr;Parent=Msa1255280-mRNA-1
Gene Sequence

>Msa1255280

ATGGCTTTCGAAGTTAAAAAGAAGGCGATATCAAGAGAAGCATCAACAATTATATGGCTAGTTTCGTGGAGTCTAATTATGATCTATCATGTTAGTTTAGCCGAAAGAGTTTTCGAAGACGAAAAACCAGAAATAGTTGTCATGAAAAAAAGAAGTTTCTTCTGGTACAGTGGAGAGTCTTCATATGAACGTGTTTGGCCTGAAATGAAGTTTGGTTGGAGAATTGTCGTAGGTTCTATTGTTGGATTTTTTGGAGCAGCATTGGGAAGTGTAGGAGGGGTAGGAGGTGGAGGAATTTTTATCCCTATGCTCACTTTGATCATTGGTTTTGATCCAAAGTCTTCTACAGCCCTCTCTAAGTGTATGATTACAGGAGCAGCTGGGTCAACCGTGTATTACAATCTGAGGCTTAGACACCCAACACTAGACATGCCACTTATAGATTATGATCTTGCTTTGCTCTTTCAGCCTATGCTAATGCTAGGAATTAGCATTGGTGTTGCATTTAATGTCATGTTTGCTGATTGGATGGTTACCATTTTGCTTATCATTCTATTCATCGGTACATCCACTAAAGCTTTAGTCAAAGGCATCGATACATGGAAAAAGGAAACAATTATGAAAAAGGAAGCCTTTGAGGAAGCAGCCCAAATGTTGGAATCAGGTTCTACTCCTGATTATGCTTCTGAAGAAGACTACAAGTCACTACCAGCTGATCTACAAGATGAAGAGGTCCCTTTACTTGACAACATTCACTGGAAGGAGTTATCAGTTCTTATGTATGTTTGGGTGGCTTTTCTCATTGTTCAAATTCTTAAGACTTACAGCAAAACTTGTTCCATAGAGTATTGGCTTCTTAATTCCTTGCAGGTGCCTATTGCAATTTCTGTTACACTTTTTGAAGCCATATGCTTATGCAAAGGAACTAGAGTAATTGCATCAAGGGGAAAGGAAATCACTTGGAAGTTTCATAAGATCTGTCTTTACTGCTTCTGTGGAATAATAGCTGGTATGGTTAGTGGTTTGCTTGGTCTAGGAGGTGGCTTCATTTTGGGACCATTGTTTTTGGAATTGGGAATTCCTCCTCAGGTTGCTAGTGCTACATCAACTTTTGCTATGGTTTTCTCTTCCTCCATGTCAGTGGTACAATATTATCATCTAGATCGCTTCCCAGTACCCTATGCTTCATACTTAGTATTGATTGCAACCATAGCTGCATTAACCGGCCAACATGTGGTGAGAAAGATAATTGCTATCTTTGGTAGAGCATCTATCATCGTCTTCATATTAGCTTTTACCATTTTTGTGAGCGCAATCAGTTTAGGTGGGGTGGGAATAGGCAACATGGTTGAGAAGATGGAAAATGAAGAATATATGGGGTTTGACAATCTCTGCCACCATGGAAAAAAATTTGGGGTTTGA

Protein sequence

>Msa1255280

MAFEVKKKAISREASTIIWLVSWSLIMIYHVSLAERVFEDEKPEIVVMKKRSFFWYSGESSYERVWPEMKFGWRIVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTALSKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTILLIILFIGTSTKALVKGIDTWKKETIMKKEAFEEAAQMLESGSTPDYASEEDYKSLPADLQDEEVPLLDNIHWKELSVLMYVWVAFLIVQILKTYSKTCSIEYWLLNSLQVPIAISVTLFEAICLCKGTRVIASRGKEITWKFHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYHLDRFPVPYASYLVLIATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAISLGGVGIGNMVEKMENEEYMGFDNLCHHGKKFGV*