AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1158540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1158540 MtrunA17_Chr7g0253181 98.873 355 4 0 1 355 1 355 0.0 723
Msa1158540 MtrunA17_Chr6g0461551 25.672 335 232 8 31 354 58 386 1.29e-29 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1158540 AT1G64770.1 59.551 356 134 5 1 354 1 348 1.41e-142 408
Msa1158540 AT1G64770.2 57.732 291 114 4 1 290 1 283 2.14e-106 315
Msa1158540 AT1G64770.3 57.143 294 117 4 1 293 1 286 2.42e-106 316
Msa1158540 AT1G55370.2 24.771 327 206 7 31 353 63 353 1.01e-23 100

Find 98 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATCCTTTGTTATCCATTT+TGG 0.158639 7_4:+47939758 None:intergenic
AAAAGCCTTTGTTCTTTCTT+TGG 0.192458 7_4:+47938245 None:intergenic
CTCTTCTCTTAAATCTAAAA+TGG 0.228276 7_4:+47938490 None:intergenic
CTTACAAACCAAAAGTGTTT+TGG 0.257885 7_4:-47939271 Msa1158540:CDS
CACTGGTCCTGCTTCAATAT+TGG 0.282753 7_4:-47937817 Msa1158540:CDS
TGATGCCATTGATGCTTTAC+AGG 0.286647 7_4:-47939084 Msa1158540:intron
GAGGCACTCAATGAGAAATT+TGG 0.299035 7_4:-47939401 Msa1158540:CDS
CATGAACCTGGCTTCAATTC+AGG 0.299182 7_4:+47938333 None:intergenic
TATTGATATTCTTGTACTAT+AGG 0.302316 7_4:+47937563 None:intergenic
GCCATAGAGAAAACGTAATA+AGG 0.304954 7_4:+47939509 None:intergenic
TCATCTTTCCAAAACACTTT+TGG 0.306270 7_4:+47939263 None:intergenic
ATAGCATTGGTTAGAGTAAC+AGG 0.306294 7_4:+47938519 None:intergenic
AAGAAAAGGCATCAAATTCT+TGG 0.308484 7_4:-47939378 Msa1158540:CDS
AAAGCCTTTGTTCTTTCTTT+GGG 0.310843 7_4:+47938246 None:intergenic
GGTTCCATGTCAGACAAATA+TGG 0.314864 7_4:-47937858 Msa1158540:CDS
TCAATCTAATAGTGTCAAAA+AGG 0.320035 7_4:+47939706 None:intergenic
TACAAAGCTAAAGGTGGAAT+TGG 0.328683 7_4:-47939191 Msa1158540:CDS
TTGGTTAGAGTAACAGGTTT+TGG 0.328743 7_4:+47938525 None:intergenic
TTATTCTCAAGGAGAGTAAT+AGG 0.341075 7_4:+47938294 None:intergenic
AGAGGTGGTGCGGCAATTAA+AGG 0.342398 7_4:-47938471 Msa1158540:CDS
TCTCAAAGGTTGATTTCATT+TGG 0.368709 7_4:-47938363 Msa1158540:CDS
AACATGAATTTCCTTCTTTG+AGG 0.377917 7_4:-47939617 Msa1158540:five_prime_UTR
GTTTAGTTTGGGAAGAGATA+AGG 0.400038 7_4:+47939475 None:intergenic
GATGGAGTCAAGATTTGAAA+AGG 0.400664 7_4:+47938405 None:intergenic
AATGAGAAATTTGGAAGAAA+AGG 0.401880 7_4:-47939392 Msa1158540:CDS
TAAAGACCTGTTTCATTGGC+AGG 0.405736 7_4:+47939212 None:intergenic
AGCTAAAGGTGGAATTGGTT+TGG 0.410266 7_4:-47939186 Msa1158540:CDS
ACAATTCCTGCCAATGAAAC+AGG 0.414802 7_4:-47939218 Msa1158540:CDS
TTTGTAAAGACCTGTTTCAT+TGG 0.415282 7_4:+47939208 None:intergenic
AAAATATGAAATCATTGATC+AGG 0.416361 7_4:-47938205 Msa1158540:intron
TGCTTCCTTCCACTTTAGAA+TGG 0.417981 7_4:-47939127 Msa1158540:CDS
CATTGAATCCCTTAGCACTT+TGG 0.429690 7_4:-47937500 Msa1158540:three_prime_UTR
TTCTACAGAGTGATAAGAAT+GGG 0.429702 7_4:-47937909 Msa1158540:CDS
TAAGATGTTACATGAGCATC+AGG 0.437810 7_4:+47939290 None:intergenic
AGAGAGCAAGAAAGGGTGAA+AGG 0.441533 7_4:+47937680 None:intergenic
GTTGAGCTAACAGTTAGAAA+TGG 0.444856 7_4:-47939335 Msa1158540:CDS
TTGAACTCATGGCTTACTCT+TGG 0.455278 7_4:+47939678 None:intergenic
TATTTGTCTGACATGGAACC+AGG 0.462459 7_4:+47937861 None:intergenic
GCCTTTGTTCTTTCTTTGGG+AGG 0.467470 7_4:+47938249 None:intergenic
AATTTCTCATTGAGTGCCTC+AGG 0.469202 7_4:+47939404 None:intergenic
CTGAATTGAAGCCAGGTTCA+TGG 0.470856 7_4:-47938332 Msa1158540:CDS
AGTGATAAGAATGGGATTTG+AGG 0.471937 7_4:-47937901 Msa1158540:CDS
ACATGTTTGCATTGAACTCA+TGG 0.475418 7_4:+47939667 None:intergenic
TTGTACCTGTAAAGCATCAA+TGG 0.481550 7_4:+47939079 None:intergenic
ATGGAGTCAAGATTTGAAAA+GGG 0.482931 7_4:+47938406 None:intergenic
TTGCCATGCTCACAGGATAG+AGG 0.487005 7_4:+47938574 None:intergenic
CTTTACAGTCCATTCTAAAG+TGG 0.493143 7_4:+47939118 None:intergenic
GAGCCTGTGACTGTGAATCC+TGG 0.502873 7_4:-47937795 Msa1158540:CDS
ACTCATGGCTTACTCTTGGA+TGG 0.504925 7_4:+47939682 None:intergenic
CCTTGTTGAGTCCATGAACC+TGG 0.507008 7_4:+47938321 None:intergenic
GATATTTACGTGTCAAGCCC+TGG 0.509482 7_4:-47937879 Msa1158540:CDS
CACTTTAGAATGGACTGTAA+AGG 0.510876 7_4:-47939117 Msa1158540:CDS
GCTCCTCTGAATTCTTCACC+AGG 0.521135 7_4:+47937777 None:intergenic
GTTCCATGTCAGACAAATAT+GGG 0.524034 7_4:-47937857 Msa1158540:CDS
CTAACTGTTAGCTCAACAAT+GGG 0.524594 7_4:+47939341 None:intergenic
TTTCTACAGAGTGATAAGAA+TGG 0.530231 7_4:-47937910 Msa1158540:CDS
ACTGCTGTTGCCATGCTCAC+AGG 0.530706 7_4:+47938567 None:intergenic
TGAAATCAACCTTTGAGACT+CGG 0.532325 7_4:+47938368 None:intergenic
GAAAAGGGGAAGCAAGAGGA+GGG 0.532333 7_4:+47938421 None:intergenic
ATCGAGGAACCAAAGTGCTA+AGG 0.533102 7_4:+47937491 None:intergenic
AAAATGGCTTAGTATAGCAT+TGG 0.535401 7_4:+47938506 None:intergenic
TCGAGGAACCAAAGTGCTAA+GGG 0.537001 7_4:+47937492 None:intergenic
TCTAACTGTTAGCTCAACAA+TGG 0.537764 7_4:+47939340 None:intergenic
CCTCCCATATTTGTCTGACA+TGG 0.538146 7_4:+47937854 None:intergenic
ACAGGTCTTTACAAAGCTAA+AGG 0.540122 7_4:-47939200 Msa1158540:CDS
TCACCAGGATTCACAGTCAC+AGG 0.541793 7_4:+47937792 None:intergenic
TGTAGTTGTAGCAGCTGAAG+AGG 0.545993 7_4:+47939442 None:intergenic
GCTGAGCCTGAATTGAAGCC+AGG 0.546842 7_4:-47938339 Msa1158540:CDS
ACAGTCCATTCTAAAGTGGA+AGG 0.547893 7_4:+47939122 None:intergenic
TTTAGATTTAAGAGAAGAGG+TGG 0.556422 7_4:-47938486 Msa1158540:CDS
ACAGGCTCCAATATTGAAGC+AGG 0.556496 7_4:+47937810 None:intergenic
GCAAGAAAGGGTGAAAGGAA+AGG 0.556566 7_4:+47937685 None:intergenic
TGGATAACAAAGGATATATG+TGG 0.557176 7_4:-47939752 Msa1158540:five_prime_UTR
AGGGTGTGAGCAGTATGAGC+AGG 0.560744 7_4:+47938440 None:intergenic
CAATGAAAACCGAGTCTCAA+AGG 0.560884 7_4:-47938377 Msa1158540:CDS
TCAAGTAAACAAGTATACAT+AGG 0.564621 7_4:+47937593 None:intergenic
GTCCCTCTATCCTGTGAGCA+TGG 0.565166 7_4:-47938577 Msa1158540:CDS
CTCTACTCATCTTATTCTCA+AGG 0.565176 7_4:+47938283 None:intergenic
TGAAAAGGGGAAGCAAGAGG+AGG 0.568175 7_4:+47938420 None:intergenic
TGCCATGCTCACAGGATAGA+GGG 0.569663 7_4:+47938575 None:intergenic
AGCGATTGATTCTGTGTGGA+AGG 0.576921 7_4:+47939644 None:intergenic
ATGCTCATAATTTGTTTGTG+TGG 0.577668 7_4:-47939549 Msa1158540:five_prime_UTR
TTGGAAAGATGATGGACTTG+AGG 0.594368 7_4:-47939252 Msa1158540:CDS
CCAGGTTCATGGACTCAACA+AGG 0.611546 7_4:-47938321 Msa1158540:CDS
AGTGCCTCAGGAGTTGAAAG+AGG 0.618743 7_4:+47939416 None:intergenic
GGTCTTTACAAAGCTAAAGG+TGG 0.622769 7_4:-47939197 Msa1158540:CDS
TGGAGTCAAGATTTGAAAAG+GGG 0.631264 7_4:+47938407 None:intergenic
AAAGCCAAAATGGATAACAA+AGG 0.634430 7_4:-47939762 Msa1158540:five_prime_UTR
ATTTGAAAAGGGGAAGCAAG+AGG 0.647512 7_4:+47938417 None:intergenic
AACACCTCTTTCAACTCCTG+AGG 0.654317 7_4:-47939420 Msa1158540:CDS
CATGTCAGACAAATATGGGA+GGG 0.662782 7_4:-47937853 Msa1158540:CDS
ACCTCCCAAAGAAAGAACAA+AGG 0.664272 7_4:-47938250 Msa1158540:CDS
ATTTAAGAGAAGAGGTGGTG+CGG 0.665156 7_4:-47938481 Msa1158540:CDS
CCATGTCAGACAAATATGGG+AGG 0.669410 7_4:-47937854 Msa1158540:CDS
AATCCTGGTGAAGAATTCAG+AGG 0.670082 7_4:-47937780 Msa1158540:CDS
ATTTGTCTGACATGGAACCA+GGG 0.675047 7_4:+47937862 None:intergenic
TTGAATGAAGTATTACAACC+TGG 0.675139 7_4:-47939161 Msa1158540:CDS
GTCAAGCGATTGATTCTGTG+TGG 0.705706 7_4:+47939640 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACTATTCTATAAAA+AGG + chr7_4:47939294-47939313 None:intergenic 10.0%
!! AAAAAAACTATTCTATAAAA+AGG + chr7_4:47939294-47939313 None:intergenic 10.0%
!!! AATTGTAATAGAATACTTTT+TGG + chr7_4:47937668-47937687 None:intergenic 15.0%
!!! AATTGTAATAGAATACTTTT+TGG + chr7_4:47937668-47937687 None:intergenic 15.0%
!!! AATACTTTTTGGTTTGATTT+TGG + chr7_4:47937657-47937676 None:intergenic 20.0%
!!! TAATAAGGTACTTTTTTAAG+AGG + chr7_4:47937725-47937744 None:intergenic 20.0%
!!! GCTTTTATTAAGTTTAGTTT+GGG + chr7_4:47937785-47937804 None:intergenic 20.0%
!! AGAACATGAATTTATTATGT+TGG - chr7_4:47938231-47938250 Msa1158540:CDS 20.0%
!!! TCAATGATTTCATATTTTGA+AGG + chr7_4:47939039-47939058 None:intergenic 20.0%
!! AAAATATGAAATCATTGATC+AGG - chr7_4:47939041-47939060 Msa1158540:intron 20.0%
!!! ATAGTTTTTTTCTTTCTTTC+AGG - chr7_4:47939303-47939322 Msa1158540:CDS 20.0%
!!! TAGTTTTTTTCTTTCTTTCA+GGG - chr7_4:47939304-47939323 Msa1158540:CDS 20.0%
!! TATTGATATTCTTGTACTAT+AGG + chr7_4:47939686-47939705 None:intergenic 20.0%
!!! AATACTTTTTGGTTTGATTT+TGG + chr7_4:47937657-47937676 None:intergenic 20.0%
!!! TAATAAGGTACTTTTTTAAG+AGG + chr7_4:47937725-47937744 None:intergenic 20.0%
!!! GCTTTTATTAAGTTTAGTTT+GGG + chr7_4:47937785-47937804 None:intergenic 20.0%
!! AGAACATGAATTTATTATGT+TGG - chr7_4:47938231-47938250 Msa1158540:CDS 20.0%
!!! TCAATGATTTCATATTTTGA+AGG + chr7_4:47939039-47939058 None:intergenic 20.0%
!! AAAATATGAAATCATTGATC+AGG - chr7_4:47939041-47939060 Msa1158540:intron 20.0%
!!! ATAGTTTTTTTCTTTCTTTC+AGG - chr7_4:47939303-47939322 Msa1158540:CDS 20.0%
!!! TAGTTTTTTTCTTTCTTTCA+GGG - chr7_4:47939304-47939323 Msa1158540:CDS 20.0%
!! TATTGATATTCTTGTACTAT+AGG + chr7_4:47939686-47939705 None:intergenic 20.0%
!!! ATATCCTTTGTTATCCATTT+TGG + chr7_4:47937491-47937510 None:intergenic 25.0%
! TCAATCTAATAGTGTCAAAA+AGG + chr7_4:47937543-47937562 None:intergenic 25.0%
!! GGCTTTTATTAAGTTTAGTT+TGG + chr7_4:47937786-47937805 None:intergenic 25.0%
! AATGAGAAATTTGGAAGAAA+AGG - chr7_4:47937854-47937873 Msa1158540:CDS 25.0%
!! TAATCACATTTGAAGCAAAA+GGG + chr7_4:47938212-47938231 None:intergenic 25.0%
!!! ATTCGGAAATATGATTTGTT+TGG + chr7_4:47938468-47938487 None:intergenic 25.0%
! CTCTTCTCTTAAATCTAAAA+TGG + chr7_4:47938759-47938778 None:intergenic 25.0%
!! CATTTTAGATTTAAGAGAAG+AGG - chr7_4:47938757-47938776 Msa1158540:intron 25.0%
!!! ATGATTTCATATTTTGAAGG+CGG + chr7_4:47939036-47939055 None:intergenic 25.0%
!! CATATAAGATGATTTGTGAT+TGG - chr7_4:47939145-47939164 Msa1158540:CDS 25.0%
!!! AAATCGTTCTAGAACTTAAT+CGG + chr7_4:47939212-47939231 None:intergenic 25.0%
! CATGAAAAATTCCAAATGTT+TGG + chr7_4:47939252-47939271 None:intergenic 25.0%
! ATAAAAAAGAGAGCAAGAAA+GGG + chr7_4:47939576-47939595 None:intergenic 25.0%
! AATAAAAAAGAGAGCAAGAA+AGG + chr7_4:47939577-47939596 None:intergenic 25.0%
! TTCAGAAACACAAAAACTTA+TGG + chr7_4:47939613-47939632 None:intergenic 25.0%
! TCAAGTAAACAAGTATACAT+AGG + chr7_4:47939656-47939675 None:intergenic 25.0%
!!! ATATCCTTTGTTATCCATTT+TGG + chr7_4:47937491-47937510 None:intergenic 25.0%
! TCAATCTAATAGTGTCAAAA+AGG + chr7_4:47937543-47937562 None:intergenic 25.0%
!! GGCTTTTATTAAGTTTAGTT+TGG + chr7_4:47937786-47937805 None:intergenic 25.0%
! AATGAGAAATTTGGAAGAAA+AGG - chr7_4:47937854-47937873 Msa1158540:CDS 25.0%
!! TAATCACATTTGAAGCAAAA+GGG + chr7_4:47938212-47938231 None:intergenic 25.0%
!!! ATTCGGAAATATGATTTGTT+TGG + chr7_4:47938468-47938487 None:intergenic 25.0%
! CTCTTCTCTTAAATCTAAAA+TGG + chr7_4:47938759-47938778 None:intergenic 25.0%
!! CATTTTAGATTTAAGAGAAG+AGG - chr7_4:47938757-47938776 Msa1158540:intron 25.0%
!!! ATGATTTCATATTTTGAAGG+CGG + chr7_4:47939036-47939055 None:intergenic 25.0%
!! CATATAAGATGATTTGTGAT+TGG - chr7_4:47939145-47939164 Msa1158540:CDS 25.0%
!!! AAATCGTTCTAGAACTTAAT+CGG + chr7_4:47939212-47939231 None:intergenic 25.0%
! CATGAAAAATTCCAAATGTT+TGG + chr7_4:47939252-47939271 None:intergenic 25.0%
! ATAAAAAAGAGAGCAAGAAA+GGG + chr7_4:47939576-47939595 None:intergenic 25.0%
! AATAAAAAAGAGAGCAAGAA+AGG + chr7_4:47939577-47939596 None:intergenic 25.0%
! TTCAGAAACACAAAAACTTA+TGG + chr7_4:47939613-47939632 None:intergenic 25.0%
! TCAAGTAAACAAGTATACAT+AGG + chr7_4:47939656-47939675 None:intergenic 25.0%
AAAGCCAAAATGGATAACAA+AGG - chr7_4:47937484-47937503 Msa1158540:three_prime_UTR 30.0%
TGGATAACAAAGGATATATG+TGG - chr7_4:47937494-47937513 Msa1158540:three_prime_UTR 30.0%
AACATGAATTTCCTTCTTTG+AGG - chr7_4:47937629-47937648 Msa1158540:three_prime_UTR 30.0%
!! ATGCTCATAATTTGTTTGTG+TGG - chr7_4:47937697-47937716 Msa1158540:three_prime_UTR 30.0%
! ACCTTATTACGTTTTCTCTA+TGG - chr7_4:47937736-47937755 Msa1158540:exon 30.0%
!! AAGAAAAGGCATCAAATTCT+TGG - chr7_4:47937868-47937887 Msa1158540:CDS 30.0%
!!! CTTACAAACCAAAAGTGTTT+TGG - chr7_4:47937975-47937994 Msa1158540:intron 30.0%
! TCATCTTTCCAAAACACTTT+TGG + chr7_4:47937986-47938005 None:intergenic 30.0%
!!! AAAGTGTTTTGGAAAGATGA+TGG - chr7_4:47937986-47938005 Msa1158540:intron 30.0%
TTTGTAAAGACCTGTTTCAT+TGG + chr7_4:47938041-47938060 None:intergenic 30.0%
! TTGAATGAAGTATTACAACC+TGG - chr7_4:47938085-47938104 Msa1158540:intron 30.0%
! CTAATCACATTTGAAGCAAA+AGG + chr7_4:47938213-47938232 None:intergenic 30.0%
CAGAAGCTAATTATACGTTA+AGG + chr7_4:47938319-47938338 None:intergenic 30.0%
!! AATGCATTGATTGTGCTAAA+TGG + chr7_4:47938507-47938526 None:intergenic 30.0%
GAAAGTGAAATACTGAAACT+TGG - chr7_4:47938563-47938582 Msa1158540:CDS 30.0%
AAAATGGCTTAGTATAGCAT+TGG + chr7_4:47938743-47938762 None:intergenic 30.0%
TTTAGATTTAAGAGAAGAGG+TGG - chr7_4:47938760-47938779 Msa1158540:intron 30.0%
ATGGAGTCAAGATTTGAAAA+GGG + chr7_4:47938843-47938862 None:intergenic 30.0%
! TCTCAAAGGTTGATTTCATT+TGG - chr7_4:47938883-47938902 Msa1158540:intron 30.0%
TTATTCTCAAGGAGAGTAAT+AGG + chr7_4:47938955-47938974 None:intergenic 30.0%
AAAGCCTTTGTTCTTTCTTT+GGG + chr7_4:47939003-47939022 None:intergenic 30.0%
AAAAGCCTTTGTTCTTTCTT+TGG + chr7_4:47939004-47939023 None:intergenic 30.0%
!! TTCTAGAACGATTTACATTG+TGG - chr7_4:47939218-47939237 Msa1158540:CDS 30.0%
AAAAGGCTTCACTCAATAAT+TGG + chr7_4:47939277-47939296 None:intergenic 30.0%
TTTCTACAGAGTGATAAGAA+TGG - chr7_4:47939336-47939355 Msa1158540:CDS 30.0%
TTCTACAGAGTGATAAGAAT+GGG - chr7_4:47939337-47939356 Msa1158540:CDS 30.0%
!!! CATTTTGGCTTTTTTTCCTT+GGG + chr7_4:47937476-47937495 None:intergenic 30.0%
AAAGCCAAAATGGATAACAA+AGG - chr7_4:47937484-47937503 Msa1158540:three_prime_UTR 30.0%
TGGATAACAAAGGATATATG+TGG - chr7_4:47937494-47937513 Msa1158540:three_prime_UTR 30.0%
AACATGAATTTCCTTCTTTG+AGG - chr7_4:47937629-47937648 Msa1158540:three_prime_UTR 30.0%
!! ATGCTCATAATTTGTTTGTG+TGG - chr7_4:47937697-47937716 Msa1158540:three_prime_UTR 30.0%
! ACCTTATTACGTTTTCTCTA+TGG - chr7_4:47937736-47937755 Msa1158540:exon 30.0%
!! AAGAAAAGGCATCAAATTCT+TGG - chr7_4:47937868-47937887 Msa1158540:CDS 30.0%
!!! CTTACAAACCAAAAGTGTTT+TGG - chr7_4:47937975-47937994 Msa1158540:intron 30.0%
! TCATCTTTCCAAAACACTTT+TGG + chr7_4:47937986-47938005 None:intergenic 30.0%
!!! AAAGTGTTTTGGAAAGATGA+TGG - chr7_4:47937986-47938005 Msa1158540:intron 30.0%
TTTGTAAAGACCTGTTTCAT+TGG + chr7_4:47938041-47938060 None:intergenic 30.0%
! TTGAATGAAGTATTACAACC+TGG - chr7_4:47938085-47938104 Msa1158540:intron 30.0%
! CTAATCACATTTGAAGCAAA+AGG + chr7_4:47938213-47938232 None:intergenic 30.0%
CAGAAGCTAATTATACGTTA+AGG + chr7_4:47938319-47938338 None:intergenic 30.0%
!! AATGCATTGATTGTGCTAAA+TGG + chr7_4:47938507-47938526 None:intergenic 30.0%
GAAAGTGAAATACTGAAACT+TGG - chr7_4:47938563-47938582 Msa1158540:CDS 30.0%
AAAATGGCTTAGTATAGCAT+TGG + chr7_4:47938743-47938762 None:intergenic 30.0%
TTTAGATTTAAGAGAAGAGG+TGG - chr7_4:47938760-47938779 Msa1158540:intron 30.0%
ATGGAGTCAAGATTTGAAAA+GGG + chr7_4:47938843-47938862 None:intergenic 30.0%
! TCTCAAAGGTTGATTTCATT+TGG - chr7_4:47938883-47938902 Msa1158540:intron 30.0%
TTATTCTCAAGGAGAGTAAT+AGG + chr7_4:47938955-47938974 None:intergenic 30.0%
AAAGCCTTTGTTCTTTCTTT+GGG + chr7_4:47939003-47939022 None:intergenic 30.0%
AAAAGCCTTTGTTCTTTCTT+TGG + chr7_4:47939004-47939023 None:intergenic 30.0%
!! TTCTAGAACGATTTACATTG+TGG - chr7_4:47939218-47939237 Msa1158540:CDS 30.0%
AAAAGGCTTCACTCAATAAT+TGG + chr7_4:47939277-47939296 None:intergenic 30.0%
TTTCTACAGAGTGATAAGAA+TGG - chr7_4:47939336-47939355 Msa1158540:CDS 30.0%
TTCTACAGAGTGATAAGAAT+GGG - chr7_4:47939337-47939356 Msa1158540:CDS 30.0%
!!! CCATTTTGGCTTTTTTTCCT+TGG + chr7_4:47937477-47937496 None:intergenic 35.0%
CCAAGGAAAAAAAGCCAAAA+TGG - chr7_4:47937474-47937493 Msa1158540:three_prime_UTR 35.0%
ACATGTTTGCATTGAACTCA+TGG + chr7_4:47937582-47937601 None:intergenic 35.0%
!!! TGATTTTGGTTCCTCAAAGA+AGG + chr7_4:47937643-47937662 None:intergenic 35.0%
GCCATAGAGAAAACGTAATA+AGG + chr7_4:47937740-47937759 None:intergenic 35.0%
!! GTTTAGTTTGGGAAGAGATA+AGG + chr7_4:47937774-47937793 None:intergenic 35.0%
CTAACTGTTAGCTCAACAAT+GGG + chr7_4:47937908-47937927 None:intergenic 35.0%
TCTAACTGTTAGCTCAACAA+TGG + chr7_4:47937909-47937928 None:intergenic 35.0%
GTTGAGCTAACAGTTAGAAA+TGG - chr7_4:47937911-47937930 Msa1158540:CDS 35.0%
TAAGATGTTACATGAGCATC+AGG + chr7_4:47937959-47937978 None:intergenic 35.0%
ACAGGTCTTTACAAAGCTAA+AGG - chr7_4:47938046-47938065 Msa1158540:intron 35.0%
TACAAAGCTAAAGGTGGAAT+TGG - chr7_4:47938055-47938074 Msa1158540:intron 35.0%
! CTTTACAGTCCATTCTAAAG+TGG + chr7_4:47938131-47938150 None:intergenic 35.0%
!! CACTTTAGAATGGACTGTAA+AGG - chr7_4:47938129-47938148 Msa1158540:intron 35.0%
! TTGTACCTGTAAAGCATCAA+TGG + chr7_4:47938170-47938189 None:intergenic 35.0%
! CTTGGCTAGAATTGATTCTA+GGG + chr7_4:47938282-47938301 None:intergenic 35.0%
! ACTTGGCTAGAATTGATTCT+AGG + chr7_4:47938283-47938302 None:intergenic 35.0%
TCAATTCTAGCCAAGTTTCT+TGG - chr7_4:47938287-47938306 Msa1158540:CDS 35.0%
! TAGCTTTTGCATTTTCACGT+TGG + chr7_4:47938386-47938405 None:intergenic 35.0%
! TAGAAATTGTCACTTCAAGC+TGG - chr7_4:47938404-47938423 Msa1158540:CDS 35.0%
GTATGATGAAACTGGTGATT+CGG + chr7_4:47938485-47938504 None:intergenic 35.0%
GCTAAATGGTATGATGAAAC+TGG + chr7_4:47938493-47938512 None:intergenic 35.0%
! TTGGTTAGAGTAACAGGTTT+TGG + chr7_4:47938724-47938743 None:intergenic 35.0%
!! ATAGCATTGGTTAGAGTAAC+AGG + chr7_4:47938730-47938749 None:intergenic 35.0%
TGGAGTCAAGATTTGAAAAG+GGG + chr7_4:47938842-47938861 None:intergenic 35.0%
GATGGAGTCAAGATTTGAAA+AGG + chr7_4:47938844-47938863 None:intergenic 35.0%
!! TGAAATCAACCTTTGAGACT+CGG + chr7_4:47938881-47938900 None:intergenic 35.0%
CTCTACTCATCTTATTCTCA+AGG + chr7_4:47938966-47938985 None:intergenic 35.0%
AGTGATAAGAATGGGATTTG+AGG - chr7_4:47939345-47939364 Msa1158540:CDS 35.0%
GTTCCATGTCAGACAAATAT+GGG - chr7_4:47939389-47939408 Msa1158540:CDS 35.0%
!!! AGTTTTTGTGTTTCTGAAGC+AGG - chr7_4:47939615-47939634 Msa1158540:five_prime_UTR 35.0%
! AGAAGTAGTTTTCATCATCG+AGG + chr7_4:47939774-47939793 None:intergenic 35.0%
!!! CCATTTTGGCTTTTTTTCCT+TGG + chr7_4:47937477-47937496 None:intergenic 35.0%
CCAAGGAAAAAAAGCCAAAA+TGG - chr7_4:47937474-47937493 Msa1158540:three_prime_UTR 35.0%
ACATGTTTGCATTGAACTCA+TGG + chr7_4:47937582-47937601 None:intergenic 35.0%
!!! TGATTTTGGTTCCTCAAAGA+AGG + chr7_4:47937643-47937662 None:intergenic 35.0%
GCCATAGAGAAAACGTAATA+AGG + chr7_4:47937740-47937759 None:intergenic 35.0%
!! GTTTAGTTTGGGAAGAGATA+AGG + chr7_4:47937774-47937793 None:intergenic 35.0%
CTAACTGTTAGCTCAACAAT+GGG + chr7_4:47937908-47937927 None:intergenic 35.0%
TCTAACTGTTAGCTCAACAA+TGG + chr7_4:47937909-47937928 None:intergenic 35.0%
GTTGAGCTAACAGTTAGAAA+TGG - chr7_4:47937911-47937930 Msa1158540:CDS 35.0%
TAAGATGTTACATGAGCATC+AGG + chr7_4:47937959-47937978 None:intergenic 35.0%
ACAGGTCTTTACAAAGCTAA+AGG - chr7_4:47938046-47938065 Msa1158540:intron 35.0%
TACAAAGCTAAAGGTGGAAT+TGG - chr7_4:47938055-47938074 Msa1158540:intron 35.0%
! CTTTACAGTCCATTCTAAAG+TGG + chr7_4:47938131-47938150 None:intergenic 35.0%
!! CACTTTAGAATGGACTGTAA+AGG - chr7_4:47938129-47938148 Msa1158540:intron 35.0%
! TTGTACCTGTAAAGCATCAA+TGG + chr7_4:47938170-47938189 None:intergenic 35.0%
! CTTGGCTAGAATTGATTCTA+GGG + chr7_4:47938282-47938301 None:intergenic 35.0%
! ACTTGGCTAGAATTGATTCT+AGG + chr7_4:47938283-47938302 None:intergenic 35.0%
TCAATTCTAGCCAAGTTTCT+TGG - chr7_4:47938287-47938306 Msa1158540:CDS 35.0%
! TAGCTTTTGCATTTTCACGT+TGG + chr7_4:47938386-47938405 None:intergenic 35.0%
! TAGAAATTGTCACTTCAAGC+TGG - chr7_4:47938404-47938423 Msa1158540:CDS 35.0%
GTATGATGAAACTGGTGATT+CGG + chr7_4:47938485-47938504 None:intergenic 35.0%
GCTAAATGGTATGATGAAAC+TGG + chr7_4:47938493-47938512 None:intergenic 35.0%
! TTGGTTAGAGTAACAGGTTT+TGG + chr7_4:47938724-47938743 None:intergenic 35.0%
!! ATAGCATTGGTTAGAGTAAC+AGG + chr7_4:47938730-47938749 None:intergenic 35.0%
TGGAGTCAAGATTTGAAAAG+GGG + chr7_4:47938842-47938861 None:intergenic 35.0%
GATGGAGTCAAGATTTGAAA+AGG + chr7_4:47938844-47938863 None:intergenic 35.0%
!! TGAAATCAACCTTTGAGACT+CGG + chr7_4:47938881-47938900 None:intergenic 35.0%
CTCTACTCATCTTATTCTCA+AGG + chr7_4:47938966-47938985 None:intergenic 35.0%
AGTGATAAGAATGGGATTTG+AGG - chr7_4:47939345-47939364 Msa1158540:CDS 35.0%
GTTCCATGTCAGACAAATAT+GGG - chr7_4:47939389-47939408 Msa1158540:CDS 35.0%
!!! AGTTTTTGTGTTTCTGAAGC+AGG - chr7_4:47939615-47939634 Msa1158540:five_prime_UTR 35.0%
! AGAAGTAGTTTTCATCATCG+AGG + chr7_4:47939774-47939793 None:intergenic 35.0%
TTGAACTCATGGCTTACTCT+TGG + chr7_4:47937571-47937590 None:intergenic 40.0%
AATTTCTCATTGAGTGCCTC+AGG + chr7_4:47937845-47937864 None:intergenic 40.0%
! GAGGCACTCAATGAGAAATT+TGG - chr7_4:47937845-47937864 Msa1158540:CDS 40.0%
!! TTGGAAAGATGATGGACTTG+AGG - chr7_4:47937994-47938013 Msa1158540:intron 40.0%
ACAATTCCTGCCAATGAAAC+AGG - chr7_4:47938028-47938047 Msa1158540:intron 40.0%
TAAAGACCTGTTTCATTGGC+AGG + chr7_4:47938037-47938056 None:intergenic 40.0%
GGTCTTTACAAAGCTAAAGG+TGG - chr7_4:47938049-47938068 Msa1158540:intron 40.0%
AGCTAAAGGTGGAATTGGTT+TGG - chr7_4:47938060-47938079 Msa1158540:intron 40.0%
! TGCTTCCTTCCACTTTAGAA+TGG - chr7_4:47938119-47938138 Msa1158540:intron 40.0%
!! ACAGTCCATTCTAAAGTGGA+AGG + chr7_4:47938127-47938146 None:intergenic 40.0%
TGATGCCATTGATGCTTTAC+AGG - chr7_4:47938162-47938181 Msa1158540:intron 40.0%
TCAACCTGCAGAAAAGTGAA+TGG + chr7_4:47938607-47938626 None:intergenic 40.0%
ATTTAAGAGAAGAGGTGGTG+CGG - chr7_4:47938765-47938784 Msa1158540:intron 40.0%
ATTTGAAAAGGGGAAGCAAG+AGG + chr7_4:47938832-47938851 None:intergenic 40.0%
! TCGGTTTTCATTGCTTCTGA+TGG + chr7_4:47938862-47938881 None:intergenic 40.0%
CAATGAAAACCGAGTCTCAA+AGG - chr7_4:47938869-47938888 Msa1158540:intron 40.0%
ACCTCCCAAAGAAAGAACAA+AGG - chr7_4:47938996-47939015 Msa1158540:intron 40.0%
ATTTGTCTGACATGGAACCA+GGG + chr7_4:47939387-47939406 None:intergenic 40.0%
TATTTGTCTGACATGGAACC+AGG + chr7_4:47939388-47939407 None:intergenic 40.0%
GGTTCCATGTCAGACAAATA+TGG - chr7_4:47939388-47939407 Msa1158540:CDS 40.0%
CATGTCAGACAAATATGGGA+GGG - chr7_4:47939393-47939412 Msa1158540:CDS 40.0%
! AGGGACTATTTTGTATGCAC+TGG - chr7_4:47939412-47939431 Msa1158540:CDS 40.0%
AATCCTGGTGAAGAATTCAG+AGG - chr7_4:47939466-47939485 Msa1158540:CDS 40.0%
CATTGAATCCCTTAGCACTT+TGG - chr7_4:47939746-47939765 Msa1158540:five_prime_UTR 40.0%
TTGAACTCATGGCTTACTCT+TGG + chr7_4:47937571-47937590 None:intergenic 40.0%
AATTTCTCATTGAGTGCCTC+AGG + chr7_4:47937845-47937864 None:intergenic 40.0%
! GAGGCACTCAATGAGAAATT+TGG - chr7_4:47937845-47937864 Msa1158540:CDS 40.0%
!! TTGGAAAGATGATGGACTTG+AGG - chr7_4:47937994-47938013 Msa1158540:intron 40.0%
ACAATTCCTGCCAATGAAAC+AGG - chr7_4:47938028-47938047 Msa1158540:intron 40.0%
TAAAGACCTGTTTCATTGGC+AGG + chr7_4:47938037-47938056 None:intergenic 40.0%
GGTCTTTACAAAGCTAAAGG+TGG - chr7_4:47938049-47938068 Msa1158540:intron 40.0%
AGCTAAAGGTGGAATTGGTT+TGG - chr7_4:47938060-47938079 Msa1158540:intron 40.0%
! TGCTTCCTTCCACTTTAGAA+TGG - chr7_4:47938119-47938138 Msa1158540:intron 40.0%
!! ACAGTCCATTCTAAAGTGGA+AGG + chr7_4:47938127-47938146 None:intergenic 40.0%
TGATGCCATTGATGCTTTAC+AGG - chr7_4:47938162-47938181 Msa1158540:intron 40.0%
TCAACCTGCAGAAAAGTGAA+TGG + chr7_4:47938607-47938626 None:intergenic 40.0%
ATTTAAGAGAAGAGGTGGTG+CGG - chr7_4:47938765-47938784 Msa1158540:intron 40.0%
ATTTGAAAAGGGGAAGCAAG+AGG + chr7_4:47938832-47938851 None:intergenic 40.0%
! TCGGTTTTCATTGCTTCTGA+TGG + chr7_4:47938862-47938881 None:intergenic 40.0%
CAATGAAAACCGAGTCTCAA+AGG - chr7_4:47938869-47938888 Msa1158540:intron 40.0%
ACCTCCCAAAGAAAGAACAA+AGG - chr7_4:47938996-47939015 Msa1158540:intron 40.0%
ATTTGTCTGACATGGAACCA+GGG + chr7_4:47939387-47939406 None:intergenic 40.0%
TATTTGTCTGACATGGAACC+AGG + chr7_4:47939388-47939407 None:intergenic 40.0%
GGTTCCATGTCAGACAAATA+TGG - chr7_4:47939388-47939407 Msa1158540:CDS 40.0%
CATGTCAGACAAATATGGGA+GGG - chr7_4:47939393-47939412 Msa1158540:CDS 40.0%
! AGGGACTATTTTGTATGCAC+TGG - chr7_4:47939412-47939431 Msa1158540:CDS 40.0%
AATCCTGGTGAAGAATTCAG+AGG - chr7_4:47939466-47939485 Msa1158540:CDS 40.0%
CATTGAATCCCTTAGCACTT+TGG - chr7_4:47939746-47939765 Msa1158540:five_prime_UTR 40.0%
ACTCATGGCTTACTCTTGGA+TGG + chr7_4:47937567-47937586 None:intergenic 45.0%
! AGCGATTGATTCTGTGTGGA+AGG + chr7_4:47937605-47937624 None:intergenic 45.0%
! GTCAAGCGATTGATTCTGTG+TGG + chr7_4:47937609-47937628 None:intergenic 45.0%
TGTAGTTGTAGCAGCTGAAG+AGG + chr7_4:47937807-47937826 None:intergenic 45.0%
AACACCTCTTTCAACTCCTG+AGG - chr7_4:47937826-47937845 Msa1158540:CDS 45.0%
AAGGCAGAAGCCAAGAAACT+TGG + chr7_4:47938300-47938319 None:intergenic 45.0%
!! TTTCACGTTGGAGAGTGCTT+TGG + chr7_4:47938374-47938393 None:intergenic 45.0%
!! GCTTCCATTCACTTTTCTGC+AGG - chr7_4:47938600-47938619 Msa1158540:CDS 45.0%
CATGAACCTGGCTTCAATTC+AGG + chr7_4:47938916-47938935 None:intergenic 45.0%
CTGAATTGAAGCCAGGTTCA+TGG - chr7_4:47938914-47938933 Msa1158540:intron 45.0%
GCCTTTGTTCTTTCTTTGGG+AGG + chr7_4:47939000-47939019 None:intergenic 45.0%
TGGACACGTGACCAAACATT+TGG - chr7_4:47939238-47939257 Msa1158540:CDS 45.0%
GATATTTACGTGTCAAGCCC+TGG - chr7_4:47939367-47939386 Msa1158540:CDS 45.0%
CCTCCCATATTTGTCTGACA+TGG + chr7_4:47939395-47939414 None:intergenic 45.0%
CCATGTCAGACAAATATGGG+AGG - chr7_4:47939392-47939411 Msa1158540:CDS 45.0%
CACTGGTCCTGCTTCAATAT+TGG - chr7_4:47939429-47939448 Msa1158540:CDS 45.0%
ACAGGCTCCAATATTGAAGC+AGG + chr7_4:47939439-47939458 None:intergenic 45.0%
GCAAGAAAGGGTGAAAGGAA+AGG + chr7_4:47939564-47939583 None:intergenic 45.0%
AGAGAGCAAGAAAGGGTGAA+AGG + chr7_4:47939569-47939588 None:intergenic 45.0%
! TCGAGGAACCAAAGTGCTAA+GGG + chr7_4:47939757-47939776 None:intergenic 45.0%
! ATCGAGGAACCAAAGTGCTA+AGG + chr7_4:47939758-47939777 None:intergenic 45.0%
ACTCATGGCTTACTCTTGGA+TGG + chr7_4:47937567-47937586 None:intergenic 45.0%
! AGCGATTGATTCTGTGTGGA+AGG + chr7_4:47937605-47937624 None:intergenic 45.0%
! GTCAAGCGATTGATTCTGTG+TGG + chr7_4:47937609-47937628 None:intergenic 45.0%
TGTAGTTGTAGCAGCTGAAG+AGG + chr7_4:47937807-47937826 None:intergenic 45.0%
AACACCTCTTTCAACTCCTG+AGG - chr7_4:47937826-47937845 Msa1158540:CDS 45.0%
AAGGCAGAAGCCAAGAAACT+TGG + chr7_4:47938300-47938319 None:intergenic 45.0%
!! TTTCACGTTGGAGAGTGCTT+TGG + chr7_4:47938374-47938393 None:intergenic 45.0%
!! GCTTCCATTCACTTTTCTGC+AGG - chr7_4:47938600-47938619 Msa1158540:CDS 45.0%
CATGAACCTGGCTTCAATTC+AGG + chr7_4:47938916-47938935 None:intergenic 45.0%
CTGAATTGAAGCCAGGTTCA+TGG - chr7_4:47938914-47938933 Msa1158540:intron 45.0%
GCCTTTGTTCTTTCTTTGGG+AGG + chr7_4:47939000-47939019 None:intergenic 45.0%
TGGACACGTGACCAAACATT+TGG - chr7_4:47939238-47939257 Msa1158540:CDS 45.0%
GATATTTACGTGTCAAGCCC+TGG - chr7_4:47939367-47939386 Msa1158540:CDS 45.0%
CCTCCCATATTTGTCTGACA+TGG + chr7_4:47939395-47939414 None:intergenic 45.0%
CCATGTCAGACAAATATGGG+AGG - chr7_4:47939392-47939411 Msa1158540:CDS 45.0%
CACTGGTCCTGCTTCAATAT+TGG - chr7_4:47939429-47939448 Msa1158540:CDS 45.0%
ACAGGCTCCAATATTGAAGC+AGG + chr7_4:47939439-47939458 None:intergenic 45.0%
GCAAGAAAGGGTGAAAGGAA+AGG + chr7_4:47939564-47939583 None:intergenic 45.0%
AGAGAGCAAGAAAGGGTGAA+AGG + chr7_4:47939569-47939588 None:intergenic 45.0%
! TCGAGGAACCAAAGTGCTAA+GGG + chr7_4:47939757-47939776 None:intergenic 45.0%
! ATCGAGGAACCAAAGTGCTA+AGG + chr7_4:47939758-47939777 None:intergenic 45.0%
AGTGCCTCAGGAGTTGAAAG+AGG + chr7_4:47937833-47937852 None:intergenic 50.0%
! GGAAGCAACTCTTTTGCACC+AGG + chr7_4:47938106-47938125 None:intergenic 50.0%
TGCCATGCTCACAGGATAGA+GGG + chr7_4:47938674-47938693 None:intergenic 50.0%
TTGCCATGCTCACAGGATAG+AGG + chr7_4:47938675-47938694 None:intergenic 50.0%
AGAGGTGGTGCGGCAATTAA+AGG - chr7_4:47938775-47938794 Msa1158540:intron 50.0%
GAAAAGGGGAAGCAAGAGGA+GGG + chr7_4:47938828-47938847 None:intergenic 50.0%
TGAAAAGGGGAAGCAAGAGG+AGG + chr7_4:47938829-47938848 None:intergenic 50.0%
CCTTGTTGAGTCCATGAACC+TGG + chr7_4:47938928-47938947 None:intergenic 50.0%
CCAGGTTCATGGACTCAACA+AGG - chr7_4:47938925-47938944 Msa1158540:intron 50.0%
TCACCAGGATTCACAGTCAC+AGG + chr7_4:47939457-47939476 None:intergenic 50.0%
GCTCCTCTGAATTCTTCACC+AGG + chr7_4:47939472-47939491 None:intergenic 50.0%
AGTGCCTCAGGAGTTGAAAG+AGG + chr7_4:47937833-47937852 None:intergenic 50.0%
! GGAAGCAACTCTTTTGCACC+AGG + chr7_4:47938106-47938125 None:intergenic 50.0%
TGCCATGCTCACAGGATAGA+GGG + chr7_4:47938674-47938693 None:intergenic 50.0%
TTGCCATGCTCACAGGATAG+AGG + chr7_4:47938675-47938694 None:intergenic 50.0%
AGAGGTGGTGCGGCAATTAA+AGG - chr7_4:47938775-47938794 Msa1158540:intron 50.0%
GAAAAGGGGAAGCAAGAGGA+GGG + chr7_4:47938828-47938847 None:intergenic 50.0%
TGAAAAGGGGAAGCAAGAGG+AGG + chr7_4:47938829-47938848 None:intergenic 50.0%
CCTTGTTGAGTCCATGAACC+TGG + chr7_4:47938928-47938947 None:intergenic 50.0%
CCAGGTTCATGGACTCAACA+AGG - chr7_4:47938925-47938944 Msa1158540:intron 50.0%
TCACCAGGATTCACAGTCAC+AGG + chr7_4:47939457-47939476 None:intergenic 50.0%
GCTCCTCTGAATTCTTCACC+AGG + chr7_4:47939472-47939491 None:intergenic 50.0%
!! AGCTGGACGTGAGAGTGCTT+TGG - chr7_4:47938421-47938440 Msa1158540:CDS 55.0%
GTCCCTCTATCCTGTGAGCA+TGG - chr7_4:47938669-47938688 Msa1158540:intron 55.0%
ACTGCTGTTGCCATGCTCAC+AGG + chr7_4:47938682-47938701 None:intergenic 55.0%
AGGGTGTGAGCAGTATGAGC+AGG + chr7_4:47938809-47938828 None:intergenic 55.0%
GCTGAGCCTGAATTGAAGCC+AGG - chr7_4:47938907-47938926 Msa1158540:intron 55.0%
GAGCCTGTGACTGTGAATCC+TGG - chr7_4:47939451-47939470 Msa1158540:CDS 55.0%
!! AGCTGGACGTGAGAGTGCTT+TGG - chr7_4:47938421-47938440 Msa1158540:CDS 55.0%
GTCCCTCTATCCTGTGAGCA+TGG - chr7_4:47938669-47938688 Msa1158540:intron 55.0%
ACTGCTGTTGCCATGCTCAC+AGG + chr7_4:47938682-47938701 None:intergenic 55.0%
AGGGTGTGAGCAGTATGAGC+AGG + chr7_4:47938809-47938828 None:intergenic 55.0%
GCTGAGCCTGAATTGAAGCC+AGG - chr7_4:47938907-47938926 Msa1158540:intron 55.0%
GAGCCTGTGACTGTGAATCC+TGG - chr7_4:47939451-47939470 Msa1158540:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 47937474 47939794 47937474 ID=Msa1158540;Name=Msa1158540
chr7_4 mRNA 47937474 47939794 47937474 ID=Msa1158540-mRNA-1;Parent=Msa1158540;Name=Msa1158540-mRNA-1;_AED=0.01;_eAED=0.01;_QI=281|1|1|1|1|1|3|272|355
chr7_4 exon 47937474 47937943 47937474 ID=Msa1158540-mRNA-1:exon:12867;Parent=Msa1158540-mRNA-1
chr7_4 exon 47938206 47938646 47938206 ID=Msa1158540-mRNA-1:exon:12866;Parent=Msa1158540-mRNA-1
chr7_4 exon 47939085 47939794 47939085 ID=Msa1158540-mRNA-1:exon:12865;Parent=Msa1158540-mRNA-1
chr7_4 five_prime_UTR 47939514 47939794 47939514 ID=Msa1158540-mRNA-1:five_prime_utr;Parent=Msa1158540-mRNA-1
chr7_4 CDS 47939085 47939513 47939085 ID=Msa1158540-mRNA-1:cds;Parent=Msa1158540-mRNA-1
chr7_4 CDS 47938206 47938646 47938206 ID=Msa1158540-mRNA-1:cds;Parent=Msa1158540-mRNA-1
chr7_4 CDS 47937746 47937943 47937746 ID=Msa1158540-mRNA-1:cds;Parent=Msa1158540-mRNA-1
chr7_4 three_prime_UTR 47937474 47937745 47937474 ID=Msa1158540-mRNA-1:three_prime_utr;Parent=Msa1158540-mRNA-1
Gene Sequence

>Msa1158540

ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAAACTAAACTTAATAAAAGCCTCTTCAGCTGCTACAACTACAACACCTCTTTCAACTCCTGAGGCACTCAATGAGAAATTTGGAAGAAAAGGCATCAAATTCTTGGAGTCTAACAGCATTCCCATTGTTGAGCTAACAGTTAGAAATGGAAGCTCATTGAGCTTAAGATTACCTGATGCTCATGTAACATCTTACAAACCAAAAGTGTTTTGGAAAGATGATGGACTTGAGGAGCTTCTTTACACAATTCCTGCCAATGAAACAGGTCTTTACAAAGCTAAAGGTGGAATTGGTTTGGTCTTGAATGAAGTATTACAACCTGGTGCAAAAGAGTTGCTTCCTTCCACTTTAGAATGGACTGTAAAGGATGTTGACTATGATGCCATTGATGCTTTACAGGTTGAATTGATCAGCACTAATAGATTTTTTGACATGACTTATATTGTGTCCCTCTATCCTGTGAGCATGGCAACAGCAGTTATAGTTAAGAACAAATCTCCAAAACCTGTTACTCTAACCAATGCTATACTAAGCCATTTTAGATTTAAGAGAAGAGGTGGTGCGGCAATTAAAGGTCTTCAAACCTGCTCATACTGCTCACACCCTCCTCTTGCTTCCCCTTTTCAAATCTTGACTCCATCAGAAGCAATGAAAACCGAGTCTCAAAGGTTGATTTCATTTGGTGCTGAGCCTGAATTGAAGCCAGGTTCATGGACTCAACAAGGTGTTCCTATTACTCTCCTTGAGAATAAGATGAGTAGAGTTTTTGCTGCACCTCCCAAAGAAAGAACAAAGGCTTTTTATAACACACCGCCTTCAAAATATGAAATCATTGATCAGGGACGTGAGATTTTCTACAGAGTGATAAGAATGGGATTTGAGGATATTTACGTGTCAAGCCCTGGTTCCATGTCAGACAAATATGGGAGGGACTATTTTGTATGCACTGGTCCTGCTTCAATATTGGAGCCTGTGACTGTGAATCCTGGTGAAGAATTCAGAGGAGCACAAGTTATTGAGCATGATAATCTCTCATAA

Protein sequence

>Msa1158540

MASFLSLSLPKLNLIKASSAATTTTPLSTPEALNEKFGRKGIKFLESNSIPIVELTVRNGSSLSLRLPDAHVTSYKPKVFWKDDGLEELLYTIPANETGLYKAKGGIGLVLNEVLQPGAKELLPSTLEWTVKDVDYDAIDALQVELISTNRFFDMTYIVSLYPVSMATAVIVKNKSPKPVTLTNAILSHFRFKRRGGAAIKGLQTCSYCSHPPLASPFQILTPSEAMKTESQRLISFGAEPELKPGSWTQQGVPITLLENKMSRVFAAPPKERTKAFYNTPPSKYEIIDQGREIFYRVIRMGFEDIYVSSPGSMSDKYGRDYFVCTGPASILEPVTVNPGEEFRGAQVIEHDNLS*